diff --git a/ecephys_spike_sorting/scripts/sglx_multi_run_pipeline.py b/ecephys_spike_sorting/scripts/sglx_multi_run_pipeline.py
index c8e44dc9..c6d022d9 100644
--- a/ecephys_spike_sorting/scripts/sglx_multi_run_pipeline.py
+++ b/ecephys_spike_sorting/scripts/sglx_multi_run_pipeline.py
@@ -365,6 +365,7 @@
                                            spikeGLX_data = True,
                                            input_meta_path = input_meta_fullpath,
                                            catGT_run_name = spec[0],
+                                           gate_string = spec[1],
     									   kilosort_output_directory=kilosort_output_dir,
                                            extracted_data_directory = catGT_dest,
                                            tPrime_im_ex_list = im_ex_list,