tagmapAnalyseR/NAMESPACE at master · krademaker/tagmapAnalyseR · GitHub

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# Generated by roxygen2: do not edit by hand

export(chromosomeSlidingWindow)
export(findAmbiguousInsertionSites)
export(getChromosomeSize)
export(mapInsertionSites)
export(readBam)
export(readPutativeInsertions)
export(slidingWindowReadoutCounts)
export(slidingWindowReadoutFraction)
export(switchReadStrand)
export(updateInsertionSiteData)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,as.data.frame)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(GenomicRanges,reduce)
importFrom(data.table,as.data.table)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,coalesce)
importFrom(dplyr,count)
importFrom(dplyr,filter)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,rowwise)
importFrom(dplyr,select)
importFrom(stats,runif)
importFrom(tibble,tibble)
importFrom(tidyr,replace_na)
importFrom(utils,read.table)
importFrom(utils,tail)