docs latex fix

Author: MarcusMNoack

docs/source/conf.py

@@ -51,7 +51,7 @@ def setup(app):
 
 nb_execution_mode = 'off'
 
-myst_enable_extensions = ['colon_fence']
+myst_enable_extensions = ['colon_fence', 'dollarmath', 'amsmath']
 
 intersphinx_mapping = {
     'python': ('https://docs.python.org/3/', None),

examples/MultiTaskTest.ipynb

@@ -19,7 +19,7 @@
    "outputs": [],
    "source": [
     "#install the newest version of fvgp\n",
-    "#!pip install fvgp~=4.7.9"
+    "#!pip install fvgp~=4.8.0"
    ]
   },
   {
@@ -55,17 +55,17 @@
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "/home/marcus/Coding/fvGP/fvgp/gp.py:310: UserWarning: No noise function or measurement noise provided. Noise variances will be set to (0.01 * mean(|y_data|))^2.\n",
+      "/home/marcus/Coding/fvGP/fvgp/gp.py:329: UserWarning: No noise function or measurement noise provided. Noise variances will be set to (0.01 * mean(|y_data|))^2.\n",
       "  self.likelihood = GPlikelihood(self.data,\n"
      ]
     },
     {
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "hyperparameters:  [12.12847202 10.6867904 ]\n",
-      "prediction :  3.2944069811247743\n",
-      "uncertainty:  [0.93214154]\n"
+      "hyperparameters:  [28.85710592 28.97643312]\n",
+      "prediction :  3.3575135028855434\n",
+      "uncertainty:  [0.5369167]\n"
      ]
     }
    ],
@@ -232,7 +232,7 @@
     {
      "data": {
       "text/plain": [
-       "array([ 0.9038004 , 10.03596858])"
+       "array([1.69625485, 3.96570178])"
       ]
      },
      "execution_count": 7,
@@ -259,10 +259,10 @@
      "data": {
       "text/plain": [
        "{'x': ['dwed', 'dwe'],\n",
-       " 'm(x)': array([[0.76525193, 0.76525193, 0.76525193, 0.76525193, 0.76525193],\n",
-       "        [0.59857919, 0.59857919, 0.59857919, 0.59857919, 0.59857919]]),\n",
-       " 'm(x)_flat': array([0.76525193, 0.59857919, 0.76525193, 0.59857919, 0.76525193,\n",
-       "        0.59857919, 0.76525193, 0.59857919, 0.76525193, 0.59857919]),\n",
+       " 'm(x)': array([[0.49867421, 0.49867421, 0.49867421, 0.49867421, 0.49867421],\n",
+       "        [0.53123029, 0.53123029, 0.53123029, 0.53123029, 0.53123029]]),\n",
+       " 'm(x)_flat': array([0.49867421, 0.53123029, 0.49867421, 0.53123029, 0.49867421,\n",
+       "        0.53123029, 0.49867421, 0.53123029, 0.49867421, 0.53123029]),\n",
        " 'x_pred': [['dwed', np.int64(0)],\n",
        "  ['dwe', np.int64(0)],\n",
        "  ['dwed', np.int64(1)],\n",
@@ -327,7 +327,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.14"
+   "version": "3.11.15"
   }
  },
  "nbformat": 4,

examples/NonEuclideanInputSpaces.ipynb

@@ -16,14 +16,6 @@
 # TODO: search below "TODO"
 
 
-# RECENT UNTESTED CHANGES
-#   - NON PD error for cholesky and rank-1 updates
-#   - added a sparse CG tolerance to the args
-#   - added a check for the presence of pytorch or cupy when gpu compute device is specified
-#   - dtypes for lin alg
-#   - scatter only at init and when data changes. scatter future released. 
-#   - added a lot of checks for the formats of the inputs and outputs of the callables and the hyperparameters
-#   - added async MCMC and Adam training options for local and remote training. This is basically accomplished, but not fully tested yet.
 
 class GP:
     """