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datacrumbs.py
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import dask.dataframe as dd
import numpy as np
import pandas as pd
from typing import List
from .analysis_utils import fix_dtypes, fix_std_cols, set_unique_counts
from .constants import COL_COUNT, COL_PROC_NAME, COL_TIME
from .dftracer import DFTracerAnalyzer
from .metrics import set_main_metrics
from .types import ViewType
from .utils.dask_utils import flatten_column_names
from .utils.log_utils import log_block
from .utils.stack_utils import (
add_stack_time_context,
assign_hierarchy,
compute_self_time,
set_stack_metrics,
)
def _add_hierarchy_columns(traces: dd.DataFrame) -> dd.DataFrame:
meta = traces._meta.copy()
meta = meta.assign(
event_id=pd.Series(dtype="string"),
parent_id=pd.Series(dtype="string"),
root_id=pd.Series(dtype="string"),
depth=pd.Series(dtype="int64"),
)
return (
traces.groupby(["pid", "tid"])
.apply(assign_hierarchy, meta=meta)
.reset_index(drop=True)
)
class DataCrumbsAnalyzer(DFTracerAnalyzer):
def read_trace(self, trace_path, extra_columns, extra_columns_fn):
traces = super().read_trace(trace_path, extra_columns, extra_columns_fn)
if self.preset.name == "dynamic":
with log_block("set_dynamic_layer_defs"):
layers = traces['cat'].unique().compute().tolist()
self.layers = layers
for layer in layers:
self.preset.derived_metrics[layer] = {}
self.preset.layer_defs[layer] = f"cat == '{layer}'"
self.preset.layer_deps[layer] = None
return traces
def postread_trace(self, traces, view_types):
traces = super().postread_trace(traces, view_types)
if self.preset.name == "stack":
traces = _add_hierarchy_columns(traces)
traces = compute_self_time(traces)
self._stack_traces = traces
return traces
def _compute_high_level_metrics(
self,
traces: dd.DataFrame,
view_types: list,
partition_size: str,
) -> dd.DataFrame:
if self.preset.name != "stack":
return super()._compute_high_level_metrics(traces, view_types, partition_size)
extra_cols = ["cat", "func_name", "parent_id", "root_id", "depth"]
present_extra = [col for col in extra_cols if col in traces.columns]
group_cols = list(dict.fromkeys(list(view_types) + present_extra))
agg: dict[str, str] = {}
if COL_TIME in traces.columns:
agg[COL_TIME] = "sum"
if "self_time" in traces.columns:
agg["self_time"] = "sum"
if "child_time" in traces.columns:
agg["child_time"] = "sum"
if COL_COUNT in traces.columns:
agg[COL_COUNT] = "sum"
if "size" in traces.columns:
agg["size"] = "sum"
for col in traces.columns:
if col in group_cols:
continue
if "_bin_" in col:
agg[col] = "sum"
split_out = max(1, int(np.sqrt(traces.npartitions)))
return (
traces.groupby(group_cols)
.agg(agg, split_out=split_out)
.repartition(partition_size=partition_size)
)
def _compute_main_view(
self,
layer,
hlm: dd.DataFrame,
view_types: List[ViewType],
partition_size: str,
) -> dd.DataFrame:
if self.preset.name != "stack":
return super()._compute_main_view(layer, hlm, view_types, partition_size)
with log_block("drop_and_set_metrics", layer=layer):
hlm = hlm.map_partitions(self.set_layer_metrics, derived_metrics=self.preset.derived_metrics.get(layer, {}))
stack_keys = ["parent_id", "root_id", "depth"]
group_keys = list(view_types) + stack_keys
main_view_agg = {}
for col in hlm.columns:
if col in group_keys:
continue
if pd.api.types.is_numeric_dtype(hlm[col].dtype):
main_view_agg[col] = "sum"
else:
main_view_agg[col] = "first"
main_view = hlm.groupby(group_keys).agg(main_view_agg, split_out=hlm.npartitions)
if any(col.endswith("count") for col in main_view.columns) and any(
col.endswith("size") for col in main_view.columns
):
main_view = main_view.map_partitions(set_main_metrics)
main_view = (
main_view.replace(0, pd.NA)
.map_partitions(fix_dtypes, time_sliced=self.time_sliced)
.persist()
)
return add_stack_time_context(main_view, traces=self._stack_traces)
def _compute_view(
self,
layer,
records: dd.DataFrame,
view_key,
view_type: str,
view_types: List[ViewType],
) -> dd.DataFrame:
if self.preset.name != "stack":
return super()._compute_view(layer, records, view_key, view_type, view_types)
stack_keys = ["parent_id", "root_id", "depth"]
group_keys = [view_type] + stack_keys
if not set(stack_keys).issubset(records.columns):
records = records.reset_index()
view_agg = {}
for col in records.columns:
if col in group_keys:
continue
if col in ["parent_time", "root_time"]:
view_agg[col] = ["first"]
elif pd.api.types.is_numeric_dtype(records[col].dtype):
view_agg[col] = ["sum", "min", "max", "mean", "std"]
else:
view_agg[col] = ["first"]
std_cols = [col for col, aggs in view_agg.items() if isinstance(aggs, list) and "std" in aggs]
records = records.map_partitions(fix_std_cols, std_cols=std_cols)
pre_view = records
if view_type != COL_PROC_NAME and COL_PROC_NAME in pre_view.columns:
pre_view = pre_view.groupby(group_keys + [COL_PROC_NAME]).sum().reset_index()
view = pre_view.groupby(group_keys).agg(view_agg)
view = flatten_column_names(view)
stack_key_cols = {"parent_id", "root_id", "depth", "parent_id_first", "root_id_first", "depth_first"}
def replace_zero_metrics(pdf: pd.DataFrame) -> pd.DataFrame:
metric_cols = [
c
for c in pdf.columns
if c not in stack_key_cols and pd.api.types.is_numeric_dtype(pdf[c])
]
pdf = pdf.copy()
pdf[metric_cols] = pdf[metric_cols].replace(0, pd.NA)
return pdf
job_time = self.get_job_time(self._stack_traces).compute()
view = (
view.map_partitions(replace_zero_metrics)
.map_partitions(set_unique_counts, layer=layer)
.map_partitions(fix_dtypes, time_sliced=self.time_sliced)
.map_partitions(set_stack_metrics, job_time=job_time)
.persist()
)
return view