tda-mapper-python/pyproject.toml at main · lucasimi/tda-mapper-python · GitHub

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[build-system]
requires = ["setuptools>=42", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "tda-mapper"
version = "0.12.0"
description = "A simple and efficient Python implementation of Mapper algorithm for Topological Data Analysis"
readme = "README.md"
authors = [{ name = "Luca Simi", email = "lucasimi90@gmail.com" }]
maintainers = [{ name = "Luca Simi", email = "lucasimi90@gmail.com" }]
license = { file = "LICENSE" }
classifiers = [
    "Intended Audience :: Developers",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Mathematics",
    "Topic :: Scientific/Engineering :: Information Analysis",
    "Topic :: Scientific/Engineering :: Visualization",
    "Topic :: Software Development :: Libraries",
    "License :: OSI Approved :: Apache Software License",
    "Programming Language :: Python",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Operating System :: OS Independent",
    "Development Status :: 5 - Production/Stable",
]
keywords = ["tda", "mapper", "topology", "topological data analysis"]
dependencies = [
    "numpy>=1.20.1,<2.0.0",
    "matplotlib>=3.3.4,<4.0.0",
    "networkx>=2.5,<3.0.0",
    "igraph>=0.11.8,<0.12.0",
    "numba>=0.54,<0.62",
    "pyvis>=0.3.2,<0.4.0",
    "plotly>=6.0.1,<7.0.0",
    "joblib>=1.4.2,<2.0.0",
]
requires-python = ">=3.9"

[project.optional-dependencies]
dev = [
    "coverage[toml]",
    "pandas<3.0.0",
    "scikit-learn<1.6.0",
    "pytest",
    "pytest-asyncio",
    "black[jupyter]",
    "isort",
    "flake8",
    "kaleido",
    "nbformat>=4.2.0",
    "umap-learn<0.6.0",
    "nicegui>=2.18.0,<3.0.0",
    "mypy",
]
app = [
    "pandas<3.0.0",
    "scikit-learn<1.6.0",
    "umap-learn<0.6.0",
    "nicegui>=2.18.0,<3.0.0",
]

[project.scripts]
tda-mapper-app = "tdamapper._run_app:run"

[project.urls]
Homepage = "https://github.com/lucasimi/tda-mapper-python"
Documentation = "https://tda-mapper.readthedocs.io"
Issues = "https://github.com/lucasimi/tda-mapper-python/issues"

[tool.setuptools.packages.find]
where = ["src"]

[tool.setuptools.package-data]
"tdamapper" = ["py.typed"]

[tool.coverage.run]
omit = [
    "**/_*.py",
    "benchmarks/*.py",
]

[tool.black]
line-length = 88
target-version = ['py36']
skip-string-normalization = false
include = '\.pyi?$'
exclude = '''
/(
    \.git
  | \.mypy_cache
  | \.pytest_cache
  | \.venv
  | build
  | dist
)/
'''

[tool.isort]
profile = "black"
line_length = 88
multi_line_output = 3
include_trailing_comma = true
force_grid_wrap = 0
combine_as_imports = true
skip = ["venv", ".venv", "build", "dist"]

[tool.pytest.ini_options]
asyncio_mode = "auto"
testpaths = ["tests"]
asyncio_default_fixture_loop_scope = "function"
filterwarnings = [
  'ignore::DeprecationWarning:_plotly_utils\.basevalidators',
]

markers = [
    "module_under_test",
]