Added missing deprecation warning

Author: lucasimi

src/tdamapper/core.py

@@ -440,7 +440,7 @@ def fit(self, X, y=None):
         if self.__failsafe:
             self.__clustering = FailSafeClustering(
                 clustering=self.__clustering,
-                verbose=self.__verbose
+                verbose=self.__verbose,
             )
         self.__cover = clone(self.__cover)
         self.__clustering = clone(self.__clustering)
@@ -451,7 +451,7 @@ def fit(self, X, y=None):
             y,
             self.__cover,
             self.__clustering,
-            n_jobs=self.__n_jobs
+            n_jobs=self.__n_jobs,
         )
         return self
 

src/tdamapper/cover.py

@@ -130,7 +130,7 @@ def search(self, x):
         neighs = self.__vptree.ball_search(
             (-1, x),
             self.__radius,
-            inclusive=False
+            inclusive=False,
         )
         return [x for (x, _) in neighs]
 
@@ -349,7 +349,7 @@ def fit(self, X):
             kind=self.kind,
             leaf_capacity=self.leaf_capacity,
             leaf_radius=self.leaf_radius,
-            pivoting=self.pivoting
+            pivoting=self.pivoting,
         )
         self.__min, self.__max, self.__delta = self._get_bounds(XX)
         self.__ball_proximity.fit(XX)

src/tdamapper/plot.py

@@ -318,7 +318,7 @@ def __init__(
             graph=self.__graph,
             dim=self.__dim,
             iterations=self.__iterations,
-            seed=self.__seed
+            seed=self.__seed,
         )
         self.__colors = colors
         self.__agg = agg
@@ -332,7 +332,7 @@ def __init__(
             title=self.__title,
             width=self.__width,
             height=self.__height,
-            cmap=self.__cmap
+            cmap=self.__cmap,
         )
 
     def update(
@@ -389,7 +389,7 @@ def update(
                 graph=self.__graph,
                 dim=self.__dim,
                 iterations=self.__iterations,
-                seed=self.__seed
+                seed=self.__seed,
             )
         self.__mapper_plot.plot_plotly_update(
             self.__fig,
@@ -398,7 +398,7 @@ def update(
             title=title,
             width=width,
             height=height,
-            cmap=cmap
+            cmap=cmap,
         )
 
     def plot(self):
@@ -465,8 +465,12 @@ def __init__(
         title=None,
         width=512,
         height=512,
-        cmap='jet'
+        cmap='jet',
     ):
+        warn_deprecated(
+            MapperLayoutStatic.__qualname__,
+            MapperPlot.__qualname__,
+        )
         self.__colors = colors
         self.__agg = agg
         self.__title = title
@@ -477,7 +481,7 @@ def __init__(
             graph=graph,
             dim=dim,
             iterations=iterations,
-            seed=seed
+            seed=seed,
         )
 
     def plot(self):
@@ -495,5 +499,5 @@ def plot(self):
             title=self.__title,
             width=self.__width,
             height=self.__height,
-            cmap=self.__cmap
+            cmap=self.__cmap,
         )