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Copy file name to clipboardExpand all lines: paper/paper.md
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title: "Welcome to the iddoverse: An R package for converting IDDO-SDTM data into
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analysis datasets"
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title: "Welcome to the iddoverse: An R package for converting IDDO-SDTM data into
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analysis datasets"
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tags:
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- R
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- Infectious Diseases
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- Data Transformation
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- Study Data Tabulation Model
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date: "7 April 2026"
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output: word_document
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date: "7 April 2026"
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output:
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word_document: default
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html_document:
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df_print: paged
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pdf_document: default
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authors:
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- name: Rhys Peploe
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orcid: "0009-0001-1669-3716"
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- name: Rhys Peploe
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orcid: "0009-0001-1669-3716"
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affiliation: 1, 2
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- name: James Wilson
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orcid: "0000-0003-3615-4928"
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affiliations:
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- name: Infectious Diseases Data Observatory (IDDO), Oxford, United Kingdom
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index: 1
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- name: Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, Oxford, United Kingdom
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- name: Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine,
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Oxford, United Kingdom
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index: 2
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---
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@@ -149,7 +154,7 @@ diseases and will not be relevant to most. The hierarchy of timing variables is
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parameter to enable researchers to select the most appropriate variable(s) for their analysis. By choosing a ‘best choice’ timing
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and result, potential confusion surrounding multiple columns is removed.
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{ height=300px keepaspectratio=true }
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The `prepare_domain()` function then pivots the rows by the best choice time variable (`TIME`, `TIME_SOURCE`), the study ID (`STUDYID`)
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and participant number (`USUBJID`). The different events/findings/tests are transformed into columns, and the dataset is populated
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