Automated dependency upgrades (#1924)

* update dependencies for mpcontribs-api (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-api (ubuntu-latest/py3.12)

* update dependencies for mpcontribs-client (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-client (ubuntu-latest/py3.12)

* update dependencies for mpcontribs-kernel-gateway (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-kernel-gateway (ubuntu-latest/py3.12)

* update dependencies for mpcontribs-portal (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-portal (ubuntu-latest/py3.12)

---------

Co-authored-by: github-actions <github-actions@github.com>

Author: tschaume

mpcontribs-api/requirements/ubuntu-latest_py3.11.txt

@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.38.32
+boto3==1.38.35
     # via flask-mongorest-mpcontribs
-botocore==1.38.32
+botocore==1.38.35
     # via
     #   boto3
     #   s3transfer
@@ -66,7 +66,7 @@ cramjam==2.10.0
     # via python-snappy
 crontab==1.0.4
     # via rq-scheduler
-cryptography==45.0.3
+cryptography==45.0.4
     # via pyopenssl
 css-html-js-minify==2.5.5
     # via mpcontribs-api (setup.py)
@@ -247,7 +247,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==1.41.1
+narwhals==1.42.0
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -276,7 +276,7 @@ notebook==6.5.7
     # via mpcontribs-api (setup.py)
 notebook-shim==0.2.4
     # via nbclassic
-numpy==2.2.6
+numpy==2.3.0
     # via
     #   contourpy
     #   matplotlib
@@ -286,7 +286,7 @@ numpy==2.2.6
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.34.0
+opentelemetry-api==1.34.1
     # via ddtrace
 orjson==3.10.18
     # via
@@ -351,7 +351,7 @@ pygments==2.19.1
     #   nbconvert
 pymatgen==2025.5.28
     # via mpcontribs-api (setup.py)
-pymongo==4.13.0
+pymongo==4.13.1
     # via
     #   flask-mongorest-mpcontribs
     #   mongoengine
@@ -404,7 +404,7 @@ referencing==0.36.2
     #   jupyter-events
 regex==2024.11.6
     # via dateparser
-requests==2.32.3
+requests==2.32.4
     # via
     #   atlasq-tschaume
     #   pymatgen
@@ -426,7 +426,7 @@ rq==2.3.3
     #   rq-scheduler
 rq-scheduler==0.14.0
     # via flask-rq2
-ruamel-yaml==0.18.13
+ruamel-yaml==0.18.14
     # via
     #   monty
     #   pymatgen
@@ -544,7 +544,7 @@ wrapt==1.17.2
     # via ddtrace
 xmltodict==0.14.2
     # via ddtrace
-zipp==3.22.0
+zipp==3.23.0
     # via importlib-metadata
 zope-event==5.0
     # via gevent

mpcontribs-api/requirements/ubuntu-latest_py3.11_extras.txt

@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.38.32
+boto3==1.38.35
     # via flask-mongorest-mpcontribs
-botocore==1.38.32
+botocore==1.38.35
     # via
     #   boto3
     #   s3transfer
@@ -66,7 +66,7 @@ cramjam==2.10.0
     # via python-snappy
 crontab==1.0.4
     # via rq-scheduler
-cryptography==45.0.3
+cryptography==45.0.4
     # via pyopenssl
 css-html-js-minify==2.5.5
     # via mpcontribs-api (setup.py)
@@ -253,7 +253,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==1.41.1
+narwhals==1.42.0
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -282,7 +282,7 @@ notebook==6.5.7
     # via mpcontribs-api (setup.py)
 notebook-shim==0.2.4
     # via nbclassic
-numpy==2.2.6
+numpy==2.3.0
     # via
     #   contourpy
     #   matplotlib
@@ -292,7 +292,7 @@ numpy==2.2.6
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.34.0
+opentelemetry-api==1.34.1
     # via ddtrace
 orjson==3.10.18
     # via
@@ -365,7 +365,7 @@ pygments==2.19.1
     #   pytest
 pymatgen==2025.5.28
     # via mpcontribs-api (setup.py)
-pymongo==4.13.0
+pymongo==4.13.1
     # via
     #   flask-mongorest-mpcontribs
     #   mongoengine
@@ -420,7 +420,7 @@ referencing==0.36.2
     #   jupyter-events
 regex==2024.11.6
     # via dateparser
-requests==2.32.3
+requests==2.32.4
     # via
     #   atlasq-tschaume
     #   pymatgen
@@ -442,7 +442,7 @@ rq==2.3.3
     #   rq-scheduler
 rq-scheduler==0.14.0
     # via flask-rq2
-ruamel-yaml==0.18.13
+ruamel-yaml==0.18.14
     # via
     #   monty
     #   pymatgen
@@ -560,7 +560,7 @@ wrapt==1.17.2
     # via ddtrace
 xmltodict==0.14.2
     # via ddtrace
-zipp==3.22.0
+zipp==3.23.0
     # via importlib-metadata
 zope-event==5.0
     # via gevent

mpcontribs-api/requirements/ubuntu-latest_py3.12.txt

@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.38.32
+boto3==1.38.35
     # via flask-mongorest-mpcontribs
-botocore==1.38.32
+botocore==1.38.35
     # via
     #   boto3
     #   s3transfer
@@ -66,7 +66,7 @@ cramjam==2.10.0
     # via python-snappy
 crontab==1.0.4
     # via rq-scheduler
-cryptography==45.0.3
+cryptography==45.0.4
     # via pyopenssl
 css-html-js-minify==2.5.5
     # via mpcontribs-api (setup.py)
@@ -247,7 +247,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==1.41.1
+narwhals==1.42.0
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -276,7 +276,7 @@ notebook==6.5.7
     # via mpcontribs-api (setup.py)
 notebook-shim==0.2.4
     # via nbclassic
-numpy==2.2.6
+numpy==2.3.0
     # via
     #   contourpy
     #   matplotlib
@@ -286,7 +286,7 @@ numpy==2.2.6
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.34.0
+opentelemetry-api==1.34.1
     # via ddtrace
 orjson==3.10.18
     # via
@@ -351,7 +351,7 @@ pygments==2.19.1
     #   nbconvert
 pymatgen==2025.5.28
     # via mpcontribs-api (setup.py)
-pymongo==4.13.0
+pymongo==4.13.1
     # via
     #   flask-mongorest-mpcontribs
     #   mongoengine
@@ -404,7 +404,7 @@ referencing==0.36.2
     #   jupyter-events
 regex==2024.11.6
     # via dateparser
-requests==2.32.3
+requests==2.32.4
     # via
     #   atlasq-tschaume
     #   pymatgen
@@ -426,7 +426,7 @@ rq==2.3.3
     #   rq-scheduler
 rq-scheduler==0.14.0
     # via flask-rq2
-ruamel-yaml==0.18.13
+ruamel-yaml==0.18.14
     # via
     #   monty
     #   pymatgen
@@ -543,7 +543,7 @@ wrapt==1.17.2
     # via ddtrace
 xmltodict==0.14.2
     # via ddtrace
-zipp==3.22.0
+zipp==3.23.0
     # via importlib-metadata
 zope-event==5.0
     # via gevent

mpcontribs-api/requirements/ubuntu-latest_py3.12_extras.txt

@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.38.32
+boto3==1.38.35
     # via flask-mongorest-mpcontribs
-botocore==1.38.32
+botocore==1.38.35
     # via
     #   boto3
     #   s3transfer
@@ -66,7 +66,7 @@ cramjam==2.10.0
     # via python-snappy
 crontab==1.0.4
     # via rq-scheduler
-cryptography==45.0.3
+cryptography==45.0.4
     # via pyopenssl
 css-html-js-minify==2.5.5
     # via mpcontribs-api (setup.py)
@@ -253,7 +253,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==1.41.1
+narwhals==1.42.0
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -282,7 +282,7 @@ notebook==6.5.7
     # via mpcontribs-api (setup.py)
 notebook-shim==0.2.4
     # via nbclassic
-numpy==2.2.6
+numpy==2.3.0
     # via
     #   contourpy
     #   matplotlib
@@ -292,7 +292,7 @@ numpy==2.2.6
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.34.0
+opentelemetry-api==1.34.1
     # via ddtrace
 orjson==3.10.18
     # via
@@ -365,7 +365,7 @@ pygments==2.19.1
     #   pytest
 pymatgen==2025.5.28
     # via mpcontribs-api (setup.py)
-pymongo==4.13.0
+pymongo==4.13.1
     # via
     #   flask-mongorest-mpcontribs
     #   mongoengine
@@ -420,7 +420,7 @@ referencing==0.36.2
     #   jupyter-events
 regex==2024.11.6
     # via dateparser
-requests==2.32.3
+requests==2.32.4
     # via
     #   atlasq-tschaume
     #   pymatgen
@@ -442,7 +442,7 @@ rq==2.3.3
     #   rq-scheduler
 rq-scheduler==0.14.0
     # via flask-rq2
-ruamel-yaml==0.18.13
+ruamel-yaml==0.18.14
     # via
     #   monty
     #   pymatgen
@@ -559,7 +559,7 @@ wrapt==1.17.2
     # via ddtrace
 xmltodict==0.14.2
     # via ddtrace
-zipp==3.22.0
+zipp==3.23.0
     # via importlib-metadata
 zope-event==5.0
     # via gevent

mpcontribs-client/requirements/ubuntu-latest_py3.11.txt

@@ -94,11 +94,11 @@ msgpack==1.1.0
     # via
     #   bravado
     #   bravado-core
-narwhals==1.41.1
+narwhals==1.42.0
     # via plotly
 networkx==3.5
     # via pymatgen
-numpy==2.2.6
+numpy==2.3.0
     # via
     #   contourpy
     #   matplotlib
@@ -148,7 +148,7 @@ pyisemail==2.0.1
     # via mpcontribs-client (setup.py)
 pymatgen==2025.5.28
     # via mpcontribs-client (setup.py)
-pymongo==4.13.0
+pymongo==4.13.1
     # via mpcontribs-client (setup.py)
 pyparsing==3.2.3
     # via
@@ -174,7 +174,7 @@ referencing==0.36.2
     # via
     #   jsonschema
     #   jsonschema-specifications
-requests==2.32.3
+requests==2.32.4
     # via
     #   bravado
     #   bravado-core
@@ -190,7 +190,7 @@ rpds-py==0.25.1
     # via
     #   jsonschema
     #   referencing
-ruamel-yaml==0.18.13
+ruamel-yaml==0.18.14
     # via
     #   monty
     #   pymatgen