Automated dependency upgrades (#1927)

* update dependencies for mpcontribs-api (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-api (ubuntu-latest/py3.12)

* update dependencies for mpcontribs-client (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-client (ubuntu-latest/py3.12)

* update dependencies for mpcontribs-kernel-gateway (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-kernel-gateway (ubuntu-latest/py3.12)

* update dependencies for mpcontribs-portal (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-portal (ubuntu-latest/py3.12)

---------

Co-authored-by: github-actions <github-actions@github.com>

Author: tschaume

mpcontribs-api/requirements/ubuntu-latest_py3.11.txt

@@ -12,7 +12,7 @@ argon2-cffi==25.1.0
     # via
     #   jupyter-server
     #   notebook
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.39.15
+boto3==1.40.0
     # via flask-mongorest-mpcontribs
-botocore==1.39.15
+botocore==1.40.0
     # via
     #   boto3
     #   s3transfer
@@ -130,7 +130,7 @@ fonttools==4.59.0
     # via matplotlib
 fqdn==1.5.1
     # via jsonschema
-freezegun==1.5.3
+freezegun==1.5.4
     # via rq-scheduler
 gevent==25.5.1
     # via gunicorn
@@ -226,7 +226,7 @@ marshmallow==3.26.1
     #   mpcontribs-api (setup.py)
 marshmallow-mongoengine==0.31.2
     # via flask-mongorest-mpcontribs
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via
@@ -249,7 +249,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -288,7 +288,7 @@ numpy==2.3.2
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.35.0
+opentelemetry-api==1.36.0
     # via ddtrace
 orjson==3.11.1
     # via
@@ -406,7 +406,7 @@ referencing==0.36.2
     #   jsonschema
     #   jsonschema-specifications
     #   jupyter-events
-regex==2024.11.6
+regex==2025.7.34
     # via dateparser
 requests==2.32.4
     # via

mpcontribs-api/requirements/ubuntu-latest_py3.11_extras.txt

@@ -12,7 +12,7 @@ argon2-cffi==25.1.0
     # via
     #   jupyter-server
     #   notebook
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.39.15
+boto3==1.40.0
     # via flask-mongorest-mpcontribs
-botocore==1.39.15
+botocore==1.40.0
     # via
     #   boto3
     #   s3transfer
@@ -132,7 +132,7 @@ fonttools==4.59.0
     # via matplotlib
 fqdn==1.5.1
     # via jsonschema
-freezegun==1.5.3
+freezegun==1.5.4
     # via rq-scheduler
 gevent==25.5.1
     # via gunicorn
@@ -230,7 +230,7 @@ marshmallow==3.26.1
     #   mpcontribs-api (setup.py)
 marshmallow-mongoengine==0.31.2
     # via flask-mongorest-mpcontribs
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via
@@ -255,7 +255,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -294,7 +294,7 @@ numpy==2.3.2
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.35.0
+opentelemetry-api==1.36.0
     # via ddtrace
 orjson==3.11.1
     # via
@@ -422,7 +422,7 @@ referencing==0.36.2
     #   jsonschema
     #   jsonschema-specifications
     #   jupyter-events
-regex==2024.11.6
+regex==2025.7.34
     # via dateparser
 requests==2.32.4
     # via

mpcontribs-api/requirements/ubuntu-latest_py3.12.txt

@@ -12,7 +12,7 @@ argon2-cffi==25.1.0
     # via
     #   jupyter-server
     #   notebook
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.39.15
+boto3==1.40.0
     # via flask-mongorest-mpcontribs
-botocore==1.39.15
+botocore==1.40.0
     # via
     #   boto3
     #   s3transfer
@@ -130,7 +130,7 @@ fonttools==4.59.0
     # via matplotlib
 fqdn==1.5.1
     # via jsonschema
-freezegun==1.5.3
+freezegun==1.5.4
     # via rq-scheduler
 gevent==25.5.1
     # via gunicorn
@@ -226,7 +226,7 @@ marshmallow==3.26.1
     #   mpcontribs-api (setup.py)
 marshmallow-mongoengine==0.31.2
     # via flask-mongorest-mpcontribs
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via
@@ -249,7 +249,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -288,7 +288,7 @@ numpy==2.3.2
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.35.0
+opentelemetry-api==1.36.0
     # via ddtrace
 orjson==3.11.1
     # via
@@ -406,7 +406,7 @@ referencing==0.36.2
     #   jsonschema
     #   jsonschema-specifications
     #   jupyter-events
-regex==2024.11.6
+regex==2025.7.34
     # via dateparser
 requests==2.32.4
     # via

mpcontribs-api/requirements/ubuntu-latest_py3.12_extras.txt

@@ -12,7 +12,7 @@ argon2-cffi==25.1.0
     # via
     #   jupyter-server
     #   notebook
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -36,9 +36,9 @@ blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.39.15
+boto3==1.40.0
     # via flask-mongorest-mpcontribs
-botocore==1.39.15
+botocore==1.40.0
     # via
     #   boto3
     #   s3transfer
@@ -132,7 +132,7 @@ fonttools==4.59.0
     # via matplotlib
 fqdn==1.5.1
     # via jsonschema
-freezegun==1.5.3
+freezegun==1.5.4
     # via rq-scheduler
 gevent==25.5.1
     # via gunicorn
@@ -230,7 +230,7 @@ marshmallow==3.26.1
     #   mpcontribs-api (setup.py)
 marshmallow-mongoengine==0.31.2
     # via flask-mongorest-mpcontribs
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via
@@ -255,7 +255,7 @@ more-itertools==10.7.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclassic==1.3.1
     # via notebook
@@ -294,7 +294,7 @@ numpy==2.3.2
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.35.0
+opentelemetry-api==1.36.0
     # via ddtrace
 orjson==3.11.1
     # via
@@ -422,7 +422,7 @@ referencing==0.36.2
     #   jsonschema
     #   jsonschema-specifications
     #   jupyter-events
-regex==2024.11.6
+regex==2025.7.34
     # via dateparser
 requests==2.32.4
     # via

mpcontribs-client/requirements/ubuntu-latest_py3.11.txt

@@ -82,7 +82,7 @@ kiwisolver==1.4.8
     # via matplotlib
 lark==1.2.2
     # via rfc3987-syntax
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via ipython
@@ -96,7 +96,7 @@ msgpack==1.1.1
     # via
     #   bravado
     #   bravado-core
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 networkx==3.5
     # via pymatgen

mpcontribs-client/requirements/ubuntu-latest_py3.11_extras.txt

@@ -90,7 +90,7 @@ kiwisolver==1.4.8
     # via matplotlib
 lark==1.2.2
     # via rfc3987-syntax
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via ipython
@@ -106,7 +106,7 @@ msgpack==1.1.1
     # via
     #   bravado
     #   bravado-core
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 networkx==3.5
     # via pymatgen

mpcontribs-client/requirements/ubuntu-latest_py3.12.txt

@@ -82,7 +82,7 @@ kiwisolver==1.4.8
     # via matplotlib
 lark==1.2.2
     # via rfc3987-syntax
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via ipython
@@ -96,7 +96,7 @@ msgpack==1.1.1
     # via
     #   bravado
     #   bravado-core
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 networkx==3.5
     # via pymatgen

mpcontribs-client/requirements/ubuntu-latest_py3.12_extras.txt

@@ -90,7 +90,7 @@ kiwisolver==1.4.8
     # via matplotlib
 lark==1.2.2
     # via rfc3987-syntax
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via ipython
@@ -106,7 +106,7 @@ msgpack==1.1.1
     # via
     #   bravado
     #   bravado-core
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 networkx==3.5
     # via pymatgen

mpcontribs-kernel-gateway/requirements/ubuntu-latest_py3.11.txt

@@ -8,7 +8,7 @@ anyio==4.9.0
     # via jupyter-server
 argon2-cffi==25.1.0
     # via jupyter-server
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -168,7 +168,7 @@ markupsafe==3.0.2
     # via
     #   jinja2
     #   nbconvert
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via
@@ -188,7 +188,7 @@ msgpack==1.1.1
     # via
     #   bravado
     #   bravado-core
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclient==0.10.2
     # via nbconvert
@@ -213,7 +213,7 @@ numpy==2.3.2
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.35.0
+opentelemetry-api==1.36.0
     # via ddtrace
 orjson==3.11.1
     # via