Automated dependency upgrades (#1913)

* update dependencies for mpcontribs-api (ubuntu-latest/py3.10)

* update dependencies for mpcontribs-api (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-client (ubuntu-latest/py3.10)

* update dependencies for mpcontribs-client (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-kernel-gateway (ubuntu-latest/py3.10)

* update dependencies for mpcontribs-kernel-gateway (ubuntu-latest/py3.11)

* update dependencies for mpcontribs-portal (ubuntu-latest/py3.10)

* update dependencies for mpcontribs-portal (ubuntu-latest/py3.11)

---------

Co-authored-by: github-actions <github-actions@github.com>

Author: tschaume

mpcontribs-api/requirements/ubuntu-latest_py3.10.txt

@@ -28,23 +28,23 @@ attrs==25.3.0
     # via
     #   jsonschema
     #   referencing
-beautifulsoup4==4.13.3
+beautifulsoup4==4.13.4
     # via nbconvert
 bleach[css]==6.2.0
     # via nbconvert
 blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.37.25
+boto3==1.37.36
     # via flask-mongorest-mpcontribs
-botocore==1.37.25
+botocore==1.37.36
     # via
     #   boto3
     #   s3transfer
 brotli==1.1.0
     # via flask-compress
-bytecode==0.16.1
+bytecode==0.16.2
     # via ddtrace
 certifi==2025.1.31
     # via requests
@@ -60,11 +60,11 @@ click==8.1.8
     #   rq
 comm==0.2.2
     # via ipykernel
-contourpy==1.3.1
+contourpy==1.3.2
     # via matplotlib
-cramjam==2.9.1
+cramjam==2.10.0
     # via python-snappy
-crontab==1.0.1
+crontab==1.0.4
     # via rq-scheduler
 cryptography==44.0.2
     # via pyopenssl
@@ -74,9 +74,9 @@ cycler==0.12.1
     # via matplotlib
 dateparser==1.2.1
     # via mpcontribs-api (setup.py)
-ddtrace==2.21.4
+ddtrace==2.21.6
     # via mpcontribs-api (setup.py)
-debugpy==1.8.13
+debugpy==1.8.14
     # via ipykernel
 decorator==5.2.1
     # via ipython
@@ -132,15 +132,15 @@ flexcache==0.3
     # via pint
 flexparser==0.4
     # via pint
-fonttools==4.56.0
+fonttools==4.57.0
     # via matplotlib
 fqdn==1.5.1
     # via jsonschema
 freezegun==1.5.1
     # via rq-scheduler
-gevent==24.11.1
+gevent==25.4.1
     # via gunicorn
-greenlet==3.1.1
+greenlet==3.2.0
     # via gevent
 gunicorn[gevent]==23.0.0
     # via mpcontribs-api (setup.py)
@@ -155,7 +155,7 @@ ipykernel==6.29.5
     # via
     #   nbclassic
     #   notebook
-ipython==8.34.0
+ipython==8.35.0
     # via ipykernel
 ipython-genutils==0.2.0
     # via
@@ -227,6 +227,7 @@ marshmallow==3.26.1
     # via
     #   flask-marshmallow
     #   marshmallow-mongoengine
+    #   mpcontribs-api (setup.py)
 marshmallow-mongoengine==0.31.2
     # via flask-mongorest-mpcontribs
 matplotlib==3.10.1
@@ -252,7 +253,7 @@ more-itertools==10.6.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==1.33.0
+narwhals==1.35.0
     # via plotly
 nbclassic==1.2.0
     # via notebook
@@ -291,7 +292,7 @@ numpy==2.2.4
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.31.1
+opentelemetry-api==1.32.1
     # via ddtrace
 orjson==3.10.16
     # via flask-mongorest-mpcontribs
@@ -317,7 +318,7 @@ parso==0.8.4
     # via jedi
 pexpect==4.9.0
     # via ipython
-pillow==11.2.0
+pillow==11.2.1
     # via matplotlib
 pint==0.24.4
     # via mpcontribs-api (setup.py)
@@ -331,7 +332,7 @@ prometheus-client==0.21.1
     # via
     #   jupyter-server
     #   notebook
-prompt-toolkit==3.0.50
+prompt-toolkit==3.0.51
     # via ipython
 protobuf==6.30.2
     # via ddtrace
@@ -353,9 +354,9 @@ pygments==2.19.1
     # via
     #   ipython
     #   nbconvert
-pymatgen==2025.3.10
+pymatgen==2025.4.17
     # via mpcontribs-api (setup.py)
-pymongo==4.11.3
+pymongo==4.12.0
     # via
     #   flask-mongorest-mpcontribs
     #   mongoengine
@@ -389,7 +390,7 @@ pyyaml==6.0.2
     #   flasgger-tschaume
     #   jupyter-events
     #   pybtex
-pyzmq==26.3.0
+pyzmq==26.4.0
     # via
     #   ipykernel
     #   jupyter-client
@@ -423,7 +424,7 @@ rpds-py==0.24.0
     # via
     #   jsonschema
     #   referencing
-rq==2.2.0
+rq==2.3.2
     # via
     #   flask-rq2
     #   rq-scheduler
@@ -435,7 +436,7 @@ ruamel-yaml==0.18.10
     #   pymatgen
 ruamel-yaml-clib==0.2.12
     # via ruamel-yaml
-s3transfer==0.11.4
+s3transfer==0.11.5
     # via boto3
 scipy==1.15.2
     # via pymatgen
@@ -501,7 +502,7 @@ traitlets==5.14.3
     #   notebook
 types-python-dateutil==2.9.0.20241206
     # via arrow
-typing-extensions==4.13.0
+typing-extensions==4.13.2
     # via
     #   anyio
     #   beautifulsoup4
@@ -524,7 +525,7 @@ uncertainties==3.2.2
     #   pymatgen
 uri-template==1.3.0
     # via jsonschema
-urllib3==2.3.0
+urllib3==2.4.0
     # via
     #   botocore
     #   requests

mpcontribs-api/requirements/ubuntu-latest_py3.10_extras.txt

@@ -28,23 +28,23 @@ attrs==25.3.0
     # via
     #   jsonschema
     #   referencing
-beautifulsoup4==4.13.3
+beautifulsoup4==4.13.4
     # via nbconvert
 bleach[css]==6.2.0
     # via nbconvert
 blinker==1.9.0
     # via mpcontribs-api (setup.py)
 boltons==25.0.0
     # via mpcontribs-api (setup.py)
-boto3==1.37.25
+boto3==1.37.36
     # via flask-mongorest-mpcontribs
-botocore==1.37.25
+botocore==1.37.36
     # via
     #   boto3
     #   s3transfer
 brotli==1.1.0
     # via flask-compress
-bytecode==0.16.1
+bytecode==0.16.2
     # via ddtrace
 certifi==2025.1.31
     # via requests
@@ -60,11 +60,11 @@ click==8.1.8
     #   rq
 comm==0.2.2
     # via ipykernel
-contourpy==1.3.1
+contourpy==1.3.2
     # via matplotlib
-cramjam==2.9.1
+cramjam==2.10.0
     # via python-snappy
-crontab==1.0.1
+crontab==1.0.4
     # via rq-scheduler
 cryptography==44.0.2
     # via pyopenssl
@@ -74,9 +74,9 @@ cycler==0.12.1
     # via matplotlib
 dateparser==1.2.1
     # via mpcontribs-api (setup.py)
-ddtrace==2.21.4
+ddtrace==2.21.6
     # via mpcontribs-api (setup.py)
-debugpy==1.8.13
+debugpy==1.8.14
     # via ipykernel
 decorator==5.2.1
     # via ipython
@@ -135,15 +135,15 @@ flexcache==0.3
     # via pint
 flexparser==0.4
     # via pint
-fonttools==4.56.0
+fonttools==4.57.0
     # via matplotlib
 fqdn==1.5.1
     # via jsonschema
 freezegun==1.5.1
     # via rq-scheduler
-gevent==24.11.1
+gevent==25.4.1
     # via gunicorn
-greenlet==3.1.1
+greenlet==3.2.0
     # via gevent
 gunicorn[gevent]==23.0.0
     # via mpcontribs-api (setup.py)
@@ -160,7 +160,7 @@ ipykernel==6.29.5
     # via
     #   nbclassic
     #   notebook
-ipython==8.34.0
+ipython==8.35.0
     # via ipykernel
 ipython-genutils==0.2.0
     # via
@@ -232,6 +232,7 @@ marshmallow==3.26.1
     # via
     #   flask-marshmallow
     #   marshmallow-mongoengine
+    #   mpcontribs-api (setup.py)
 marshmallow-mongoengine==0.31.2
     # via flask-mongorest-mpcontribs
 matplotlib==3.10.1
@@ -259,7 +260,7 @@ more-itertools==10.6.0
     # via mpcontribs-api (setup.py)
 mpmath==1.3.0
     # via sympy
-narwhals==1.33.0
+narwhals==1.35.0
     # via plotly
 nbclassic==1.2.0
     # via notebook
@@ -298,7 +299,7 @@ numpy==2.2.4
     #   pymatgen
     #   scipy
     #   spglib
-opentelemetry-api==1.31.1
+opentelemetry-api==1.32.1
     # via ddtrace
 orjson==3.10.16
     # via flask-mongorest-mpcontribs
@@ -325,7 +326,7 @@ parso==0.8.4
     # via jedi
 pexpect==4.9.0
     # via ipython
-pillow==11.2.0
+pillow==11.2.1
     # via matplotlib
 pint==0.24.4
     # via mpcontribs-api (setup.py)
@@ -341,7 +342,7 @@ prometheus-client==0.21.1
     # via
     #   jupyter-server
     #   notebook
-prompt-toolkit==3.0.50
+prompt-toolkit==3.0.51
     # via ipython
 protobuf==6.30.2
     # via ddtrace
@@ -367,9 +368,9 @@ pygments==2.19.1
     # via
     #   ipython
     #   nbconvert
-pymatgen==2025.3.10
+pymatgen==2025.4.17
     # via mpcontribs-api (setup.py)
-pymongo==4.11.3
+pymongo==4.12.0
     # via
     #   flask-mongorest-mpcontribs
     #   mongoengine
@@ -405,7 +406,7 @@ pyyaml==6.0.2
     #   flasgger-tschaume
     #   jupyter-events
     #   pybtex
-pyzmq==26.3.0
+pyzmq==26.4.0
     # via
     #   ipykernel
     #   jupyter-client
@@ -439,7 +440,7 @@ rpds-py==0.24.0
     # via
     #   jsonschema
     #   referencing
-rq==2.2.0
+rq==2.3.2
     # via
     #   flask-rq2
     #   rq-scheduler
@@ -451,7 +452,7 @@ ruamel-yaml==0.18.10
     #   pymatgen
 ruamel-yaml-clib==0.2.12
     # via ruamel-yaml
-s3transfer==0.11.4
+s3transfer==0.11.5
     # via boto3
 scipy==1.15.2
     # via pymatgen
@@ -519,7 +520,7 @@ traitlets==5.14.3
     #   notebook
 types-python-dateutil==2.9.0.20241206
     # via arrow
-typing-extensions==4.13.0
+typing-extensions==4.13.2
     # via
     #   anyio
     #   beautifulsoup4
@@ -542,7 +543,7 @@ uncertainties==3.2.2
     #   pymatgen
 uri-template==1.3.0
     # via jsonschema
-urllib3==2.3.0
+urllib3==2.4.0
     # via
     #   botocore
     #   requests