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Automated dependency upgrades (#986)
* Update ubuntu-latest dependencies for mp-api * Update ubuntu-latest dependencies for mp-api --------- Co-authored-by: github-actions <github-actions@github.com>
1 parent f0ec71f commit a620258

4 files changed

Lines changed: 140 additions & 70 deletions

‎requirements/requirements-ubuntu-latest_py3.11.txt‎

Lines changed: 14 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -17,13 +17,13 @@ bcrypt==4.3.0
1717
# via paramiko
1818
bibtexparser==1.4.3
1919
# via pymatgen
20-
boto3==1.38.31
20+
boto3==1.38.37
2121
# via maggma
22-
botocore==1.38.31
22+
botocore==1.38.37
2323
# via
2424
# boto3
2525
# s3transfer
26-
certifi==2025.4.26
26+
certifi==2025.6.15
2727
# via requests
2828
cffi==1.17.1
2929
# via
@@ -33,17 +33,17 @@ charset-normalizer==3.4.2
3333
# via requests
3434
contourpy==1.3.2
3535
# via matplotlib
36-
cryptography==45.0.3
36+
cryptography==45.0.4
3737
# via paramiko
3838
cycler==0.12.1
3939
# via matplotlib
4040
dnspython==2.7.0
4141
# via
4242
# maggma
4343
# pymongo
44-
emmet-core==0.84.7rc3
44+
emmet-core==0.84.8
4545
# via mp-api (pyproject.toml)
46-
fonttools==4.58.1
46+
fonttools==4.58.4
4747
# via matplotlib
4848
idna==3.10
4949
# via requests
@@ -77,15 +77,15 @@ monty==2025.3.3
7777
# pymatgen
7878
mpmath==1.3.0
7979
# via sympy
80-
msgpack==1.1.0
80+
msgpack==1.1.1
8181
# via
8282
# maggma
8383
# mp-api (pyproject.toml)
84-
narwhals==1.41.0
84+
narwhals==1.43.0
8585
# via plotly
8686
networkx==3.5
8787
# via pymatgen
88-
numpy==2.2.6
88+
numpy==2.3.0
8989
# via
9090
# contourpy
9191
# maggma
@@ -120,7 +120,7 @@ pybtex==0.24.0
120120
# via emmet-core
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pycparser==2.22
122122
# via cffi
123-
pydantic==2.11.5
123+
pydantic==2.11.7
124124
# via
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# emmet-core
126126
# maggma
@@ -133,7 +133,7 @@ pydantic-settings==2.9.1
133133
# maggma
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pydash==8.0.5
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# via maggma
136-
pymatgen==2025.5.28
136+
pymatgen==2025.6.14
137137
# via
138138
# emmet-core
139139
# mp-api (pyproject.toml)
@@ -159,21 +159,21 @@ pytz==2025.2
159159
# pandas
160160
pyyaml==6.0.2
161161
# via pybtex
162-
pyzmq==26.4.0
162+
pyzmq==27.0.0
163163
# via maggma
164164
referencing==0.36.2
165165
# via
166166
# jsonschema
167167
# jsonschema-specifications
168-
requests==2.32.3
168+
requests==2.32.4
169169
# via
170170
# mp-api (pyproject.toml)
171171
# pymatgen
172172
rpds-py==0.25.1
173173
# via
174174
# jsonschema
175175
# referencing
176-
ruamel-yaml==0.18.12
176+
ruamel-yaml==0.18.14
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# via
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# maggma
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# monty

‎requirements/requirements-ubuntu-latest_py3.11_extras.txt‎

Lines changed: 56 additions & 21 deletions
Original file line numberDiff line numberDiff line change
@@ -6,6 +6,8 @@
66
#
77
aioitertools==0.12.0
88
# via maggma
9+
alabaster==1.0.0
10+
# via sphinx
911
annotated-types==0.7.0
1012
# via pydantic
1113
arrow==1.3.0
@@ -19,27 +21,29 @@ attrs==25.3.0
1921
# jsonlines
2022
# jsonschema
2123
# referencing
24+
babel==2.17.0
25+
# via sphinx
2226
bcrypt==4.3.0
2327
# via paramiko
2428
bibtexparser==1.4.3
2529
# via pymatgen
2630
boltons==25.0.0
2731
# via mpcontribs-client
28-
boto3==1.38.31
32+
boto3==1.38.37
2933
# via
3034
# maggma
3135
# mp-api (pyproject.toml)
32-
botocore==1.38.31
36+
botocore==1.38.37
3337
# via
3438
# boto3
3539
# s3transfer
3640
bravado==12.0.1
3741
# via mpcontribs-client
3842
bravado-core==6.1.1
3943
# via bravado
40-
cachetools==6.0.0
44+
cachetools==6.1.0
4145
# via mpcontribs-client
42-
certifi==2025.4.26
46+
certifi==2025.6.15
4347
# via requests
4448
cffi==1.17.1
4549
# via
@@ -51,9 +55,9 @@ charset-normalizer==3.4.2
5155
# via requests
5256
contourpy==1.3.2
5357
# via matplotlib
54-
coverage[toml]==7.8.2
58+
coverage[toml]==7.9.1
5559
# via pytest-cov
56-
cryptography==45.0.3
60+
cryptography==45.0.4
5761
# via paramiko
5862
custodian==2025.5.12
5963
# via mp-api (pyproject.toml)
@@ -68,7 +72,9 @@ dnspython==2.7.0
6872
# maggma
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# pyisemail
7074
# pymongo
71-
emmet-core[all]==0.84.7rc3
75+
docutils==0.21.2
76+
# via sphinx
77+
emmet-core[all]==0.84.8
7278
# via mp-api (pyproject.toml)
7379
executing==2.2.0
7480
# via stack-data
@@ -86,7 +92,7 @@ flexcache==0.3
8692
# via pint
8793
flexparser==0.4
8894
# via pint
89-
fonttools==4.58.1
95+
fonttools==4.58.4
9096
# via matplotlib
9197
fqdn==1.5.1
9298
# via jsonschema
@@ -100,6 +106,8 @@ idna==3.10
100106
# requests
101107
imageio==2.37.0
102108
# via scikit-image
109+
imagesize==1.4.1
110+
# via sphinx
103111
importlib-resources==6.5.2
104112
# via swagger-spec-validator
105113
inflect==7.5.0
@@ -114,6 +122,8 @@ isoduration==20.11.0
114122
# via jsonschema
115123
jedi==0.19.2
116124
# via ipython
125+
jinja2==3.1.6
126+
# via sphinx
117127
jmespath==1.0.1
118128
# via
119129
# boto3
@@ -147,6 +157,8 @@ lazy-loader==0.4
147157
# via scikit-image
148158
maggma==0.71.5
149159
# via mp-api (pyproject.toml)
160+
markupsafe==3.0.2
161+
# via jinja2
150162
matminer==0.9.3
151163
# via robocrys
152164
matplotlib==3.10.3
@@ -192,20 +204,20 @@ mpmath==1.3.0
192204
# via sympy
193205
mrcfile==1.5.4
194206
# via griddataformats
195-
msgpack==1.1.0
207+
msgpack==1.1.1
196208
# via
197209
# bravado
198210
# bravado-core
199211
# maggma
200212
# mmtf-python
201213
# mp-api (pyproject.toml)
202-
mypy==1.16.0
214+
mypy==1.16.1
203215
# via mp-api (pyproject.toml)
204216
mypy-extensions==1.1.0
205217
# via
206218
# mp-api (pyproject.toml)
207219
# mypy
208-
narwhals==1.41.0
220+
narwhals==1.43.0
209221
# via plotly
210222
networkx==3.5
211223
# via
@@ -258,6 +270,7 @@ packaging==25.0
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# plotly
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# pytest
260272
# scikit-image
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# sphinx
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# statsmodels
262275
palettable==3.3.3
263276
# via pymatgen
@@ -298,7 +311,9 @@ plotly==6.1.2
298311
# pymatgen
299312
# solvation-analysis
300313
pluggy==1.6.0
301-
# via pytest
314+
# via
315+
# pytest
316+
# pytest-cov
302317
pre-commit==4.2.0
303318
# via mp-api (pyproject.toml)
304319
prompt-toolkit==3.0.51
@@ -323,7 +338,7 @@ pycodestyle==2.13.0
323338
# mp-api (pyproject.toml)
324339
pycparser==2.22
325340
# via cffi
326-
pydantic==2.11.5
341+
pydantic==2.11.7
327342
# via
328343
# emmet-core
329344
# maggma
@@ -343,9 +358,10 @@ pygments==2.19.1
343358
# ipython
344359
# ipython-pygments-lexers
345360
# pytest
361+
# sphinx
346362
pyisemail==2.0.1
347363
# via mpcontribs-client
348-
pymatgen==2025.5.28
364+
pymatgen==2025.6.14
349365
# via
350366
# emmet-core
351367
# matminer
@@ -382,7 +398,7 @@ pytest==8.4.0
382398
# solvation-analysis
383399
pytest-asyncio==1.0.0
384400
# via mp-api (pyproject.toml)
385-
pytest-cov==6.1.1
401+
pytest-cov==6.2.1
386402
# via mp-api (pyproject.toml)
387403
pytest-mock==3.14.1
388404
# via mp-api (pyproject.toml)
@@ -409,22 +425,23 @@ pyyaml==6.0.2
409425
# pre-commit
410426
# pybtex
411427
# swagger-spec-validator
412-
pyzmq==26.4.0
428+
pyzmq==27.0.0
413429
# via maggma
414-
rdkit==2025.3.2
430+
rdkit==2025.3.3
415431
# via solvation-analysis
416432
referencing==0.36.2
417433
# via
418434
# jsonschema
419435
# jsonschema-specifications
420-
requests==2.32.3
436+
requests==2.32.4
421437
# via
422438
# bravado
423439
# bravado-core
424440
# matminer
425441
# mp-api (pyproject.toml)
426442
# pymatgen
427443
# requests-futures
444+
# sphinx
428445
requests-futures==1.0.2
429446
# via mpcontribs-client
430447
rfc3339-validator==0.1.4
@@ -433,11 +450,13 @@ rfc3986-validator==0.1.1
433450
# via jsonschema
434451
robocrys==0.2.11
435452
# via emmet-core
453+
roman-numerals-py==3.1.0
454+
# via sphinx
436455
rpds-py==0.25.1
437456
# via
438457
# jsonschema
439458
# referencing
440-
ruamel-yaml==0.18.12
459+
ruamel-yaml==0.18.14
441460
# via
442461
# custodian
443462
# maggma
@@ -487,13 +506,29 @@ six==1.17.0
487506
# rfc3339-validator
488507
smart-open==7.1.0
489508
# via mp-api (pyproject.toml)
509+
snowballstemmer==3.0.1
510+
# via sphinx
490511
solvation-analysis==0.4.1
491512
# via emmet-core
492513
spglib==2.6.0
493514
# via
494515
# pymatgen
495516
# robocrys
496517
# seekpath
518+
sphinx==8.2.3
519+
# via mp-api (pyproject.toml)
520+
sphinxcontrib-applehelp==2.0.0
521+
# via sphinx
522+
sphinxcontrib-devhelp==2.0.0
523+
# via sphinx
524+
sphinxcontrib-htmlhelp==2.1.0
525+
# via sphinx
526+
sphinxcontrib-jsmath==1.0.1
527+
# via sphinx
528+
sphinxcontrib-qthelp==2.0.0
529+
# via sphinx
530+
sphinxcontrib-serializinghtml==2.0.0
531+
# via sphinx
497532
sshtunnel==0.4.0
498533
# via maggma
499534
stack-data==0.6.3
@@ -516,7 +551,7 @@ threadpoolctl==3.6.0
516551
# scikit-learn
517552
tidynamics==1.1.2
518553
# via transport-analysis
519-
tifffile==2025.6.1
554+
tifffile==2025.6.11
520555
# via scikit-image
521556
tqdm==4.67.1
522557
# via
@@ -535,7 +570,7 @@ typeguard==4.4.3
535570
# via inflect
536571
types-python-dateutil==2.9.0.20250516
537572
# via arrow
538-
types-requests==2.32.0.20250602
573+
types-requests==2.32.4.20250611
539574
# via mp-api (pyproject.toml)
540575
types-setuptools==80.9.0.20250529
541576
# via mp-api (pyproject.toml)

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