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Merged
esoteric-ephemera merged 1 commit into from
Jan 22, 2026
Merged

Automated dependency upgrades #503

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119 changes: 76 additions & 43 deletions requirements/ubuntu-latest_py3.11.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -6,61 +6,73 @@
#
annotated-types==0.7.0
# via pydantic
asttokens==3.0.1
# via stack-data
bibtexparser==1.4.3
# via pymatgen
blake3==1.0.8
# via emmet-core
blinker==1.9.0
# via flask
boto3==1.40.66
boto3==1.42.33
# via mp-api
botocore==1.40.66
botocore==1.42.33
# via
# boto3
# s3transfer
cachelib==0.13.0
# via flask-caching
certifi==2025.10.5
certifi==2026.1.4
# via requests
charset-normalizer==3.4.4
# via requests
click==8.3.0
click==8.3.1
# via flask
contourpy==1.3.3
# via matplotlib
cycler==0.12.1
# via matplotlib
dash==3.2.0
dash==3.4.0
# via crystal_toolkit (pyproject.toml)
dash-mp-components==0.5.0rc0
# via crystal_toolkit (pyproject.toml)
emmet-core==0.86.0rc1
decorator==5.2.1
# via ipython
emmet-core==0.86.2
# via mp-api
executing==2.2.1
# via stack-data
flask==3.1.2
# via
# dash
# flask-caching
flask-caching==2.3.1
# via crystal_toolkit (pyproject.toml)
fonttools==4.60.1
fonttools==4.61.1
# via matplotlib
frozendict==2.4.6
frozendict==2.4.7
# via crystal_toolkit (pyproject.toml)
idna==3.11
# via requests
imageio==2.37.2
# via scikit-image
importlib-metadata==8.7.0
importlib-metadata==8.7.1
# via dash
ipython==9.9.0
# via crystal_toolkit (pyproject.toml)
ipython-pygments-lexers==1.1.1
# via ipython
itsdangerous==2.2.0
# via flask
jedi==0.19.2
# via ipython
jinja2==3.1.6
# via flask
jmespath==1.0.1
jmespath==1.1.0
# via
# boto3
# botocore
joblib==1.5.2
joblib==1.5.3
# via
# pymatgen
# scikit-learn
Expand All @@ -75,28 +87,30 @@ markupsafe==3.0.3
# flask
# jinja2
# werkzeug
matplotlib==3.10.7
matplotlib==3.10.8
# via pymatgen
matplotlib-inline==0.2.1
# via ipython
monty==2025.3.3
# via
# emmet-core
# mp-api
# pymatgen
mp-api==0.45.12
mp-api==0.45.15
# via crystal_toolkit (pyproject.toml)
mpmath==1.3.0
# via sympy
msgpack==1.1.2
# via mp-api
narwhals==2.10.2
narwhals==2.15.0
# via plotly
nest-asyncio==1.6.0
# via dash
networkx==3.5
networkx==3.6.1
# via
# pymatgen
# scikit-image
numpy==2.3.4
numpy==2.4.1
# via
# contourpy
# imageio
Expand All @@ -111,41 +125,57 @@ numpy==2.3.4
# shapely
# spglib
# tifffile
orjson==3.11.4
# via pymatgen
packaging==25.0
orjson==3.11.5
# via
# mp-api
# pymatgen
packaging==26.0
# via
# lazy-loader
# matplotlib
# plotly
# scikit-image
palettable==3.3.3
# via pymatgen
pandas==2.3.3
pandas==3.0.0
# via pymatgen
pillow==12.0.0
parso==0.8.5
# via jedi
pexpect==4.9.0
# via ipython
pillow==12.1.0
# via
# imageio
# matplotlib
# scikit-image
plotly==6.4.0
plotly==6.5.2
# via
# dash
# pymatgen
prompt-toolkit==3.0.52
# via ipython
ptyprocess==0.7.0
# via pexpect
pure-eval==0.2.3
# via stack-data
pybtex==0.25.1
# via emmet-core
pydantic==2.12.3
pydantic==2.12.5
# via
# emmet-core
# pydantic-settings
# pymatgen-io-validation
pydantic-core==2.41.4
pydantic-core==2.41.5
# via pydantic
pydantic-settings==2.11.0
pydantic-settings==2.12.0
# via
# crystal_toolkit (pyproject.toml)
# emmet-core
# pymatgen-io-validation
pygments==2.19.2
# via
# ipython
# ipython-pygments-lexers
pymatgen==2025.10.7
# via
# crystal_toolkit (pyproject.toml)
Expand All @@ -154,7 +184,7 @@ pymatgen==2025.10.7
# pymatgen-io-validation
pymatgen-io-validation==0.1.2
# via emmet-core
pyparsing==3.2.5
pyparsing==3.3.2
# via
# bibtexparser
# matplotlib
Expand All @@ -165,8 +195,6 @@ python-dateutil==2.9.0.post0
# pandas
python-dotenv==1.2.1
# via pydantic-settings
pytz==2025.2
# via pandas
pyyaml==6.0.3
# via pybtex
requests==2.32.5
Expand All @@ -177,19 +205,17 @@ requests==2.32.5
# pymatgen-io-validation
retrying==1.4.2
# via dash
ruamel-yaml==0.18.16
ruamel-yaml==0.19.1
# via
# monty
# pymatgen
ruamel-yaml-clib==0.2.14
# via ruamel-yaml
s3transfer==0.14.0
s3transfer==0.16.0
# via boto3
scikit-image==0.25.2
scikit-image==0.26.0
# via crystal_toolkit (pyproject.toml)
scikit-learn==1.7.2
scikit-learn==1.8.0
# via crystal_toolkit (pyproject.toml)
scipy==1.16.3
scipy==1.17.0
# via
# pymatgen
# scikit-image
Expand All @@ -198,25 +224,32 @@ shapely==2.1.2
# via crystal_toolkit (pyproject.toml)
six==1.17.0
# via python-dateutil
smart-open==7.4.4
smart-open==7.5.0
# via mp-api
spglib==2.6.0
spglib==2.7.0
# via pymatgen
stack-data==0.6.3
# via ipython
sympy==1.14.0
# via pymatgen
tabulate==0.9.0
# via pymatgen
threadpoolctl==3.6.0
# via scikit-learn
tifffile==2025.10.16
tifffile==2026.1.14
# via scikit-image
tqdm==4.67.1
# via pymatgen
traitlets==5.14.3
# via
# ipython
# matplotlib-inline
typing-extensions==4.15.0
# via
# blake3
# dash
# emmet-core
# ipython
# mp-api
# pydantic
# pydantic-core
Expand All @@ -226,21 +259,21 @@ typing-inspection==0.4.2
# via
# pydantic
# pydantic-settings
tzdata==2025.2
# via pandas
uncertainties==3.2.3
# via pymatgen
urllib3==2.5.0
urllib3==2.6.3
# via
# botocore
# requests
wcwidth==0.3.0
# via prompt-toolkit
webcolors==25.10.0
# via crystal_toolkit (pyproject.toml)
werkzeug==3.1.3
werkzeug==3.1.5
# via
# dash
# flask
wrapt==2.0.0
wrapt==2.0.1
# via smart-open
zipp==3.23.0
# via importlib-metadata
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