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2 changes: 0 additions & 2 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -14,8 +14,6 @@ COPY requirements.txt app/requirements.txt
RUN pip install --upgrade pip
RUN pip install -r app/requirements.txt

RUN git clone https://github.com/dvitale199/GenoTools && cd GenoTools && pip install .

#Copy all files in current directory into app directory
COPY . /app

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21 changes: 20 additions & 1 deletion utils/hold_data.py
Original file line number Diff line number Diff line change
Expand Up @@ -97,7 +97,26 @@ def release_callback():

def release_select():
st.sidebar.markdown("### **Choose a release!**")
release_options = [10] # can replace with master key reference

# Get available releases from GCS bucket
bucket = get_gcloud_bucket("genotools-server")
prefix = "cohort_browser/nba/"
blobs = bucket.list_blobs(prefix=prefix, delimiter="/")

# Iterate through folders
list(blobs)
release_options = []
for prefix_path in blobs.prefixes:
folder_name = prefix_path.rstrip("/").split("/")[-1]
if folder_name.startswith("release"):
try:
release_num = int(folder_name.replace("release", ""))
release_options.append(release_num)
except ValueError:
continue

# Sort in descending order
release_options = sorted(release_options, reverse=True)

if "release_choice" not in st.session_state:
st.session_state["release_choice"] = release_options[0]
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