Merge branch 'main' into doc-ref-channel-clarification

Author: Dpereaptkhamur-13

.github/workflows/autofix.yml

@@ -21,4 +21,4 @@ jobs:
       - run: pip install --upgrade towncrier pygithub gitpython numpy
       - run: python ./.github/actions/rename_towncrier/rename_towncrier.py
       - run: python ./tools/dev/ensure_headers.py
-      - uses: autofix-ci/action@7a166d7532b277f34e16238930461bf77f9d7ed8
+      - uses: autofix-ci/action@c5b2d67aa2274e7b5a18224e8171550871fc7e4a

.github/workflows/codeql-analysis.yml

@@ -44,7 +44,7 @@ jobs:
 
     # Initializes the CodeQL tools for scanning.
     - name: Initialize CodeQL
-      uses: github/codeql-action/init@v4.35.1
+      uses: github/codeql-action/init@v4.35.2
       with:
         languages: ${{ matrix.language }}
         # If you wish to specify custom queries, you can do so here or in a config file.
@@ -58,7 +58,7 @@ jobs:
     # Autobuild attempts to build any compiled languages  (C/C++, C#, or Java).
     # If this step fails, then you should remove it and run the build manually (see below)
     - name: Autobuild
-      uses: github/codeql-action/autobuild@v4.35.1
+      uses: github/codeql-action/autobuild@v4.35.2
 
     # ℹ️ Command-line programs to run using the OS shell.
     # 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun
@@ -71,4 +71,4 @@ jobs:
     #   ./location_of_script_within_repo/buildscript.sh
 
     - name: Perform CodeQL Analysis
-      uses: github/codeql-action/analyze@v4.35.1
+      uses: github/codeql-action/analyze@v4.35.2

.github/workflows/spec_zero.yml

@@ -41,7 +41,7 @@ jobs:
         timeout-minutes: 10
         with:
           detached: true
-      - uses: astral-sh/setup-uv@v8.0.0
+      - uses: astral-sh/setup-uv@v8.1.0
         with:
           version: ">=0.9"
           activate-environment: true

.github/workflows/tests.yml

@@ -154,7 +154,7 @@ jobs:
         if: matrix.kind == 'conda' || matrix.kind == 'mamba'
         timeout-minutes: 20
       # Python (if old)
-      - uses: astral-sh/setup-uv@v8.0.0
+      - uses: astral-sh/setup-uv@v8.1.0
         with:
           version: ">=0.9"
           activate-environment: true

.pre-commit-config.yaml

@@ -1,7 +1,7 @@
 repos:
   # Ruff mne
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.11
+    rev: v0.15.12
     hooks:
       - id: ruff-check
         name: ruff lint mne

azure-pipelines.yml

@@ -133,7 +133,7 @@ stages:
               key: $(testing_version)
               path: /home/vsts/mne_data
             displayName: 'Cache testing data'
-          - script: python -c "import mne; mne.datasets.testing.data_path(verbose=True)"
+          - bash: ./tools/github_actions_download.sh
             displayName: 'Get test data'
           - script: pytest -m "ultraslowtest or pgtest" --tb=short --cov=mne --cov-report=xml -vv mne
             displayName: 'slow and mne-qt-browser tests'
@@ -188,7 +188,7 @@ stages:
               key: $(testing_version)
               path: /home/vsts/mne_data
             displayName: 'Cache testing data'
-          - script: python -c "import mne; mne.datasets.testing.data_path(verbose=True)"
+          - bash: ./tools/github_actions_download.sh
             displayName: 'Get test data'
           - bash: |
               set -eo pipefail
@@ -285,7 +285,7 @@ stages:
               key: $(testing_version)
               path: C:\Users\VssAdministrator\mne_data
             displayName: 'Cache testing data'
-          - script: python -c "import mne; mne.datasets.testing.data_path(verbose=True)"
+          - bash: ./tools/github_actions_download.sh
             displayName: 'Get test data'
           - script: pytest -m "not (slowtest or pgtest)" --tb=short --cov=mne --cov-report=xml -vv mne
             displayName: 'Run tests'

doc/changes/dev/13263.newfeature.rst

@@ -0,0 +1 @@
+It is now possible to concatenate raw objects with :func:`mne.concatenate_raws` as long as they inherit from :class:`~mne.io.BaseRaw`, even if their specific types differ (e.g., :class:`~mne.io.Raw` and :class:`~mne.io.RawArray`), by `Clemens Brunner`_.

doc/changes/dev/13847.other.rst

@@ -0,0 +1 @@
+Added a helper to split colocated OPM overlap sets into radial and tangential channel groups, and updated topomap regression coverage to use shared triaxial OPM fixtures, by `Pragnya Khandelwal`_.

doc/changes/dev/13855.bugfix.rst

@@ -0,0 +1,3 @@
+Fixed incorrect label orientation for nodes in the 0–90° polar range (the
+12–3 o'clock quadrant) of the connectivity circle plot, by
+:newcontrib:`Pavel Popov`.

doc/changes/dev/13856.bugfix.rst

@@ -0,0 +1 @@
+Fixed an indexing bug in fNIRS support in :meth:`mne.io.BaseRaw.interpolate_bads` (and related methods) that could errantly use incorrect donor channels, by :newcontrib:`Kalle Makela`.