Make the test check for INVALID message (#13)

irm-codebase · web-flow · commit 44a537eda7c8 · 2025-04-01T17:12:40.000+02:00
* Make the test check for INVALID message
diff --git a/copier.yaml b/copier.yaml
@@ -22,7 +22,6 @@ _skip_if_exists:
   - results/**
   - tests/**
   - workflow/**
-  - .gitignore
   - .readthedocs.yaml
   - AUTHORS
   - CITATION.cff
diff --git a/template/.github/workflows/check-version.yml b/template/.github/workflows/check-version.yml
@@ -1,4 +1,4 @@
-# Check for changes in the upstream template. If changes are found, a comment is added to the PR.
+# Check for changes in the upstream template. If changes are found, an issue is created
 name: Template check.
 on:
   schedule:
diff --git a/template/tests/clio_test.py.jinja b/template/tests/clio_test.py.jinja
@@ -42,7 +42,7 @@ def test_snakemake_all_failure(module_path):
     process = subprocess.run(
         "snakemake", shell=True, cwd=module_path, capture_output=True
     )
-    assert "This workflow must be called as a snakemake module" in str(process.stderr)
+    assert "INVALID (missing locally)" in str(process.stderr)
 
 
 def test_snakemake_integration_testing(module_path):

Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,4 @@`
`1`		`-# Check for changes in the upstream template. If changes are found, a comment is added to the PR.`
	`1`	`+# Check for changes in the upstream template. If changes are found, an issue is created`
`2`	`2`	`name: Template check.`
`3`	`3`	`on:`
`4`	`4`	`schedule:`
Original file line number	Diff line number	Diff line change
`@@ -42,7 +42,7 @@ def test_snakemake_all_failure(module_path):`
`42`	`42`	`process = subprocess.run(`
`43`	`43`	`"snakemake", shell=True, cwd=module_path, capture_output=True`
`44`	`44`	`)`
`45`		`- assert "This workflow must be called as a snakemake module" in str(process.stderr)`
	`45`	`+ assert "INVALID (missing locally)" in str(process.stderr)`
`46`	`46`
`47`	`47`
`48`	`48`	`def test_snakemake_integration_testing(module_path):`