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User must manually download WDPA
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workflow/internal/settings.yaml

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@@ -4,20 +4,9 @@ resources:
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##
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# Links for automatically downloaded files
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##
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# Slope
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# 60m version:
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# slope: "https://s3.opengeohub.org/global/dtm/v3/slope.in.degree_edtm_m_60m_s_20000101_20221231_go_epsg.4326_v20241230.tif"
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# 120m version:
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# slope: "https://zenodo.org/records/14920379/files/slope.in.degree_edtm_m_120m_s_20000101_20221231_go_epsg.4326_v20241230.tif"
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# 240m version:
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slope: "https://zenodo.org/records/14920379/files/slope.in.degree_edtm_m_240m_s_20000101_20221231_go_epsg.4326_v20241230.tif"
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bathymetry: "https://zenodo.org/records/15741950/files/gebco_2024_sub_ice_cog.tif"
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# Land cover
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globcover: "https://due.esrin.esa.int/files/Globcover2009_V2.3_Global_.zip"
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globcover_landcover_tif: "GLOBCOVER_L4_200901_200912_V2.3.tif"
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# Built-up areas
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ghsl: "https://jeodpp.jrc.ec.europa.eu/ftp/jrc-opendata/GHSL/GHS_BUILT_S_GLOBE_R2023A/GHS_BUILT_S_E2025_GLOBE_R2023A_4326_30ss/V1-0/GHS_BUILT_S_E2025_GLOBE_R2023A_4326_30ss_V1_0.zip"
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ghsl_tif: "GHS_BUILT_S_E2025_GLOBE_R2023A_4326_30ss_V1_0.tif"
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# Protected areas
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wdpa: "https://d1gam3xoknrgr2.cloudfront.net/current/WDPA_Jun2025_Public.zip"
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wdpa_gdb: "WDPA_Jun2025_Public.gdb"

workflow/rules/automatic.smk

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@@ -24,37 +24,6 @@ rule download_cutout_bathymetry:
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wrapper:
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"v7.2.0/geo/rasterio/clip-geotiff"
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rule download_wdpa:
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message:
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"Download the WDPA (World Database on Protected Areas) data (~1.5 GB)."
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params:
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url=internal["resources"]["automatic"]["wdpa"],
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output:
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"resources/automatic/global/wdpa.zip",
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conda:
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"../envs/shell.yaml"
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shell:
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'curl -sSLo {output} "{params.url}"'
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rule unzip_wdpa:
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message:
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"Unzip the WDPA (World Database on Protected Areas) data (~2.0 GB)."
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params:
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target=internal["resources"]["automatic"]["wdpa_gdb"],
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input:
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rules.download_wdpa.output,
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output:
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directory("resources/automatic/global/wdpa.gdb"),
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conda:
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"../envs/shell.yaml"
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shell:
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"""
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temp_dir=$(mktemp -d)
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unzip {input} -d $temp_dir
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mv $temp_dir/{params.target} {output}
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rm -R $temp_dir
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"""
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rule download_globcover:
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message:
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"Download the GlobCover land cover data (~380 MB)."

workflow/rules/process.smk

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@@ -8,7 +8,7 @@ rule prepare_resampled_inputs:
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slope_path=rules.download_cutout_slope.output,
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settlement_path=rules.cutout_settlement.output,
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bathymetry_path=rules.download_cutout_bathymetry.output,
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protected_area_path=rules.unzip_wdpa.output,
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protected_area_path="resources/user/wdpa.gdb",
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output:
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resampled_input="resources/automatic/{shape}.resampled_inputs.nc",
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plot=report(

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