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JavaDoc Updates (#81)
Fix previous build (which overrode change #79) + add newest updated JavaDocs
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‎docs/allclasses-frame.html‎

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<li><a href="biolockj/exception/ConfigPathException.html" title="class in biolockj.exception" target="classFrame">ConfigPathException</a></li>
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<li><a href="biolockj/exception/ConfigViolationException.html" title="class in biolockj.exception" target="classFrame">ConfigViolationException</a></li>
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<li><a href="biolockj/module/DatabaseModule.html" title="interface in biolockj.module" target="classFrame"><span class="interfaceName">DatabaseModule</span></a></li>
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<li><a href="biolockj/util/DockerUtil.html" title="class in biolockj.util" target="classFrame">DockerUtil</a></li>

‎docs/allclasses-noframe.html‎

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‎docs/biolockj/BioLockJ.html‎

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<td class="colFirst"><code>protected static void</code></td>
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<td class="colLast"><code><span class="memberNameLink"><a href="../biolockj/BioLockJ.html#copyInputData--">copyInputData</a></span>()</code>
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<div class="block">Create a copy of the sequence files in property <a href="../biolockj/Constants.html#INPUT_DIRS">"input.dirPaths"</a>, output to a directory
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named <a href="../biolockj/Constants.html#PIPELINE_DIR">"pipeline.pipelineDir"</a>/input.</div>
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<td class="colLast"><code><span class="memberNameLink"><a href="../biolockj/BioLockJ.html#createPipelineDirectory--">createPipelineDirectory</a></span>()</code>
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Otherwise execute <a href="../biolockj/Pipeline.html#runPipeline--"><code>Pipeline.runPipeline()</code></a> and save MASTER <a href="../biolockj/Config.html" title="class in biolockj"><code>Config</code></a>
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‎docs/biolockj/BioModuleFactory.html‎

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<dd><code><a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Exception.html?is-external=true" title="class or interface in java.lang">Exception</a></code> - if errors occur</dd>
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@@ -1251,23 +1268,6 @@ <h4>initProjectProps</h4>
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<h4>setPipelineDir</h4>
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throws <a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Exception.html?is-external=true" title="class or interface in java.lang">Exception</a></pre>
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<div class="block">Set the root pipeline directory path</div>
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<dt><span class="paramLabel">Parameters:</span></dt>
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<dd><code>dir</code> - Pipeline directory path</dd>
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<dd><code><a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Exception.html?is-external=true" title="class or interface in java.lang">Exception</a></code> - if errors occur</dd>
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