Commit 3fac429
Submodule command_line_tools updated 26 files
- README.md+5-7
- __init__.py+1-1
- abra2_2.17/abra2_2.17.cwl+2-1
- cwl_commandlinetools/__init__.py+1-1
- docs/SUMMARY.md+2
- manta_1.5.1/README.md+69
- manta_1.5.1/container/Dockerfile+83
- manta_1.5.1/example_inputs.yaml+10
- manta_1.5.1/manta_1.5.1.cwl+177
- marianas_collapsing_first_pass_1.8.1/marianas_first_pass.cwl+2-13
- marianas_collapsing_second_pass_1.8.1/marianas_second_pass.cwl+2-13
- marianas_process_loop_umi_1.8.1/marianas_process_loop_umi.cwl+2-13
- marianas_separate_bams_1.8.1/marianas_separate_bams_1.8.1.cwl+3-2
- merge_fastq_0.1.7/merge_fastq_0.1.7.cwl+1-1
- mutect_1.1.5/mutect_1.1.5.cwl+167-183
- picard_add_or_replace_read_groups_1.96/picard_add_or_replace_read_groups_1.96.cwl+2-2
- picard_collect_alignment_summary_metrics_2.21.2/picard_collect_alignment_summary_metrics_2.21.2.cwl+3-2
- picard_collectmultiplemetric_2.8.1/picard_collectmultiplemetrics_2-8-1.cwl+1-1
- picard_fix_mate_information_1.96/picard_fix_mate_information_1.96.cwl+3-3
- picard_mark_duplicates_1.96/picard_mark_duplicates_1.96.cwl+3-2
- picard_mark_duplicates_2.8.1/picard_mark_duplicates_2.8.1.cwl+1-1
- setup.cfg+1-2
- setup.py+1-1
- trim_galore_0.6.2/trim_galore_0.6.2.cwl+1-1
- waltz_count_reads_3.1.1/waltz_count_reads_3.1.1.cwl+3-4
- waltz_pileupmatrices_3.1.1/waltz_pileupmatrices_3.1.1.cwl+3-5
0 commit comments