Github Action: Lint Notebooks

github-action · github-action · commit 47abd64019f8 · 2025-05-02T21:21:16.000Z
diff --git a/module_notebooks/05-indexing-graphs-with-vg.ipynb b/module_notebooks/05-indexing-graphs-with-vg.ipynb
@@ -423,12 +423,6 @@
   }
  ],
  "metadata": {
-  "environment": {
-   "kernel": "conda-env-nigms-pangenomics-nigms-pangenomics",
-   "name": "workbench-notebooks.m127",
-   "type": "gcloud",
-   "uri": "us-docker.pkg.dev/deeplearning-platform-release/gcr.io/workbench-notebooks:m127"
-  },
   "kernelspec": {
    "display_name": "nigms-pangenomics",
    "language": "python",
diff --git a/module_notebooks/06-read-mapping-with-vg.ipynb b/module_notebooks/06-read-mapping-with-vg.ipynb
@@ -511,12 +511,6 @@
   }
  ],
  "metadata": {
-  "environment": {
-   "kernel": "conda-env-nigms-pangenomics-nigms-pangenomics",
-   "name": "workbench-notebooks.m127",
-   "type": "gcloud",
-   "uri": "us-docker.pkg.dev/deeplearning-platform-release/gcr.io/workbench-notebooks:m127"
-  },
   "kernelspec": {
    "display_name": "nigms-pangenomics",
    "language": "python",
diff --git a/module_notebooks/07-variant-calling-with-vg.ipynb b/module_notebooks/07-variant-calling-with-vg.ipynb
@@ -702,12 +702,6 @@
   }
  ],
  "metadata": {
-  "environment": {
-   "kernel": "conda-env-nigms-pangenomics-nigms-pangenomics",
-   "name": "workbench-notebooks.m127",
-   "type": "gcloud",
-   "uri": "us-docker.pkg.dev/deeplearning-platform-release/gcr.io/workbench-notebooks:m127"
-  },
   "kernelspec": {
    "display_name": "nigms-pangenomics",
    "language": "python",
