Fixed blast output table to match versions

Author: joannmudge

module_notebooks/03-searching-graphs-with-blast.ipynb

@@ -267,19 +267,19 @@
    "source": [
     "| qseqid | sseqid | pident  | length | mismatch | gapopen | qstart | qend | sstart | send | evalue   | bitscore |\n",
     "|--------|--------|---------|--------|----------|---------|--------|------|--------|------|----------|----------|\n",
-    "| CUP1   | 7641   | 100.000 | 186    | 0        | 0       | 1      | 186  | 456    | 271  | 9.35e-97 | 344      |\n",
-    "| CUP1   | 7460   | 100.000 | 186    | 0        | 0       | 1      | 186  | 1524   | 1339 | 9.35e-97 | 344      |\n",
-    "| CUP1   | 7460   | 100.000 | 186    | 0        | 0       | 1      | 186  | 5523   | 5338 | 9.35e-97 | 344      |\n",
-    "| CUP1   | 7460   | 100.000 | 186    | 0        | 0       | 1      | 186  | 7521   | 7336 | 9.35e-97 | 344      |\n",
-    "| CUP1   | 7460   | 99.462  | 186    | 0        | 1       | 1      | 186  | 3521   | 3337 | 1.56e-94 | 337      |\n",
-    "| CUP1   | 7518   | 99.457  | 184    | 1        | 0       | 1      | 184  | 1130   | 947  | 5.63e-94 | 335      |\n",
-    "| CUP1   | 7593   | 100.000 | 164    | 0        | 0       | 1      | 164  | 164    | 1    | 1.59e-84 | 303      |\n",
-    "| CUP1   | 7535   | 100.000 | 164    | 0        | 0       | 1      | 164  | 164    | 1    | 1.59e-84 | 303      |\n",
-    "| CUP1   | 7477   | 100.000 | 164    | 0        | 0       | 1      | 164  | 164    | 1    | 1.59e-84 | 303      |\n",
-    "| CUP1   | 7443   | 100.000 | 164    | 0        | 0       | 1      | 164  | 164    | 1    | 1.59e-84 | 303      |\n",
-    "| CUP1   | 7383   | 100.000 | 164    | 0        | 0       | 1      | 164  | 164    | 1    | 1.59e-84 | 303      |\n",
-    "| CUP1   | 7347   | 100.000 | 134    | 0        | 0       | 31     | 164  | 134    | 1    | 7.54e-68 | 248      |\n",
-    "| CUP1   | 7350   | 100.000 | 29     | 0        | 0       | 1      | 29   | 29     | 1    | 1.76e-09 | 54.7     |"
+    "| CUP1 | 7532 | 100.000 | 186 | 0 | 0 | 1  | 186 | 456  | 271  | 9.40e-97 | 344  |\n",
+    "| CUP1 | 7351 | 100.000 | 186 | 0 | 0 | 1  | 186 | 1524 | 1339 | 9.40e-97 | 344  |\n",
+    "| CUP1 | 7351 | 100.000 | 186 | 0 | 0 | 1  | 186 | 5523 | 5338 | 9.40e-97 | 344  |\n",
+    "| CUP1 | 7351 | 100.000 | 186 | 0 | 0 | 1  | 186 | 7521 | 7336 | 9.40e-97 | 344  |\n",
+    "| CUP1 | 7351 | 99.462  | 186 | 0 | 1 | 1  | 186 | 3521 | 3337 | 1.57e-94 | 337  |\n",
+    "| CUP1 | 7409 | 99.457  | 184 | 1 | 0 | 1  | 184 | 1130 | 947  | 5.66e-94 | 335  |\n",
+    "| CUP1 | 7484 | 100.000 | 164 | 0 | 0 | 1  | 164 | 164  | 1    | 1.60e-84 | 303  |\n",
+    "| CUP1 | 7426 | 100.000 | 164 | 0 | 0 | 1  | 164 | 164  | 1    | 1.60e-84 | 303  |\n",
+    "| CUP1 | 7368 | 100.000 | 164 | 0 | 0 | 1  | 164 | 164  | 1    | 1.60e-84 | 303  |\n",
+    "| CUP1 | 7334 | 100.000 | 164 | 0 | 0 | 1  | 164 | 164  | 1    | 1.60e-84 | 303  |\n",
+    "| CUP1 | 7274 | 100.000 | 164 | 0 | 0 | 1  | 164 | 164  | 1    | 1.60e-84 | 303  |\n",
+    "| CUP1 | 7238 | 100.000 | 134 | 0 | 0 | 31 | 164 | 134  | 1    | 7.58e-68 | 248  |\n",
+    "| CUP1 | 7241 | 100.000 | 29  | 0 | 0 | 1  | 29  | 29   | 1    | 1.77e-09 | 54.7 |"
    ]
   },
   {
@@ -327,6 +327,12 @@
   }
  ],
  "metadata": {
+  "environment": {
+   "kernel": "conda-env-nigms-pangenomics-nigms-pangenomics",
+   "name": "workbench-notebooks.m127",
+   "type": "gcloud",
+   "uri": "us-docker.pkg.dev/deeplearning-platform-release/gcr.io/workbench-notebooks:m127"
+  },
   "kernelspec": {
    "display_name": "nigms-pangenomics",
    "language": "python",