Removed zipcode refs from 05

Author: joannmudge

module_notebooks/05-indexing-graphs-with-vg.ipynb

@@ -230,11 +230,9 @@
     "\n",
     "A. *yprp.chrVIII.pggb.giraffe.gbz* - a [GBZ](https://academic.oup.com/bioinformatics/article/38/22/5012/6731924?login=false) format graph that includes a [GBWT](https://github.com/jltsiren/gbwt) index and the corresponding GBWTGraph.\n",
     "\n",
-    "B. *yprp.chrVIII.pggb.shortread.withzip.min* - minimizer index annotated with positions in the distance index.\n",
+    "B. *yprp.chrVIII.pggb.min* - minimizer index annotated with positions in the distance index.\n",
     "\n",
-    "C. *yprp.chrVIII.pggb.shortread.zipcodes* - zipcode file (distance hints).\n",
-    "\n",
-    "D. *yprp.chrVIII.pggb.dist* - minimum distance index.\n"
+    "C. *yprp.chrVIII.pggb.dist* - minimum distance index.\n"
    ]
   },
   {
@@ -425,6 +423,12 @@
   }
  ],
  "metadata": {
+  "environment": {
+   "kernel": "conda-env-nigms-pangenomics-nigms-pangenomics",
+   "name": "workbench-notebooks.m127",
+   "type": "gcloud",
+   "uri": "us-docker.pkg.dev/deeplearning-platform-release/gcr.io/workbench-notebooks:m127"
+  },
   "kernelspec": {
    "display_name": "nigms-pangenomics",
    "language": "python",