Develop#208
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Fix vcf creation lag
Fix bam quals
Fix for single-ended reads
…f-by-one-low-high 187 incorrect numpy rng endpoint off by one low high
…te-output 189 namespace object has no attribute output
…f-by-one-low-high Fixing bug in parse_input_vcf call
198 some minor bugs
Coverage looks much less repetetive now
BAM alignments looking better
Check coverage
added a todo
Docs/readme bioconda
A variety of testing-related changes.
fixing stitch and no fastq
Tables, descriptions, and more.
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Updates, fixes, and the speedups for everything.