Feature/claude assisted tests#263

Merged

joshfactorial merged 15 commits into

feature/claude-assisted-tests

Apr 18, 2026

Commits on Apr 18, 2026

Add comprehensive unit tests for read simulator utilities

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Add unit tests for generate_variants module

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Expand .gitignore with standard Python project entries

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Add unit tests for stitch_outputs module (100% coverage)

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Add unit and integration tests for runner module

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Add unit tests for OutputFileWriter (81–95% coverage)

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Add tests for error_models and single_runner (58 tests)

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Add tests for indel errors, BAM path, runner options, and variant types

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Add targeted tests for generate_variants, error_models, and vcf_func

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Remove duplicate tests and fix vacuous assertions

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Add priority-1 coverage tests for uncovered source lines

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Updating versions
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1. Update README

alermol
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Tests final final_final
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Added neat log isolation so it didn't keep writing test logs into the repo dir
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