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neuroinformatics-unit / datashuttle Public

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[Testing] Test SSH file transfer with images.#208

Merged

JoeZiminski merged 68 commits into

mainneuroinformatics-unit/datashuttle:mainfrom

test_ssh_with_imageneuroinformatics-unit/datashuttle:test_ssh_with_imageCopy head branch name to clipboard

Jul 2, 2025

Conversation Commits68 (68)Checks Files changed

Merged

[Testing] Test SSH file transfer with images.#208
JoeZiminski merged 68 commits into
mainfrom
test_ssh_with_image

Commits

Commits on Jun 21, 2025

lots of changes, sort out.
JoeZiminski
committed
still working, needs a bit more tidying up.
JoeZiminski
committed
Continue working.
JoeZiminski
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
JoeZiminski
committed
Tidy ups.
JoeZiminski
committed
Fix linting.
JoeZiminski
committed
Tidy ups and documentation.
JoeZiminski
committed
Add documentation.
JoeZiminski
committed
Try different Dockerfile for linux.
JoeZiminski
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks

pre-commit-ci[bot]
authored and
JoeZiminski
committed
Fix issue after rebase.
JoeZiminski
committed
Remove breakpoint.
JoeZiminski
committed
Don't use singularity, docker or nothing.
JoeZiminski
committed
Rework ssh setup.
JoeZiminski
committed
Fix connection refused issue.
JoeZiminski
committed
Use run not POpen for actions.
JoeZiminski
committed
try in detachted state.
JoeZiminski
committed
Add error messages on docker setup.
JoeZiminski
committed
run linting.
JoeZiminski
committed
update connection failed error message.
JoeZiminski
committed
Test version working locally on linux but only can connect with sudo.
JoeZiminski
committed
Try freeing up and using the free port.
JoeZiminski
committed
Test sudo service only on linux.
JoeZiminski
committed
Add sudo to docker setup commands.
JoeZiminski
committed
test with auto add policy.
JoeZiminski
committed
Really restrict to the connect call.
JoeZiminski
committed
restrict to tests of interest temporarily.
JoeZiminski
committed
Fix to port 3306 in tests and for paramiko.
JoeZiminski
committed
Extend port to rclone.
JoeZiminski
committed
Use environment variable to set port.
JoeZiminski
committed
Add all OS back.
JoeZiminski
committed
try remove tag for windows.
JoeZiminski
committed
Update docker commands for windows.
JoeZiminski
committed
Fix nonsense docker build command.
JoeZiminski
committed
Only run when docker running and on ubuntu on runners.
JoeZiminski
committed
Try build and run docker only once per session.
JoeZiminski
committed
Teardown image at end of ssh tests, factor out ssh tests.
JoeZiminski
committed
SPlit ssh tests.
JoeZiminski
committed
Add sudo to the docker teardown commands for Linux.
JoeZiminski
committed
try class scope of setup ssh container.
JoeZiminski
committed
Try move ssh fixture to classes.
JoeZiminski
committed
Try a different command to shutdown on linux.
JoeZiminski
committed
Tidy ups and some docs.
JoeZiminski
committed
Extend to macOS.
JoeZiminski
committed
Finish tidying up docstrings.
JoeZiminski
committed
Change ssh test image name and fix docstring.
JoeZiminski
committed
Small tidy ups.
JoeZiminski
committed
Small fixes after rebase.
JoeZiminski
committed
More fix.es
JoeZiminski
committed
Fix CI.
JoeZiminski
committed
Skip tests on macOS.
JoeZiminski
committed
Refactor transfer tests.
JoeZiminski
committed
Continue refactoring.
JoeZiminski
committed
Fix tests again.
JoeZiminski
committed
Update CI script.
JoeZiminski
committed
Update CI.
JoeZiminski
committed
Fix imports after rebase.
JoeZiminski
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot]
committed

Commits on Jun 22, 2025

Merge branch 'main' into test_ssh_with_image
JoeZiminski
committed
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot]
committed

Commits on Jun 23, 2025

Delete config to fix tests.
JoeZiminski
committed
Remove test module that was accidentally readded by git.
JoeZiminski
committed

Commits on Jun 26, 2025

Delete now unused file.
JoeZiminski
committed
Do not append por with : if it is default (22).
JoeZiminski
committed
Move test setup_rclone_config_for_ssh into setup_ssh_connection.
JoeZiminski
committed
Extend SSH tests not run message.
JoeZiminski
committed
Improve test skipped message.
JoeZiminski
committed
Fix duplicate if / else statement.
JoeZiminski
committed

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