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alessandrofelder merged 3 commits into from
May 12, 2026
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Update photon-mosaic description #271

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Update photon-mosaic description (#266)
lauraporta May 5, 2026
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Update docs/source/projects.md
lauraporta May 5, 2026
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Update docs/source/projects.md
lauraporta May 5, 2026
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6 changes: 2 additions & 4 deletions docs/source/projects.md
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Expand Up @@ -62,10 +62,8 @@ test different pipeline configurations.
## Optophysiology
::::{grid} 1 1 1 1
:::{grid-item-card} {fas}`sun;sd-text-primary` photon-mosaic
:link: https://photon-mosaic.neuroinformatics.dev/
photon-mosaic simplifies the analysis of multi-photon calcium imaging data by integrating algorithms from tools like Suite2p and CaImAn into a modular pipeline. Researchers can evaluate, compare, and combine methods for each processing step, such as registration or source extraction, and explore metrics to identify the best fit for their datasets.

With support for local or cluster-based parallelization, photon-mosaic provides visualization tools, reports, and guides to streamline decision-making and enhance reproducibility.
:link: https://github.com/photon-mosaic
`photon-mosaic` is a collaborative project that aims to standardise multiphoton image analysis in neuroscience. Development is currently led by the [Neuroinformatics Unit](https://github.com/neuroinformatics-unit), the [Allen Institute for Neural Dynamics](https://github.com/AllenNeuralDynamics) and the [International Brain Laboratory](https://www.internationalbrainlab.com/).
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