Skip to content

Update reference to blackcap paper and add media section #275

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
alessandrofelder merged 2 commits into from
May 14, 2026
Merged

Update reference to blackcap paper and add media section #275

Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
0b0920d
update blackcap paper
adamltyson May 14, 2026
be28bf4
Add media
adamltyson May 14, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
42 changes: 37 additions & 5 deletions docs/source/publications.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,11 @@
::::{grid} 1 1 1 1
:gutter: 3

:::{grid-item-card}
:link: https://doi.org/10.1016/j.cub.2026.03.034
**Sirmpilatze, N., Felder, A.**, Abdulazhanova, D., Schwigon, L., **Tatarnikov, I.**, Haase, K., Musielak, I., Kobylkov, D., Margrie, T. W., Mouritsen, H., Heyers, D., **Tyson, A. L.**, Weiler, S. (2026) "An open-source three-dimensional digital brain atlas of a migratory bird, the Eurasian blackcap" *Current Biology* 2025.03.04.641293, doi.org/10.1016/j.cub.2026.03.034
:::

:::{grid-item-card}
:link: https://doi.org/10.5281/zenodo.19945701
**Felder, A.**, Chapuis, G., **Tatarnikov, I., Sirmpilatze, N., Tyson, A.** (2026). Mapping the state of neuroscientific software - a vision for collaboration beyond single institutes or labs (1.0). *Zenodo*, doi.org/10.5281/zenodo.19945701
Expand All @@ -16,11 +21,6 @@
Duporge, I., **Minano, S., Sirmpilatze, N., Tatarnikov, I.**, Wolf, S., **Tyson, A. L.**, Rubenstein, D. (2025) "Tracking the Flight: Exploring a Computational Framework for Analyzing Escape Responses in Plains Zebra (Equus quagga)" *arXiv* 2505.16882, doi.org/10.48550/arXiv.2505.16882
:::

:::{grid-item-card}
:link: https://doi.org/10.1101/2025.03.04.641293
**Sirmpilatze, N., Felder, A.**, Abdulazhanova, D., Schwigon, L., Haase, K., Musielak, I., Margrie, T. W., Mouritsen, H., Heyers, D., **Tyson, A. L.**, Weiler, S. (2025) "Mapping the magnetoreceptive brain: A 3D digital atlas of the migratory bird Eurasian blackcap (Sylvia atricapilla)" *bioRxiv* 2025.03.04.641293, doi.org/10.1101/2025.03.04.641293
:::

:::{grid-item-card}
:link: https://doi.org/10.1101/2024.03.06.583699
Domine, C. C. J., Carrasco-Davis, R., Hollingsworth L., **Sirmpilatze, N., Tyson, A. L.**, Jarvis, D., Barry, C., Saxe, A. M. (2024) “NeuralPlayground: A Standardised Environment for Evaluating Models of Hippocampus and Entorhinal Cortex” *bioRxiv*, doi.org/10.1101/2024.03.06.583699
Expand Down Expand Up @@ -100,3 +100,35 @@ Adam Tyson, World Wide Series | Open Neuroscience, May 2021
:::

::::

## Mentions in the media

::::{grid} 1 1 1 1
:gutter: 3

:::{grid-item-card} Scientists map migratory bird brain
:link: https://ucl.ac.uk/news/2026/apr/scientists-map-migratory-bird-brain
UCL News, April 2026
:::
:::{grid-item-card} Scientists map the blackcap bird brain, opening a new era of 3D digital atlases
:link: https://www.sainsburywellcome.org/research-news/scientists-map-blackcap-bird-brain-opening-new-era-3d-digital-atlases
Sainsbury Wellcome Centre, April 2026
:::
:::{grid-item-card} The Neuro – Irv and Helga Cooper Foundation Open Science Prizes: Meet the winners of an exceptional edition
:link: https://www.mcgill.ca/neuro/article/neuro-irv-and-helga-cooper-foundation-open-science-prizes-meet-winners-exceptional-edition
The Neuro (Montreal Neurological Institute-Hospital), October 2025
:::
:::{grid-item-card} The BrainGlobe Initiative wins 2025 International Prize
:link: https://www.sainsburywellcome.org/web/research-news/brainglobe-initiative-wins-2025-international-prize
Sainsbury Wellcome Centre, October 2025
:::
:::{grid-item-card} Mapping the migratory bird brain
:link: https://www.sainsburywellcome.org/web/blog/mapping-migratory-bird-brain
Sainsbury Wellcome Centre, March 2025
:::
:::{grid-item-card} BrainGlobe Initiative celebrates open-source software award
:link: https://www.sainsburywellcome.org/web/blog/brainglobe-initiative-celebrates-open-source-software-award
Sainsbury Wellcome Centre, October 2024
:::

::::
Loading