Supply workspace root to include resolver

Author: bentsherman

build.gradle

@@ -9,6 +9,7 @@ repositories {
   mavenLocal()
   mavenCentral()
   maven { url = "https://s3-eu-west-1.amazonaws.com/maven.seqera.io/releases" }
+  maven { url = "https://s3-eu-west-1.amazonaws.com/maven.seqera.io/snapshots" }
 }
 
 java {

src/main/java/nextflow/lsp/services/script/ScriptAstCache.java

@@ -58,6 +58,8 @@
  */
 public class ScriptAstCache extends ASTNodeCache {
 
+    private Path projectDir;
+
     private GroovyLibCache libCache;
 
     private LanguageServerConfiguration configuration;
@@ -66,6 +68,7 @@ public class ScriptAstCache extends ASTNodeCache {
 
     public ScriptAstCache(String rootUri) {
         super(createCompiler());
+        this.projectDir = rootUri != null ? Path.of(URI.create(rootUri)) : null;
         this.libCache = createLibCache(rootUri);
     }
 
@@ -105,15 +108,15 @@ protected Set<URI> analyze(Set<URI> uris, FileCache fileCache) {
 
         for( var uri : uris ) {
             var source = compiler().getSource(uri);
-            new ModuleResolver(compiler()).resolve(source, (newUri) -> {
+            new ModuleResolver(projectDir, compiler()).resolve(source, (newUri) -> {
                 changedUris.add(newUri);
                 return compiler().createSourceUnit(newUri, fileCache);
             });
         }
 
         // phase 2: include checking
         for( var sourceUnit : getSourceUnits() ) {
-            var visitor = new ResolveIncludeVisitor(sourceUnit, compiler(), uris);
+            var visitor = new ResolveIncludeVisitor(sourceUnit, projectDir, compiler(), uris);
             visitor.visit();
 
             new ResolvePluginIncludeVisitor(sourceUnit, pluginSpecCache).visit();