Create sub-issues for plink module topic channel migrations

[Copilot]

13 plink submodules need to be migrated to use Nextflow topic channels for version outputs, as part of the broader nf-core modules topic channel adoption effort tracked in #10439.

This PR creates individual sub-issues for each plink module to enable parallel contribution by hackathon participants:

• plink/bcf
• plink/epistasis
• plink/exclude
• plink/extract
• plink/fastepistasis
• plink/genome
• plink/gwas
• plink/hwe
• plink/indep
• plink/indeppairwise
• plink/ld
• plink/recode
• plink/vcf

Each sub-issue references #10439 and describes the required changes: replacing path "versions.yml", emit: versions with a topic channel tuple output, updating meta.yml, and regenerating test snapshots per the migration guide.

Warning

Firewall rules blocked me from connecting to one or more addresses (expand for details)

I tried to connect to the following addresses, but was blocked by firewall rules:

• https://api.github.com/graphql
  • Triggering command: /usr/bin/gh gh auth status (http block)
• https://api.github.com/repos/nf-core/modules/issues/10439
  • Triggering command: /usr/bin/curl curl -s -H Authorization: token ****** -H Accept: application/vnd.github.v3+json REDACTED (http block)
• https://api.github.com/user
  • Triggering command: /usr/bin/gh gh api user (http block)
• nf-co.re
  • Triggering command: /home/REDACTED/work/_temp/ghcca-node/node/bin/node /home/REDACTED/work/_temp/ghcca-node/node/bin/node --enable-source-maps /home/REDACTED/work/_temp/copilot-developer-action-main/dist/index.js (dns block)

If you need me to access, download, or install something from one of these locations, you can either:

• Configure Actions setup steps to set up my environment, which run before the firewall is enabled
• Add the appropriate URLs or hosts to the custom allowlist in this repository's Copilot coding agent settings (admins only)

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