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Add gcta/addgrms module#10995

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lyh970817 merged 5 commits into
nf-core:masterfrom
lyh970817:modules/gcta-addgrms-create
May 27, 2026
Merged

Add gcta/addgrms module#10995
lyh970817 merged 5 commits into
nf-core:masterfrom
lyh970817:modules/gcta-addgrms-create

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@lyh970817 lyh970817 commented Mar 21, 2026

This PR adds the gcta/addgrms module, which combines multiple GRMs listed in an MGRM manifest into a single dense GRM.

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Broadcast software version numbers to topic: versions - See version_topics
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • nf-core modules test gcta/addgrms --profile docker
  • nf-core modules test gcta/addgrms --profile singularity
  • nf-core modules test gcta/addgrms --profile conda

@lyh970817 lyh970817 mentioned this pull request Mar 21, 2026
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@lyh970817 lyh970817 force-pushed the modules/gcta-addgrms-create branch from e685b3b to c6d78e2 Compare March 21, 2026 12:52
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famosab commented Apr 8, 2026

Duplicate of #8140 ? @lyh970817 can you check for overlap and if this is a duplicate close the older PR?

@famosab famosab mentioned this pull request Apr 8, 2026
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@lyh970817 lyh970817 force-pushed the modules/gcta-addgrms-create branch from 6778e85 to c3226e0 Compare May 16, 2026 11:01
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Comment thread modules/nf-core/gcta/addgrms/main.nf Outdated
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@lyh970817 lyh970817 force-pushed the modules/gcta-addgrms-create branch from 363708f to 4191fb4 Compare May 21, 2026 13:39
@lyh970817 lyh970817 force-pushed the modules/gcta-addgrms-create branch from 4191fb4 to 5962c65 Compare May 23, 2026 08:22
@lyh970817 lyh970817 force-pushed the modules/gcta-addgrms-create branch from 339f30a to 9ecb62d Compare May 23, 2026 15:53
@lyh970817 lyh970817 requested a review from SPPearce May 24, 2026 12:29
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Duplicate of #8140 ? @lyh970817 can you check for overlap and if this is a duplicate close the older PR?

We're using the same programme but different functionalities so I believe there is no overlap.

@lyh970817 lyh970817 added this pull request to the merge queue May 27, 2026
Merged via the queue into nf-core:master with commit 322f285 May 27, 2026
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@lyh970817 lyh970817 deleted the modules/gcta-addgrms-create branch May 27, 2026 11:23
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3 participants