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nf-core / proteinannotator Public

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Add nf-test configuration and gitignore#42

Merged

olgabot merged 24 commits into

devnf-core/proteinannotator:devfrom

olgabot/add-nf-test-config-v2nf-core/proteinannotator:olgabot/add-nf-test-config-v2Copy head branch name to clipboard

May 14, 2025

Conversation Commits24 (24)Checks Files changed

Merged

Add nf-test configuration and gitignore#42
olgabot merged 24 commits into
devfrom
olgabot/add-nf-test-config-v2

Commits

Commits on May 14, 2025

Add test config from Sarek with @maxulysse's help
olgabot
committed
Ignore hidden .nf-test.log and .nf-test/ directory
olgabot
committed
Update PR template with nf-test commands
olgabot
committed
Ignore pull request template in linting because of nf-test commands
olgabot
committed
Update changelog about nf-tests
olgabot
committed
Move files_unchanged section to be under lint
olgabot
committed
Merge branch 'dev' into olgabot/add-nf-test-config-v2
olgabot
authored
Resolve conflicting lint.files_unchanged keys in .nf-core.yml
olgabot
committed
Get linting to pass
olgabot
committed
Add nf-test for the whole pipeline
olgabot
committed
Remove old "nextflow run" test
olgabot
committed
Ignore missing .github/workflows/ci.yml in nf-core.yml
olgabot
committed
Fix .nf-core.yml validation
olgabot
committed
Don't check for workflow output for now
olgabot
committed
Playing around with meta mapping
olgabot
committed
Trying to get nf tests to work
olgabot
committed
Redo splitfasta for functional annotation
olgabot
committed
Fix nf-test for whole workflow
olgabot
committed
Channel.of fixes everything, thanks @edmundmiller
olgabot
committed
Update description for
olgabot
committed
Get tests for all of proteinannotator to run
olgabot
committed
Fix the input types to use a flat fasta and not an array
olgabot
committed
Add .nf-test-* to .gitignore
olgabot
committed
Add PR link for nf test
olgabot
committed

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