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Merged
vagkaratzas merged 1 commit into from
Feb 9, 2026
Merged

post-release version bump #75

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2 changes: 1 addition & 1 deletion .nf-core.yml
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Expand Up @@ -13,7 +13,7 @@ repository_type: pipeline
template:
author: Olga Botvinnik, Evangelos Karatzas
description: Generation of sequence-level annotations for amino acid sequences
version: 1.0.0
version: 1.1.0dev
force: true
outdir: .
skip_features:
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2 changes: 2 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -3,6 +3,8 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## v1.1.0dev - [date]

## v1.0.0 - Yellow Saiga - [2026/02/09]

Initial release of nf-core/proteinannotator, created with the [nf-core](https://nf-co.re/) template.
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5 changes: 2 additions & 3 deletions README.md
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Expand Up @@ -7,7 +7,7 @@

[![Open in GitHub Codespaces](https://img.shields.io/badge/Open_In_GitHub_Codespaces-black?labelColor=grey&logo=github)](https://github.com/codespaces/new/nf-core/proteinannotator)
[![GitHub Actions CI Status](https://github.com/nf-core/proteinannotator/actions/workflows/nf-test.yml/badge.svg)](https://github.com/nf-core/proteinannotator/actions/workflows/nf-test.yml)
[![GitHub Actions Linting Status](https://github.com/nf-core/proteinannotator/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/proteinannotator/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/proteinannotator/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX)
[![GitHub Actions Linting Status](https://github.com/nf-core/proteinannotator/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/proteinannotator/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/proteinannotator/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.18547735-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.18547735)
[![nf-test](https://img.shields.io/badge/unit_tests-nf--test-337ab7.svg)](https://www.nf-test.com)

[![Nextflow](https://img.shields.io/badge/version-%E2%89%A525.10.0-green?style=flat&logo=nextflow&logoColor=white&color=%230DC09D&link=https%3A%2F%2Fnextflow.io)](https://www.nextflow.io/)
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## Citations

<!-- TODO nf-core: Add citation for pipeline after first release. Uncomment lines below and update Zenodo doi and badge at the top of this file. -->
<!-- If you use nf-core/proteinannotator for your analysis, please cite it using the following doi: [10.5281/zenodo.XXXXXX](https://doi.org/10.5281/zenodo.XXXXXX) -->
If you use nf-core/proteinannotator for your analysis, please cite it using the following doi: [10.5281/zenodo.18547735](https://doi.org/10.5281/zenodo.18547735)

An extensive list of references for the tools used by the pipeline can be found in the [`CITATIONS.md`](CITATIONS.md) file.

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2 changes: 1 addition & 1 deletion assets/multiqc_config.yml
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report_comment: >
This report has been generated by the <a href="https://github.com/nf-core/proteinannotator/releases/tag/1.0.0" target="_blank">nf-core/proteinannotator</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/proteinannotator/1.0.0/docs/output" target="_blank">documentation</a>.
This report has been generated by the <a href="https://github.com/nf-core/proteinannotator/tree/dev" target="_blank">nf-core/proteinannotator</a> analysis pipeline. For information about how to interpret these results, please see the <a href="https://nf-co.re/proteinannotator/dev/docs/output" target="_blank">documentation</a>.
report_section_order:
"nf-core-proteinannotator-methods-description":
order: -1000
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -286,7 +286,7 @@ manifest {
mainScript = 'main.nf'
defaultBranch = 'master'
nextflowVersion = '!>=25.10.0'
version = '1.0.0'
version = '1.1.0dev'
doi = ''
}

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