Skip to content

Actions: number-25/LongTranscriptomics

Actions

nf-core linting

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
linting.yml
101 workflow runs
101 workflow runs

Filter by Event

⌥ + click/return to exclude

Filter by Status

⌥ + click/return to exclude

Filter by Branch

⌥ + click/return to exclude

Filter by Actor

⌥ + click/return to exclude
finished all inputs testing, getting closer to master release, few mo… nf-core linting #156: Commit b0d7be1 pushed by number-25
1m 14s dev
dev
1m 14s
fixing up channel logic, doing more tests nf-core linting #155: Commit 0dd79b6 pushed by number-25
1m 16s dev
dev
1m 16s
workflow tweaks nf-core linting #154: Commit 4a1a1cd pushed by number-25
1m 11s dev
dev
1m 11s
appears that sylph-tax is functional, isoquant taking far too long on… nf-core linting #153: Commit 76779cc pushed by number-25
1m 12s dev
dev
1m 12s
toying more with sylph-tax, rejigging main workflow.nf nf-core linting #152: Commit 22c587b pushed by number-25
1m 22s dev
dev
1m 22s
testing bam input and mapping to transcriptome nf-core linting #151: Commit 7881bd6 pushed by number-25
1m 8s dev
dev
1m 8s
getting closer to testing sylph out, need to index unmapped bam and c… nf-core linting #150: Commit f9c5123 pushed by number-25
1m 8s dev
dev
1m 8s
adding in sylph profiling of unmapped reads, still much to do nf-core linting #149: Commit 92f5838 pushed by number-25
1m 12s dev
dev
1m 12s
fixing bam inputs nf-core linting #148: Commit 2006a41 pushed by number-25
1m 21s dev
dev
1m 21s
mapping to transcriptome tested on full size dataset, bam_input on fu… nf-core linting #147: Commit 83ecfc0 pushed by number-25
1m 19s dev
dev
1m 19s
successfully tested mapping to transcriptome on minmimal test dataset… nf-core linting #146: Commit 992461c pushed by number-25
1m 15s dev
dev
1m 15s
included code to allow for the mapping to the transcriptome, as well … nf-core linting #145: Commit 3bbe235 pushed by number-25
1m 8s dev
dev
1m 8s
Update usage.md nf-core linting #144: Commit f3d0390 pushed by number-25
1m 12s dev
dev
1m 12s
Update README.md nf-core linting #143: Commit 07af139 pushed by number-25
1m 10s dev
dev
1m 10s
validateParams is working, nf-schema plugins are working nf-core linting #142: Commit 951dacc pushed by number-25
1m 18s dev
dev
1m 18s
first push of the year, testing out a full dataset using gzipped inpu… nf-core linting #141: Commit 1677f70 pushed by number-25
1m 14s dev
dev
1m 14s
new version of bambu added into module, not tested yet within worklfo… nf-core linting #140: Commit 549d3b3 pushed by number-25
1m 17s dev
dev
1m 17s
updating config nf-core linting #139: Commit 2b88ddb pushed by number-25
1m 19s dev
dev
1m 19s
some more schema tweaking, help etc - still not functioning as expected nf-core linting #138: Commit 4980e4a pushed by number-25
1m 17s dev
dev
1m 17s
toying with some nf-schema functionality, making small additions, rem… nf-core linting #137: Commit b0aa23a pushed by number-25
1m 14s dev
dev
1m 14s
attempting to implement the nf-schema plugins, still need to do help … nf-core linting #136: Commit 9e2a589 pushed by number-25
1m 14s dev
dev
1m 14s
added software citations to CITATIONS.md nf-core linting #135: Commit ed1df3c pushed by number-25
1m 12s dev
dev
1m 12s
removing all references to sequencing summary (samplesheet input) nf-core linting #134: Commit e87659a pushed by number-25
1m 22s dev
dev
1m 22s
adding cover image nf-core linting #133: Commit 7289a08 pushed by number-25
1m 16s dev
dev
1m 16s
mmmmm nf-core linting #132: Commit 86b45c0 pushed by number-25
1m 15s dev
dev
1m 15s