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docs/usage.md

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@@ -19,7 +19,7 @@ The pipeline will auto-detect whether the sequencing summary files, and reads ar
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A final samplesheet file consisting of long-read data may look something like the one below. This is for **one biological** sample which has been sequenced twice, giving two technical replicates.
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```csv title="samplesheet.csv"
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sample,replicate,read_path
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sample,replicate,reads
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CONTROL1,1,data/long_reads_1.fastq.gz
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CONTROL1,2,data/long_reads_2.fastq.gz
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```
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| ----------- | -------------------------- |
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| `sample` | Sample name. |
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| `replicate` | Technical replicate number |
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| `read_path` | Full path to fastq reads. |
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| `reads` | Full path to fastq reads. |
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An [example samplesheet](../assets/samplesheet.csv) has been provided with the pipeline.
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