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Fix misspelling: "neurectodermal" → "neuroectodermal" for CL:0000133#3604

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Fix misspelling: "neurectodermal" → "neuroectodermal" for CL:0000133#3604
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Copilot AI commented Apr 10, 2026 •
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CL:0000133 used the non-standard spelling "neurectodermal cell" — PubMed returns 111 hits for "neurectodermal" vs 9,941 for "neuroectodermal"; NCIT uses "neuroectodermal cell".

Changes to CL:0000133

  • Label: neurectodermal cell → neuroectodermal cell
  • Exact synonym: neurectoderm cell → neuroectoderm cell
  • Exact synonym added: neurectodermal cell (old label retained for backwards compatibility)
  • term_tracker_item: linked to issue [Typo/Bug] Neurectodermal cell #3595

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[Typo/Bug] Neurectodermal cell #3595
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Fix typo: neurectodermal → neuroectodermal for CL:0000133
0bd45fc 
- Fix label from 'neurectodermal cell' to 'neuroectodermal cell'
- Fix comment heading accordingly
- Fix exact synonym from 'neurectoderm cell' to 'neuroectoderm cell'
- Add old misspelling 'neurectodermal cell' as related synonym for backwards compatibility
- Add term_tracker_item linking to issue #3595

Signed-off-by: GitHub Copilot

Agent-Logs-Url: https://github.com/obophenotype/cell-ontology/sessions/50e52229-f0e4-41ff-8037-8e56f776fb2b

Co-authored-by: RiveraAndrea83 <205639972+RiveraAndrea83@users.noreply.github.com>
Copilot AI changed the title [WIP] Fix typo in CL term for neurectodermal cell Fix misspelling: "neurectodermal" → "neuroectodermal" for CL:0000133 Apr 10, 2026
Copilot AI requested a review from RiveraAndrea83 April 10, 2026 12:06
dosumis
dosumis requested changes Apr 14, 2026
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Make this an exact synonym:

AnnotationAssertion(oboInOwl:hasRelatedSynonym obo:CL_0000133 "neurectodermal cell")

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RiveraAndrea83 commented Apr 20, 2026

@copilot: please change the term from related to exact:AnnotationAssertion(oboInOwl:hasRelatedSynonym obo:CL_0000133 "neurectodermal cell")

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Change 'neurectodermal cell' synonym from related to exact for CL:000…
f48cb11 
…0133

Signed-off-by: GitHub Copilot

Agent-Logs-Url: https://github.com/obophenotype/cell-ontology/sessions/c4ad171b-b1a4-4afb-abbf-1e654da043ea

Co-authored-by: RiveraAndrea83 <205639972+RiveraAndrea83@users.noreply.github.com>
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Copilot AI commented Apr 20, 2026 •
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Make this an exact synonym:

AnnotationAssertion(oboInOwl:hasRelatedSynonym obo:CL_0000133 "neurectodermal cell")...

Done — changed "neurectodermal cell" from hasRelatedSynonym to hasExactSynonym in commit f48cb11.

@copilot: please change the term from related to exact:AnnotationAssertion(oboInOwl:hasRelatedSynonym obo:CL_0000133 "neurectodermal cell")

Done — changed to hasExactSynonym in commit f48cb11.

@github-actions github-actions Bot mentioned this pull request Apr 21, 2026
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@RiveraAndrea83 RiveraAndrea83 marked this pull request as ready for review April 27, 2026 08:27
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RiveraAndrea83 commented Apr 27, 2026

#gogoeditdiff

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github-actions Bot commented Apr 27, 2026

Here's a diff of how these changes impact the classified ontology (on -base file):

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
  • Version IRI: http://purl.obolibrary.org/obo/cl/releases/2026-04-27/cl-base.owl
  • Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-master.owl/cl-base.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/cl/cl-base.owl
  • Version IRI: http://purl.obolibrary.org/obo/cl/releases/2026-04-27/cl-base.owl
  • Loaded from: file:/__w/cell-ontology/cell-ontology/src/ontology/cl-base-pr.owl/cl-base.owl

Ontology imports

Ontology annotations

neurectodermal cell http://purl.obolibrary.org/obo/CL_0000133

Removed

Added

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github-actions Bot commented Apr 27, 2026

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
  • Version IRI: None
  • Loaded from: file:/__w/cell-ontology/cell-ontology/master/src/ontology/cl-edit.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/cl.owl
  • Version IRI: None
  • Loaded from: file:/__w/cell-ontology/cell-ontology/branch/src/ontology/cl-edit.owl

Ontology imports

Ontology annotations

neuroectodermal cell http://purl.obolibrary.org/obo/CL_0000133

Removed

Added

@github-actions github-actions Bot mentioned this pull request Apr 28, 2026
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@github-actions github-actions Bot mentioned this pull request May 19, 2026
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@dosumis dosumis dosumis requested changes

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[Typo/Bug] Neurectodermal cell

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