Reclassify eyelid as external soft tissue zone with explicit tissue relationships#3643
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Reclassify eyelid as external soft tissue zone with explicit tissue relationships#3643Copilot wants to merge 9 commits into
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Fixes #3640 to correctly classify eyelid as a facial skin
Co-authored-by: dosumis <112839+dosumis@users.noreply.github.com>
- Changed is_a from organ part to external soft tissue zone (UBERON:0034929) - Added has_part relationships for skin of eyelid and palpebral conjunctiva - Follows pattern established by prepuce for multi-tissue surface structures - Addresses feedback on PR #3641 about semantic classification @dragon-ai-agent Co-authored-by: dosumis <112839+dosumis@users.noreply.github.com>
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[WIP] WIP address feedback on eyelid textual definition
Reclassify eyelid as external soft tissue zone with explicit tissue relationships
Jan 5, 2026
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This PR modifies some logical definitions. See details below:Number of classes with modified logical definitions: 5 trabecular sinus of lymph nodeNo changes in inferred subclasses. http://purl.obolibrary.org/obo/UBERON_8500005No changes in inferred subclasses. subcapsular sinus of lymph nodeNo changes in inferred subclasses. electroreceptor organNo changes in inferred subclasses. lateral line sense organNo changes in inferred subclasses. |
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Addresses feedback that eyelid (UBERON:0001711) was semantically incorrect as "zone of skin" - the structure is multi-tissue (skin, muscle, connective tissue, glands, conjunctiva), not just skin.
Changes:
is_afromorgan part→external soft tissue zone(UBERON:0034929)has_part UBERON:0001457(skin of eyelid)has_part UBERON:0001812(palpebral conjunctiva)Follows the prepuce pattern (UBERON:0011374) for multi-tissue surface structures that combine skin with other tissue types.
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