From fefe135fd350079e399cc885ebceb06f78bf49f8 Mon Sep 17 00:00:00 2001 From: Ugur Bayindir Date: Wed, 1 Apr 2026 11:35:18 +0000 Subject: [PATCH 1/6] Update HRA skeleton template and regenerate component ontology --- src/templates/hra-skeleton.template.tsv | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/src/templates/hra-skeleton.template.tsv b/src/templates/hra-skeleton.template.tsv index b10105932..cf88e1175 100644 --- a/src/templates/hra-skeleton.template.tsv +++ b/src/templates/hra-skeleton.template.tsv @@ -1,5 +1,5 @@ -ID LABEL A IAO:0000115 SC % SC BFO:0000050 some % A oboInOwl:hasDbXref SPLIT=| AI oboInOwl:inSubset AT dcterms:date^^xsd:dateTime SC dc:contributor some % SC RO:0002175 some % -ID LABEL A IAO:0000115 SC % SC BFO:0000050 some % A oboInOwl:hasDbXref SPLIT=| AI oboInOwl:inSubset AT dcterms:date^^xsd:dateTime SC dc:contributor some % SC RO:0002175 some % +ID LABEL Definition is_a part_of def_xref In_subset Date Contributor Present_in_taxon +ID LABEL A IAO:0000115 SC % SC BFO:0000050 some % >A oboInOwl:hasDbXref SPLIT=| AI oboInOwl:inSubset AT dcterms:date^^xsd:dateTime AI dcterms:contributor AI RO:0002175 http://purl.obolibrary.org/obo/UBERON_1200005 acromial process of scapula A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly. UBERON:4100000 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/UBERON_1200006 alae of sacrum A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle. UBERON:4100000 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 http://purl.obolibrary.org/obo/UBERON_1200007 alveolar border of mandible A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth. UBERON:0005913 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 From 7384293cc2bf84d2de3630a95abcfcb62a20108c Mon Sep 17 00:00:00 2001 From: Ugur Bayindir Date: Wed, 1 Apr 2026 10:24:03 +0000 Subject: [PATCH 2/6] Update Hra skeletion prefix file --- src/templates/hra-skeleton-prefixes.owl | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/src/templates/hra-skeleton-prefixes.owl b/src/templates/hra-skeleton-prefixes.owl index 0fe583a48..fde5ea69f 100644 --- a/src/templates/hra-skeleton-prefixes.owl +++ b/src/templates/hra-skeleton-prefixes.owl @@ -8,8 +8,11 @@ Prefix(rdfs:=) Ontology( Declaration(ObjectProperty()) -Declaration(ObjectProperty()) -Declaration(ObjectProperty()) +Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) ) From 41001d0be270d5431ed5965bba8c01985443015e Mon Sep 17 00:00:00 2001 From: Ugur Bayindir Date: Wed, 1 Apr 2026 11:16:16 +0000 Subject: [PATCH 3/6] Add Hra skeleton component to uberon-edit file --- src/ontology/uberon-edit.obo | 1 + 1 file changed, 1 insertion(+) diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo index 89a2240e9..82263a8e9 100644 --- a/src/ontology/uberon-edit.obo +++ b/src/ontology/uberon-edit.obo @@ -58,6 +58,7 @@ remark: Aurelie Comte, Bill Bug, Catherine Leroy, Duncan Davidson and Trish Whet import: http://purl.obolibrary.org/obo/uberon/components/disjoint_union_over.owl import: http://purl.obolibrary.org/obo/uberon/components/hra_depiction_3d_images.owl import: http://purl.obolibrary.org/obo/uberon/components/hra_subset.owl +import: http://purl.obolibrary.org/obo/uberon/components/hra_skeleton.owl import: http://purl.obolibrary.org/obo/uberon/components/in-subset.owl import: http://purl.obolibrary.org/obo/uberon/components/mappings.owl import: http://purl.obolibrary.org/obo/uberon/components/vasculature_class.owl From a5bf2834cb79e84242ad75bbcd237cf4242541e5 Mon Sep 17 00:00:00 2001 From: Ugur Bayindir Date: Wed, 1 Apr 2026 11:29:24 +0000 Subject: [PATCH 4/6] Update Hra skeleton template header order --- src/templates/hra-skeleton.template.tsv | 572 ++++++++++++------------ 1 file changed, 286 insertions(+), 286 deletions(-) diff --git a/src/templates/hra-skeleton.template.tsv b/src/templates/hra-skeleton.template.tsv index cf88e1175..5d677c1f8 100644 --- a/src/templates/hra-skeleton.template.tsv +++ b/src/templates/hra-skeleton.template.tsv @@ -1,286 +1,286 @@ -ID LABEL Definition is_a part_of def_xref In_subset Date Contributor Present_in_taxon -ID LABEL A IAO:0000115 SC % SC BFO:0000050 some % >A oboInOwl:hasDbXref SPLIT=| AI oboInOwl:inSubset AT dcterms:date^^xsd:dateTime AI dcterms:contributor AI RO:0002175 -http://purl.obolibrary.org/obo/UBERON_1200005 acromial process of scapula A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly. UBERON:4100000 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200006 alae of sacrum A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle. UBERON:4100000 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200007 alveolar border of mandible A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth. UBERON:0005913 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200008 anterior arch of first cervical vertebra An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface. UBERON:0005814 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200009 anterior clinoid process of sphenoid bone A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery. UBERON:4100000 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200010 anterior gluteal line of ilium of os coxa A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200011 anterior sacral foramina of sacrum A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity. UBERON:0005744 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200012 anterior tubercle of first cervical vertebra A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle. UBERON:4100000 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200013 anterolateral tubercle of tibia A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee. UBERON:4100000 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200014 arcuate line of ilium of os coxa A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200015 articular surface for cuboid bone of calcaneus A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex. UBERON:0005913 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200016 articular tubercle of squamous part of temporal bone A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates. UBERON:4100000 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200017 auricular surface of ilium of os coxa A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200018 base of first distal phalanx of foot A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux. UBERON:0005913 UBERON:0004315 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200019 base of first distal phalanx of hand A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb. UBERON:0005913 UBERON:0004337 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200020 base of first proximal phalanx of foot A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex. UBERON:0005913 UBERON:0004332 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200021 base of first proximal phalanx of hand A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint. UBERON:0005913 UBERON:0004338 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200022 body of calcaneus A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface. UBERON:0005913 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200023 body of second cervical vertebra A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra. UBERON:0001075 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200024 body of sphenoid bone A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface. UBERON:0005913 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200025 calcaneal sulcus of calcaneus A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament. UBERON:0006846 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200026 coccygeal cornu of coccyx A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint. UBERON:4100000 UBERON:0001350 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Coccyx http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200027 coronoid fossa of humerus A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone. UBERON:0004704 UBERON:0000976 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Humerus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200028 costal groove of first rib A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially. UBERON:0006846 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200029 costal groove of twelfth rib A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs. UBERON:0006846 UBERON:0004611 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200030 costal notches of sternum A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7. UBERON:0005913 UBERON:0000975 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200031 crista galla of ethmoid bone A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri. UBERON:4200133 UBERON:0001679 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200032 digastric fossa of mandible A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle. UBERON:0004704 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200033 dorsum sellae of sphenoid bone A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons. UBERON:0005913 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200034 ethmoidal air cells of ethmoid bone A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall. UBERON:0005913 UBERON:0001679 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200035 ethmoidal bulla of ethmoid bone A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus. UBERON:0005913 UBERON:0001679 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200036 external auditory meatus of squamous part of temporal bone A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200038 facet of eleventh rib A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs. UBERON:0005913 UBERON:0004610 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200039 facet of first rib A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above. UBERON:0005913 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200040 facet of tenth rib A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet. UBERON:0005913 UBERON:0004609 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200041 facet of twelfth rib A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet. UBERON:0005913 UBERON:0004611 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200042 fibular facet of tibia A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint. UBERON:0005913 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200043 fibular notch of tibia A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament. UBERON:0005744 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200044 fibular trochlea of calcaneus A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below. UBERON:4100000 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200045 foramen ovale of sphenoid bone A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve. UBERON:0005744 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200046 fossa for lacrimal sac of lacrimal bone A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus. UBERON:0004704 UBERON:0001680 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lacrimal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200047 frontal crest of frontal bone A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri. UBERON:4200133 UBERON:0000209 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200048 glabella of frontal bone A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane. UBERON:0005913 UBERON:0000209 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200050 gluteal surface of ilium of os coxa A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200051 gluteal tuberosity of femur A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle. UBERON:4100000 UBERON:0000981 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Femur http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200052 granula foveaolae of parietal bone A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses. UBERON:0005913 UBERON:0000210 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Parietal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200053 greater palatine canal of maxilla A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate. UBERON:0005744 UBERON:0002397 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Maxilla http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200054 greater wings of sphenoid bone A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum. UBERON:0005913 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200055 groove for fibularis longus tendon of cuboid A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal. UBERON:0006846 UBERON:0001455 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cuboid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200056 groove for middle meningeal a. of parietal bone A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater. UBERON:0006846 UBERON:0000210 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Parietal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200057 groove for nasopalatine nerve of vomer A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal. UBERON:0006846 UBERON:0002396 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Vomer http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200058 groove for posterior deep temporal artery of squamous part of temporal bone A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle. UBERON:0006846 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200060 groove for subclavian artery of first rib A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs. UBERON:0006846 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200061 groove for subclavian vein of first rib A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb. UBERON:0006846 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200062 groove for superior sagittal sinus of frontal bone A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum. UBERON:0006846 UBERON:0000209 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200063 groove for superior sagittal sinus of parietal bone A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance. UBERON:0006846 UBERON:0000210 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Parietal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200064 groove for tendon of flexor hallucis longus muscle of calcaneus A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum. UBERON:0006846 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200065 groove for transverse sinus of squamous part of occipital bone A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus. UBERON:0006846 UBERON:0001676 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200066 groove for vertebral artery of first cervical vertebra A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum. UBERON:0006846 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200067 head of radius of radius A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination. UBERON:0005913 UBERON:0001423 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200068 head of second distal phalanx of foot A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity. UBERON:0005913 UBERON:0004316 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200069 head of second distal phalanx of hand A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit. UBERON:0005913 UBERON:0004311 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200070 head of second middle phalanx of foot A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint. UBERON:0005913 UBERON:0004324 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200071 head of second middle phalanx of hand A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit. UBERON:0005913 UBERON:0004320 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200072 head of third middle phalanx of hand A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint. UBERON:0005913 UBERON:0004321 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200073 head of ulna of ulna A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint. UBERON:0005913 UBERON:0001424 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ulna http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200074 hiatus and groove of petrous part of temporal bone for greater petrosal nerve A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200075 hiatus and groove of petrous part of temporal bone for lesser petrosal nerve A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200076 hyoid region bone A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage. UBERON:0005913 UBERON:0001685 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hyoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200080 iliac tubercle of ilium of os coxa A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning. UBERON:4100000 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200081 iliac tuberosity of ilium of os coxa A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae. UBERON:4100000 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200082 iliopubic ramus of os coxa A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface. UBERON:4100000 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200084 inferior articular facet of eighth thoracic vertebra A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility. UBERON:0005913 UBERON:0011050 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200085 inferior articular facet of eleventh thoracic vertebra A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility. UBERON:0005913 UBERON:0004635 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200086 inferior articular facet of fifth cervical vertebra A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6. UBERON:0005913 UBERON:0004614 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200087 inferior articular facet of fifth thoracic vertebra A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation. UBERON:0005913 UBERON:0004630 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200088 inferior articular facet of first cervical vertebra A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint. UBERON:0005913 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200089 inferior articular facet of first thoracic vertebra A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2. UBERON:0005913 UBERON:0004626 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200090 inferior articular facet of fourth cervical vertebra A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5. UBERON:0005913 UBERON:0004613 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200091 inferior articular facet of fourth thoracic vertebra A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae. UBERON:0005913 UBERON:0004629 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200092 inferior articular facet of ninth thoracic vertebra A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern. UBERON:0005913 UBERON:0004633 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200093 inferior articular facet of second cervical vertebra A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra. UBERON:0005913 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200094 inferior articular facet of second thoracic vertebra A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region. UBERON:0005913 UBERON:0004627 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200095 inferior articular facet of seventh cervical vertebra A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition. UBERON:0005913 UBERON:0004616 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200096 inferior articular facet of seventh thoracic vertebra A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates. UBERON:0005913 UBERON:0004632 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200097 inferior articular facet of sixth cervical vertebra A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7. UBERON:0005913 UBERON:0004615 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200098 inferior articular facet of sixth thoracic vertebra A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine. UBERON:0005913 UBERON:0004631 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200099 inferior articular facet of tenth thoracic vertebra A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern. UBERON:0005913 UBERON:0004634 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200100 inferior articular facet of third cervical vertebra A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4. UBERON:0005913 UBERON:0004612 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200101 inferior articular facet of third thoracic vertebra A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine. UBERON:0005913 UBERON:0004628 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200102 inferior articular facet of twelfth thoracic vertebra A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction. UBERON:0005913 UBERON:0004636 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200103 inferior articular process of first cervical vertebra A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae. UBERON:0006061 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200104 inferior articular process of second cervical vertebra A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra. UBERON:0006061 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200105 inferior costal facet of eleventh thoracic vertebra A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11. UBERON:0005913 UBERON:0004635 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200106 inferior costal facet of tenth thoracic vertebra A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11. UBERON:0005913 UBERON:0004634 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200107 inferior mental spine of mandible A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles. UBERON:4100000 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200108 inferior nuchal line of squamous part of occipital bone A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles. UBERON:0005913 UBERON:0001676 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200109 inferior vertebral notch of first cervical vertebra A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes. UBERON:0005744 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200110 infraglenoid tubercle of scapula A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle. UBERON:4100000 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200112 infraspinous fossa of scapula A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle. UBERON:0004704 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200113 intercondylar notch of femur A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface. UBERON:0005744 UBERON:0000981 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Femur http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200114 intermediate sacral crest of sacrum A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae. UBERON:4200133 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200115 internal auditory meatus of petrous part of temporal bone A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200116 internal occipital protuberance of squamous part of occipital bone A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet. UBERON:4100000 UBERON:0001676 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200117 interosseus border of tibia A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg. UBERON:0005913 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200118 ischial body of ischium of os coxa A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200120 lacrimal fossa of frontal bone A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland. UBERON:0004704 UBERON:0000209 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200121 lamina of first cervical vertebra A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process. UBERON:0004662 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200122 lamina of second cervical vertebra A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle. UBERON:0004662 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200123 lateral process of tuberosity of calcaneus A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis. UBERON:4100000 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200125 lateral sacral crest of sacrum A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments. UBERON:4200133 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200126 lesser wings of sphenoid bone A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal. UBERON:0005913 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200127 linea terminalis of sacrum A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae. UBERON:0005913 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200128 lunate surface of os coxa A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200129 mammillary process of fifth lumbar vertebra A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala. UBERON:0006061 UBERON:0004621 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200130 mammillary process of first lumbar vertebra A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction. UBERON:0006061 UBERON:0004617 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200131 mammillary process of fourth lumbar vertebra A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine. UBERON:0006061 UBERON:0004620 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200132 mammillary process of second lumbar vertebra A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5. UBERON:0006061 UBERON:0004618 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200133 mammillary process of third lumbar vertebra A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures. UBERON:0006061 UBERON:0004619 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200134 mandibular angle of mandible A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface. UBERON:0005913 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200135 mandibular foramen of mandible A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal. UBERON:0005744 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200136 mandibular fossa of squamous part of temporal bone A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint. UBERON:0004704 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200137 mandibular notch of mandible A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle. UBERON:0005744 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200138 mastoid foramen of mastoid part of temporal bone A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200139 mastoid notch of mastoid part of temporal bone A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200140 medial malleolus of tibia A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively. UBERON:4100000 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200141 medial process of tuberosity of calcaneus A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament. UBERON:4100000 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200142 medial pterygoid plate of sphenoid bone A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe. UBERON:0005913 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200143 median sacral crest of sacrum A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles. UBERON:4200133 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200144 mental protuberance of mandible A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens. UBERON:4100000 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200145 mylohyoid groove of mandible A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel. UBERON:0006846 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200146 mylohyoid line of mandible A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe. UBERON:0005913 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200147 nasolacrimal canal of maxilla A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity. UBERON:0005744 UBERON:0002397 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Maxilla http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200148 neck of radius of radius A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament. UBERON:0005913 UBERON:0001423 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200149 non-articular facet of tubercle of eighth rib A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases. UBERON:4100000 UBERON:0010757 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200150 non-articular facet of tubercle of fifth rib A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly. UBERON:4100000 UBERON:0004605 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200151 non-articular facet of tubercle of first rib A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra. UBERON:4100000 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200152 non-articular facet of tubercle of fourth rib A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra. UBERON:4100000 UBERON:0004604 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200153 non-articular facet of tubercle of ninth rib A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation. UBERON:4100000 UBERON:0004608 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200154 non-articular facet of tubercle of second rib A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra. UBERON:4100000 UBERON:0004602 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200155 non-articular facet of tubercle of seventh rib A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally. UBERON:4100000 UBERON:0004607 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200156 non-articular facet of tubercle of sixth rib A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally. UBERON:4100000 UBERON:0004606 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200157 non-articular facet of tubercle of tenth rib A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally. UBERON:4100000 UBERON:0004609 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200158 non-articular facet of tubercle of third rib A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra. UBERON:4100000 UBERON:0004603 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200160 obturator groove of pubis of os coxa A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh. UBERON:0006846 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200164 olfactory foramina of ethmoid bone A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa. UBERON:0005744 UBERON:0001679 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200166 pecten pubis of pubis of os coxa A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200167 pectinal line of femur A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle. UBERON:0005913 UBERON:0000981 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Femur http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200168 pedicle of first cervical vertebra A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina. UBERON:0001078 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200169 pedicle of second cervical vertebra A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen. UBERON:0001078 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200170 perpendicular plate of ethmoid bone A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum. UBERON:0005913 UBERON:0001679 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200171 petrotympanic fissure of squamous part of temporal bone A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200172 posterior arch of first cervical vertebra An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface. UBERON:0005814 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200173 posterior clinoid process of sphenoid bone A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex. UBERON:4100000 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200174 posterior gluteal line of ilium of os coxa A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200175 posterior sacral foramina of sacrum A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back. UBERON:0005744 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200177 postglenoid tubercle of squamous part of temporal bone A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate. UBERON:4100000 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200179 pterygoid fossa of sphenoid bone A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle. UBERON:0004704 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200180 pterygoid fovea of mandible A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle. UBERON:0005913 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200181 pterygoid hamulus of sphenoid bone A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate. UBERON:4100000 UBERON:0001677 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200182 pubic body of pubis of os coxa A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle. UBERON:0005913 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200183 pubic crest of pubis of os coxa A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles. UBERON:4200133 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200185 pubic tubercle of pubis of os coxa A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring. UBERON:4100000 UBERON:0001272 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200186 radial fossa of humerus A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint. UBERON:0004704 UBERON:0000976 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Humerus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200187 radial groove of humerus A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove. UBERON:0006846 UBERON:0000976 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Humerus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200188 radial tuberosity of radius A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon. UBERON:4100000 UBERON:0001423 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200189 sacral apex of sacrum A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis. UBERON:0005913 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200190 sacral canal of sacrum A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus. UBERON:0005744 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200191 sacral cornu of sacrum A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia. UBERON:4100000 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200192 sacral hiatus of sacrum A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections. UBERON:0005744 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200193 sacral promontory of sacrum A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis. UBERON:0005913 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200194 sacral spine of sacrum A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles. UBERON:4100000 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200195 sacral tuberosity of sacrum A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium. UBERON:4100000 UBERON:0003690 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200196 scalene tubercle of first rib A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib. UBERON:4100000 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200197 scaphoid tubercle of scaphoid A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle. UBERON:4100000 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200198 scapular notch of scapula A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa. UBERON:0005744 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200199 scapular spine of scapula A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles. UBERON:4100000 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200201 shaft of first distal phalanx of hand A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp. UBERON:0005913 UBERON:0004337 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200202 shaft of first proximal phalanx of hand A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb. UBERON:0005913 UBERON:0004338 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200203 shaft of radius of radius A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane. UBERON:0005913 UBERON:0001423 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200204 shaft of ulna of ulna A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane. UBERON:0005913 UBERON:0001424 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ulna http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200205 soleal line of tibia A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg. UBERON:0005913 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200206 spinous process of first cervical vertebra A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle. UBERON:0001076 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200207 spinous process of second cervical vertebra A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles. UBERON:0001076 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200208 sternal angle of sternum A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum. UBERON:0005913 UBERON:0000975 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200209 sternal end of eighth rib A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib. UBERON:0005913 UBERON:0010757 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200210 sternal end of eleventh rib A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature. UBERON:0005913 UBERON:0004610 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200211 sternal end of fifth rib A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib. UBERON:0005913 UBERON:0004605 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200212 sternal end of first rib A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib. UBERON:0005913 UBERON:0004601 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200213 sternal end of fourth rib A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle. UBERON:0005913 UBERON:0004604 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200214 sternal end of ninth rib A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib. UBERON:0005913 UBERON:0004608 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200215 sternal end of second rib A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum. UBERON:0005913 UBERON:0004602 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200216 sternal end of seventh rib A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction. UBERON:0005913 UBERON:0004607 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200217 sternal end of sixth rib A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum. UBERON:0005913 UBERON:0004606 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200218 sternal end of tenth rib A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin. UBERON:0005913 UBERON:0004609 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200219 sternal end of third rib A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches. UBERON:0005913 UBERON:0004603 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200220 sternal end of twelfth rib A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney. UBERON:0005913 UBERON:0004611 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200221 sternal region bone A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles. UBERON:0005913 UBERON:0000975 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200222 stylomastoid foramen of petrous part of temporal bone A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region. UBERON:0005744 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200223 sublingual fossa of mandible A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged. UBERON:0004704 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200224 submandibular fossa of mandible A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated. UBERON:0004704 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200225 supercilary arch of frontal bone A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males. UBERON:0005913 UBERON:0000209 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200226 superior articular facet of eighth thoracic vertebra A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine. UBERON:0005913 UBERON:0011050 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200227 superior articular facet of eleventh thoracic vertebra A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern. UBERON:0005913 UBERON:0004635 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200228 superior articular facet of fifth cervical vertebra A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint. UBERON:0005913 UBERON:0004614 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200229 superior articular facet of fifth lumbar vertebra A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease. UBERON:0005913 UBERON:0004621 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200230 superior articular facet of fifth thoracic vertebra A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine. UBERON:0005913 UBERON:0004630 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200231 superior articular facet of first cervical vertebra A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint. UBERON:0005913 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200232 superior articular facet of first lumbar vertebra A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column. UBERON:0005913 UBERON:0004617 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200233 superior articular facet of first thoracic vertebra A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern. UBERON:0005913 UBERON:0004626 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200234 superior articular facet of fourth cervical vertebra A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint. UBERON:0005913 UBERON:0004613 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200235 superior articular facet of fourth lumbar vertebra A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine. UBERON:0005913 UBERON:0004620 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200236 superior articular facet of fourth thoracic vertebra A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine. UBERON:0005913 UBERON:0004629 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200237 superior articular facet of ninth thoracic vertebra A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained. UBERON:0005913 UBERON:0004633 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200238 superior articular facet of second cervical vertebra A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint. UBERON:0005913 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200239 superior articular facet of second lumbar vertebra A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine. UBERON:0005913 UBERON:0004618 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200240 superior articular facet of second thoracic vertebra A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine. UBERON:0005913 UBERON:0004627 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200241 superior articular facet of seventh cervical vertebra A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets. UBERON:0005913 UBERON:0004616 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200242 superior articular facet of seventh thoracic vertebra A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation. UBERON:0005913 UBERON:0004632 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200243 superior articular facet of sixth cervical vertebra A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint. UBERON:0005913 UBERON:0004615 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200244 superior articular facet of sixth thoracic vertebra A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex. UBERON:0005913 UBERON:0004631 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200245 superior articular facet of tenth thoracic vertebra A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift. UBERON:0005913 UBERON:0004634 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200246 superior articular facet of third cervical vertebra A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint. UBERON:0005913 UBERON:0004612 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200247 superior articular facet of third lumbar vertebra A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region. UBERON:0005913 UBERON:0004619 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200248 superior articular facet of third thoracic vertebra A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column. UBERON:0005913 UBERON:0004628 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200249 superior articular facet of twelfth thoracic vertebra A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern. UBERON:0005913 UBERON:0004636 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200250 superior articular process of first cervical vertebra A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head. UBERON:0006061 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200251 superior articular process of second cervical vertebra A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints. UBERON:0006061 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200252 superior costal facet of eleventh thoracic vertebra A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra. UBERON:0005913 UBERON:0004635 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200253 superior mental spine of mandible A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles. UBERON:4100000 UBERON:0001684 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200254 superior nuchal line of squamous part of occipital bone A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles. UBERON:0005913 UBERON:0001676 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200255 superior vertebral notch of first cervical vertebra A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve. UBERON:0005744 UBERON:0001092 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200256 superior vertebral notch of second cervical vertebra A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve. UBERON:0005744 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200257 supinator fossa of ulna A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle. UBERON:0004704 UBERON:0001424 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ulna http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200259 supramastoid crest of squamous part of temporal bone A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle. UBERON:4200133 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200260 supraorbital notch or foramen of frontal bone A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp. UBERON:0005744 UBERON:0000209 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200261 supraspinous fossa of scapula A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus. UBERON:0004704 UBERON:0006849 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200262 sustentaculum tali of calcaneus A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments. UBERON:0005913 UBERON:0001450 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200264 tibial plateau of tibia A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence. UBERON:0005913 UBERON:0000979 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200265 transverse costal facet of eighth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae. UBERON:0005913 UBERON:0011050 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200266 transverse costal facet of eleventh thoracic vertebra A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable. UBERON:0005913 UBERON:0004635 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200267 transverse costal facet of fifth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5. UBERON:0005913 UBERON:0004630 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200268 transverse costal facet of first thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib. UBERON:0005913 UBERON:0004626 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200269 transverse costal facet of fourth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column. UBERON:0005913 UBERON:0004629 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200270 transverse costal facet of ninth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent. UBERON:0005913 UBERON:0004633 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200271 transverse costal facet of second thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column. UBERON:0005913 UBERON:0004627 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200272 transverse costal facet of seventh thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae. UBERON:0005913 UBERON:0004632 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200273 transverse costal facet of sixth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability. UBERON:0005913 UBERON:0004631 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200274 transverse costal facet of tenth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib. UBERON:0005913 UBERON:0004634 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200275 transverse costal facet of third thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration. UBERON:0005913 UBERON:0004628 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200278 transverse ridges of sternum A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum. UBERON:0005913 UBERON:0000975 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200279 trigeminal impression of petrous part of temporal bone A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater. UBERON:0005913 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200281 tuberosity of fifth distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger. UBERON:4100000 UBERON:0004314 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200282 tuberosity of first distal phalanx of hand A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate. UBERON:4100000 UBERON:0004337 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200283 tuberosity of fourth distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail. UBERON:4100000 UBERON:0004313 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200284 tuberosity of second distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate. UBERON:4100000 UBERON:0004311 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200285 tuberosity of third distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed. UBERON:4100000 UBERON:0004312 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200286 tympanic caniliculus of petrous part of temporal bone A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus. UBERON:0005913 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200287 vertebra prominens of seventh cervical vertebra A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark. UBERON:0005913 UBERON:0004616 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200288 vertebral arch of eighth thoracic vertebra A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly. UBERON:0003861 UBERON:0011050 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200289 vertebral arch of eleventh thoracic vertebra A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels. UBERON:0003861 UBERON:0004635 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200290 vertebral arch of fifth cervical vertebra A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally. UBERON:0003861 UBERON:0004614 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200291 vertebral arch of fifth lumbar vertebra A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests. UBERON:0003861 UBERON:0004621 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200292 vertebral arch of fifth thoracic vertebra A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5. UBERON:0003861 UBERON:0004630 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200293 vertebral arch of first lumbar vertebra A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction. UBERON:0003861 UBERON:0004617 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200294 vertebral arch of first thoracic vertebra A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments. UBERON:0003861 UBERON:0004626 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200295 vertebral arch of fourth cervical vertebra A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally. UBERON:0003861 UBERON:0004613 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200296 vertebral arch of fourth lumbar vertebra A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament. UBERON:0003861 UBERON:0004620 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200297 vertebral arch of fourth thoracic vertebra A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below. UBERON:0003861 UBERON:0004629 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200298 vertebral arch of ninth thoracic vertebra A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series. UBERON:0003861 UBERON:0004633 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200299 vertebral arch of second cervical vertebra A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas. UBERON:0003861 UBERON:0001093 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200300 vertebral arch of second lumbar vertebra A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae. UBERON:0003861 UBERON:0004618 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200301 vertebral arch of second thoracic vertebra A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature. UBERON:0003861 UBERON:0004627 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200302 vertebral arch of seventh cervical vertebra A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine. UBERON:0003861 UBERON:0004616 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200303 vertebral arch of seventh thoracic vertebra A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7. UBERON:0003861 UBERON:0004632 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200304 vertebral arch of sixth cervical vertebra A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles. UBERON:0003861 UBERON:0004615 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200305 vertebral arch of sixth thoracic vertebra A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib. UBERON:0003861 UBERON:0004631 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200306 vertebral arch of tenth thoracic vertebra A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology. UBERON:0003861 UBERON:0004634 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200307 vertebral arch of third cervical vertebra A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally. UBERON:0003861 UBERON:0004612 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200308 vertebral arch of third lumbar vertebra A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles. UBERON:0003861 UBERON:0004619 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200309 vertebral arch of third thoracic vertebra A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region. UBERON:0003861 UBERON:0004628 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200310 vertebral arch of twelfth thoracic vertebra A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation. UBERON:0003861 UBERON:0004636 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200338 zygomatic process of squamous part of temporal bone A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface. UBERON:4100000 UBERON:0001678 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 -http://purl.obolibrary.org/obo/UBERON_1200339 zygomaticofacial foramen of zygomatic bone A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek. UBERON:0005744 UBERON:0001683 https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Zygomatic_bone http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +ID LABEL Definition def_xref is_a part_of In_subset Date Contributor Present_in_taxon +ID LABEL A IAO:0000115 >A oboInOwl:hasDbXref SPLIT=| SC % SC BFO:0000050 some % AI oboInOwl:inSubset AT dcterms:date^^xsd:dateTime AI dcterms:contributor AI RO:0002175 +http://purl.obolibrary.org/obo/UBERON_1200005 acromial process of scapula A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:4100000 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200006 alae of sacrum A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4100000 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200007 alveolar border of mandible A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0005913 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200008 anterior arch of first cervical vertebra An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0005814 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200009 anterior clinoid process of sphenoid bone A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:4100000 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200010 anterior gluteal line of ilium of os coxa A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200011 anterior sacral foramina of sacrum A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005744 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200012 anterior tubercle of first cervical vertebra A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:4100000 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200013 anterolateral tubercle of tibia A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:4100000 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200014 arcuate line of ilium of os coxa A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200015 articular surface for cuboid bone of calcaneus A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:0005913 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200016 articular tubercle of squamous part of temporal bone A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:4100000 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200017 auricular surface of ilium of os coxa A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200018 base of first distal phalanx of foot A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004315 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200019 base of first distal phalanx of hand A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004337 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200020 base of first proximal phalanx of foot A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004332 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200021 base of first proximal phalanx of hand A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004338 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200022 body of calcaneus A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:0005913 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200023 body of second cervical vertebra A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0001075 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200024 body of sphenoid bone A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0005913 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200025 calcaneal sulcus of calcaneus A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:0006846 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200026 coccygeal cornu of coccyx A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Coccyx UBERON:4100000 UBERON:0001350 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200027 coronoid fossa of humerus A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Humerus UBERON:0004704 UBERON:0000976 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200028 costal groove of first rib A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0006846 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200029 costal groove of twelfth rib A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0006846 UBERON:0004611 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200030 costal notches of sternum A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum UBERON:0005913 UBERON:0000975 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200031 crista galla of ethmoid bone A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone UBERON:4200133 UBERON:0001679 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200032 digastric fossa of mandible A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0004704 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200033 dorsum sellae of sphenoid bone A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0005913 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200034 ethmoidal air cells of ethmoid bone A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone UBERON:0005913 UBERON:0001679 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200035 ethmoidal bulla of ethmoid bone A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone UBERON:0005913 UBERON:0001679 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200036 external auditory meatus of squamous part of temporal bone A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200038 facet of eleventh rib A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004610 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200039 facet of first rib A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200040 facet of tenth rib A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004609 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200041 facet of twelfth rib A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004611 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200042 fibular facet of tibia A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:0005913 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200043 fibular notch of tibia A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:0005744 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200044 fibular trochlea of calcaneus A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:4100000 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200045 foramen ovale of sphenoid bone A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0005744 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200046 fossa for lacrimal sac of lacrimal bone A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lacrimal_bone UBERON:0004704 UBERON:0001680 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200047 frontal crest of frontal bone A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone UBERON:4200133 UBERON:0000209 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200048 glabella of frontal bone A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone UBERON:0005913 UBERON:0000209 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200050 gluteal surface of ilium of os coxa A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200051 gluteal tuberosity of femur A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Femur UBERON:4100000 UBERON:0000981 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200052 granula foveaolae of parietal bone A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Parietal_bone UBERON:0005913 UBERON:0000210 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200053 greater palatine canal of maxilla A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Maxilla UBERON:0005744 UBERON:0002397 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200054 greater wings of sphenoid bone A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0005913 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200055 groove for fibularis longus tendon of cuboid A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cuboid_bone UBERON:0006846 UBERON:0001455 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200056 groove for middle meningeal a. of parietal bone A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Parietal_bone UBERON:0006846 UBERON:0000210 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200057 groove for nasopalatine nerve of vomer A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Vomer UBERON:0006846 UBERON:0002396 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200058 groove for posterior deep temporal artery of squamous part of temporal bone A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0006846 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200060 groove for subclavian artery of first rib A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0006846 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200061 groove for subclavian vein of first rib A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0006846 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200062 groove for superior sagittal sinus of frontal bone A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone UBERON:0006846 UBERON:0000209 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200063 groove for superior sagittal sinus of parietal bone A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Parietal_bone UBERON:0006846 UBERON:0000210 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200064 groove for tendon of flexor hallucis longus muscle of calcaneus A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:0006846 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200065 groove for transverse sinus of squamous part of occipital bone A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone UBERON:0006846 UBERON:0001676 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200066 groove for vertebral artery of first cervical vertebra A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0006846 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200067 head of radius of radius A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) UBERON:0005913 UBERON:0001423 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200068 head of second distal phalanx of foot A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004316 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200069 head of second distal phalanx of hand A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004311 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200070 head of second middle phalanx of foot A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004324 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200071 head of second middle phalanx of hand A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004320 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200072 head of third middle phalanx of hand A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004321 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200073 head of ulna of ulna A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ulna UBERON:0005913 UBERON:0001424 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200074 hiatus and groove of petrous part of temporal bone for greater petrosal nerve A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200075 hiatus and groove of petrous part of temporal bone for lesser petrosal nerve A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200076 hyoid region bone A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hyoid_bone UBERON:0005913 UBERON:0001685 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200080 iliac tubercle of ilium of os coxa A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:4100000 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200081 iliac tuberosity of ilium of os coxa A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:4100000 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200082 iliopubic ramus of os coxa A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:4100000 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200084 inferior articular facet of eighth thoracic vertebra A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0011050 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200085 inferior articular facet of eleventh thoracic vertebra A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004635 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200086 inferior articular facet of fifth cervical vertebra A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004614 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200087 inferior articular facet of fifth thoracic vertebra A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004630 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200088 inferior articular facet of first cervical vertebra A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0005913 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200089 inferior articular facet of first thoracic vertebra A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004626 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200090 inferior articular facet of fourth cervical vertebra A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004613 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200091 inferior articular facet of fourth thoracic vertebra A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004629 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200092 inferior articular facet of ninth thoracic vertebra A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004633 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200093 inferior articular facet of second cervical vertebra A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0005913 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200094 inferior articular facet of second thoracic vertebra A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004627 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200095 inferior articular facet of seventh cervical vertebra A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004616 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200096 inferior articular facet of seventh thoracic vertebra A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004632 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200097 inferior articular facet of sixth cervical vertebra A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004615 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200098 inferior articular facet of sixth thoracic vertebra A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004631 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200099 inferior articular facet of tenth thoracic vertebra A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004634 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200100 inferior articular facet of third cervical vertebra A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004612 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200101 inferior articular facet of third thoracic vertebra A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004628 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200102 inferior articular facet of twelfth thoracic vertebra A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004636 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200103 inferior articular process of first cervical vertebra A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0006061 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200104 inferior articular process of second cervical vertebra A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0006061 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200105 inferior costal facet of eleventh thoracic vertebra A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004635 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200106 inferior costal facet of tenth thoracic vertebra A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004634 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200107 inferior mental spine of mandible A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:4100000 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200108 inferior nuchal line of squamous part of occipital bone A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone UBERON:0005913 UBERON:0001676 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200109 inferior vertebral notch of first cervical vertebra A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0005744 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200110 infraglenoid tubercle of scapula A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:4100000 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200112 infraspinous fossa of scapula A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:0004704 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200113 intercondylar notch of femur A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Femur UBERON:0005744 UBERON:0000981 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200114 intermediate sacral crest of sacrum A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4200133 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200115 internal auditory meatus of petrous part of temporal bone A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200116 internal occipital protuberance of squamous part of occipital bone A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone UBERON:4100000 UBERON:0001676 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200117 interosseus border of tibia A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:0005913 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200118 ischial body of ischium of os coxa A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200120 lacrimal fossa of frontal bone A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone UBERON:0004704 UBERON:0000209 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200121 lamina of first cervical vertebra A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0004662 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200122 lamina of second cervical vertebra A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0004662 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200123 lateral process of tuberosity of calcaneus A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:4100000 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200125 lateral sacral crest of sacrum A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4200133 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200126 lesser wings of sphenoid bone A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0005913 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200127 linea terminalis of sacrum A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005913 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200128 lunate surface of os coxa A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200129 mammillary process of fifth lumbar vertebra A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0006061 UBERON:0004621 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200130 mammillary process of first lumbar vertebra A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0006061 UBERON:0004617 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200131 mammillary process of fourth lumbar vertebra A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0006061 UBERON:0004620 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200132 mammillary process of second lumbar vertebra A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0006061 UBERON:0004618 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200133 mammillary process of third lumbar vertebra A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0006061 UBERON:0004619 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200134 mandibular angle of mandible A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0005913 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200135 mandibular foramen of mandible A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0005744 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200136 mandibular fossa of squamous part of temporal bone A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0004704 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200137 mandibular notch of mandible A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0005744 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200138 mastoid foramen of mastoid part of temporal bone A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200139 mastoid notch of mastoid part of temporal bone A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200140 medial malleolus of tibia A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:4100000 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200141 medial process of tuberosity of calcaneus A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:4100000 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200142 medial pterygoid plate of sphenoid bone A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0005913 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200143 median sacral crest of sacrum A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4200133 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200144 mental protuberance of mandible A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:4100000 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200145 mylohyoid groove of mandible A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0006846 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200146 mylohyoid line of mandible A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0005913 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200147 nasolacrimal canal of maxilla A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Maxilla UBERON:0005744 UBERON:0002397 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200148 neck of radius of radius A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) UBERON:0005913 UBERON:0001423 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200149 non-articular facet of tubercle of eighth rib A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0010757 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200150 non-articular facet of tubercle of fifth rib A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004605 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200151 non-articular facet of tubercle of first rib A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200152 non-articular facet of tubercle of fourth rib A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004604 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200153 non-articular facet of tubercle of ninth rib A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004608 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200154 non-articular facet of tubercle of second rib A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004602 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200155 non-articular facet of tubercle of seventh rib A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004607 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200156 non-articular facet of tubercle of sixth rib A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004606 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200157 non-articular facet of tubercle of tenth rib A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004609 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200158 non-articular facet of tubercle of third rib A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004603 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200160 obturator groove of pubis of os coxa A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0006846 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200164 olfactory foramina of ethmoid bone A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone UBERON:0005744 UBERON:0001679 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200166 pecten pubis of pubis of os coxa A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200167 pectinal line of femur A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Femur UBERON:0005913 UBERON:0000981 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200168 pedicle of first cervical vertebra A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0001078 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200169 pedicle of second cervical vertebra A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0001078 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200170 perpendicular plate of ethmoid bone A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ethmoid_bone UBERON:0005913 UBERON:0001679 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200171 petrotympanic fissure of squamous part of temporal bone A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200172 posterior arch of first cervical vertebra An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0005814 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200173 posterior clinoid process of sphenoid bone A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:4100000 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200174 posterior gluteal line of ilium of os coxa A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200175 posterior sacral foramina of sacrum A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005744 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200177 postglenoid tubercle of squamous part of temporal bone A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:4100000 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200179 pterygoid fossa of sphenoid bone A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:0004704 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200180 pterygoid fovea of mandible A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0005913 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200181 pterygoid hamulus of sphenoid bone A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sphenoid_bone UBERON:4100000 UBERON:0001677 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200182 pubic body of pubis of os coxa A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:0005913 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200183 pubic crest of pubis of os coxa A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:4200133 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200185 pubic tubercle of pubis of os coxa A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Hip_bone UBERON:4100000 UBERON:0001272 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200186 radial fossa of humerus A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Humerus UBERON:0004704 UBERON:0000976 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200187 radial groove of humerus A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Humerus UBERON:0006846 UBERON:0000976 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200188 radial tuberosity of radius A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) UBERON:4100000 UBERON:0001423 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200189 sacral apex of sacrum A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005913 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200190 sacral canal of sacrum A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005744 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200191 sacral cornu of sacrum A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4100000 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200192 sacral hiatus of sacrum A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005744 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200193 sacral promontory of sacrum A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:0005913 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200194 sacral spine of sacrum A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4100000 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200195 sacral tuberosity of sacrum A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sacrum UBERON:4100000 UBERON:0003690 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200196 scalene tubercle of first rib A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:4100000 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200197 scaphoid tubercle of scaphoid A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:4100000 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200198 scapular notch of scapula A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:0005744 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200199 scapular spine of scapula A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:4100000 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200201 shaft of first distal phalanx of hand A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004337 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200202 shaft of first proximal phalanx of hand A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:0005913 UBERON:0004338 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200203 shaft of radius of radius A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Radius_(bone) UBERON:0005913 UBERON:0001423 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200204 shaft of ulna of ulna A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ulna UBERON:0005913 UBERON:0001424 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200205 soleal line of tibia A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:0005913 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200206 spinous process of first cervical vertebra A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0001076 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200207 spinous process of second cervical vertebra A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0001076 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200208 sternal angle of sternum A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum UBERON:0005913 UBERON:0000975 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200209 sternal end of eighth rib A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0010757 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200210 sternal end of eleventh rib A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004610 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200211 sternal end of fifth rib A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004605 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200212 sternal end of first rib A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004601 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200213 sternal end of fourth rib A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004604 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200214 sternal end of ninth rib A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004608 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200215 sternal end of second rib A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004602 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200216 sternal end of seventh rib A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004607 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200217 sternal end of sixth rib A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004606 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200218 sternal end of tenth rib A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004609 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200219 sternal end of third rib A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004603 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200220 sternal end of twelfth rib A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Rib UBERON:0005913 UBERON:0004611 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200221 sternal region bone A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum UBERON:0005913 UBERON:0000975 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200222 stylomastoid foramen of petrous part of temporal bone A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005744 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200223 sublingual fossa of mandible A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0004704 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200224 submandibular fossa of mandible A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:0004704 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200225 supercilary arch of frontal bone A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone UBERON:0005913 UBERON:0000209 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200226 superior articular facet of eighth thoracic vertebra A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0011050 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200227 superior articular facet of eleventh thoracic vertebra A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004635 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200228 superior articular facet of fifth cervical vertebra A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004614 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200229 superior articular facet of fifth lumbar vertebra A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0005913 UBERON:0004621 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200230 superior articular facet of fifth thoracic vertebra A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004630 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200231 superior articular facet of first cervical vertebra A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0005913 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200232 superior articular facet of first lumbar vertebra A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0005913 UBERON:0004617 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200233 superior articular facet of first thoracic vertebra A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004626 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200234 superior articular facet of fourth cervical vertebra A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004613 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200235 superior articular facet of fourth lumbar vertebra A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0005913 UBERON:0004620 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200236 superior articular facet of fourth thoracic vertebra A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004629 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200237 superior articular facet of ninth thoracic vertebra A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004633 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200238 superior articular facet of second cervical vertebra A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0005913 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200239 superior articular facet of second lumbar vertebra A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0005913 UBERON:0004618 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200240 superior articular facet of second thoracic vertebra A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004627 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200241 superior articular facet of seventh cervical vertebra A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004616 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200242 superior articular facet of seventh thoracic vertebra A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004632 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200243 superior articular facet of sixth cervical vertebra A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004615 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200244 superior articular facet of sixth thoracic vertebra A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004631 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200245 superior articular facet of tenth thoracic vertebra A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004634 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200246 superior articular facet of third cervical vertebra A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004612 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200247 superior articular facet of third lumbar vertebra A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0005913 UBERON:0004619 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200248 superior articular facet of third thoracic vertebra A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004628 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200249 superior articular facet of twelfth thoracic vertebra A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004636 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200250 superior articular process of first cervical vertebra A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0006061 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200251 superior articular process of second cervical vertebra A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0006061 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200252 superior costal facet of eleventh thoracic vertebra A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004635 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200253 superior mental spine of mandible A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Mandible UBERON:4100000 UBERON:0001684 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200254 superior nuchal line of squamous part of occipital bone A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Occipital_bone UBERON:0005913 UBERON:0001676 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200255 superior vertebral notch of first cervical vertebra A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Atlas_(anatomy) UBERON:0005744 UBERON:0001092 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200256 superior vertebral notch of second cervical vertebra A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0005744 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200257 supinator fossa of ulna A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Ulna UBERON:0004704 UBERON:0001424 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200259 supramastoid crest of squamous part of temporal bone A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:4200133 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200260 supraorbital notch or foramen of frontal bone A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Frontal_bone UBERON:0005744 UBERON:0000209 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200261 supraspinous fossa of scapula A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Scapula UBERON:0004704 UBERON:0006849 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200262 sustentaculum tali of calcaneus A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Calcaneus UBERON:0005913 UBERON:0001450 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200264 tibial plateau of tibia A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Tibia UBERON:0005913 UBERON:0000979 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200265 transverse costal facet of eighth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0011050 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200266 transverse costal facet of eleventh thoracic vertebra A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004635 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200267 transverse costal facet of fifth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004630 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200268 transverse costal facet of first thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004626 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200269 transverse costal facet of fourth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004629 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200270 transverse costal facet of ninth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004633 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200271 transverse costal facet of second thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004627 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200272 transverse costal facet of seventh thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004632 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200273 transverse costal facet of sixth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004631 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200274 transverse costal facet of tenth thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004634 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200275 transverse costal facet of third thoracic vertebra A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0005913 UBERON:0004628 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200278 transverse ridges of sternum A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Sternum UBERON:0005913 UBERON:0000975 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200279 trigeminal impression of petrous part of temporal bone A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005913 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200281 tuberosity of fifth distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:4100000 UBERON:0004314 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200282 tuberosity of first distal phalanx of hand A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:4100000 UBERON:0004337 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200283 tuberosity of fourth distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:4100000 UBERON:0004313 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200284 tuberosity of second distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:4100000 UBERON:0004311 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200285 tuberosity of third distal phalanx of hand A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Phalanx_bone UBERON:4100000 UBERON:0004312 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200286 tympanic caniliculus of petrous part of temporal bone A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:0005913 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200287 vertebra prominens of seventh cervical vertebra A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0005913 UBERON:0004616 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200288 vertebral arch of eighth thoracic vertebra A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0011050 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200289 vertebral arch of eleventh thoracic vertebra A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004635 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200290 vertebral arch of fifth cervical vertebra A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0003861 UBERON:0004614 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200291 vertebral arch of fifth lumbar vertebra A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0003861 UBERON:0004621 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200292 vertebral arch of fifth thoracic vertebra A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004630 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200293 vertebral arch of first lumbar vertebra A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0003861 UBERON:0004617 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200294 vertebral arch of first thoracic vertebra A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004626 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200295 vertebral arch of fourth cervical vertebra A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0003861 UBERON:0004613 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200296 vertebral arch of fourth lumbar vertebra A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0003861 UBERON:0004620 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200297 vertebral arch of fourth thoracic vertebra A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004629 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200298 vertebral arch of ninth thoracic vertebra A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004633 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200299 vertebral arch of second cervical vertebra A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Axis_(anatomy) UBERON:0003861 UBERON:0001093 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200300 vertebral arch of second lumbar vertebra A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0003861 UBERON:0004618 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200301 vertebral arch of second thoracic vertebra A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004627 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200302 vertebral arch of seventh cervical vertebra A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0003861 UBERON:0004616 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200303 vertebral arch of seventh thoracic vertebra A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004632 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200304 vertebral arch of sixth cervical vertebra A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0003861 UBERON:0004615 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200305 vertebral arch of sixth thoracic vertebra A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004631 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200306 vertebral arch of tenth thoracic vertebra A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004634 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200307 vertebral arch of third cervical vertebra A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Cervical_vertebrae UBERON:0003861 UBERON:0004612 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200308 vertebral arch of third lumbar vertebra A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Lumbar_vertebrae UBERON:0003861 UBERON:0004619 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200309 vertebral arch of third thoracic vertebra A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004628 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200310 vertebral arch of twelfth thoracic vertebra A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Thoracic_vertebrae UBERON:0003861 UBERON:0004636 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200338 zygomatic process of squamous part of temporal bone A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Temporal_bone UBERON:4100000 UBERON:0001678 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 +http://purl.obolibrary.org/obo/UBERON_1200339 zygomaticofacial foramen of zygomatic bone A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek. https://fipat.library.dal.ca/ta2/|ISBN:9780323393225|Wikipedia:Zygomatic_bone UBERON:0005744 UBERON:0001683 http://purl.obolibrary.org/obo/uberon/core#added_by_HRA 2026-03-19T00:00:00Z https://orcid.org/0000-0002-7073-9172 http://purl.obolibrary.org/obo/NCBITaxon_9606 From be907253c14e6681e8d856181685ec0ad72e68f8 Mon Sep 17 00:00:00 2001 From: Ugur Bayindir Date: Wed, 1 Apr 2026 12:02:10 +0000 Subject: [PATCH 5/6] Fix import ordering in uberon-edit file --- src/ontology/uberon-edit.obo | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/ontology/uberon-edit.obo b/src/ontology/uberon-edit.obo index 82263a8e9..4dc8aec17 100644 --- a/src/ontology/uberon-edit.obo +++ b/src/ontology/uberon-edit.obo @@ -57,8 +57,8 @@ treat-xrefs-as-is_a: VHOG remark: Aurelie Comte, Bill Bug, Catherine Leroy, Duncan Davidson and Trish Whetzel are also contributors. However their ORCIDs were not found. import: http://purl.obolibrary.org/obo/uberon/components/disjoint_union_over.owl import: http://purl.obolibrary.org/obo/uberon/components/hra_depiction_3d_images.owl -import: http://purl.obolibrary.org/obo/uberon/components/hra_subset.owl import: http://purl.obolibrary.org/obo/uberon/components/hra_skeleton.owl +import: http://purl.obolibrary.org/obo/uberon/components/hra_subset.owl import: http://purl.obolibrary.org/obo/uberon/components/in-subset.owl import: http://purl.obolibrary.org/obo/uberon/components/mappings.owl import: http://purl.obolibrary.org/obo/uberon/components/vasculature_class.owl From 37d93d1ba4a8f79330b5d5887c2c1f25ee81857c Mon Sep 17 00:00:00 2001 From: Ugur Bayindir Date: Wed, 1 Apr 2026 14:10:50 +0000 Subject: [PATCH 6/6] Uberon release v2026-04-01 --- src/ontology/bridge/cl-bridge-to-caro.owl | 2 +- src/ontology/bridge/cl-bridge-to-ehdaa2.owl | 2 +- src/ontology/bridge/cl-bridge-to-emapa.owl | 2 +- src/ontology/bridge/cl-bridge-to-fbbt.owl | 2 +- src/ontology/bridge/cl-bridge-to-fma.owl | 2 +- src/ontology/bridge/cl-bridge-to-go.owl | 2 +- src/ontology/bridge/cl-bridge-to-kupo.owl | 2 +- src/ontology/bridge/cl-bridge-to-ma.owl | 2 +- src/ontology/bridge/cl-bridge-to-ncit.owl | 2 +- src/ontology/bridge/cl-bridge-to-sctid.owl | 2 +- src/ontology/bridge/cl-bridge-to-wbbt.owl | 2 +- src/ontology/bridge/cl-bridge-to-xao.owl | 2 +- src/ontology/bridge/cl-bridge-to-zfa.owl | 2 +- src/ontology/bridge/uberon-bridge-to-aeo.owl | 2 +- src/ontology/bridge/uberon-bridge-to-bfo.owl | 18 +- src/ontology/bridge/uberon-bridge-to-caro.owl | 17 +- src/ontology/bridge/uberon-bridge-to-dhba.owl | 2 +- .../bridge/uberon-bridge-to-ehdaa2.owl | 2 +- .../bridge/uberon-bridge-to-emapa.owl | 2 +- src/ontology/bridge/uberon-bridge-to-fbbt.owl | 2 +- src/ontology/bridge/uberon-bridge-to-fbdv.owl | 2 +- src/ontology/bridge/uberon-bridge-to-fma.owl | 2 +- src/ontology/bridge/uberon-bridge-to-go.owl | 2 +- src/ontology/bridge/uberon-bridge-to-hao.owl | 2 +- src/ontology/bridge/uberon-bridge-to-hba.owl | 2 +- .../bridge/uberon-bridge-to-hsapdv.owl | 2 +- src/ontology/bridge/uberon-bridge-to-kupo.owl | 2 +- src/ontology/bridge/uberon-bridge-to-ma.owl | 2 +- .../bridge/uberon-bridge-to-mmusdv.owl | 2 +- src/ontology/bridge/uberon-bridge-to-ncit.owl | 2 +- src/ontology/bridge/uberon-bridge-to-oges.owl | 2 +- src/ontology/bridge/uberon-bridge-to-pba.owl | 2 +- .../bridge/uberon-bridge-to-sctid.owl | 2 +- src/ontology/bridge/uberon-bridge-to-spd.owl | 2 +- .../bridge/uberon-bridge-to-sslso.owl | 2 +- src/ontology/bridge/uberon-bridge-to-tads.owl | 2 +- src/ontology/bridge/uberon-bridge-to-tgma.owl | 2 +- src/ontology/bridge/uberon-bridge-to-wbbt.owl | 2 +- src/ontology/bridge/uberon-bridge-to-wbls.owl | 2 +- src/ontology/bridge/uberon-bridge-to-xao.owl | 2 +- src/ontology/bridge/uberon-bridge-to-zfa.owl | 2 +- src/ontology/bridge/uberon-bridge-to-zfs.owl | 2 +- src/ontology/components/hra_skeleton.owl | 3347 +- src/ontology/diffs/uberon-diff.md | 11666 ++++- .../reports/uberon-edit.obo-obo-report.tsv | 198 +- subsets/life-stages-composite.obo | 33 +- uberon-base.owl | 39775 +++++++++------- uberon.obo | 20692 +++++--- 48 files changed, 46745 insertions(+), 29081 deletions(-) diff --git a/src/ontology/bridge/cl-bridge-to-caro.owl b/src/ontology/bridge/cl-bridge-to-caro.owl index 6e8d66ada..a29e1c7ba 100644 --- a/src/ontology/bridge/cl-bridge-to-caro.owl +++ b/src/ontology/bridge/cl-bridge-to-caro.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/cl-bridge-to-ehdaa2.owl b/src/ontology/bridge/cl-bridge-to-ehdaa2.owl index 1606a86a6..cddc08061 100644 --- a/src/ontology/bridge/cl-bridge-to-ehdaa2.owl +++ b/src/ontology/bridge/cl-bridge-to-ehdaa2.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Jonathan Bard CL editors Equivalence axioms between EHDAA2 and CL. EHDAA2 replaces EHDAA. diff --git a/src/ontology/bridge/cl-bridge-to-emapa.owl b/src/ontology/bridge/cl-bridge-to-emapa.owl index a7233d71b..4a6e1ce16 100644 --- a/src/ontology/bridge/cl-bridge-to-emapa.owl +++ b/src/ontology/bridge/cl-bridge-to-emapa.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Anne Niknejad Aurelie Comte CL editors diff --git a/src/ontology/bridge/cl-bridge-to-fbbt.owl b/src/ontology/bridge/cl-bridge-to-fbbt.owl index 4ffbf408e..25fe67284 100644 --- a/src/ontology/bridge/cl-bridge-to-fbbt.owl +++ b/src/ontology/bridge/cl-bridge-to-fbbt.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + David Osumi-Sutherland CL editors Taxonomic equivalence axioms between the Drosophila Anatomy Ontology and CL. diff --git a/src/ontology/bridge/cl-bridge-to-fma.owl b/src/ontology/bridge/cl-bridge-to-fma.owl index 5fc2905a0..c7660f751 100644 --- a/src/ontology/bridge/cl-bridge-to-fma.owl +++ b/src/ontology/bridge/cl-bridge-to-fma.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Onard Mejino Terry Hayamizu CL editors diff --git a/src/ontology/bridge/cl-bridge-to-go.owl b/src/ontology/bridge/cl-bridge-to-go.owl index 801485d7e..265618fc0 100644 --- a/src/ontology/bridge/cl-bridge-to-go.owl +++ b/src/ontology/bridge/cl-bridge-to-go.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/cl-bridge-to-kupo.owl b/src/ontology/bridge/cl-bridge-to-kupo.owl index ecf062809..9e7c560a0 100644 --- a/src/ontology/bridge/cl-bridge-to-kupo.owl +++ b/src/ontology/bridge/cl-bridge-to-kupo.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/cl-bridge-to-ma.owl b/src/ontology/bridge/cl-bridge-to-ma.owl index 6ef0f4731..8b503cf8b 100644 --- a/src/ontology/bridge/cl-bridge-to-ma.owl +++ b/src/ontology/bridge/cl-bridge-to-ma.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + George Gkoutos CL editors Terry Hayamizu diff --git a/src/ontology/bridge/cl-bridge-to-ncit.owl b/src/ontology/bridge/cl-bridge-to-ncit.owl index 3af9d1031..e4ab519dd 100644 --- a/src/ontology/bridge/cl-bridge-to-ncit.owl +++ b/src/ontology/bridge/cl-bridge-to-ncit.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/cl-bridge-to-sctid.owl b/src/ontology/bridge/cl-bridge-to-sctid.owl index 506eb8fdf..4752f7cc5 100644 --- a/src/ontology/bridge/cl-bridge-to-sctid.owl +++ b/src/ontology/bridge/cl-bridge-to-sctid.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + OBOL CL editors Rough subclass axioms between SNOMED-CT and CL. Note that SNOMED is not open, unlike other ontologies used in bridges here. Consequently, the mappings here are not verified to the same degree. diff --git a/src/ontology/bridge/cl-bridge-to-wbbt.owl b/src/ontology/bridge/cl-bridge-to-wbbt.owl index 888cd0e3a..c0de9cc50 100644 --- a/src/ontology/bridge/cl-bridge-to-wbbt.owl +++ b/src/ontology/bridge/cl-bridge-to-wbbt.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/cl-bridge-to-xao.owl b/src/ontology/bridge/cl-bridge-to-xao.owl index 67db47a49..e70674b61 100644 --- a/src/ontology/bridge/cl-bridge-to-xao.owl +++ b/src/ontology/bridge/cl-bridge-to-xao.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Erik Segerdell VG Ponferrada CL editors diff --git a/src/ontology/bridge/cl-bridge-to-zfa.owl b/src/ontology/bridge/cl-bridge-to-zfa.owl index bb817429a..a4e8df419 100644 --- a/src/ontology/bridge/cl-bridge-to-zfa.owl +++ b/src/ontology/bridge/cl-bridge-to-zfa.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Melissa Haendel Veri Van Slyke Yvonne Bradford diff --git a/src/ontology/bridge/uberon-bridge-to-aeo.owl b/src/ontology/bridge/uberon-bridge-to-aeo.owl index ba8e21d5a..227ddfa55 100644 --- a/src/ontology/bridge/uberon-bridge-to-aeo.owl +++ b/src/ontology/bridge/uberon-bridge-to-aeo.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-bfo.owl b/src/ontology/bridge/uberon-bridge-to-bfo.owl index 648251bc7..89b71c560 100644 --- a/src/ontology/bridge/uberon-bridge-to-bfo.owl +++ b/src/ontology/bridge/uberon-bridge-to-bfo.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + @@ -41,14 +41,6 @@ - - - - processual entity (BFO) - - - - @@ -57,14 +49,6 @@ - - - - - - - - diff --git a/src/ontology/bridge/uberon-bridge-to-caro.owl b/src/ontology/bridge/uberon-bridge-to-caro.owl index d3f8b3288..e30cdf171 100644 --- a/src/ontology/bridge/uberon-bridge-to-caro.owl +++ b/src/ontology/bridge/uberon-bridge-to-caro.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + @@ -410,6 +410,15 @@ + + + + + gross anatomical part (CARO) + + + + @@ -509,6 +518,12 @@ + + + + + + diff --git a/src/ontology/bridge/uberon-bridge-to-dhba.owl b/src/ontology/bridge/uberon-bridge-to-dhba.owl index b18f54996..77b5e9fc3 100644 --- a/src/ontology/bridge/uberon-bridge-to-dhba.owl +++ b/src/ontology/bridge/uberon-bridge-to-dhba.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl b/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl index ef9ad9096..e6f13d65a 100644 --- a/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl +++ b/src/ontology/bridge/uberon-bridge-to-ehdaa2.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Jonathan Bard Uberon editors Equivalence axioms between EHDAA2 and Uberon. EHDAA2 replaces EHDAA. diff --git a/src/ontology/bridge/uberon-bridge-to-emapa.owl b/src/ontology/bridge/uberon-bridge-to-emapa.owl index e53bc127c..e84294462 100644 --- a/src/ontology/bridge/uberon-bridge-to-emapa.owl +++ b/src/ontology/bridge/uberon-bridge-to-emapa.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Anne Niknejad Aurelie Comte Uberon editors diff --git a/src/ontology/bridge/uberon-bridge-to-fbbt.owl b/src/ontology/bridge/uberon-bridge-to-fbbt.owl index b9b38ed78..2a7eaea5d 100644 --- a/src/ontology/bridge/uberon-bridge-to-fbbt.owl +++ b/src/ontology/bridge/uberon-bridge-to-fbbt.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + David Osumi-Sutherland Uberon editors Taxonomic equivalence axioms between the Drosophila Anatomy Ontology and Uberon. diff --git a/src/ontology/bridge/uberon-bridge-to-fbdv.owl b/src/ontology/bridge/uberon-bridge-to-fbdv.owl index 52831ef97..21cb08adc 100644 --- a/src/ontology/bridge/uberon-bridge-to-fbdv.owl +++ b/src/ontology/bridge/uberon-bridge-to-fbdv.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-fma.owl b/src/ontology/bridge/uberon-bridge-to-fma.owl index 38cc71dab..2eeb56739 100644 --- a/src/ontology/bridge/uberon-bridge-to-fma.owl +++ b/src/ontology/bridge/uberon-bridge-to-fma.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Onard Mejino Terry Hayamizu Uberon editors diff --git a/src/ontology/bridge/uberon-bridge-to-go.owl b/src/ontology/bridge/uberon-bridge-to-go.owl index a434e1cc8..325362790 100644 --- a/src/ontology/bridge/uberon-bridge-to-go.owl +++ b/src/ontology/bridge/uberon-bridge-to-go.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-hao.owl b/src/ontology/bridge/uberon-bridge-to-hao.owl index 6e4459a91..cf80b253f 100644 --- a/src/ontology/bridge/uberon-bridge-to-hao.owl +++ b/src/ontology/bridge/uberon-bridge-to-hao.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-hba.owl b/src/ontology/bridge/uberon-bridge-to-hba.owl index aa0dabfcc..e64dd8240 100644 --- a/src/ontology/bridge/uberon-bridge-to-hba.owl +++ b/src/ontology/bridge/uberon-bridge-to-hba.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-hsapdv.owl b/src/ontology/bridge/uberon-bridge-to-hsapdv.owl index 874ec49f4..068475010 100644 --- a/src/ontology/bridge/uberon-bridge-to-hsapdv.owl +++ b/src/ontology/bridge/uberon-bridge-to-hsapdv.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-kupo.owl b/src/ontology/bridge/uberon-bridge-to-kupo.owl index 744ce21d7..5e14fc398 100644 --- a/src/ontology/bridge/uberon-bridge-to-kupo.owl +++ b/src/ontology/bridge/uberon-bridge-to-kupo.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-ma.owl b/src/ontology/bridge/uberon-bridge-to-ma.owl index 08bedac73..7e95ede02 100644 --- a/src/ontology/bridge/uberon-bridge-to-ma.owl +++ b/src/ontology/bridge/uberon-bridge-to-ma.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + George Gkoutos Terry Hayamizu Uberon editors diff --git a/src/ontology/bridge/uberon-bridge-to-mmusdv.owl b/src/ontology/bridge/uberon-bridge-to-mmusdv.owl index 51455f737..c4cf09c77 100644 --- a/src/ontology/bridge/uberon-bridge-to-mmusdv.owl +++ b/src/ontology/bridge/uberon-bridge-to-mmusdv.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-ncit.owl b/src/ontology/bridge/uberon-bridge-to-ncit.owl index f8f63d02a..598bb9e64 100644 --- a/src/ontology/bridge/uberon-bridge-to-ncit.owl +++ b/src/ontology/bridge/uberon-bridge-to-ncit.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-oges.owl b/src/ontology/bridge/uberon-bridge-to-oges.owl index 230b58d97..281eb52b5 100644 --- a/src/ontology/bridge/uberon-bridge-to-oges.owl +++ b/src/ontology/bridge/uberon-bridge-to-oges.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-pba.owl b/src/ontology/bridge/uberon-bridge-to-pba.owl index 95f071a9f..22bd89d1a 100644 --- a/src/ontology/bridge/uberon-bridge-to-pba.owl +++ b/src/ontology/bridge/uberon-bridge-to-pba.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-sctid.owl b/src/ontology/bridge/uberon-bridge-to-sctid.owl index 4f7af9d08..049667de2 100644 --- a/src/ontology/bridge/uberon-bridge-to-sctid.owl +++ b/src/ontology/bridge/uberon-bridge-to-sctid.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + OBOL Uberon editors Rough subclass axioms between SNOMED-CT and Uberon. Note that SNOMED is not open, unlike other ontologies used in bridges here. Consequently, the mappings here are not verified to the same degree. diff --git a/src/ontology/bridge/uberon-bridge-to-spd.owl b/src/ontology/bridge/uberon-bridge-to-spd.owl index 2f2dac9da..53a297272 100644 --- a/src/ontology/bridge/uberon-bridge-to-spd.owl +++ b/src/ontology/bridge/uberon-bridge-to-spd.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-sslso.owl b/src/ontology/bridge/uberon-bridge-to-sslso.owl index 702257e28..d715117a2 100644 --- a/src/ontology/bridge/uberon-bridge-to-sslso.owl +++ b/src/ontology/bridge/uberon-bridge-to-sslso.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-tads.owl b/src/ontology/bridge/uberon-bridge-to-tads.owl index 6e9581779..69c34aabb 100644 --- a/src/ontology/bridge/uberon-bridge-to-tads.owl +++ b/src/ontology/bridge/uberon-bridge-to-tads.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-tgma.owl b/src/ontology/bridge/uberon-bridge-to-tgma.owl index f5a81d4b9..a9df78b37 100644 --- a/src/ontology/bridge/uberon-bridge-to-tgma.owl +++ b/src/ontology/bridge/uberon-bridge-to-tgma.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-wbbt.owl b/src/ontology/bridge/uberon-bridge-to-wbbt.owl index 5e63ce8ab..ab31905ce 100644 --- a/src/ontology/bridge/uberon-bridge-to-wbbt.owl +++ b/src/ontology/bridge/uberon-bridge-to-wbbt.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-wbls.owl b/src/ontology/bridge/uberon-bridge-to-wbls.owl index 201d7ebb0..df4a31ac7 100644 --- a/src/ontology/bridge/uberon-bridge-to-wbls.owl +++ b/src/ontology/bridge/uberon-bridge-to-wbls.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/bridge/uberon-bridge-to-xao.owl b/src/ontology/bridge/uberon-bridge-to-xao.owl index 462fed915..7cf3fb545 100644 --- a/src/ontology/bridge/uberon-bridge-to-xao.owl +++ b/src/ontology/bridge/uberon-bridge-to-xao.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Erik Segerdell VG Ponferrada Uberon editors diff --git a/src/ontology/bridge/uberon-bridge-to-zfa.owl b/src/ontology/bridge/uberon-bridge-to-zfa.owl index dd951201a..b8f069f6a 100644 --- a/src/ontology/bridge/uberon-bridge-to-zfa.owl +++ b/src/ontology/bridge/uberon-bridge-to-zfa.owl @@ -9,7 +9,7 @@ xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:terms="http://purl.org/dc/terms/"> - + Melissa Haendel Veri Van Slyke Yvonne Bradford diff --git a/src/ontology/bridge/uberon-bridge-to-zfs.owl b/src/ontology/bridge/uberon-bridge-to-zfs.owl index 44f902af3..445a4e131 100644 --- a/src/ontology/bridge/uberon-bridge-to-zfs.owl +++ b/src/ontology/bridge/uberon-bridge-to-zfs.owl @@ -8,7 +8,7 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + diff --git a/src/ontology/components/hra_skeleton.owl b/src/ontology/components/hra_skeleton.owl index 9934d34b0..6719d2de3 100644 --- a/src/ontology/components/hra_skeleton.owl +++ b/src/ontology/components/hra_skeleton.owl @@ -7,10 +7,9 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2026-03-20") + +Annotation(owl:versionInfo "2026-04-01") -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -92,10 +91,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -128,7 +125,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -140,7 +136,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -150,7 +145,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -168,13 +162,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -202,7 +192,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -210,12 +199,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -250,13 +237,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -267,15 +249,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -291,7 +270,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -349,12 +327,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -367,11 +343,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -402,42 +375,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(ObjectProperty()) -Declaration(ObjectProperty()) -Declaration(ObjectProperty()) Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) @@ -448,4709 +393,3129 @@ Declaration(AnnotationProperty( (acetabulum of os coxa) - -AnnotationAssertion( "A zone of bone organ forming the deep, cup-shaped socket on the lateral surface of the os coxa (innominate bone), created by the fusion of the ilium, ischium, and pubis, which articulates with the head of the femur to form the hip joint.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "acetabulum of os coxa") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (acromial process of scapula) -AnnotationAssertion( "A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "acromial process of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (alae of sacrum) -AnnotationAssertion( "A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alae of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (alveolar border of mandible) -AnnotationAssertion( "A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar border of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior arch of first cervical vertebra) -AnnotationAssertion( "An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior arch of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior clinoid process of sphenoid bone) -AnnotationAssertion( "A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior clinoid process of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior gluteal line of ilium of os coxa) -AnnotationAssertion( "A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior gluteal line of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior sacral foramina of sacrum) -AnnotationAssertion( "A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior sacral foramina of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterior tubercle of first cervical vertebra) -AnnotationAssertion( "A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior tubercle of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (anterolateral tubercle of tibia) -AnnotationAssertion( "A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterolateral tubercle of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (arcuate line of ilium of os coxa) -AnnotationAssertion( "A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "arcuate line of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular surface for cuboid bone of calcaneus) -AnnotationAssertion( "A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "articular surface for cuboid bone of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (articular tubercle of squamous part of temporal bone) -AnnotationAssertion( "A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "articular tubercle of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (auricular surface of ilium of os coxa) -AnnotationAssertion( "A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "auricular surface of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of first distal phalanx of foot) -AnnotationAssertion( "A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "base of first distal phalanx of foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of first distal phalanx of hand) -AnnotationAssertion( "A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "base of first distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of first proximal phalanx of foot) -AnnotationAssertion( "A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "base of first proximal phalanx of foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (base of first proximal phalanx of hand) -AnnotationAssertion( "A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "base of first proximal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of calcaneus) -AnnotationAssertion( "A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of second cervical vertebra) -AnnotationAssertion( "A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (body of sphenoid bone) -AnnotationAssertion( "A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "body of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (calcaneal sulcus of calcaneus) -AnnotationAssertion( "A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "calcaneal sulcus of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (coccygeal cornu of coccyx) -AnnotationAssertion( "A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Coccyx") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Coccyx") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coccygeal cornu of coccyx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (coronoid fossa of humerus) -AnnotationAssertion( "A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Humerus") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Humerus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "coronoid fossa of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (costal groove of first rib) -AnnotationAssertion( "A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "costal groove of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (costal groove of twelfth rib) -AnnotationAssertion( "A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "costal groove of twelfth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (costal notches of sternum) -AnnotationAssertion( "A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sternum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sternum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "costal notches of sternum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (crista galla of ethmoid bone) -AnnotationAssertion( "A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ethmoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ethmoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "crista galla of ethmoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (digastric fossa of mandible) -AnnotationAssertion( "A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "digastric fossa of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (dorsum sellae of sphenoid bone) -AnnotationAssertion( "A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "dorsum sellae of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmoidal air cells of ethmoid bone) -AnnotationAssertion( "A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ethmoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ethmoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoidal air cells of ethmoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (ethmoidal bulla of ethmoid bone) -AnnotationAssertion( "A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ethmoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ethmoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ethmoidal bulla of ethmoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (external auditory meatus of squamous part of temporal bone) -AnnotationAssertion( "A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "external auditory meatus of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (external occipital protuberance of squamous part of occipital bone) - -AnnotationAssertion( "A skeletal element projection located on the outer surface of the squamous part of the occipital bone, at the junction of the superior and inferior nuchal lines. It serves as a landmark and attachment point for the ligamentum nuchae and trapezius muscle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Occipital_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "external occipital protuberance of squamous part of occipital bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (facet of eleventh rib) -AnnotationAssertion( "A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facet of eleventh rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (facet of first rib) -AnnotationAssertion( "A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facet of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (facet of tenth rib) -AnnotationAssertion( "A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facet of tenth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (facet of twelfth rib) -AnnotationAssertion( "A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "facet of twelfth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular facet of tibia) -AnnotationAssertion( "A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibular facet of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular notch of tibia) -AnnotationAssertion( "A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibular notch of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (fibular trochlea of calcaneus) -AnnotationAssertion( "A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibular trochlea of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (foramen ovale of sphenoid bone) -AnnotationAssertion( "A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "foramen ovale of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (fossa for lacrimal sac of lacrimal bone) -AnnotationAssertion( "A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lacrimal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lacrimal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fossa for lacrimal sac of lacrimal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (frontal crest of frontal bone) -AnnotationAssertion( "A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Frontal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Frontal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "frontal crest of frontal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (glabella of frontal bone) -AnnotationAssertion( "A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Frontal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Frontal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "glabella of frontal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (glenoid fossa of scapula) - -AnnotationAssertion( "A shallow, ovoid bone fossa on the superolateral angle of the scapula that articulates with the head of the humerus to form the glenohumeral joint; its articular surface is deepened peripherally by the fibrocartilaginous glenoid labrum and is bounded superiorly by the supraglenoid tubercle and inferiorly by the infraglenoid tubercle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "glenoid fossa of scapula") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (gluteal surface of ilium of os coxa) -AnnotationAssertion( "A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gluteal surface of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (gluteal tuberosity of femur) -AnnotationAssertion( "A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Femur") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Femur") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gluteal tuberosity of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (granula foveaolae of parietal bone) -AnnotationAssertion( "A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Parietal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Parietal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "granula foveaolae of parietal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater palatine canal of maxilla) -AnnotationAssertion( "A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Maxilla") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Maxilla") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "greater palatine canal of maxilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (greater wings of sphenoid bone) -AnnotationAssertion( "A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "greater wings of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for fibularis longus tendon of cuboid) -AnnotationAssertion( "A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cuboid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cuboid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for fibularis longus tendon of cuboid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for middle meningeal a. of parietal bone) -AnnotationAssertion( "A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Parietal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Parietal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for middle meningeal a. of parietal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for nasopalatine nerve of vomer) -AnnotationAssertion( "A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Vomer") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Vomer") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for nasopalatine nerve of vomer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for posterior deep temporal artery of squamous part of temporal bone) -AnnotationAssertion( "A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for posterior deep temporal artery of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (groove for sigmoid sinus of mastoid part of temporal bone) - -AnnotationAssertion( "A surface groove on the inner (endocranial) surface of the mastoid part of the temporal bone, lodging the sigmoid sinus as it curves from the transverse sinus inferiorly toward the jugular foramen. The groove is bordered medially by the posterior cranial fossa dura.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "groove for sigmoid sinus of mastoid part of temporal bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for subclavian artery of first rib) -AnnotationAssertion( "A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for subclavian artery of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for subclavian vein of first rib) -AnnotationAssertion( "A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for subclavian vein of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for superior sagittal sinus of frontal bone) -AnnotationAssertion( "A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Frontal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Frontal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for superior sagittal sinus of frontal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for superior sagittal sinus of parietal bone) -AnnotationAssertion( "A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Parietal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Parietal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for superior sagittal sinus of parietal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for tendon of flexor hallucis longus muscle of calcaneus) -AnnotationAssertion( "A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for tendon of flexor hallucis longus muscle of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for transverse sinus of squamous part of occipital bone) -AnnotationAssertion( "A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Occipital_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Occipital_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for transverse sinus of squamous part of occipital bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (groove for vertebral artery of first cervical vertebra) -AnnotationAssertion( "A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "groove for vertebral artery of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of radius of radius) -AnnotationAssertion( "A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Radius_(bone)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Radius_(bone)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of radius of radius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of second distal phalanx of foot) -AnnotationAssertion( "A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of second distal phalanx of foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of second distal phalanx of hand) -AnnotationAssertion( "A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of second distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of second middle phalanx of foot) -AnnotationAssertion( "A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of second middle phalanx of foot") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of second middle phalanx of hand) -AnnotationAssertion( "A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of second middle phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of third middle phalanx of hand) -AnnotationAssertion( "A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of third middle phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (head of ulna of ulna) -AnnotationAssertion( "A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ulna") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ulna") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "head of ulna of ulna") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (hiatus and groove of petrous part of temporal bone for greater petrosal nerve) -AnnotationAssertion( "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hiatus and groove of petrous part of temporal bone for greater petrosal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (hiatus and groove of petrous part of temporal bone for lesser petrosal nerve) -AnnotationAssertion( "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hiatus and groove of petrous part of temporal bone for lesser petrosal nerve") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (hyoid region bone) -AnnotationAssertion( "A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hyoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hyoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hyoid region bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (hypophyseal fossa of sphenoid bone) - -AnnotationAssertion( "A bone fossa forming the central depression of the sella turcica on the superior surface of the sphenoid body, bounded anteriorly by the tuberculum sellae and posteriorly by the dorsum sellae; it lodges the pituitary gland and is roofed by the diaphragma sellae.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "hypophyseal fossa of sphenoid bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (iliac crest of ilium of os coxa) - -AnnotationAssertion( "A crest forming the thick, curved superior border of the ilium of the os coxa (innominate bone), extending from the anterior superior iliac spine to the posterior superior iliac spine and providing extensive attachment for the muscles of the abdominal wall, back, and thigh.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "iliac crest of ilium of os coxa") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (iliac fossa of ilium of os coxa) - -AnnotationAssertion( "A bone fossa forming the large, smooth, concave medial surface of the ilium of the os coxa (innominate bone), providing the origin for the iliacus muscle and bounded by the arcuate line inferiorly.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "iliac fossa of ilium of os coxa") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac tubercle of ilium of os coxa) -AnnotationAssertion( "A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliac tubercle of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliac tuberosity of ilium of os coxa) -AnnotationAssertion( "A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliac tuberosity of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (iliopubic ramus of os coxa) -AnnotationAssertion( "A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "iliopubic ramus of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (incisive foramen of maxilla) - -AnnotationAssertion( "A bone foramen in the midline of the anterior hard palate, immediately posterior to the central incisor teeth, that transmits the nasopalatine nerve and the terminal branches of the greater palatine vessels from the nasal cavity to the oral mucosa.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Maxilla") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "incisive foramen of maxilla") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of eighth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of eighth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of eleventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of eleventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of fifth cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of fifth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of fifth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of fifth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of first cervical vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of first thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of first thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of fourth cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of fourth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of fourth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of fourth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of ninth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of ninth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of second cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of second thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of second thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of seventh cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of seventh cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of seventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of seventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of sixth cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of sixth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of sixth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of sixth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of tenth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of tenth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of third cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of third cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of third thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of third thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular facet of twelfth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular facet of twelfth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular process of first cervical vertebra) -AnnotationAssertion( "A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular process of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior articular process of second cervical vertebra) -AnnotationAssertion( "A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior articular process of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior costal facet of eleventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior costal facet of eleventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior costal facet of tenth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior costal facet of tenth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior mental spine of mandible) -AnnotationAssertion( "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior mental spine of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior nuchal line of squamous part of occipital bone) -AnnotationAssertion( "A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Occipital_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Occipital_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior nuchal line of squamous part of occipital bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior vertebral notch of first cervical vertebra) -AnnotationAssertion( "A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "inferior vertebral notch of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraglenoid tubercle of scapula) -AnnotationAssertion( "A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "infraglenoid tubercle of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (infraorbital canal of maxilla) - -AnnotationAssertion( "A bone foramen forming a canal that traverses the body of the maxilla from the infraorbital groove on the orbital floor to the infraorbital foramen on the anterior face, transmitting the infraorbital nerve and vessels.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Maxilla") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "infraorbital canal of maxilla") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (infraspinous fossa of scapula) -AnnotationAssertion( "A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "infraspinous fossa of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (intercondylar notch of femur) -AnnotationAssertion( "A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Femur") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Femur") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intercondylar notch of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (intermediate sacral crest of sacrum) -AnnotationAssertion( "A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "intermediate sacral crest of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal auditory meatus of petrous part of temporal bone) -AnnotationAssertion( "A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal auditory meatus of petrous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (internal occipital protuberance of squamous part of occipital bone) -AnnotationAssertion( "A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Occipital_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Occipital_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "internal occipital protuberance of squamous part of occipital bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (interosseus border of tibia) -AnnotationAssertion( "A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "interosseus border of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (ischial body of ischium of os coxa) -AnnotationAssertion( "A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ischial body of ischium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (ischial ramus of ischium of os coxa) - -AnnotationAssertion( "A skeletal element projection forming the flattened bar of bone that projects anteriorly and medially from the ischial tuberosity of the ischium of the os coxa (innominate bone), joining the inferior pubic ramus to complete the inferior boundary of the obturator foramen and providing attachment for the adductor magnus and obturator externus muscles.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "ischial ramus of ischium of os coxa") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lacrimal fossa of frontal bone) -AnnotationAssertion( "A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Frontal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Frontal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lacrimal fossa of frontal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina of first cervical vertebra) -AnnotationAssertion( "A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina of second cervical vertebra) -AnnotationAssertion( "A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lamina of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral process of tuberosity of calcaneus) -AnnotationAssertion( "A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral process of tuberosity of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (lateral pterygoid plate of sphenoid bone) - -AnnotationAssertion( "A zone of bone organ forming the broader, flatter lateral lamina of the pterygoid process of the sphenoid bone, projecting inferiorly and slightly laterally from the junction of the body and greater wing; its lateral surface provides the principal origin for the lower head of the lateral pterygoid muscle and part of the medial pterygoid muscle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "lateral pterygoid plate of sphenoid bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral sacral crest of sacrum) -AnnotationAssertion( "A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lateral sacral crest of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lesser wings of sphenoid bone) -AnnotationAssertion( "A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lesser wings of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (linea terminalis of sacrum) -AnnotationAssertion( "A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "linea terminalis of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lunate surface of os coxa) -AnnotationAssertion( "A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lunate surface of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary process of fifth lumbar vertebra) -AnnotationAssertion( "A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillary process of fifth lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary process of first lumbar vertebra) -AnnotationAssertion( "A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillary process of first lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary process of fourth lumbar vertebra) -AnnotationAssertion( "A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillary process of fourth lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary process of second lumbar vertebra) -AnnotationAssertion( "A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillary process of second lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mammillary process of third lumbar vertebra) -AnnotationAssertion( "A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mammillary process of third lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular angle of mandible) -AnnotationAssertion( "A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular angle of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular foramen of mandible) -AnnotationAssertion( "A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular foramen of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular fossa of squamous part of temporal bone) -AnnotationAssertion( "A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular fossa of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mandibular notch of mandible) -AnnotationAssertion( "A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mandibular notch of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mastoid foramen of mastoid part of temporal bone) -AnnotationAssertion( "A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mastoid foramen of mastoid part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mastoid notch of mastoid part of temporal bone) -AnnotationAssertion( "A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mastoid notch of mastoid part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial malleolus of tibia) -AnnotationAssertion( "A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial malleolus of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial process of tuberosity of calcaneus) -AnnotationAssertion( "A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial process of tuberosity of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (medial pterygoid plate of sphenoid bone) -AnnotationAssertion( "A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "medial pterygoid plate of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (median sacral crest of sacrum) -AnnotationAssertion( "A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "median sacral crest of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mental protuberance of mandible) -AnnotationAssertion( "A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mental protuberance of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mylohyoid groove of mandible) -AnnotationAssertion( "A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mylohyoid groove of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (mylohyoid line of mandible) -AnnotationAssertion( "A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mylohyoid line of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (nasolacrimal canal of maxilla) -AnnotationAssertion( "A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Maxilla") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Maxilla") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "nasolacrimal canal of maxilla") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (neck of radius of radius) -AnnotationAssertion( "A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Radius_(bone)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Radius_(bone)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "neck of radius of radius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of eighth rib) -AnnotationAssertion( "A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of eighth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of fifth rib) -AnnotationAssertion( "A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of fifth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of first rib) -AnnotationAssertion( "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of fourth rib) -AnnotationAssertion( "A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of fourth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of ninth rib) -AnnotationAssertion( "A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of ninth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of second rib) -AnnotationAssertion( "A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of second rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of seventh rib) -AnnotationAssertion( "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of seventh rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of sixth rib) -AnnotationAssertion( "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of sixth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of tenth rib) -AnnotationAssertion( "A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of tenth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-articular facet of tubercle of third rib) -AnnotationAssertion( "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "non-articular facet of tubercle of third rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (obturator foramen of os coxa) - -AnnotationAssertion( "A bone foramen forming the large, oval opening in the os coxa (innominate bone), bounded by the pubis anterosuperiorly and the ischium posteroinferiorly, almost entirely closed by the obturator membrane in life and traversed by the obturator vessels and nerve through the obturator canal.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "obturator foramen of os coxa") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (obturator groove of pubis of os coxa) -AnnotationAssertion( "A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "obturator groove of pubis of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (occipital condyle of basilar part of occipital bone) - -AnnotationAssertion( "A condyle forming one of a pair of oval, convex articular surfaces on the inferior aspect of the occipital bone, flanking the foramen magnum. Each condyle articulates with the superior articular facet of the atlas (C1 vertebra), permitting flexion and extension of the head.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Occipital_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "occipital condyle of basilar part of occipital bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (olecranon fossa of humerus) - -AnnotationAssertion( "A skeletal element projection forming the large, deep depression on the posterior surface of the distal humerus, immediately superior to the trochlea, that receives the olecranon process of the ulna when the elbow is fully extended. It is the deepest fossa of the distal humerus and may be perforated in some individuals.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Humerus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "olecranon fossa of humerus") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (olecranon of ulna) - -AnnotationAssertion( "A skeletal element projection forming the large, curved proximal process of the ulna that projects posteriorly to form the point of the elbow; it fits into the olecranon fossa of the humerus during full extension and provides the proximal attachment for the triceps brachii tendon.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ulna") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "olecranon of ulna") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory foramina of ethmoid bone) -AnnotationAssertion( "A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ethmoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ethmoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "olfactory foramina of ethmoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (optic canal of sphenoid bone) - -AnnotationAssertion( "A bone foramen forming a bony channel between the two roots of the lesser wing of the sphenoid bone, connecting the middle cranial fossa to the orbital apex; it transmits the optic nerve (cranial nerve II) and the ophthalmic artery.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "optic canal of sphenoid bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pecten pubis of pubis of os coxa) -AnnotationAssertion( "A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pecten pubis of pubis of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectinal line of femur) -AnnotationAssertion( "A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Femur") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Femur") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pectinal line of femur") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedicle of first cervical vertebra) -AnnotationAssertion( "A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedicle of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pedicle of second cervical vertebra) -AnnotationAssertion( "A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pedicle of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (perpendicular plate of ethmoid bone) -AnnotationAssertion( "A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ethmoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ethmoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "perpendicular plate of ethmoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (petrotympanic fissure of squamous part of temporal bone) -AnnotationAssertion( "A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "petrotympanic fissure of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior arch of first cervical vertebra) -AnnotationAssertion( "An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior arch of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior clinoid process of sphenoid bone) -AnnotationAssertion( "A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior clinoid process of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior gluteal line of ilium of os coxa) -AnnotationAssertion( "A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior gluteal line of ilium of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior sacral foramina of sacrum) -AnnotationAssertion( "A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "posterior sacral foramina of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (posterior tubercle of first cervical vertebra) - -AnnotationAssertion( "A skeletal element projection situated on the posterior midline surface of the posterior arch of the atlas (C1), representing a vestigial spinous process; it serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "posterior tubercle of first cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (postglenoid tubercle of squamous part of temporal bone) -AnnotationAssertion( "A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "postglenoid tubercle of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (pterygoid canal of sphenoid bone) - -AnnotationAssertion( "A bone foramen forming a horizontal tunnel through the base of the pterygoid process of the sphenoid bone, running anteroposteriorly from the anterior wall of the foramen lacerum to open into the posterior wall of the pterygopalatine fossa; it transmits the nerve of the pterygoid canal (Vidian nerve) and the artery of the pterygoid canal.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "pterygoid canal of sphenoid bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygoid fossa of sphenoid bone) -AnnotationAssertion( "A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pterygoid fossa of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygoid fovea of mandible) -AnnotationAssertion( "A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pterygoid fovea of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pterygoid hamulus of sphenoid bone) -AnnotationAssertion( "A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sphenoid_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pterygoid hamulus of sphenoid bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubic body of pubis of os coxa) -AnnotationAssertion( "A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubic body of pubis of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubic crest of pubis of os coxa) -AnnotationAssertion( "A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubic crest of pubis of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (pubic symphysis of pubis of os coxa) - -AnnotationAssertion( "A zone of bone organ forming the medial articular surface of the pubic body of the pubis of the os coxa (innominate bone), covered with a layer of hyaline cartilage and united with the corresponding surface of the opposite pubis by a fibrocartilaginous interpubic disc at the pubic symphysis joint.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "pubic symphysis of pubis of os coxa") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (pubic tubercle of pubis of os coxa) -AnnotationAssertion( "A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Hip_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Hip_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pubic tubercle of pubis of os coxa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial fossa of humerus) -AnnotationAssertion( "A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Humerus") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Humerus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radial fossa of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial groove of humerus) -AnnotationAssertion( "A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Humerus") Annotation( "https://fipat.library.dal.ca/ta2/") "A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Humerus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radial groove of humerus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (radial tuberosity of radius) -AnnotationAssertion( "A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Radius_(bone)") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Radius_(bone)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "radial tuberosity of radius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral apex of sacrum) -AnnotationAssertion( "A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral apex of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral canal of sacrum) -AnnotationAssertion( "A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral canal of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral cornu of sacrum) -AnnotationAssertion( "A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral cornu of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral hiatus of sacrum) -AnnotationAssertion( "A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral hiatus of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral promontory of sacrum) -AnnotationAssertion( "A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral promontory of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral spine of sacrum) -AnnotationAssertion( "A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral spine of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sacral tuberosity of sacrum) -AnnotationAssertion( "A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sacrum") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sacrum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sacral tuberosity of sacrum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (scalene tubercle of first rib) -AnnotationAssertion( "A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scalene tubercle of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (scaphoid tubercle of scaphoid) -AnnotationAssertion( "A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scaphoid tubercle of scaphoid") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapular notch of scapula) -AnnotationAssertion( "A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scapular notch of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (scapular spine of scapula) -AnnotationAssertion( "A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "scapular spine of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (sella turcica of sphenoid bone) - -AnnotationAssertion( "A zone of bone organ forming the saddle-shaped depression on the superior surface of the body of the sphenoid bone, comprising the tuberculum sellae anteriorly, the hypophyseal fossa centrally, and the dorsum sellae posteriorly; it houses the pituitary gland and is named for its resemblance to a Turkish saddle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sphenoid_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "sella turcica of sphenoid bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (shaft of first distal phalanx of hand) -AnnotationAssertion( "A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shaft of first distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (shaft of first proximal phalanx of hand) -AnnotationAssertion( "A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shaft of first proximal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (shaft of radius of radius) -AnnotationAssertion( "A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Radius_(bone)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Radius_(bone)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shaft of radius of radius") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (shaft of ulna of ulna) -AnnotationAssertion( "A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ulna") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ulna") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "shaft of ulna of ulna") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (soleal line of tibia) -AnnotationAssertion( "A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "soleal line of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinous process of first cervical vertebra) -AnnotationAssertion( "A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinous process of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (spinous process of second cervical vertebra) -AnnotationAssertion( "A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "spinous process of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal angle of sternum) -AnnotationAssertion( "A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sternum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sternum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal angle of sternum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of eighth rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of eighth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of eleventh rib) -AnnotationAssertion( "A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of eleventh rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of fifth rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of fifth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of first rib) -AnnotationAssertion( "A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of first rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of fourth rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of fourth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of ninth rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of ninth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of second rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of second rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of seventh rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of seventh rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of sixth rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of sixth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of tenth rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of tenth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of third rib) -AnnotationAssertion( "A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of third rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal end of twelfth rib) -AnnotationAssertion( "A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Rib") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Rib") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal end of twelfth rib") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sternal region bone) -AnnotationAssertion( "A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sternum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sternum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sternal region bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (stylomastoid foramen of petrous part of temporal bone) -AnnotationAssertion( "A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stylomastoid foramen of petrous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sublingual fossa of mandible) -AnnotationAssertion( "A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sublingual fossa of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (submandibular fossa of mandible) -AnnotationAssertion( "A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submandibular fossa of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (supercilary arch of frontal bone) -AnnotationAssertion( "A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Frontal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Frontal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supercilary arch of frontal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of eighth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of eighth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of eleventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of eleventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of fifth cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of fifth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of fifth lumbar vertebra) -AnnotationAssertion( "A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of fifth lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of fifth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of fifth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of first cervical vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of first lumbar vertebra) -AnnotationAssertion( "A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of first lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of first thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of first thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of fourth cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of fourth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of fourth lumbar vertebra) -AnnotationAssertion( "A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of fourth lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of fourth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of fourth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of ninth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of ninth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of second cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of second lumbar vertebra) -AnnotationAssertion( "A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of second lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of second thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of second thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of seventh cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of seventh cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of seventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of seventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of sixth cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of sixth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of sixth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of sixth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of tenth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of tenth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of third cervical vertebra) -AnnotationAssertion( "A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of third cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of third lumbar vertebra) -AnnotationAssertion( "A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of third lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of third thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of third thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular facet of twelfth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular facet of twelfth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular process of first cervical vertebra) -AnnotationAssertion( "A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular process of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior articular process of second cervical vertebra) -AnnotationAssertion( "A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior articular process of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior costal facet of eleventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior costal facet of eleventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior mental spine of mandible) -AnnotationAssertion( "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Mandible") Annotation( "https://fipat.library.dal.ca/ta2/") "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Mandible") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior mental spine of mandible") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior nuchal line of squamous part of occipital bone) -AnnotationAssertion( "A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Occipital_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Occipital_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior nuchal line of squamous part of occipital bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior vertebral notch of first cervical vertebra) -AnnotationAssertion( "A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Atlas_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior vertebral notch of first cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior vertebral notch of second cervical vertebra) -AnnotationAssertion( "A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "superior vertebral notch of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (supinator fossa of ulna) -AnnotationAssertion( "A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Ulna") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ulna") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supinator fossa of ulna") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (supraglenoid tubercle of scapula) - -AnnotationAssertion( "A roughened skeletal element projection at the superior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the biceps brachii muscle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "supraglenoid tubercle of scapula") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (supramastoid crest of squamous part of temporal bone) -AnnotationAssertion( "A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supramastoid crest of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraorbital notch or foramen of frontal bone) -AnnotationAssertion( "A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Frontal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Frontal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraorbital notch or foramen of frontal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (supraspinous fossa of scapula) -AnnotationAssertion( "A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Scapula") Annotation( "https://fipat.library.dal.ca/ta2/") "A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Scapula") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "supraspinous fossa of scapula") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (sustentaculum tali of calcaneus) -AnnotationAssertion( "A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Calcaneus") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Calcaneus") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "sustentaculum tali of calcaneus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (temporal fossa of parietal bone) - -AnnotationAssertion( "A bone fossa forming a shallow concavity on the lateral surface of the parietal bone within the temporal region, bounded by the superior and inferior temporal lines. It constitutes the floor and posterior wall of the temporal fossa and provides the origin surface for the temporalis muscle.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Parietal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "temporal fossa of parietal bone") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tibial plateau of tibia) -AnnotationAssertion( "A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Tibia") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Tibia") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tibial plateau of tibia") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of eighth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of eighth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of eleventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of eleventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of fifth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of fifth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of first thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of first thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of fourth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of fourth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of ninth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of ninth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of second thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of second thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of seventh thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of seventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of sixth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of sixth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of tenth thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of tenth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse costal facet of third thoracic vertebra) -AnnotationAssertion( "A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse costal facet of third thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (transverse foramen of first cervical vertebra) - -AnnotationAssertion( "A bone foramen piercing the transverse process of the atlas (C1) and typically transmitting the vertebral artery, vertebral vein, and sympathetic plexus; it is characteristically large compared with lower cervical vertebrae, reflecting the broad transverse processes of the atlas.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "transverse foramen of first cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (transverse foramen of second cervical vertebra) - -AnnotationAssertion( "A bone foramen piercing the root of the transverse process of the axis (C2), transmitting the vertebral artery, vertebral vein, and accompanying sympathetic plexus on their ascent toward the foramen magnum; it is directed superolaterally.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "transverse foramen of second cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (transverse ridges of sternum) -AnnotationAssertion( "A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Sternum") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Sternum") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "transverse ridges of sternum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (trigeminal impression of petrous part of temporal bone) -AnnotationAssertion( "A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "trigeminal impression of petrous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (trochlear notch of ulna) - -AnnotationAssertion( "A bone foramen forming the large, concave articular surface on the anterior aspect of the proximal ulna, bounded by the olecranon posterosuperiorly and the coronoid process anteriorly, articulating with the trochlea of the humerus to form the hinge of the elbow joint.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Ulna") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "trochlear notch of ulna") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberosity of fifth distal phalanx of hand) -AnnotationAssertion( "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuberosity of fifth distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberosity of first distal phalanx of hand) -AnnotationAssertion( "A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuberosity of first distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberosity of fourth distal phalanx of hand) -AnnotationAssertion( "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuberosity of fourth distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberosity of second distal phalanx of hand) -AnnotationAssertion( "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuberosity of second distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tuberosity of third distal phalanx of hand) -AnnotationAssertion( "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Phalanx_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Phalanx_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tuberosity of third distal phalanx of hand") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (tympanic caniliculus of petrous part of temporal bone) -AnnotationAssertion( "A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tympanic caniliculus of petrous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra prominens of seventh cervical vertebra) -AnnotationAssertion( "A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebra prominens of seventh cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of eighth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of eighth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of eleventh thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of eleventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of fifth cervical vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of fifth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of fifth lumbar vertebra) -AnnotationAssertion( "A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of fifth lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of fifth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of fifth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of first lumbar vertebra) -AnnotationAssertion( "A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of first lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of first thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of first thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of fourth cervical vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of fourth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of fourth lumbar vertebra) -AnnotationAssertion( "A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of fourth lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of fourth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of fourth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of ninth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of ninth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of second cervical vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Axis_(anatomy)") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of second cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of second lumbar vertebra) -AnnotationAssertion( "A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of second lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of second thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of second thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of seventh cervical vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of seventh cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of seventh thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of seventh thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of sixth cervical vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of sixth cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of sixth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of sixth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of tenth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of tenth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of third cervical vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Cervical_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of third cervical vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of third lumbar vertebra) -AnnotationAssertion( "A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Lumbar_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of third lumbar vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of third thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of third thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebral arch of twelfth thoracic vertebra) -AnnotationAssertion( "A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Thoracic_vertebrae") Annotation( "https://fipat.library.dal.ca/ta2/") "A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vertebral arch of twelfth thoracic vertebra") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of eighth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior pillar of the eighth thoracic vertebra, bearing paired superior and inferior demi-facets on its posterolateral surface for articulation with the heads of ribs 8 and 9 respectively. Bodies progressively increase in size from T1 to T12 to accommodate increasing axial load, and T8 shows this gradual size increase.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of eighth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of eleventh thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior load-bearing column of the eleventh thoracic vertebra, bearing a single large complete costal facet on each side of its posterolateral surface for the head of rib 11. The facets are positioned more anteriorly than in typical thoracic vertebrae, reflecting the atypical nature of T11, which articulates with a floating rib.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of eleventh thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of fifth cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the cylindrical anterior block of the fifth cervical vertebra (C5), with slightly concave superior and inferior end-plates bearing uncinate processes on its superolateral margins; it articulates with the bodies of C4 and C6 via intervertebral discs.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of fifth cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of fifth lumbar vertebra) - -AnnotationAssertion( "A bony vertebral centrum of the fifth lumbar vertebra, the largest and most massive of all lumbar vertebral bodies, characteristically wedge-shaped with a greater anterior height than posterior height. This wedge form produces the lumbosacral angle and articulates inferiorly with the sacral base via the L5–S1 intervertebral disc, lacking costal facets and a transverse foramen.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of fifth lumbar vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of fifth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior load-bearing column of the fifth thoracic vertebra, bearing paired superior and inferior demi-facets on its posterolateral surface for costovertebral articulation. The superior demifacets share the articulation with the head of rib 5 with the inferior facets of T4, and the inferior demifacets contribute to articulation with rib 6.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of fifth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of first cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum representing the vestigial anterior ring element of the atlas (C1), which in humans is incorporated into the axis as the dens (odontoid process); the atlas therefore effectively lacks an independent vertebral body, and this structure is represented by the anterior arch.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of first cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of first lumbar vertebra) - -AnnotationAssertion( "A bony vertebral centrum of the first lumbar vertebra, presenting a large kidney-shaped cross-section that is the smallest of the five lumbar vertebral bodies. It lacks costal facets and a transverse foramen, bears flat intervertebral disc surfaces, and marks the superior end of the lumbar lordotic curve at the thoracolumbar junction.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of first lumbar vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of first thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior load-bearing column of the first thoracic vertebra, roughly heart-shaped in cross-section and similar in size to lower cervical vertebrae. It bears a complete costal facet on each side for the head of rib 1 and a superior demifacet for rib 2, and articulates superiorly with C7 and inferiorly with T2 through intervertebral discs.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of first thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of fourth cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the cylindrical anterior block of the fourth cervical vertebra (C4), with slightly concave superior and inferior end-plates bearing uncinate processes on its superolateral margins; it articulates with the bodies of C3 and C5 via intervertebral discs.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of fourth cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of fourth lumbar vertebra) - -AnnotationAssertion( "A bony vertebral centrum of the fourth lumbar vertebra, with a large kidney-shaped cross-section and flat endplates for intervertebral disc attachment. It lacks costal facets and a transverse foramen, and lies at the level of the intercrestal line used in clinical lumbar puncture orientation, contributing to the lower portion of the lumbar lordosis.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of fourth lumbar vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of fourth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior pillar of the fourth thoracic vertebra, bearing paired superior and inferior demi-facets on its posterolateral surfaces. The superior demifacets share articulation with the head of rib 4 with T3, and the inferior demifacets contribute to articulation with rib 5; the body is situated near the thoracic kyphotic apex.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of fourth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of ninth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior load-bearing column of the ninth thoracic vertebra, bearing paired superior and inferior demi-facets on its posterolateral surfaces. The superior demifacets articulate with the head of rib 9 shared with T8, and the inferior demifacets contribute to articulation with rib 10; T9 is transitional toward the atypical lower thoracic pattern.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of ninth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of second cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the compact cylindrical body of the axis (C2), from whose superior surface the dens (odontoid process) projects superiorly; it is broader transversely than typical cervical bodies and articulates inferiorly with C3 via an intervertebral disc.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of second cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of second lumbar vertebra) - -AnnotationAssertion( "A bony vertebral centrum of the second lumbar vertebra, with a kidney-shaped cross-section slightly larger than that of L1 and flat superior and inferior surfaces for intervertebral disc attachment. It lacks costal facets and a transverse foramen, and lies at approximately the level of the spinal cord terminus, contributing to the lumbar lordosis.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of second lumbar vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of second thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior pillar of the second thoracic vertebra, wider transversely than the first thoracic body and bearing paired superior and inferior demi-facets on its posterolateral surface. The superior demifacets share the articulation with the head of rib 2 with the inferior demifacets of T1, and the inferior demifacets contribute to articulation with rib 3.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of second thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of seventh cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the cylindrical anterior block of the seventh cervical vertebra (C7), larger than those of more superior cervical vertebrae and bearing uncinate processes on its superolateral margins; it articulates with C6 superiorly and with T1 inferiorly via intervertebral discs.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of seventh cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of seventh thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior load-bearing element of the seventh thoracic vertebra at the thoracic kyphotic apex, bearing paired superior and inferior demi-facets. The superior demifacets share articulation with the head of rib 7 with T6, and the inferior demifacets contribute to the costovertebral joint of rib 8; the body is the most posteriorly positioned of the thoracic column.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of seventh thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of sixth cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the cylindrical anterior block of the sixth cervical vertebra (C6), bearing uncinate processes on its superolateral margins; its anterior surface is associated with the carotid tubercle (Chassaignac's tubercle) of the transverse process and articulates with the bodies of C5 and C7 via intervertebral discs.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of sixth cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of sixth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior pillar of the sixth thoracic vertebra, near the apex of the thoracic kyphosis, bearing paired superior and inferior demi-facets on its posterolateral surface. The superior demifacets share articulation with the head of rib 6 with T5, and the inferior demifacets contribute to the costovertebral joint of rib 7.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of sixth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of tenth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior pillar of the tenth thoracic vertebra, typically bearing a single complete costal facet on each side of its posterolateral surface for the head of rib 10, rather than the paired demifacets of typical thoracic vertebrae. In variant anatomy the inferior demifacet may be absent or the facet may participate with T9.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of tenth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of third cervical vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the cylindrical anterior block of the third cervical vertebra (C3), with slightly concave superior and inferior end-plates bearing uncinate processes on its superolateral margins; it articulates with the bodies of C2 and C4 via intervertebral discs.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Cervical_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of third cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of third lumbar vertebra) - -AnnotationAssertion( "A bony vertebral centrum of the third lumbar vertebra, presenting the most symmetrically cylindrical body of the lumbar column with a broad kidney-shaped cross-section. It lacks costal facets and a transverse foramen, and occupies the apex of the lumbar lordotic curve, bearing the greatest rotational mobility of the lumbar region.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Lumbar_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of third lumbar vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of third thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior load-bearing element of the third thoracic vertebra, bearing paired superior and inferior demi-facets on the posterolateral aspects for the heads of ribs 3 and 4 respectively. It articulates with T2 above and T4 below through intervertebral discs, and its cross-sectional area is slightly larger than that of T2.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of third thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral body of twelfth thoracic vertebra) - -AnnotationAssertion( "A bony vertebral centrum forming the anterior pillar of the twelfth thoracic vertebra at the thoracolumbar junction, bearing a single complete costal facet on each side for the head of rib 12. The body is the largest of the thoracic vertebrae and transitional in morphology, resembling lumbar vertebrae in its proportions and increasing cross-sectional area.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral body of twelfth thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral foramen of first cervical vertebra) - -AnnotationAssertion( "A bone foramen forming the large, triangular central canal of the atlas (C1), bounded anteriorly by the anterior arch and posteriorly by the posterior arch; it is notably wider than in other cervical vertebrae, with approximately one-third occupied by the dens and one-third by the spinal cord.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Atlas_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral foramen of first cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral foramen of first thoracic vertebra) - -AnnotationAssertion( "A bone foramen enclosed by the vertebral body and neural arch of the first thoracic vertebra, forming the superior entrance of the thoracic spinal canal. It is relatively large compared to lower thoracic vertebrae, nearly triangular in outline, and transmits the spinal cord together with its meningeal coverings, spinal blood vessels, and the first thoracic nerve roots.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Thoracic_vertebrae") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral foramen of first thoracic vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (vertebral foramen of second cervical vertebra) - -AnnotationAssertion( "A bone foramen forming the triangular central canal of the axis (C2), bounded anteriorly by the vertebral body and posteriorly by the vertebral arch; it is large enough to accommodate the spinal cord while the dens projects superiorly through the atlas above.") -AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Axis_(anatomy)") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") -AnnotationAssertion( ) -AnnotationAssertion(rdfs:label "vertebral foramen of second cervical vertebra") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomatic process of squamous part of temporal bone) -AnnotationAssertion( "A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Temporal_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Temporal_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygomatic process of squamous part of temporal bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (zygomaticofacial foramen of zygomatic bone) -AnnotationAssertion( "A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek.") +AnnotationAssertion(Annotation( "ISBN:9780323393225") Annotation( "Wikipedia:Zygomatic_bone") Annotation( "https://fipat.library.dal.ca/ta2/") "A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek.") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "2026-03-19T00:00:00Z"^^xsd:dateTime) -AnnotationAssertion( "ISBN:9780323393225") -AnnotationAssertion( "Wikipedia:Zygomatic_bone") -AnnotationAssertion( "https://fipat.library.dal.ca/ta2/") AnnotationAssertion( ) AnnotationAssertion(rdfs:label "zygomaticofacial foramen of zygomatic bone") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) ) \ No newline at end of file diff --git a/src/ontology/diffs/uberon-diff.md b/src/ontology/diffs/uberon-diff.md index b196b4c7d..a16dbb707 100644 --- a/src/ontology/diffs/uberon-diff.md +++ b/src/ontology/diffs/uberon-diff.md @@ -2,13 +2,13 @@ ## Left - Ontology IRI: `http://purl.obolibrary.org/obo/uberon/uberon-base.owl` -- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2025-08-15/uberon-base.owl` -- Loaded from: `file:/nfs/production/parkinso/spot/ontology-releases/uberon/src/ontology/diffs/uberon-lastbuild.owl` +- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2025-12-04/uberon-base.owl` +- Loaded from: `file:/work/src/ontology/diffs/uberon-lastbuild.owl` ## Right - Ontology IRI: `http://purl.obolibrary.org/obo/uberon/uberon-base.owl` -- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2025-12-04/uberon-base.owl` -- Loaded from: `file:/nfs/production/parkinso/spot/ontology-releases/uberon/src/ontology/diffs/../../../uberon-base.owl` +- Version IRI: `http://purl.obolibrary.org/obo/uberon/releases/2026-04-01/uberon-base.owl` +- Loaded from: `file:/work/src/ontology/diffs/../../../uberon-base.owl` ### Ontology imports @@ -16,4188 +16,10966 @@ ### Ontology annotations #### Removed -- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2025-08-15" +- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2025-12-04" #### Added -- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2025-12-04" +- [IAO_0000700](http://purl.obolibrary.org/obo/IAO_0000700) [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) +- [IAO_0000700](http://purl.obolibrary.org/obo/IAO_0000700) [life cycle temporal boundary](http://purl.obolibrary.org/obo/UBERON_0035943) -### Barrington's nucleus `http://purl.obolibrary.org/obo/UBERON_0007632` -#### Removed -- [Barrington's nucleus](http://purl.obolibrary.org/obo/UBERON_0007632) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065835" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [versionInfo](http://www.w3.org/2002/07/owl#versionInfo) "2026-04-01" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### 1st arch mandibular mesenchyme `http://purl.obolibrary.org/obo/UBERON_0009584` +#### Removed +- [1st arch mandibular mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009584) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mandibular component](http://purl.obolibrary.org/obo/UBERON_0007237) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" #### Added -- [Barrington's nucleus](http://purl.obolibrary.org/obo/UBERON_0007632) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065835" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [1st arch mandibular mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009584) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mandibular component](http://purl.obolibrary.org/obo/UBERON_0007237) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - -### CA1 field of hippocampus `http://purl.obolibrary.org/obo/UBERON_0003881` +### 1st arch mandibular mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010339` #### Removed -- [CA1 field of hippocampus](http://purl.obolibrary.org/obo/UBERON_0003881) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056547" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [1st arch mandibular mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010339) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mandibular mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009584) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" #### Added -- [CA1 field of hippocampus](http://purl.obolibrary.org/obo/UBERON_0003881) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056547" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [1st arch mandibular mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010339) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mandibular mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009584) -### CA2 field of hippocampus `http://purl.obolibrary.org/obo/UBERON_0003882` +### 1st arch mandibular mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010252` #### Removed -- [CA2 field of hippocampus](http://purl.obolibrary.org/obo/UBERON_0003882) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056651" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [1st arch mandibular mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010252) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mandibular mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009584) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [1st arch mandibular mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010252) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mandibular mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009584) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [CA2 field of hippocampus](http://purl.obolibrary.org/obo/UBERON_0003882) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056651" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### 1st arch maxillary mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010338` +#### Removed +- [1st arch maxillary mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010338) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch maxillary mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010045) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [1st arch maxillary mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010338) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch maxillary mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010045) -### CA3 field of hippocampus `http://purl.obolibrary.org/obo/UBERON_0003883` +### 1st arch maxillary mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010253` #### Removed -- [CA3 field of hippocampus](http://purl.obolibrary.org/obo/UBERON_0003883) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056654" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [1st arch maxillary mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010253) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch maxillary mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010045) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [1st arch maxillary mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010253) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch maxillary mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010045) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [CA3 field of hippocampus](http://purl.obolibrary.org/obo/UBERON_0003883) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056654" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### 1st arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010341` +#### Removed +- [1st arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010341) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010042) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [1st arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010341) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [1st arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010042) -### S-shaped body `http://purl.obolibrary.org/obo/UBERON_0004199` +### 2 cell stage `http://purl.obolibrary.org/obo/UBERON_0007232` #### Removed -- [S-shaped body](http://purl.obolibrary.org/obo/UBERON_0004199) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0010896" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [2 cell stage](http://purl.obolibrary.org/obo/UBERON_0007232) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [S-shaped body](http://purl.obolibrary.org/obo/UBERON_0004199) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0010896" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### 2nd arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010343` +#### Removed +- [2nd arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010343) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [2nd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005689) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +#### Added +- [2nd arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010343) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [2nd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005689) -### abdominal oblique muscle `http://purl.obolibrary.org/obo/UBERON_0035032` +### 2nd arch mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010254` #### Removed -- [abdominal oblique muscle](http://purl.obolibrary.org/obo/UBERON_0035032) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071596" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [2nd arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010254) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [2nd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005689) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [2nd arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010254) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [2nd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005689) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [abdominal oblique muscle](http://purl.obolibrary.org/obo/UBERON_0035032) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071596" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### 3rd arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010344` +#### Removed +- [3rd arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010344) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [3rd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005690) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [3rd arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010344) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [3rd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005690) -### abducens nucleus `http://purl.obolibrary.org/obo/UBERON_0002682` +### 3rd arch mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010255` #### Removed -- [abducens nucleus](http://purl.obolibrary.org/obo/UBERON_0002682) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065827" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [3rd arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010255) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [3rd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005690) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [3rd arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010255) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [3rd arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005690) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [abducens nucleus](http://purl.obolibrary.org/obo/UBERON_0002682) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065827" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### 4 cell stage `http://purl.obolibrary.org/obo/UBERON_0007233` +#### Removed +- [4 cell stage](http://purl.obolibrary.org/obo/UBERON_0007233) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -### accessory navicular bone `http://purl.obolibrary.org/obo/UBERON_0010725` +### 4th arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010345` #### Removed -- [accessory navicular bone](http://purl.obolibrary.org/obo/UBERON_0010725) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:C536002" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [4th arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010345) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [4th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005691) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [4th arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010345) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [4th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005691) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [accessory navicular bone](http://purl.obolibrary.org/obo/UBERON_0010725) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:C536002" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### 4th arch mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010256` +#### Removed +- [4th arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010256) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [4th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005691) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [4th arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010256) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [4th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005691) -### adventitia `http://purl.obolibrary.org/obo/UBERON_0005742` +### 6th arch mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010347` #### Removed -- [adventitia](http://purl.obolibrary.org/obo/UBERON_0005742) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D063194" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [6th arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010347) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [6th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010031) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [6th arch mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010347) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [6th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010031) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [adventitia](http://purl.obolibrary.org/obo/UBERON_0005742) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D063194" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### 6th arch mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010257` +#### Removed +- [6th arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010257) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [6th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010031) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [6th arch mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010257) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [6th arch mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010031) -### ambergris `http://purl.obolibrary.org/obo/UBERON_0009757` +### 8 cell stage `http://purl.obolibrary.org/obo/UBERON_0007236` #### Removed -- [ambergris](http://purl.obolibrary.org/obo/UBERON_0009757) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D018648" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [8 cell stage](http://purl.obolibrary.org/obo/UBERON_0007236) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### BFO_0000001 `http://purl.obolibrary.org/obo/BFO_0000001` #### Added -- [ambergris](http://purl.obolibrary.org/obo/UBERON_0009757) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D018648" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [BFO_0000001](http://purl.obolibrary.org/obo/BFO_0000001) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### BFO_0000015 `http://purl.obolibrary.org/obo/BFO_0000015` -### anal canal `http://purl.obolibrary.org/obo/UBERON_0000159` -#### Removed -- [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001003" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +#### Added +- Class: [BFO_0000015](http://purl.obolibrary.org/obo/BFO_0000015) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### COB_0000021 `http://purl.obolibrary.org/obo/COB_0000021` #### Added -- [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001003" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [COB_0000021](http://purl.obolibrary.org/obo/COB_0000021) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### COB_0000022 `http://purl.obolibrary.org/obo/COB_0000022` + +#### Added +- Class: [COB_0000022](http://purl.obolibrary.org/obo/COB_0000022) -### anal fin `http://purl.obolibrary.org/obo/UBERON_4000163` -#### Removed -- [anal fin](http://purl.obolibrary.org/obo/UBERON_4000163) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004652" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### GCIs +#### Removed +- [trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0001645) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [NCBITaxon_9255](http://purl.obolibrary.org/obo/NCBITaxon_9255)) SubClassOf [RO_0002216](http://purl.obolibrary.org/obo/RO_0002216) some [GO_0050964](http://purl.obolibrary.org/obo/GO_0050964) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "PMID:22179203" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [monotreme bill](http://purl.obolibrary.org/obo/UBERON_0018133) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [NCBITaxon_9257](http://purl.obolibrary.org/obo/NCBITaxon_9257)) SubClassOf [RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050964](http://purl.obolibrary.org/obo/GO_0050964) #### Added -- [anal fin](http://purl.obolibrary.org/obo/UBERON_4000163) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004652" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [monotreme bill](http://purl.obolibrary.org/obo/UBERON_0018133) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [NCBITaxon_9257](http://purl.obolibrary.org/obo/NCBITaxon_9257)) SubClassOf [RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050956](http://purl.obolibrary.org/obo/GO_0050956) + - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### GO_0050956 `http://purl.obolibrary.org/obo/GO_0050956` + +#### Added +- Class: [GO_0050956](http://purl.obolibrary.org/obo/GO_0050956) -### anatomical group `http://purl.obolibrary.org/obo/UBERON_0000480` +### GO_0050964 `http://purl.obolibrary.org/obo/GO_0050964` #### Removed -- [anatomical group](http://purl.obolibrary.org/obo/UBERON_0000480) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002459" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- Class: [GO_0050964](http://purl.obolibrary.org/obo/GO_0050964) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### GO_0110165 `http://purl.obolibrary.org/obo/GO_0110165` #### Added -- [anatomical group](http://purl.obolibrary.org/obo/UBERON_0000480) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002459" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [GO_0110165](http://purl.obolibrary.org/obo/GO_0110165) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [GO_0110165](http://purl.obolibrary.org/obo/GO_0110165) DisjointWith [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) -### anatomical system `http://purl.obolibrary.org/obo/UBERON_0000467` +### acellular anatomical structure `http://purl.obolibrary.org/obo/UBERON_0000476` #### Removed -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002460" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [acellular anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000476) SubClassOf [anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000061) + +#### Added +- [acellular anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000476) SubClassOf [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### acromial process of scapula `http://purl.obolibrary.org/obo/UBERON_1200005` #### Added -- [anatomical system](http://purl.obolibrary.org/obo/UBERON_0000467) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002460" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### animal cap `http://purl.obolibrary.org/obo/UBERON_3010463` -#### Removed -- [animal cap](http://purl.obolibrary.org/obo/UBERON_3010463) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004724" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [animal cap](http://purl.obolibrary.org/obo/UBERON_3010463) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004724" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) [label](http://www.w3.org/2000/01/rdf-schema#label) "acromial process of scapula" -### annulus fibrosus `http://purl.obolibrary.org/obo/UBERON_0006444` -#### Removed -- [annulus fibrosus](http://purl.obolibrary.org/obo/UBERON_0006444) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000070616" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [acromial process of scapula](http://purl.obolibrary.org/obo/UBERON_1200005) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### added_by_HRA `http://purl.obolibrary.org/obo/uberon/core#added_by_HRA` #### Added -- [annulus fibrosus](http://purl.obolibrary.org/obo/UBERON_0006444) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000070616" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- AnnotationProperty: [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Classes tagged with this subset property were added on request from HuBMAP to support the HuBMAP Human Reference Atlas (HRA)." +- [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) SubPropertyOf: [SubsetProperty](http://www.geneontology.org/formats/oboInOwl#SubsetProperty) -### aortic body `http://purl.obolibrary.org/obo/UBERON_0034971` -#### Removed -- [aortic body](http://purl.obolibrary.org/obo/UBERON_0034971) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001016" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### alae of sacrum `http://purl.obolibrary.org/obo/UBERON_1200006` - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- Class: [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) -- [aortic body](http://purl.obolibrary.org/obo/UBERON_0034971) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006193" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [aortic body](http://purl.obolibrary.org/obo/UBERON_0034971) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001016" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" -- [aortic body](http://purl.obolibrary.org/obo/UBERON_0034971) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006193" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) [label](http://www.w3.org/2000/01/rdf-schema#label) "alae of sacrum" -### apocrine gland `http://purl.obolibrary.org/obo/UBERON_0008974` -#### Removed -- [apocrine gland](http://purl.obolibrary.org/obo/UBERON_0008974) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001050" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [alae of sacrum](http://purl.obolibrary.org/obo/UBERON_1200006) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### alveolar border of mandible `http://purl.obolibrary.org/obo/UBERON_1200007` #### Added -- [apocrine gland](http://purl.obolibrary.org/obo/UBERON_0008974) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001050" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### aponeurosis `http://purl.obolibrary.org/obo/UBERON_0006614` -#### Removed -- [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000070606" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" -#### Added -- [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000070606" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) [label](http://www.w3.org/2000/01/rdf-schema#label) "alveolar border of mandible" -### arm bone `http://purl.obolibrary.org/obo/UBERON_0003460` -#### Removed -- [arm bone](http://purl.obolibrary.org/obo/UBERON_0003460) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D050280" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [alveolar border of mandible](http://purl.obolibrary.org/obo/UBERON_1200007) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [arm bone](http://purl.obolibrary.org/obo/UBERON_0003460) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D050280" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### alveolar ridge of premaxilla `http://purl.obolibrary.org/obo/UBERON_0034898` +#### Removed +- [alveolar ridge of premaxilla](http://purl.obolibrary.org/obo/UBERON_0034898) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [premaxilla](http://purl.obolibrary.org/obo/UBERON_0002244) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "AAO" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [alveolar ridge of premaxilla](http://purl.obolibrary.org/obo/UBERON_0034898) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [premaxilla](http://purl.obolibrary.org/obo/UBERON_0002244) -### arterial blood `http://purl.obolibrary.org/obo/UBERON_0013755` +### alveolar sac `http://purl.obolibrary.org/obo/UBERON_0002169` #### Removed -- [arterial blood](http://purl.obolibrary.org/obo/UBERON_0013755) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006188" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [alveolar sac](http://purl.obolibrary.org/obo/UBERON_0002169) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [alveolar sac](http://purl.obolibrary.org/obo/UBERON_0002169) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary acinus](http://purl.obolibrary.org/obo/UBERON_0008874) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### anatomical entity `http://purl.obolibrary.org/obo/UBERON_0001062` #### Added -- [arterial blood](http://purl.obolibrary.org/obo/UBERON_0013755) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006188" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anatomical entity](http://purl.obolibrary.org/obo/UBERON_0001062) EquivalentTo [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) or [immaterial anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000466) + + +### anatomical surface region `http://purl.obolibrary.org/obo/UBERON_0036215` +#### Removed +- [anatomical surface region](http://purl.obolibrary.org/obo/UBERON_0036215) SubClassOf [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +#### Added +- [anatomical surface region](http://purl.obolibrary.org/obo/UBERON_0036215) SubClassOf [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) -### ascending colon `http://purl.obolibrary.org/obo/UBERON_0001156` +### antennal segment `http://purl.obolibrary.org/obo/UBERON_6000009` #### Removed -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044682" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [antennal segment](http://purl.obolibrary.org/obo/UBERON_6000009) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Segment anterior to the intercalary segment. In the adult it bears the antennae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [antennal segment](http://purl.obolibrary.org/obo/UBERON_6000009) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Segment anterior to the intercalary segment. In the adult it bears the antennae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### anterior arch of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200008` #### Added -- [ascending colon](http://purl.obolibrary.org/obo/UBERON_0001156) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044682" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### atlanto-occipital joint `http://purl.obolibrary.org/obo/UBERON_0000220` -#### Removed -- [atlanto-occipital joint](http://purl.obolibrary.org/obo/UBERON_0000220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001269" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [atlanto-occipital joint](http://purl.obolibrary.org/obo/UBERON_0000220) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001269" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) [label](http://www.w3.org/2000/01/rdf-schema#label) "anterior arch of first cervical vertebra" + +- [anterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200008) SubClassOf [arch of atlas](http://purl.obolibrary.org/obo/UBERON_0005814) -### autonomic nervous system `http://purl.obolibrary.org/obo/UBERON_0002410` -#### Removed -- [autonomic nervous system](http://purl.obolibrary.org/obo/UBERON_0002410) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002126" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### anterior clinoid process of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200009` #### Added -- [autonomic nervous system](http://purl.obolibrary.org/obo/UBERON_0002410) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002126" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### ball `http://purl.obolibrary.org/obo/UBERON_2000006` -#### Removed -- [ball](http://purl.obolibrary.org/obo/UBERON_2000006) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D015452" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [ball](http://purl.obolibrary.org/obo/UBERON_2000006) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D015452" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### basal forebrain `http://purl.obolibrary.org/obo/UBERON_0002743` -#### Removed -- [basal forebrain](http://purl.obolibrary.org/obo/UBERON_0002743) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066187" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) [label](http://www.w3.org/2000/01/rdf-schema#label) "anterior clinoid process of sphenoid bone" -#### Added -- [basal forebrain](http://purl.obolibrary.org/obo/UBERON_0002743) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066187" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200009) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) -### basal ganglion `http://purl.obolibrary.org/obo/UBERON_0002420` +### anterior gluteal line of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200010` #### Added -- [basal ganglion](http://purl.obolibrary.org/obo/UBERON_0002420) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- Class: [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) -- [basal ganglion](http://purl.obolibrary.org/obo/UBERON_0002420) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### basal nuclear complex `http://purl.obolibrary.org/obo/UBERON_0006098` -#### Removed -- [basal nuclear complex](http://purl.obolibrary.org/obo/UBERON_0006098) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001479" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [basal nuclear complex](http://purl.obolibrary.org/obo/UBERON_0006098) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001479" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### biliary tree `http://purl.obolibrary.org/obo/UBERON_0001173` -#### Removed -- [biliary tree](http://purl.obolibrary.org/obo/UBERON_0001173) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001659" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) [label](http://www.w3.org/2000/01/rdf-schema#label) "anterior gluteal line of ilium of os coxa" -#### Added -- [biliary tree](http://purl.obolibrary.org/obo/UBERON_0001173) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001659" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) +- [anterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200010) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) -### bivalve adductor muscle `http://purl.obolibrary.org/obo/UBERON_7770010` + +### anterior limiting lamina of cornea `http://purl.obolibrary.org/obo/UBERON_0004370` #### Added -- Class: [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) +- [anterior limiting lamina of cornea](http://purl.obolibrary.org/obo/UBERON_0004370) SubClassOf [anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000061) -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3605"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [contributor](http://purl.org/dc/terms/contributor) [0000-0003-3308-6245](https://orcid.org/0000-0003-3308-6245) +### anterior sacral foramina of sacrum `http://purl.obolibrary.org/obo/UBERON_1200011` -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [date](http://purl.org/dc/terms/date) "2025-09-11T12:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +#### Added +- Class: [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "dragon-ai-agent" +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "catch muscle" +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:7770010" +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The main muscular system in bivalve mollusks, responsible for closing the valves of the shell when contracting; bivalve mollusks generally have either one or two adductor muscles." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://en.wikipedia.org/wiki/Adductor_muscles_(bivalve)" +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:34425225" +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) [label](http://www.w3.org/2000/01/rdf-schema#label) "bivalve adductor muscle" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) SubClassOf [somatic muscle, invertebrate](http://purl.obolibrary.org/obo/UBERON_0014895) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [bivalve adductor muscle](http://purl.obolibrary.org/obo/UBERON_7770010) SubClassOf [RO_0002162](http://purl.obolibrary.org/obo/RO_0002162) some [NCBITaxon_6544](http://purl.obolibrary.org/obo/NCBITaxon_6544) +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) [label](http://www.w3.org/2000/01/rdf-schema#label) "anterior sacral foramina of sacrum" +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) -### blastodisc `http://purl.obolibrary.org/obo/UBERON_0004749` -#### Removed -- [blastodisc](http://purl.obolibrary.org/obo/UBERON_0004749) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054239" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [anterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200011) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### anterior tubercle of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200012` #### Added -- [blastodisc](http://purl.obolibrary.org/obo/UBERON_0004749) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054239" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### blood brain barrier `http://purl.obolibrary.org/obo/UBERON_0000120` -#### Removed -- [blood brain barrier](http://purl.obolibrary.org/obo/UBERON_0000120) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001812" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [blood brain barrier](http://purl.obolibrary.org/obo/UBERON_0000120) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001812" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) [label](http://www.w3.org/2000/01/rdf-schema#label) "anterior tubercle of first cervical vertebra" -### blood nerve barrier `http://purl.obolibrary.org/obo/UBERON_0003209` -#### Removed -- [blood nerve barrier](http://purl.obolibrary.org/obo/UBERON_0003209) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049428" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [anterior tubercle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200012) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### anterolateral tubercle of tibia `http://purl.obolibrary.org/obo/UBERON_1200013` #### Added -- [blood nerve barrier](http://purl.obolibrary.org/obo/UBERON_0003209) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049428" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### blood serum `http://purl.obolibrary.org/obo/UBERON_0001977` -#### Removed -- [blood serum](http://purl.obolibrary.org/obo/UBERON_0001977) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044967" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [blood serum](http://purl.obolibrary.org/obo/UBERON_0001977) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044967" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) [label](http://www.w3.org/2000/01/rdf-schema#label) "anterolateral tubercle of tibia" -### bronchial mucosa `http://purl.obolibrary.org/obo/UBERON_0000410` -#### Removed -- [bronchial mucosa](http://purl.obolibrary.org/obo/UBERON_0000410) SubClassOf [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) -#### Added -- [bronchial mucosa](http://purl.obolibrary.org/obo/UBERON_0000410) SubClassOf [respiratory system mucosa](http://purl.obolibrary.org/obo/UBERON_0004785) +- [anterolateral tubercle of tibia](http://purl.obolibrary.org/obo/UBERON_1200013) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) -### bronchiole `http://purl.obolibrary.org/obo/UBERON_0002186` +### appendage `http://purl.obolibrary.org/obo/UBERON_0000026` #### Removed -- [bronchiole](http://purl.obolibrary.org/obo/UBERON_0002186) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055745" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [appendage](http://purl.obolibrary.org/obo/UBERON_0000026) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Major subdivision of an organism that protrudes from the body[DOS, CARO]." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:DOS" + +#### Added +- [appendage](http://purl.obolibrary.org/obo/UBERON_0000026) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Major subdivision of an organism that protrudes from the body[DOS, CARO]." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### arcuate line of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200014` #### Added -- [bronchiole](http://purl.obolibrary.org/obo/UBERON_0002186) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055745" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### carapace `http://purl.obolibrary.org/obo/UBERON_0008275` -#### Removed -- [carapace](http://purl.obolibrary.org/obo/UBERON_0008275) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060105" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [carapace](http://purl.obolibrary.org/obo/UBERON_0008275) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060105" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### cardiac muscle tissue of interatrial septum `http://purl.obolibrary.org/obo/UBERON_0004491` + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" -#### Added -- [cardiac muscle tissue of interatrial septum](http://purl.obolibrary.org/obo/UBERON_0004491) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) [label](http://www.w3.org/2000/01/rdf-schema#label) "arcuate line of ilium of os coxa" -- [cardiac muscle tissue of interatrial septum](http://purl.obolibrary.org/obo/UBERON_0004491) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) +- [arcuate line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200014) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) -### carotid artery intima-media region `http://purl.obolibrary.org/obo/UBERON_1200002` + +### articular surface for cuboid bone of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200015` #### Added -- Class: [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) +- Class: [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3629"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [date](http://purl.org/dc/terms/date) "2025-11-14T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "dragon-ai-agent" +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:1200002" +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A region of the carotid artery wall composed of the tunica intima and tunica media." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:39416432" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "carotid intima-media" - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:39416432" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) [label](http://www.w3.org/2000/01/rdf-schema#label) "carotid artery intima-media region" +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) [label](http://www.w3.org/2000/01/rdf-schema#label) "articular surface for cuboid bone of calcaneus" -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) SubClassOf [multi-tissue structure](http://purl.obolibrary.org/obo/UBERON_0000481) +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [carotid artery segment](http://purl.obolibrary.org/obo/UBERON_0005396) +- [articular surface for cuboid bone of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200015) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) SubClassOf [BFO_0000051](http://purl.obolibrary.org/obo/BFO_0000051) some [tunica media](http://purl.obolibrary.org/obo/UBERON_0002522) -- [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) SubClassOf [BFO_0000051](http://purl.obolibrary.org/obo/BFO_0000051) some [tunica intima](http://purl.obolibrary.org/obo/UBERON_0002523) +### articular tubercle of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200016` +#### Added +- Class: [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) -### carotid body `http://purl.obolibrary.org/obo/UBERON_0001629` -#### Removed -- [carotid body](http://purl.obolibrary.org/obo/UBERON_0001629) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A small epithelioid structure consisting of a small cluster of chemoreceptive and supporting cells located near the bifurcation of the common carotid artery that serves as a chemoreceptive organ that senses the pH, carbon dioxide, and oxygen concentrations in the blood and plays a crucial role in their homeostatic control." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0003438" +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [carotid body](http://purl.obolibrary.org/obo/UBERON_0001629) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001530) +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [carotid body](http://purl.obolibrary.org/obo/UBERON_0001629) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3591"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [carotid body](http://purl.obolibrary.org/obo/UBERON_0001629) [date](http://purl.org/dc/terms/date) "2025-08-13T15:52:18Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [carotid body](http://purl.obolibrary.org/obo/UBERON_0001629) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bilateral sensory organ in the peripheral nervous system located in the adventitia of the bifurcation of the common carotid artery. The carotid body is a chemoreceptive organ that senses the pH, carbon dioxide, and oxygen concentrations in the blood and plays a crucial role in their homeostatic control." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MP:0003438" +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:32965908" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [carotid body](http://purl.obolibrary.org/obo/UBERON_0001629) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [peripheral nervous system](http://purl.obolibrary.org/obo/UBERON_0000010) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) [label](http://www.w3.org/2000/01/rdf-schema#label) "articular tubercle of squamous part of temporal bone" -### carpometacarpal joint `http://purl.obolibrary.org/obo/UBERON_0011119` -#### Removed -- [carpometacarpal joint](http://purl.obolibrary.org/obo/UBERON_0011119) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052737" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [articular tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200016) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### auricular surface of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200017` #### Added -- [carpometacarpal joint](http://purl.obolibrary.org/obo/UBERON_0011119) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052737" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### caudal fin `http://purl.obolibrary.org/obo/UBERON_4000164` -#### Removed -- [caudal fin](http://purl.obolibrary.org/obo/UBERON_4000164) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001827" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [caudal fin](http://purl.obolibrary.org/obo/UBERON_4000164) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001827" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) [label](http://www.w3.org/2000/01/rdf-schema#label) "auricular surface of ilium of os coxa" -### celiac ganglion `http://purl.obolibrary.org/obo/UBERON_0002262` -#### Removed -- [celiac ganglion](http://purl.obolibrary.org/obo/UBERON_0002262) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006296" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [auricular surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200017) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [celiac ganglion](http://purl.obolibrary.org/obo/UBERON_0002262) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006296" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### base of first distal phalanx of foot `http://purl.obolibrary.org/obo/UBERON_1200018` - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +#### Added +- Class: [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### central amygdaloid nucleus `http://purl.obolibrary.org/obo/UBERON_0002883` -#### Removed -- [central amygdaloid nucleus](http://purl.obolibrary.org/obo/UBERON_0002883) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066274" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [central amygdaloid nucleus](http://purl.obolibrary.org/obo/UBERON_0002883) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066274" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" -### cercaria `http://purl.obolibrary.org/obo/UBERON_0018388` -#### Removed -- [cercaria](http://purl.obolibrary.org/obo/UBERON_0018388) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D058487" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) [label](http://www.w3.org/2000/01/rdf-schema#label) "base of first distal phalanx of foot" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200018) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of pedal digit 1](http://purl.obolibrary.org/obo/UBERON_0004315) -#### Added -- [cercaria](http://purl.obolibrary.org/obo/UBERON_0018388) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D058487" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### base of first distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200019` +#### Added +- Class: [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) -### cerebellar vermis `http://purl.obolibrary.org/obo/UBERON_0004720` -#### Removed -- [cerebellar vermis](http://purl.obolibrary.org/obo/UBERON_0004720) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065814" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [cerebellar vermis](http://purl.obolibrary.org/obo/UBERON_0004720) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065814" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### cerebellum interpositus nucleus `http://purl.obolibrary.org/obo/UBERON_0004073` -#### Removed -- [cerebellum interpositus nucleus](http://purl.obolibrary.org/obo/UBERON_0004073) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12399" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) [label](http://www.w3.org/2000/01/rdf-schema#label) "base of first distal phalanx of hand" +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) -### cerebral crus `http://purl.obolibrary.org/obo/UBERON_0002631` -#### Removed -- [cerebral crus](http://purl.obolibrary.org/obo/UBERON_0002631) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065843" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200019) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 1](http://purl.obolibrary.org/obo/UBERON_0004337) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### base of first proximal phalanx of foot `http://purl.obolibrary.org/obo/UBERON_1200020` #### Added -- [cerebral crus](http://purl.obolibrary.org/obo/UBERON_0002631) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065843" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### cerebral nuclei `http://purl.obolibrary.org/obo/UBERON_8440012` -#### Removed -- [cerebral nuclei](http://purl.obolibrary.org/obo/UBERON_8440012) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006534" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [cerebral nuclei](http://purl.obolibrary.org/obo/UBERON_8440012) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006534" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) [label](http://www.w3.org/2000/01/rdf-schema#label) "base of first proximal phalanx of foot" -### cerebral peduncle `http://purl.obolibrary.org/obo/UBERON_0002623` -#### Removed -- [cerebral peduncle](http://purl.obolibrary.org/obo/UBERON_0002623) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065850" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first proximal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200020) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [proximal phalanx of pedal digit 1](http://purl.obolibrary.org/obo/UBERON_0004332) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [cerebral peduncle](http://purl.obolibrary.org/obo/UBERON_0002623) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065850" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### base of first proximal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200021` - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- Class: [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### cervical rib `http://purl.obolibrary.org/obo/UBERON_0018144` -#### Removed -- [cervical rib](http://purl.obolibrary.org/obo/UBERON_0018144) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D057070" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [cervical rib](http://purl.obolibrary.org/obo/UBERON_0018144) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D057070" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" -### cervical spinal cord `http://purl.obolibrary.org/obo/UBERON_0002726` -#### Removed -- [cervical spinal cord](http://purl.obolibrary.org/obo/UBERON_0002726) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066193" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) [label](http://www.w3.org/2000/01/rdf-schema#label) "base of first proximal phalanx of hand" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) -#### Added -- [cervical spinal cord](http://purl.obolibrary.org/obo/UBERON_0002726) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066193" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [base of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200021) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [proximal phalanx of manual digit 1](http://purl.obolibrary.org/obo/UBERON_0004338) -### cervical spinal cord ventral horn `http://purl.obolibrary.org/obo/UBERON_0014621` +### bile duct `http://purl.obolibrary.org/obo/UBERON_0002394` #### Removed -- [cervical spinal cord ventral horn](http://purl.obolibrary.org/obo/UBERON_0014621) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066151" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [bile duct](http://purl.obolibrary.org/obo/UBERON_0002394) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [biliary tree](http://purl.obolibrary.org/obo/UBERON_0001173) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" #### Added -- [cervical spinal cord ventral horn](http://purl.obolibrary.org/obo/UBERON_0014621) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066151" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [bile duct](http://purl.obolibrary.org/obo/UBERON_0002394) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [biliary tree](http://purl.obolibrary.org/obo/UBERON_0001173) -### chest wall `http://purl.obolibrary.org/obo/UBERON_0016435` +### blastodisc derived epiblast `http://purl.obolibrary.org/obo/UBERON_0008781` #### Removed -- [chest wall](http://purl.obolibrary.org/obo/UBERON_0016435) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D035441" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [blastodisc derived epiblast](http://purl.obolibrary.org/obo/UBERON_0008781) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [blastodisc](http://purl.obolibrary.org/obo/UBERON_0004749) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" #### Added -- [chest wall](http://purl.obolibrary.org/obo/UBERON_0016435) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D035441" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [blastodisc derived epiblast](http://purl.obolibrary.org/obo/UBERON_0008781) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [blastodisc](http://purl.obolibrary.org/obo/UBERON_0004749) -### chorioallantoic membrane `http://purl.obolibrary.org/obo/UBERON_0005335` +### blastula stage `http://purl.obolibrary.org/obo/UBERON_0000108` #### Removed -- [chorioallantoic membrane](http://purl.obolibrary.org/obo/UBERON_0005335) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049033" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [blastula stage](http://purl.obolibrary.org/obo/UBERON_0000108) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - -#### Added -- [chorioallantoic membrane](http://purl.obolibrary.org/obo/UBERON_0005335) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049033" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### body of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200022` +#### Added +- Class: [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) -### choroid plexus epithelium `http://purl.obolibrary.org/obo/UBERON_0003911` -#### Removed -- [choroid plexus epithelium](http://purl.obolibrary.org/obo/UBERON_0003911) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006008" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [choroid plexus epithelium](http://purl.obolibrary.org/obo/UBERON_0003911) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006008" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### cingulate gyrus `http://purl.obolibrary.org/obo/UBERON_0002967` -#### Removed -- [cingulate gyrus](http://purl.obolibrary.org/obo/UBERON_0002967) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D006179" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) [label](http://www.w3.org/2000/01/rdf-schema#label) "body of calcaneus" -#### Added -- [cingulate gyrus](http://purl.obolibrary.org/obo/UBERON_0002967) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D006179" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) +- [body of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200022) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) -### circulatory system `http://purl.obolibrary.org/obo/UBERON_0001009` -#### Removed -- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D002319" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### body of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200023` #### Added -- [circulatory system](http://purl.obolibrary.org/obo/UBERON_0001009) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D002319" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### circumventricular organ `http://purl.obolibrary.org/obo/UBERON_0005408` -#### Removed -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066280" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006267" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -#### Added -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066280" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) [label](http://www.w3.org/2000/01/rdf-schema#label) "body of second cervical vertebra" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) SubClassOf [bony vertebral centrum](http://purl.obolibrary.org/obo/UBERON_0001075) -- [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006267" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [body of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200023) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### body of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200024` -### compact bone tissue `http://purl.obolibrary.org/obo/UBERON_0001439` -#### Removed -- [compact bone tissue](http://purl.obolibrary.org/obo/UBERON_0001439) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071538" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- Class: [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -#### Added -- [compact bone tissue](http://purl.obolibrary.org/obo/UBERON_0001439) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071538" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### compound eye `http://purl.obolibrary.org/obo/UBERON_0000018` -#### Removed -- [compound eye](http://purl.obolibrary.org/obo/UBERON_0000018) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002421" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -#### Added -- [compound eye](http://purl.obolibrary.org/obo/UBERON_0000018) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0002421" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) [label](http://www.w3.org/2000/01/rdf-schema#label) "body of sphenoid bone" +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) -### coronary sinus `http://purl.obolibrary.org/obo/UBERON_0005438` -#### Removed -- [coronary sinus](http://purl.obolibrary.org/obo/UBERON_0005438) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054326" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [body of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200024) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### bone element `http://purl.obolibrary.org/obo/UBERON_0001474` +#### Removed +- [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) SubClassOf [RO_0002473](http://purl.obolibrary.org/obo/RO_0002473) some [bone tissue](http://purl.obolibrary.org/obo/UBERON_0002481) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VSAO-modified" #### Added -- [coronary sinus](http://purl.obolibrary.org/obo/UBERON_0005438) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054326" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) SubClassOf [RO_0002473](http://purl.obolibrary.org/obo/RO_0002473) some [bone tissue](http://purl.obolibrary.org/obo/UBERON_0002481) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### bone of craniocervical region `http://purl.obolibrary.org/obo/UBERON_0007914` +#### Removed +- [bone of craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007914) SubClassOf [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" -### coronary sinus valve `http://purl.obolibrary.org/obo/UBERON_0004150` +- [bone of craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007914) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" #### Added -- [coronary sinus valve](http://purl.obolibrary.org/obo/UBERON_0004150) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [bone of craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007914) SubClassOf [bone element](http://purl.obolibrary.org/obo/UBERON_0001474) -- [coronary sinus valve](http://purl.obolibrary.org/obo/UBERON_0004150) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [bone of craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007914) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) -### corpus cerebelli `http://purl.obolibrary.org/obo/UBERON_2000188` +### bony part of hard palate `http://purl.obolibrary.org/obo/UBERON_0012074` #### Removed -- [corpus cerebelli](http://purl.obolibrary.org/obo/UBERON_2000188) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D002531" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [bony part of hard palate](http://purl.obolibrary.org/obo/UBERON_0012074) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [hard palate](http://purl.obolibrary.org/obo/UBERON_0003216) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) - -#### Added -- [corpus cerebelli](http://purl.obolibrary.org/obo/UBERON_2000188) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D002531" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) -### cortical plate `http://purl.obolibrary.org/obo/UBERON_0005343` +### buccal epithelium `http://purl.obolibrary.org/obo/UBERON_0008420` #### Removed -- [cortical plate](http://purl.obolibrary.org/obo/UBERON_0005343) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D002540" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [buccal epithelium](http://purl.obolibrary.org/obo/UBERON_0008420) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [buccal mucosa](http://purl.obolibrary.org/obo/UBERON_0006956) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" #### Added -- [cortical plate](http://purl.obolibrary.org/obo/UBERON_0005343) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D002540" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) - +- [buccal epithelium](http://purl.obolibrary.org/obo/UBERON_0008420) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [buccal mucosa](http://purl.obolibrary.org/obo/UBERON_0006956) -### cortical subplate `http://purl.obolibrary.org/obo/UBERON_0004035` -#### Removed -- [cortical subplate](http://purl.obolibrary.org/obo/UBERON_0004035) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0011276" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### calcaneal sulcus of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200025` #### Added -- [cortical subplate](http://purl.obolibrary.org/obo/UBERON_0004035) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0011276" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### corticomedial nuclear complex `http://purl.obolibrary.org/obo/UBERON_0006108` -#### Removed -- [corticomedial nuclear complex](http://purl.obolibrary.org/obo/UBERON_0006108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066276" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" -#### Added -- [corticomedial nuclear complex](http://purl.obolibrary.org/obo/UBERON_0006108) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066276" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) [label](http://www.w3.org/2000/01/rdf-schema#label) "calcaneal sulcus of calcaneus" -### corticospinal tract `http://purl.obolibrary.org/obo/UBERON_0002707` -#### Removed -- [corticospinal tract](http://purl.obolibrary.org/obo/UBERON_0002707) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006132" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [calcaneal sulcus of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200025) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [corticospinal tract](http://purl.obolibrary.org/obo/UBERON_0002707) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006132" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### capsule of lens `http://purl.obolibrary.org/obo/UBERON_0001804` +#### Removed +- [capsule of lens](http://purl.obolibrary.org/obo/UBERON_0001804) SubClassOf [ectoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004121) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -### costal cartilage `http://purl.obolibrary.org/obo/UBERON_0002236` +### cardiac muscle tissue of myocardium `http://purl.obolibrary.org/obo/UBERON_0004493` #### Removed -- [costal cartilage](http://purl.obolibrary.org/obo/UBERON_0002236) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066186" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [cardiac muscle tissue of myocardium](http://purl.obolibrary.org/obo/UBERON_0004493) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" #### Added -- [costal cartilage](http://purl.obolibrary.org/obo/UBERON_0002236) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066186" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [cardiac muscle tissue of myocardium](http://purl.obolibrary.org/obo/UBERON_0004493) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [myocardium](http://purl.obolibrary.org/obo/UBERON_0002349) -### cranium `http://purl.obolibrary.org/obo/UBERON_0003128` +### cartilage element `http://purl.obolibrary.org/obo/UBERON_0007844` #### Removed -- [cranium](http://purl.obolibrary.org/obo/UBERON_0003128) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012886" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [cartilage element](http://purl.obolibrary.org/obo/UBERON_0007844) SubClassOf [skeletal element](http://purl.obolibrary.org/obo/UBERON_0004765) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VSAO" #### Added -- [cranium](http://purl.obolibrary.org/obo/UBERON_0003128) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012886" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [cartilage element](http://purl.obolibrary.org/obo/UBERON_0007844) SubClassOf [skeletal element](http://purl.obolibrary.org/obo/UBERON_0004765) -### deep circumflex iliac artery `http://purl.obolibrary.org/obo/UBERON_0009040` +### cartilaginous joint `http://purl.obolibrary.org/obo/UBERON_0002213` #### Removed -- [deep circumflex iliac artery](http://purl.obolibrary.org/obo/UBERON_0009040) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007083" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [cartilaginous joint](http://purl.obolibrary.org/obo/UBERON_0002213) SubClassOf [nonsynovial joint](http://purl.obolibrary.org/obo/UBERON_0011134) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [deep circumflex iliac artery](http://purl.obolibrary.org/obo/UBERON_0009040) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007083" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [cartilaginous joint](http://purl.obolibrary.org/obo/UBERON_0002213) SubClassOf [nonsynovial joint](http://purl.obolibrary.org/obo/UBERON_0011134) -### dental follicle `http://purl.obolibrary.org/obo/UBERON_0008969` +### caudal region of vertebral column `http://purl.obolibrary.org/obo/UBERON_0006076` #### Removed -- [dental follicle](http://purl.obolibrary.org/obo/UBERON_0008969) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D003795" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [caudal region of vertebral column](http://purl.obolibrary.org/obo/UBERON_0006076) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [caudal region](http://purl.obolibrary.org/obo/UBERON_0006071) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + + +### caudofemoralis brevis `http://purl.obolibrary.org/obo/UBERON_0035082` +#### Removed +- [caudofemoralis brevis](http://purl.obolibrary.org/obo/UBERON_0035082) SubClassOf [RO_0002371](http://purl.obolibrary.org/obo/RO_0002371) some [ilium](http://purl.obolibrary.org/obo/UBERON_0001273) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "fossa on lower edge of ilium" #### Added -- [dental follicle](http://purl.obolibrary.org/obo/UBERON_0008969) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D003795" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [caudofemoralis brevis](http://purl.obolibrary.org/obo/UBERON_0035082) SubClassOf [RO_0002371](http://purl.obolibrary.org/obo/RO_0002371) some [ilium](http://purl.obolibrary.org/obo/UBERON_0001273) -### dermatome `http://purl.obolibrary.org/obo/UBERON_0004016` +### central gray substance of medulla `http://purl.obolibrary.org/obo/UBERON_0002867` #### Removed -- [dermatome](http://purl.obolibrary.org/obo/UBERON_0004016) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006248" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [central gray substance of medulla](http://purl.obolibrary.org/obo/UBERON_0002867) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [medulla oblongata](http://purl.obolibrary.org/obo/UBERON_0001896) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [central gray substance of medulla](http://purl.obolibrary.org/obo/UBERON_0002867) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [medulla oblongata](http://purl.obolibrary.org/obo/UBERON_0001896) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### cervical division of cord spinal central canal `http://purl.obolibrary.org/obo/UBERON_0014542` +#### Removed +- [cervical division of cord spinal central canal](http://purl.obolibrary.org/obo/UBERON_0014542) SubClassOf [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "NIFSTD" #### Added -- [dermatome](http://purl.obolibrary.org/obo/UBERON_0004016) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006248" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [cervical division of cord spinal central canal](http://purl.obolibrary.org/obo/UBERON_0014542) SubClassOf [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) - -### descending colon `http://purl.obolibrary.org/obo/UBERON_0001158` +### chorion syncytiotrophoblast `http://purl.obolibrary.org/obo/UBERON_0003224` #### Removed -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044683" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [chorion syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0003224) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0000371) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "polar trophectoderm syncytiotrophoblast" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [chorion syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0003224) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [chorion membrane](http://purl.obolibrary.org/obo/UBERON_0003124) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" #### Added -- [descending colon](http://purl.obolibrary.org/obo/UBERON_0001158) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044683" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [chorion syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0003224) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [chorion membrane](http://purl.obolibrary.org/obo/UBERON_0003124) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [chorion syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0003224) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [syncytiotrophoblast](http://purl.obolibrary.org/obo/UBERON_0000371) -### diencephalon `http://purl.obolibrary.org/obo/UBERON_0001894` +### chorionic ectoderm `http://purl.obolibrary.org/obo/UBERON_0003374` +#### Removed +- [chorionic ectoderm](http://purl.obolibrary.org/obo/UBERON_0003374) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [ectoderm](http://purl.obolibrary.org/obo/UBERON_0000924) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ISBN:0073040584" #### Added -- [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [chorionic ectoderm](http://purl.obolibrary.org/obo/UBERON_0003374) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [ectoderm](http://purl.obolibrary.org/obo/UBERON_0000924) -- [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) - -### digestive tract `http://purl.obolibrary.org/obo/UBERON_0001555` +### ciliary epithelium `http://purl.obolibrary.org/obo/UBERON_0001778` #### Removed -- [digestive tract](http://purl.obolibrary.org/obo/UBERON_0001555) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D041981" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [ciliary epithelium](http://purl.obolibrary.org/obo/UBERON_0001778) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ciliary body](http://purl.obolibrary.org/obo/UBERON_0001775) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" #### Added -- [digestive tract](http://purl.obolibrary.org/obo/UBERON_0001555) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D041981" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [ciliary epithelium](http://purl.obolibrary.org/obo/UBERON_0001778) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ciliary body](http://purl.obolibrary.org/obo/UBERON_0001775) -### dorsal raphe nucleus `http://purl.obolibrary.org/obo/UBERON_0002043` +### ciliated columnar epithelium `http://purl.obolibrary.org/obo/UBERON_0007592` #### Removed -- [dorsal raphe nucleus](http://purl.obolibrary.org/obo/UBERON_0002043) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065847" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [ciliated columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007592) SubClassOf [simple columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0000485) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [dorsal raphe nucleus](http://purl.obolibrary.org/obo/UBERON_0002043) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065847" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [ciliated columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007592) SubClassOf [simple columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0000485) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - -### dorsal root ganglion `http://purl.obolibrary.org/obo/UBERON_0000044` +### ciliated columnar oviduct epithelium `http://purl.obolibrary.org/obo/UBERON_0007589` #### Removed -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005727" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [ciliated columnar oviduct epithelium](http://purl.obolibrary.org/obo/UBERON_0007589) SubClassOf [ciliated columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007592) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0000044) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005727" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [ciliated columnar oviduct epithelium](http://purl.obolibrary.org/obo/UBERON_0007589) SubClassOf [ciliated columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007592) -### dorsal striatum `http://purl.obolibrary.org/obo/UBERON_0005382` +### ciliated stratified columnar epithelium `http://purl.obolibrary.org/obo/UBERON_0007606` +#### Removed +- [ciliated stratified columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007606) SubClassOf [stratified columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007602) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [dorsal striatum](http://purl.obolibrary.org/obo/UBERON_0005382) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - -- [dorsal striatum](http://purl.obolibrary.org/obo/UBERON_0005382) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [ciliated stratified columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007606) SubClassOf [stratified columnar epithelium](http://purl.obolibrary.org/obo/UBERON_0007602) -### embryo `http://purl.obolibrary.org/obo/UBERON_0000922` +### cleavage stage `http://purl.obolibrary.org/obo/UBERON_0000107` #### Removed -- [embryo](http://purl.obolibrary.org/obo/UBERON_0000922) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000646" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [cleavage stage](http://purl.obolibrary.org/obo/UBERON_0000107) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### coccygeal cornu of coccyx `http://purl.obolibrary.org/obo/UBERON_1200026` #### Added -- [embryo](http://purl.obolibrary.org/obo/UBERON_0000922) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000646" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### embryoid body `http://purl.obolibrary.org/obo/UBERON_0014374` -#### Removed -- [embryoid body](http://purl.obolibrary.org/obo/UBERON_0014374) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D058732" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Coccyx" -#### Added -- [embryoid body](http://purl.obolibrary.org/obo/UBERON_0014374) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D058732" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) [label](http://www.w3.org/2000/01/rdf-schema#label) "coccygeal cornu of coccyx" -### endocardial cushion `http://purl.obolibrary.org/obo/UBERON_0002062` -#### Removed -- [endocardial cushion](http://purl.obolibrary.org/obo/UBERON_0002062) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054089" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [coccygeal cornu of coccyx](http://purl.obolibrary.org/obo/UBERON_1200026) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [coccyx](http://purl.obolibrary.org/obo/UBERON_0001350) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [endocardial cushion](http://purl.obolibrary.org/obo/UBERON_0002062) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054089" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### coccyx `http://purl.obolibrary.org/obo/UBERON_0001350` +#### Removed +- [coccyx](http://purl.obolibrary.org/obo/UBERON_0001350) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [bony pelvis](http://purl.obolibrary.org/obo/UBERON_0001270) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [coccyx](http://purl.obolibrary.org/obo/UBERON_0001350) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [bony pelvis](http://purl.obolibrary.org/obo/UBERON_0001270) -### endocrine pancreas `http://purl.obolibrary.org/obo/UBERON_0000016` +### copepodite stage `http://purl.obolibrary.org/obo/UBERON_0014860` #### Removed -- [endocrine pancreas](http://purl.obolibrary.org/obo/UBERON_0000016) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007515" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [copepodite stage](http://purl.obolibrary.org/obo/UBERON_0014860) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) -#### Added -- [endocrine pancreas](http://purl.obolibrary.org/obo/UBERON_0000016) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007515" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) -### endomysium `http://purl.obolibrary.org/obo/UBERON_0011895` +### copepodite stage 1 `http://purl.obolibrary.org/obo/UBERON_8200002` #### Removed -- [endomysium](http://purl.obolibrary.org/obo/UBERON_0011895) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006241" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [copepodite stage 1](http://purl.obolibrary.org/obo/UBERON_8200002) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [endomysium](http://purl.obolibrary.org/obo/UBERON_0011895) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006241" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### copepodite stage 2 `http://purl.obolibrary.org/obo/UBERON_8200003` +#### Removed +- [copepodite stage 2](http://purl.obolibrary.org/obo/UBERON_8200003) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -### epibranchial ganglion `http://purl.obolibrary.org/obo/UBERON_0009127` +### copepodite stage 3 `http://purl.obolibrary.org/obo/UBERON_8200004` #### Removed -- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006250" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [copepodite stage 3](http://purl.obolibrary.org/obo/UBERON_8200004) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006250" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### copepodite stage 4 `http://purl.obolibrary.org/obo/UBERON_8200005` +#### Removed +- [copepodite stage 4](http://purl.obolibrary.org/obo/UBERON_8200005) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -### epiglottic cartilage `http://purl.obolibrary.org/obo/UBERON_0001742` +### copepodite stage 5 `http://purl.obolibrary.org/obo/UBERON_8200006` #### Removed -- [epiglottic cartilage](http://purl.obolibrary.org/obo/UBERON_0001742) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D004825" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [copepodite stage 5](http://purl.obolibrary.org/obo/UBERON_8200006) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) - -#### Added -- [epiglottic cartilage](http://purl.obolibrary.org/obo/UBERON_0001742) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D004825" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) -### esophagus mucosa `http://purl.obolibrary.org/obo/UBERON_0002469` +### copepodite stage 6 `http://purl.obolibrary.org/obo/UBERON_8200007` #### Removed -- [esophagus mucosa](http://purl.obolibrary.org/obo/UBERON_0002469) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071041" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [copepodite stage 6](http://purl.obolibrary.org/obo/UBERON_8200007) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### coronoid fossa of humerus `http://purl.obolibrary.org/obo/UBERON_1200027` #### Added -- [esophagus mucosa](http://purl.obolibrary.org/obo/UBERON_0002469) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071041" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### excretory duct `http://purl.obolibrary.org/obo/UBERON_0035050` -#### Removed -- [excretory duct](http://purl.obolibrary.org/obo/UBERON_0035050) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006341" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [excretory duct](http://purl.obolibrary.org/obo/UBERON_0035050) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006341" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Humerus" +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) [label](http://www.w3.org/2000/01/rdf-schema#label) "coronoid fossa of humerus" -### excretory system `http://purl.obolibrary.org/obo/UBERON_8450002` -#### Removed -- [excretory system](http://purl.obolibrary.org/obo/UBERON_8450002) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006338" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [coronoid fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200027) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### costal groove of first rib `http://purl.obolibrary.org/obo/UBERON_1200028` #### Added -- [excretory system](http://purl.obolibrary.org/obo/UBERON_8450002) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006338" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### exocrine pancreas `http://purl.obolibrary.org/obo/UBERON_0000017` -#### Removed -- [exocrine pancreas](http://purl.obolibrary.org/obo/UBERON_0000017) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D046790" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -#### Added -- [exocrine pancreas](http://purl.obolibrary.org/obo/UBERON_0000017) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D046790" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) [label](http://www.w3.org/2000/01/rdf-schema#label) "costal groove of first rib" -### external ectoderm `http://purl.obolibrary.org/obo/UBERON_0000076` -#### Removed -- [external ectoderm](http://purl.obolibrary.org/obo/UBERON_0000076) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006242" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal groove of first rib](http://purl.obolibrary.org/obo/UBERON_1200028) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### costal groove of twelfth rib `http://purl.obolibrary.org/obo/UBERON_1200029` #### Added -- [external ectoderm](http://purl.obolibrary.org/obo/UBERON_0000076) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006242" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### extra-ocular muscle `http://purl.obolibrary.org/obo/UBERON_0001601` -#### Removed -- [extra-ocular muscle](http://purl.obolibrary.org/obo/UBERON_0001601) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009801" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [extra-ocular muscle](http://purl.obolibrary.org/obo/UBERON_0001601) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009801" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### extraembryonic membrane `http://purl.obolibrary.org/obo/UBERON_0005631` -#### Removed -- [extraembryonic membrane](http://purl.obolibrary.org/obo/UBERON_0005631) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005321" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) [label](http://www.w3.org/2000/01/rdf-schema#label) "costal groove of twelfth rib" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) -#### Added -- [extraembryonic membrane](http://purl.obolibrary.org/obo/UBERON_0005631) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005321" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [costal groove of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200029) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 12](http://purl.obolibrary.org/obo/UBERON_0004611) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### costal notches of sternum `http://purl.obolibrary.org/obo/UBERON_1200030` -### facial bone `http://purl.obolibrary.org/obo/UBERON_0003462` -#### Removed -- [facial bone](http://purl.obolibrary.org/obo/UBERON_0003462) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005147" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +#### Added +- Class: [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [facial bone](http://purl.obolibrary.org/obo/UBERON_0003462) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005147" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sternum" -### fibrocartilage `http://purl.obolibrary.org/obo/UBERON_0001995` -#### Removed -- [fibrocartilage](http://purl.obolibrary.org/obo/UBERON_0001995) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D051445" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) [label](http://www.w3.org/2000/01/rdf-schema#label) "costal notches of sternum" -#### Added -- [fibrocartilage](http://purl.obolibrary.org/obo/UBERON_0001995) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D051445" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [costal notches of sternum](http://purl.obolibrary.org/obo/UBERON_1200030) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) -### foramen magnum `http://purl.obolibrary.org/obo/UBERON_0003687` +### cranial synchondrosis `http://purl.obolibrary.org/obo/UBERON_0001725` #### Removed -- [foramen magnum](http://purl.obolibrary.org/obo/UBERON_0003687) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006035" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [cranial synchondrosis](http://purl.obolibrary.org/obo/UBERON_0001725) SubClassOf [synchondrosis](http://purl.obolibrary.org/obo/UBERON_0002215) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [foramen magnum](http://purl.obolibrary.org/obo/UBERON_0003687) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006035" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [cranial synchondrosis](http://purl.obolibrary.org/obo/UBERON_0001725) SubClassOf [synchondrosis](http://purl.obolibrary.org/obo/UBERON_0002215) -### fourth ventricle `http://purl.obolibrary.org/obo/UBERON_0002422` +### craniocervical region musculature `http://purl.obolibrary.org/obo/UBERON_0008229` #### Removed -- [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:10669" +- [craniocervical region musculature](http://purl.obolibrary.org/obo/UBERON_0008229) SubClassOf [musculature](http://purl.obolibrary.org/obo/UBERON_0001015) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +- [craniocervical region musculature](http://purl.obolibrary.org/obo/UBERON_0008229) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [craniocervical region musculature](http://purl.obolibrary.org/obo/UBERON_0008229) SubClassOf [musculature](http://purl.obolibrary.org/obo/UBERON_0001015) +- [craniocervical region musculature](http://purl.obolibrary.org/obo/UBERON_0008229) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [craniocervical region](http://purl.obolibrary.org/obo/UBERON_0007811) -### frontal cortex `http://purl.obolibrary.org/obo/UBERON_0001870` +### cricothyroid muscle `http://purl.obolibrary.org/obo/UBERON_0001566` #### Removed -- [frontal cortex](http://purl.obolibrary.org/obo/UBERON_0001870) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005625" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [cricothyroid muscle](http://purl.obolibrary.org/obo/UBERON_0001566) SubClassOf [RO_0002005](http://purl.obolibrary.org/obo/RO_0002005) some [vagus nerve](http://purl.obolibrary.org/obo/UBERON_0001759) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "dbpedia" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "external laryngeal branch of the vagus" #### Added -- [frontal cortex](http://purl.obolibrary.org/obo/UBERON_0001870) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005625" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [cricothyroid muscle](http://purl.obolibrary.org/obo/UBERON_0001566) SubClassOf [RO_0002005](http://purl.obolibrary.org/obo/RO_0002005) some [vagus nerve](http://purl.obolibrary.org/obo/UBERON_0001759) -### ganoine `http://purl.obolibrary.org/obo/UBERON_4000104` +### crista ampullaris neuroepithelium `http://purl.obolibrary.org/obo/UBERON_0006935` #### Removed -- [ganoine](http://purl.obolibrary.org/obo/UBERON_4000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:C067951" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [crista ampullaris neuroepithelium](http://purl.obolibrary.org/obo/UBERON_0006935) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [crista ampullaris](http://purl.obolibrary.org/obo/UBERON_0004721) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [crista ampullaris neuroepithelium](http://purl.obolibrary.org/obo/UBERON_0006935) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [crista ampullaris](http://purl.obolibrary.org/obo/UBERON_0004721) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### crista galla of ethmoid bone `http://purl.obolibrary.org/obo/UBERON_1200031` #### Added -- [ganoine](http://purl.obolibrary.org/obo/UBERON_4000104) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:C067951" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### gastroesophageal sphincter `http://purl.obolibrary.org/obo/UBERON_0004550` -#### Removed -- [gastroesophageal sphincter](http://purl.obolibrary.org/obo/UBERON_0004550) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049630" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [gastroesophageal sphincter](http://purl.obolibrary.org/obo/UBERON_0004550) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049630" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ethmoid_bone" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### gill raker `http://purl.obolibrary.org/obo/UBERON_2000356` -#### Removed -- [gill raker](http://purl.obolibrary.org/obo/UBERON_2000356) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002149" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) [label](http://www.w3.org/2000/01/rdf-schema#label) "crista galla of ethmoid bone" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) -#### Added -- [gill raker](http://purl.obolibrary.org/obo/UBERON_2000356) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002149" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [crista galla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200031) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ethmoid bone](http://purl.obolibrary.org/obo/UBERON_0001679) -### glenoid fossa `http://purl.obolibrary.org/obo/UBERON_0006657` +### crustacean post-larval stage `http://purl.obolibrary.org/obo/UBERON_0014858` #### Removed -- [glenoid fossa](http://purl.obolibrary.org/obo/UBERON_0006657) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D061165" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [crustacean post-larval stage](http://purl.obolibrary.org/obo/UBERON_0014858) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) -#### Added -- [glenoid fossa](http://purl.obolibrary.org/obo/UBERON_0006657) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D061165" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) -### glomerular basement membrane `http://purl.obolibrary.org/obo/UBERON_0005777` +### cysticercus stage `http://purl.obolibrary.org/obo/UBERON_0014856` #### Removed -- [glomerular basement membrane](http://purl.obolibrary.org/obo/UBERON_0005777) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D050533" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [cysticercus stage](http://purl.obolibrary.org/obo/UBERON_0014856) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [glomerular basement membrane](http://purl.obolibrary.org/obo/UBERON_0005777) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D050533" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### death stage `http://purl.obolibrary.org/obo/UBERON_0000071` +#### Removed +- [death stage](http://purl.obolibrary.org/obo/UBERON_0000071) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -### glymphatic system `http://purl.obolibrary.org/obo/UBERON_0036145` +### decussation of diencephalon `http://purl.obolibrary.org/obo/UBERON_0007425` #### Removed -- [glymphatic system](http://purl.obolibrary.org/obo/UBERON_0036145) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000077502" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [decussation of diencephalon](http://purl.obolibrary.org/obo/UBERON_0007425) SubClassOf [neural decussation](http://purl.obolibrary.org/obo/UBERON_0007418) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [decussation of diencephalon](http://purl.obolibrary.org/obo/UBERON_0007425) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Obol" #### Added -- [glymphatic system](http://purl.obolibrary.org/obo/UBERON_0036145) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000077502" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [decussation of diencephalon](http://purl.obolibrary.org/obo/UBERON_0007425) SubClassOf [neural decussation](http://purl.obolibrary.org/obo/UBERON_0007418) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [decussation of diencephalon](http://purl.obolibrary.org/obo/UBERON_0007425) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [diencephalon](http://purl.obolibrary.org/obo/UBERON_0001894) -### gravid organism `http://purl.obolibrary.org/obo/UBERON_0009097` +### dense irregular connective tissue `http://purl.obolibrary.org/obo/UBERON_0011822` #### Removed -- [gravid organism](http://purl.obolibrary.org/obo/UBERON_0009097) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000443" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [dense irregular connective tissue](http://purl.obolibrary.org/obo/UBERON_0011822) SubClassOf [irregular connective tissue](http://purl.obolibrary.org/obo/UBERON_0011821) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [gravid organism](http://purl.obolibrary.org/obo/UBERON_0009097) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000443" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [dense irregular connective tissue](http://purl.obolibrary.org/obo/UBERON_0011822) SubClassOf [irregular connective tissue](http://purl.obolibrary.org/obo/UBERON_0011821) -### gray matter `http://purl.obolibrary.org/obo/UBERON_0002020` +### dense regular connective tissue `http://purl.obolibrary.org/obo/UBERON_0007846` #### Removed -- [gray matter](http://purl.obolibrary.org/obo/UBERON_0002020) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066128" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [dense regular connective tissue](http://purl.obolibrary.org/obo/UBERON_0007846) SubClassOf [regular connective tissue](http://purl.obolibrary.org/obo/UBERON_0007845) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [dense regular connective tissue](http://purl.obolibrary.org/obo/UBERON_0007846) SubClassOf [regular connective tissue](http://purl.obolibrary.org/obo/UBERON_0007845) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### dentogingival junction `http://purl.obolibrary.org/obo/UBERON_8000014` #### Added -- [gray matter](http://purl.obolibrary.org/obo/UBERON_0002020) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066128" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3657"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "dentogingival complex" -### head kidney `http://purl.obolibrary.org/obo/UBERON_0007132` -#### Removed -- [head kidney](http://purl.obolibrary.org/obo/UBERON_0007132) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060226" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "gingival attachment" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "supracrestal tissue attachment" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8000014" -#### Added -- [head kidney](http://purl.obolibrary.org/obo/UBERON_0007132) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060226" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A multi-tissue anatomical complex that constitutes the attachment zone between the gingival tissue and the tooth surface, comprising the junctional epithelium, the supracrestal connective tissue attachment fibers, and supporting stromal and vascular elements. This structure seals the periodontal space from the oral cavity and serves as the primary physical and biological interface anchoring the free and attached gingiva to the tooth." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323096300" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:38876998" -### hepatic sinusoid of left lobe of liver `http://purl.obolibrary.org/obo/UBERON_0009548` -#### Removed -- [hepatic sinusoid of left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0009548) [label](http://www.w3.org/2000/01/rdf-schema#label) "hepatic sinusoid of left of lobe of liver" +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) [label](http://www.w3.org/2000/01/rdf-schema#label) "dentogingival junction" -#### Added -- [hepatic sinusoid of left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0009548) [label](http://www.w3.org/2000/01/rdf-schema#label) "hepatic sinusoid of left lobe of liver" +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) SubClassOf [anatomical junction](http://purl.obolibrary.org/obo/UBERON_0007651) + +- [dentogingival junction](http://purl.obolibrary.org/obo/UBERON_8000014) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [gingiva](http://purl.obolibrary.org/obo/UBERON_0001828) -### hepatic sinusoid of right lobe of liver `http://purl.obolibrary.org/obo/UBERON_0009549` +### dermal bone `http://purl.obolibrary.org/obo/UBERON_0008907` #### Removed -- [hepatic sinusoid of right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0009549) [label](http://www.w3.org/2000/01/rdf-schema#label) "hepatic sinusoid of right of lobe of liver" +- [dermal bone](http://purl.obolibrary.org/obo/UBERON_0008907) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [dermal skeleton](http://purl.obolibrary.org/obo/UBERON_0010364) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VSAO" #### Added -- [hepatic sinusoid of right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0009549) [label](http://www.w3.org/2000/01/rdf-schema#label) "hepatic sinusoid of right lobe of liver" +- [dermal bone](http://purl.obolibrary.org/obo/UBERON_0008907) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [dermal skeleton](http://purl.obolibrary.org/obo/UBERON_0010364) -### hepatopancreas `http://purl.obolibrary.org/obo/UBERON_0010264` +### developing anatomical structure `http://purl.obolibrary.org/obo/UBERON_0005423` #### Removed -- [hepatopancreas](http://purl.obolibrary.org/obo/UBERON_0010264) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D043143" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [developing anatomical structure](http://purl.obolibrary.org/obo/UBERON_0005423) SubClassOf [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) + +#### Added +- [developing anatomical structure](http://purl.obolibrary.org/obo/UBERON_0005423) SubClassOf [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### digastric fossa of mandible `http://purl.obolibrary.org/obo/UBERON_1200032` #### Added -- [hepatopancreas](http://purl.obolibrary.org/obo/UBERON_0010264) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D043143" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### hindlimb zeugopod `http://purl.obolibrary.org/obo/UBERON_0003823` -#### Removed -- [hindlimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0003823) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0010971" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" -#### Added -- [hindlimb zeugopod](http://purl.obolibrary.org/obo/UBERON_0003823) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0010971" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) [label](http://www.w3.org/2000/01/rdf-schema#label) "digastric fossa of mandible" -### honey `http://purl.obolibrary.org/obo/UBERON_0036016` -#### Removed -- [honey](http://purl.obolibrary.org/obo/UBERON_0036016) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D006722" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [digastric fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200032) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [honey](http://purl.obolibrary.org/obo/UBERON_0036016) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D006722" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### distal convoluted tubule macula densa `http://purl.obolibrary.org/obo/UBERON_0003546` +#### Removed +- [distal convoluted tubule macula densa](http://purl.obolibrary.org/obo/UBERON_0003546) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal convoluted tubule](http://purl.obolibrary.org/obo/UBERON_0001292) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [distal convoluted tubule macula densa](http://purl.obolibrary.org/obo/UBERON_0003546) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal convoluted tubule](http://purl.obolibrary.org/obo/UBERON_0001292) -### hypodermis `http://purl.obolibrary.org/obo/UBERON_0002072` +### distal straight tubule macula densa `http://purl.obolibrary.org/obo/UBERON_0005202` #### Removed -- [hypodermis](http://purl.obolibrary.org/obo/UBERON_0002072) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D040521" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [distal straight tubule macula densa](http://purl.obolibrary.org/obo/UBERON_0005202) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thick ascending limb of loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001291) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" #### Added -- [hypodermis](http://purl.obolibrary.org/obo/UBERON_0002072) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D040521" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [distal straight tubule macula densa](http://purl.obolibrary.org/obo/UBERON_0005202) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thick ascending limb of loop of Henle](http://purl.obolibrary.org/obo/UBERON_0001291) -### ileocecal fold `http://purl.obolibrary.org/obo/UBERON_1200000` +### distal tubular epithelium `http://purl.obolibrary.org/obo/UBERON_0008408` +#### Removed +- [distal tubular epithelium](http://purl.obolibrary.org/obo/UBERON_0008408) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal tubule](http://purl.obolibrary.org/obo/UBERON_0004135) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" #### Added -- Class: [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) +- [distal tubular epithelium](http://purl.obolibrary.org/obo/UBERON_0008408) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal tubule](http://purl.obolibrary.org/obo/UBERON_0004135) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3326"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-6601-2165](https://orcid.org/0000-0002-6601-2165) +### dorsum sellae of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200033` -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [date](http://purl.org/dc/terms/date) "2025-01-15T10:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +#### Added +- Class: [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "dragon-ai-agent" +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:16532" +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "ileocaecal fold" +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:1200000" +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://en.wikipedia.org/wiki/Ileocecal_fold" +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) [label](http://www.w3.org/2000/01/rdf-schema#label) "ileocecal fold" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [ileocecal fold](http://purl.obolibrary.org/obo/UBERON_1200000) SubClassOf [fold of peritoneum](http://purl.obolibrary.org/obo/UBERON_0034696) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) [label](http://www.w3.org/2000/01/rdf-schema#label) "dorsum sellae of sphenoid bone" -### ileocecal valve `http://purl.obolibrary.org/obo/UBERON_0000569` -#### Removed -- [ileocecal valve](http://purl.obolibrary.org/obo/UBERON_0000569) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007080" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [dorsum sellae of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200033) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [ileocecal valve](http://purl.obolibrary.org/obo/UBERON_0000569) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007080" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### duodenal gland `http://purl.obolibrary.org/obo/UBERON_0001212` +#### Removed +- [duodenal gland](http://purl.obolibrary.org/obo/UBERON_0001212) SubClassOf [submucosal gland](http://purl.obolibrary.org/obo/UBERON_0011148) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "compound tubular" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [duodenal gland](http://purl.obolibrary.org/obo/UBERON_0001212) SubClassOf [submucosal gland](http://purl.obolibrary.org/obo/UBERON_0011148) -### imaginal disc `http://purl.obolibrary.org/obo/UBERON_0000939` +### electroreceptor organ `http://purl.obolibrary.org/obo/UBERON_0010521` #### Removed -- [imaginal disc](http://purl.obolibrary.org/obo/UBERON_0000939) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060227" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [electroreceptor organ](http://purl.obolibrary.org/obo/UBERON_0010521) EquivalentTo [organ](http://purl.obolibrary.org/obo/UBERON_0000062) and ([RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050964](http://purl.obolibrary.org/obo/GO_0050964)) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [electroreceptor organ](http://purl.obolibrary.org/obo/UBERON_0010521) SubClassOf [sense organ](http://purl.obolibrary.org/obo/UBERON_0000020) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [electroreceptor organ](http://purl.obolibrary.org/obo/UBERON_0010521) SubClassOf [RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050964](http://purl.obolibrary.org/obo/GO_0050964) #### Added -- [imaginal disc](http://purl.obolibrary.org/obo/UBERON_0000939) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060227" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [electroreceptor organ](http://purl.obolibrary.org/obo/UBERON_0010521) EquivalentTo [organ](http://purl.obolibrary.org/obo/UBERON_0000062) and ([RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050956](http://purl.obolibrary.org/obo/GO_0050956)) + +- [electroreceptor organ](http://purl.obolibrary.org/obo/UBERON_0010521) SubClassOf [organ](http://purl.obolibrary.org/obo/UBERON_0000062) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [electroreceptor organ](http://purl.obolibrary.org/obo/UBERON_0010521) SubClassOf [RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050956](http://purl.obolibrary.org/obo/GO_0050956) -### inferior temporal gyrus `http://purl.obolibrary.org/obo/UBERON_0002751` +### embryo stage `http://purl.obolibrary.org/obo/UBERON_0000068` #### Removed -- [inferior temporal gyrus](http://purl.obolibrary.org/obo/UBERON_0002751) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006175" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [embryo stage](http://purl.obolibrary.org/obo/UBERON_0000068) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [inferior temporal gyrus](http://purl.obolibrary.org/obo/UBERON_0002751) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006175" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### enteric ganglion `http://purl.obolibrary.org/obo/UBERON_0001809` +#### Removed +- [enteric ganglion](http://purl.obolibrary.org/obo/UBERON_0001809) SubClassOf [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +#### Added +- [enteric ganglion](http://purl.obolibrary.org/obo/UBERON_0001809) SubClassOf [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) -### infratemporal fossa `http://purl.obolibrary.org/obo/UBERON_0013422` +### epibranchial ganglion `http://purl.obolibrary.org/obo/UBERON_0009127` #### Removed -- [infratemporal fossa](http://purl.obolibrary.org/obo/UBERON_0013422) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080884" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [epibranchial placode](http://purl.obolibrary.org/obo/UBERON_0003078) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "NCBIBook:NBK53175" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) SubClassOf [cranial ganglion](http://purl.obolibrary.org/obo/UBERON_0001714) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" #### Added -- [infratemporal fossa](http://purl.obolibrary.org/obo/UBERON_0013422) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080884" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) SubClassOf [cranial ganglion](http://purl.obolibrary.org/obo/UBERON_0001714) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [epibranchial ganglion](http://purl.obolibrary.org/obo/UBERON_0009127) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [epibranchial placode](http://purl.obolibrary.org/obo/UBERON_0003078) -### intercarpal joint `http://purl.obolibrary.org/obo/UBERON_0011132` +### epididymal lumen `http://purl.obolibrary.org/obo/UBERON_0035956` #### Removed -- [intercarpal joint](http://purl.obolibrary.org/obo/UBERON_0011132) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D050824" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [epididymal lumen](http://purl.obolibrary.org/obo/UBERON_0035956) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The lumen of the epididymis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:DOS" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://github.com/obophenotype/uberon/issues/1209" #### Added -- [intercarpal joint](http://purl.obolibrary.org/obo/UBERON_0011132) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D050824" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [epididymal lumen](http://purl.obolibrary.org/obo/UBERON_0035956) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The lumen of the epididymis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://github.com/obophenotype/uberon/issues/1209" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" -### internodal tract `http://purl.obolibrary.org/obo/UBERON_0009966` +### epithelium of anorectum `http://purl.obolibrary.org/obo/UBERON_8850001` #### Added -- [internodal tract](http://purl.obolibrary.org/obo/UBERON_0009966) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- Class: [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) -- [internodal tract](http://purl.obolibrary.org/obo/UBERON_0009966) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) [contributor](http://purl.org/dc/terms/contributor) [0009-0000-8480-9277](https://orcid.org/0009-0000-8480-9277) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) [date](http://purl.org/dc/terms/date) "2024-11-18T15:45:29Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### interpeduncular nucleus `http://purl.obolibrary.org/obo/UBERON_0002145` -#### Removed -- [interpeduncular nucleus](http://purl.obolibrary.org/obo/UBERON_0002145) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066268" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8850001" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The epithelium that lines the anorectum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:27042391" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "anorectal epithelium" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:27042391" -#### Added -- [interpeduncular nucleus](http://purl.obolibrary.org/obo/UBERON_0002145) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066268" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) [label](http://www.w3.org/2000/01/rdf-schema#label) "epithelium of anorectum" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) EquivalentTo [epithelium](http://purl.obolibrary.org/obo/UBERON_0000483) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [anorectum](http://purl.obolibrary.org/obo/UBERON_8410050)) +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) SubClassOf [epithelium of large intestine](http://purl.obolibrary.org/obo/UBERON_0001278) + +- [epithelium of anorectum](http://purl.obolibrary.org/obo/UBERON_8850001) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [anorectum](http://purl.obolibrary.org/obo/UBERON_8410050) -### jugal bone `http://purl.obolibrary.org/obo/UBERON_0001683` -#### Removed -- [jugal bone](http://purl.obolibrary.org/obo/UBERON_0001683) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D015050" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### epithelium of conjunctiva `http://purl.obolibrary.org/obo/UBERON_0006763` +#### Removed +- [epithelium of conjunctiva](http://purl.obolibrary.org/obo/UBERON_0006763) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" #### Added -- [jugal bone](http://purl.obolibrary.org/obo/UBERON_0001683) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D015050" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [epithelium of conjunctiva](http://purl.obolibrary.org/obo/UBERON_0006763) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) -### jugular foramen `http://purl.obolibrary.org/obo/UBERON_0005456` +### epithelium of laryngopharynx `http://purl.obolibrary.org/obo/UBERON_0009695` #### Removed -- [jugular foramen](http://purl.obolibrary.org/obo/UBERON_0005456) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080869" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [epithelium of laryngopharynx](http://purl.obolibrary.org/obo/UBERON_0009695) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [hypopharynx](http://purl.obolibrary.org/obo/UBERON_0001051) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" #### Added -- [jugular foramen](http://purl.obolibrary.org/obo/UBERON_0005456) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080869" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [epithelium of laryngopharynx](http://purl.obolibrary.org/obo/UBERON_0009695) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [hypopharynx](http://purl.obolibrary.org/obo/UBERON_0001051) -### kidney interpolar region `http://purl.obolibrary.org/obo/UBERON_7770009` +### epithelium of midgut `http://purl.obolibrary.org/obo/UBERON_0003352` +#### Removed +- [epithelium of midgut](http://purl.obolibrary.org/obo/UBERON_0003352) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [midgut](http://purl.obolibrary.org/obo/UBERON_0001045) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" #### Added -- Class: [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) +- [epithelium of midgut](http://purl.obolibrary.org/obo/UBERON_0003352) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [midgut](http://purl.obolibrary.org/obo/UBERON_0001045) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3604"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-3302-4610](https://orcid.org/0000-0002-3302-4610) +### ethmoidal air cells of ethmoid bone `http://purl.obolibrary.org/obo/UBERON_1200034` -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [date](http://purl.org/dc/terms/date) "2025-09-11T12:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +#### Added +- Class: [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "dragon-ai-agent" +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "central pole of kidney" +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "interpolar region of kidney" +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:7770009" +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The middle portion of the kidney situated between the upper pole and the lower pole, representing approximately the middle third of the kidney along its longitudinal axis." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Kidney" +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ethmoid_bone" -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) [label](http://www.w3.org/2000/01/rdf-schema#label) "kidney interpolar region" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) SubClassOf [organ part](http://purl.obolibrary.org/obo/UBERON_0000064) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [kidney interpolar region](http://purl.obolibrary.org/obo/UBERON_7770009) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113) +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) [label](http://www.w3.org/2000/01/rdf-schema#label) "ethmoidal air cells of ethmoid bone" +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) -### larva `http://purl.obolibrary.org/obo/UBERON_0002548` -#### Removed -- [larva](http://purl.obolibrary.org/obo/UBERON_0002548) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007814" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [ethmoidal air cells of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200034) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ethmoid bone](http://purl.obolibrary.org/obo/UBERON_0001679) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### ethmoidal bulla of ethmoid bone `http://purl.obolibrary.org/obo/UBERON_1200035` #### Added -- [larva](http://purl.obolibrary.org/obo/UBERON_0002548) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007814" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### lateral hypothalamic area `http://purl.obolibrary.org/obo/UBERON_0002430` -#### Removed -- [lateral hypothalamic area](http://purl.obolibrary.org/obo/UBERON_0002430) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006481" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ethmoid_bone" -#### Added -- [lateral hypothalamic area](http://purl.obolibrary.org/obo/UBERON_0002430) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006481" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) [label](http://www.w3.org/2000/01/rdf-schema#label) "ethmoidal bulla of ethmoid bone" -### lateral line system `http://purl.obolibrary.org/obo/UBERON_0002540` -#### Removed -- [lateral line system](http://purl.obolibrary.org/obo/UBERON_0002540) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D053403" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [ethmoidal bulla of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200035) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ethmoid bone](http://purl.obolibrary.org/obo/UBERON_0001679) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [lateral line system](http://purl.obolibrary.org/obo/UBERON_0002540) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D053403" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### exocrine gland of integumental system `http://purl.obolibrary.org/obo/UBERON_0019319` +#### Removed +- [exocrine gland of integumental system](http://purl.obolibrary.org/obo/UBERON_0019319) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An exocrine gland that is part of a integumental system." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dos" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" +#### Added +- [exocrine gland of integumental system](http://purl.obolibrary.org/obo/UBERON_0019319) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An exocrine gland that is part of a integumental system." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" -### lateral preoptic nucleus `http://purl.obolibrary.org/obo/UBERON_0001931` -#### Removed -- [lateral preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0001931) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006166" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### external auditory meatus of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200036` #### Added -- [lateral preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0001931) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006166" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### limb `http://purl.obolibrary.org/obo/UBERON_0002101` -#### Removed -- [limb](http://purl.obolibrary.org/obo/UBERON_0002101) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005121" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [limb](http://purl.obolibrary.org/obo/UBERON_0002101) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005121" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### limbic lobe `http://purl.obolibrary.org/obo/UBERON_0002600` -#### Removed -- [limbic lobe](http://purl.obolibrary.org/obo/UBERON_0002600) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065726" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) [label](http://www.w3.org/2000/01/rdf-schema#label) "external auditory meatus of squamous part of temporal bone" -#### Added -- [limbic lobe](http://purl.obolibrary.org/obo/UBERON_0002600) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065726" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [external auditory meatus of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200036) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) -### lymphatic vessel `http://purl.obolibrary.org/obo/UBERON_0001473` +### extraembryonic structure `http://purl.obolibrary.org/obo/UBERON_0000478` #### Removed -- [lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0001473) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D042601" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [extraembryonic structure](http://purl.obolibrary.org/obo/UBERON_0000478) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://cedar.bio.indiana.edu/trac/env/ontologies/ticket/279" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0001-9114-8737" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:DOS" #### Added -- [lymphatic vessel](http://purl.obolibrary.org/obo/UBERON_0001473) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D042601" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [extraembryonic structure](http://purl.obolibrary.org/obo/UBERON_0000478) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://cedar.bio.indiana.edu/trac/env/ontologies/ticket/279" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0001-9114-8737" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" -### main olfactory bulb `http://purl.obolibrary.org/obo/UBERON_0009951` +### extrinsic muscle of tongue `http://purl.obolibrary.org/obo/UBERON_0001575` #### Removed -- [main olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0009951) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009830" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [extrinsic muscle of tongue](http://purl.obolibrary.org/obo/UBERON_0001575) SubClassOf [RO_0002005](http://purl.obolibrary.org/obo/RO_0002005) some [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "check palatoglossus" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" #### Added -- [main olfactory bulb](http://purl.obolibrary.org/obo/UBERON_0009951) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009830" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [extrinsic muscle of tongue](http://purl.obolibrary.org/obo/UBERON_0001575) SubClassOf [RO_0002005](http://purl.obolibrary.org/obo/RO_0002005) some [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) -### manubrium `http://purl.obolibrary.org/obo/UBERON_2001553` +### eye epithelium `http://purl.obolibrary.org/obo/UBERON_0015808` #### Removed -- [manubrium](http://purl.obolibrary.org/obo/UBERON_2001553) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D008371" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [eye epithelium](http://purl.obolibrary.org/obo/UBERON_0015808) SubClassOf [pigment epithelium of eye](http://purl.obolibrary.org/obo/UBERON_0007625) + +#### Added +- [eye epithelium](http://purl.obolibrary.org/obo/UBERON_0015808) SubClassOf [sensory organ epithelium](http://purl.obolibrary.org/obo/UBERON_0019304) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### eye muscle `http://purl.obolibrary.org/obo/UBERON_0004277` +#### Removed +- [eye muscle](http://purl.obolibrary.org/obo/UBERON_0004277) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000019) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" #### Added -- [manubrium](http://purl.obolibrary.org/obo/UBERON_2001553) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D008371" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [eye muscle](http://purl.obolibrary.org/obo/UBERON_0004277) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [camera-type eye](http://purl.obolibrary.org/obo/UBERON_0000019) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### facet of eleventh rib `http://purl.obolibrary.org/obo/UBERON_1200038` -### mapping_provider `https://w3id.org/sssom/mapping_provider` -#### Removed -- AnnotationProperty: [mapping_provider](https://w3id.org/sssom/mapping_provider) +#### Added +- Class: [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### meconium `http://purl.obolibrary.org/obo/UBERON_0007109` -#### Removed -- [meconium](http://purl.obolibrary.org/obo/UBERON_0007109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D008470" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -#### Added -- [meconium](http://purl.obolibrary.org/obo/UBERON_0007109) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D008470" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) [label](http://www.w3.org/2000/01/rdf-schema#label) "facet of eleventh rib" -### medial preoptic nucleus `http://purl.obolibrary.org/obo/UBERON_0002035` -#### Removed -- [medial preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002035) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006167" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200038) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 11](http://purl.obolibrary.org/obo/UBERON_0004610) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### facet of first rib `http://purl.obolibrary.org/obo/UBERON_1200039` #### Added -- [medial preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002035) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006167" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### median preoptic nucleus `http://purl.obolibrary.org/obo/UBERON_0002625` -#### Removed -- [median preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002625) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006168" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -#### Added -- [median preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0002625) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006168" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) [label](http://www.w3.org/2000/01/rdf-schema#label) "facet of first rib" -### meniscus `http://purl.obolibrary.org/obo/UBERON_0000387` -#### Removed -- [meniscus](http://purl.obolibrary.org/obo/UBERON_0000387) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000072600" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of first rib](http://purl.obolibrary.org/obo/UBERON_1200039) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### facet of tenth rib `http://purl.obolibrary.org/obo/UBERON_1200040` #### Added -- [meniscus](http://purl.obolibrary.org/obo/UBERON_0000387) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000072600" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### mental foramen `http://purl.obolibrary.org/obo/UBERON_0006812` -#### Removed -- [mental foramen](http://purl.obolibrary.org/obo/UBERON_0006812) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080383" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -#### Added -- [mental foramen](http://purl.obolibrary.org/obo/UBERON_0006812) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080383" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) [label](http://www.w3.org/2000/01/rdf-schema#label) "facet of tenth rib" -### mesonephric duct `http://purl.obolibrary.org/obo/UBERON_0003074` -#### Removed -- [mesonephric duct](http://purl.obolibrary.org/obo/UBERON_0003074) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005990" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200040) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 10](http://purl.obolibrary.org/obo/UBERON_0004609) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [mesonephric duct](http://purl.obolibrary.org/obo/UBERON_0003074) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005990" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### facet of twelfth rib `http://purl.obolibrary.org/obo/UBERON_1200041` - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +#### Added +- Class: [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### metathalamus `http://purl.obolibrary.org/obo/UBERON_0002704` -#### Removed -- [metathalamus](http://purl.obolibrary.org/obo/UBERON_0002704) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005829" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [metathalamus](http://purl.obolibrary.org/obo/UBERON_0002704) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005829" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -### midbrain raphe nuclei `http://purl.obolibrary.org/obo/UBERON_0007412` -#### Removed -- [midbrain raphe nuclei](http://purl.obolibrary.org/obo/UBERON_0007412) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066267" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) [label](http://www.w3.org/2000/01/rdf-schema#label) "facet of twelfth rib" -#### Added -- [midbrain raphe nuclei](http://purl.obolibrary.org/obo/UBERON_0007412) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066267" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facet of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200041) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 12](http://purl.obolibrary.org/obo/UBERON_0004611) -### midbrain reticular formation `http://purl.obolibrary.org/obo/UBERON_0002639` +### facial bone `http://purl.obolibrary.org/obo/UBERON_0003462` #### Removed -- [midbrain reticular formation](http://purl.obolibrary.org/obo/UBERON_0002639) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066265" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facial bone](http://purl.obolibrary.org/obo/UBERON_0003462) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [facial skeleton](http://purl.obolibrary.org/obo/UBERON_0011156) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [facial bone](http://purl.obolibrary.org/obo/UBERON_0003462) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [facial skeleton](http://purl.obolibrary.org/obo/UBERON_0011156) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### facial crest `http://purl.obolibrary.org/obo/UBERON_7500131` #### Added -- [midbrain reticular formation](http://purl.obolibrary.org/obo/UBERON_0002639) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066265" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) [IAO_0000232](http://purl.obolibrary.org/obo/IAO_0000232) "very prominent in ruminants and equids; short in carnivorans and pigs: https://www.imaios.com/en/vet-anatomy/anatomical-structures/facial-crest-11073890400#" +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0003-2699-3066" -### midbrain tegmentum `http://purl.obolibrary.org/obo/UBERON_0001943` -#### Removed -- [midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0001943) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013681" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "crista facialis" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:7500131" -#### Added -- [midbrain tegmentum](http://purl.obolibrary.org/obo/UBERON_0001943) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013681" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A ridge or similar projection on the lateral side of the cranium that crosses the zygomatic bone and extends to the maxilla and ends on the facial tubercle (tuber faciale)." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0001-8415-4848" +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) [label](http://www.w3.org/2000/01/rdf-schema#label) "facial crest" -### middle cerebellar peduncle `http://purl.obolibrary.org/obo/UBERON_0002152` -#### Removed -- [middle cerebellar peduncle](http://purl.obolibrary.org/obo/UBERON_0002152) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065837" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxilla](http://purl.obolibrary.org/obo/UBERON_0002397) -#### Added -- [middle cerebellar peduncle](http://purl.obolibrary.org/obo/UBERON_0002152) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065837" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facial crest](http://purl.obolibrary.org/obo/UBERON_7500131) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal process of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_0004654) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### facial tubercle `http://purl.obolibrary.org/obo/UBERON_8500005` -### middle temporal gyrus `http://purl.obolibrary.org/obo/UBERON_0002771` -#### Removed -- [middle temporal gyrus](http://purl.obolibrary.org/obo/UBERON_0002771) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006176" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- Class: [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) [IAO_0000232](http://purl.obolibrary.org/obo/IAO_0000232) "it is well developed in equids; it is above the first molar tooth in ruminants; it is above the second molar tooth in sheep" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-8415-4848](https://orcid.org/0000-0001-8415-4848) -#### Added -- [middle temporal gyrus](http://purl.obolibrary.org/obo/UBERON_0002771) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006176" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "tuber faciale" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8500005" +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The facial tuberosity (tuber faciale) is a prominence located on the facial surface of the maxilla; it finishes the facial crest and varies much according to the species." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://www.imaios.com/en/vet-anatomy/anatomical-structure/facial-tuberosity-11073890408" -### midline nuclear group `http://purl.obolibrary.org/obo/UBERON_0002705` -#### Removed -- [midline nuclear group](http://purl.obolibrary.org/obo/UBERON_0002705) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D020644" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) [label](http://www.w3.org/2000/01/rdf-schema#label) "facial tubercle" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) EquivalentTo [tubercle](http://purl.obolibrary.org/obo/UBERON_0005813) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxilla](http://purl.obolibrary.org/obo/UBERON_0002397)) -#### Added -- [midline nuclear group](http://purl.obolibrary.org/obo/UBERON_0002705) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D020644" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) SubClassOf [tubercle](http://purl.obolibrary.org/obo/UBERON_0005813) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) -### mole `http://purl.obolibrary.org/obo/UBERON_1000010` -#### Removed -- [mole](http://purl.obolibrary.org/obo/UBERON_1000010) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009506" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [facial tubercle](http://purl.obolibrary.org/obo/UBERON_8500005) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxilla](http://purl.obolibrary.org/obo/UBERON_0002397) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### fibular facet of tibia `http://purl.obolibrary.org/obo/UBERON_1200042` #### Added -- [mole](http://purl.obolibrary.org/obo/UBERON_1000010) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009506" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### motor nucleus of trigeminal nerve `http://purl.obolibrary.org/obo/UBERON_0002633` -#### Removed -- [motor nucleus of trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0002633) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066266" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [motor nucleus of trigeminal nerve](http://purl.obolibrary.org/obo/UBERON_0002633) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066266" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### mouth floor `http://purl.obolibrary.org/obo/UBERON_0003679` -#### Removed -- [mouth floor](http://purl.obolibrary.org/obo/UBERON_0003679) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006184" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) [label](http://www.w3.org/2000/01/rdf-schema#label) "fibular facet of tibia" -#### Added -- [mouth floor](http://purl.obolibrary.org/obo/UBERON_0003679) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006184" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [fibular facet of tibia](http://purl.obolibrary.org/obo/UBERON_1200042) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) -### mucosa of bronchiole `http://purl.obolibrary.org/obo/UBERON_0005039` -#### Removed -- [mucosa of bronchiole](http://purl.obolibrary.org/obo/UBERON_0005039) SubClassOf [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) +### fibular notch of tibia `http://purl.obolibrary.org/obo/UBERON_1200043` #### Added -- [mucosa of bronchiole](http://purl.obolibrary.org/obo/UBERON_0005039) SubClassOf [respiratory system mucosa](http://purl.obolibrary.org/obo/UBERON_0004785) - +- Class: [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) -### mucosa of larynx `http://purl.obolibrary.org/obo/UBERON_0001824` -#### Removed -- [mucosa of larynx](http://purl.obolibrary.org/obo/UBERON_0001824) SubClassOf [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -#### Added -- [mucosa of larynx](http://purl.obolibrary.org/obo/UBERON_0001824) SubClassOf [respiratory system mucosa](http://purl.obolibrary.org/obo/UBERON_0004785) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### mucosa of nasopharynx `http://purl.obolibrary.org/obo/UBERON_0005022` -#### Removed -- [mucosa of nasopharynx](http://purl.obolibrary.org/obo/UBERON_0005022) SubClassOf [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### myelencephalon `http://purl.obolibrary.org/obo/UBERON_0005290` -#### Removed -- [myelencephalon](http://purl.obolibrary.org/obo/UBERON_0005290) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054024" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) [label](http://www.w3.org/2000/01/rdf-schema#label) "fibular notch of tibia" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) -#### Added -- [myelencephalon](http://purl.obolibrary.org/obo/UBERON_0005290) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054024" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [fibular notch of tibia](http://purl.obolibrary.org/obo/UBERON_1200043) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### fibular trochlea of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200044` -### nacre `http://purl.obolibrary.org/obo/UBERON_0008269` -#### Removed -- [nacre](http://purl.obolibrary.org/obo/UBERON_0008269) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060734" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +#### Added +- Class: [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [nacre](http://purl.obolibrary.org/obo/UBERON_0008269) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060734" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" -### nasal cartilage `http://purl.obolibrary.org/obo/UBERON_0001823` -#### Removed -- [nasal cartilage](http://purl.obolibrary.org/obo/UBERON_0001823) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055171" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) [label](http://www.w3.org/2000/01/rdf-schema#label) "fibular trochlea of calcaneus" -#### Added -- [nasal cartilage](http://purl.obolibrary.org/obo/UBERON_0001823) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055171" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fibular trochlea of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200044) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) -### nasal cavity mucosa `http://purl.obolibrary.org/obo/UBERON_0001826` -#### Removed -- [nasal cavity mucosa](http://purl.obolibrary.org/obo/UBERON_0001826) SubClassOf [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) +### foramen ovale of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200045` #### Added -- [nasal cavity mucosa](http://purl.obolibrary.org/obo/UBERON_0001826) SubClassOf [respiratory system mucosa](http://purl.obolibrary.org/obo/UBERON_0004785) +- Class: [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### neural plate `http://purl.obolibrary.org/obo/UBERON_0003075` -#### Removed -- [neural plate](http://purl.obolibrary.org/obo/UBERON_0003075) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054258" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [neural plate](http://purl.obolibrary.org/obo/UBERON_0003075) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054258" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" -### neural tube `http://purl.obolibrary.org/obo/UBERON_0001049` -#### Removed -- [neural tube](http://purl.obolibrary.org/obo/UBERON_0001049) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054259" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) [label](http://www.w3.org/2000/01/rdf-schema#label) "foramen ovale of sphenoid bone" + +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) SubClassOf [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) + +- [foramen ovale of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200045) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### fossa for lacrimal sac of lacrimal bone `http://purl.obolibrary.org/obo/UBERON_1200046` #### Added -- [neural tube](http://purl.obolibrary.org/obo/UBERON_0001049) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054259" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### neuromast `http://purl.obolibrary.org/obo/UBERON_0008904` -#### Removed -- [neuromast](http://purl.obolibrary.org/obo/UBERON_0008904) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006219" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [neuromast](http://purl.obolibrary.org/obo/UBERON_0008904) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006219" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lacrimal_bone" +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) [label](http://www.w3.org/2000/01/rdf-schema#label) "fossa for lacrimal sac of lacrimal bone" -### nucleus pulposus `http://purl.obolibrary.org/obo/UBERON_0002242` -#### Removed -- [nucleus pulposus](http://purl.obolibrary.org/obo/UBERON_0002242) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000070614" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) SubClassOf [preorbital fossa](http://purl.obolibrary.org/obo/UBERON_7500103) + +- [fossa for lacrimal sac of lacrimal bone](http://purl.obolibrary.org/obo/UBERON_1200046) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lacrimal bone](http://purl.obolibrary.org/obo/UBERON_0001680) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### frontal crest of frontal bone `http://purl.obolibrary.org/obo/UBERON_1200047` #### Added -- [nucleus pulposus](http://purl.obolibrary.org/obo/UBERON_0002242) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000070614" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### nucleus raphe magnus `http://purl.obolibrary.org/obo/UBERON_0002156` -#### Removed -- [nucleus raphe magnus](http://purl.obolibrary.org/obo/UBERON_0002156) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065846" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Frontal_bone" -#### Added -- [nucleus raphe magnus](http://purl.obolibrary.org/obo/UBERON_0002156) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065846" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) [label](http://www.w3.org/2000/01/rdf-schema#label) "frontal crest of frontal bone" -### nucleus raphe obscurus `http://purl.obolibrary.org/obo/UBERON_0002684` -#### Removed -- [nucleus raphe obscurus](http://purl.obolibrary.org/obo/UBERON_0002684) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065849" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [frontal crest of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200047) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) -#### Added -- [nucleus raphe obscurus](http://purl.obolibrary.org/obo/UBERON_0002684) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065849" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### fully formed stage `http://purl.obolibrary.org/obo/UBERON_0000066` +#### Removed +- [fully formed stage](http://purl.obolibrary.org/obo/UBERON_0000066) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + -### nucleus raphe pallidus `http://purl.obolibrary.org/obo/UBERON_0002157` +### fused sacrum `http://purl.obolibrary.org/obo/UBERON_0003690` #### Removed -- [nucleus raphe pallidus](http://purl.obolibrary.org/obo/UBERON_0002157) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065848" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [bony pelvis](http://purl.obolibrary.org/obo/UBERON_0001270) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [bony pelvis](http://purl.obolibrary.org/obo/UBERON_0001270) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [nucleus raphe pallidus](http://purl.obolibrary.org/obo/UBERON_0002157) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065848" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### future glans clitoris `http://purl.obolibrary.org/obo/UBERON_0013240` +#### Removed +- [future glans clitoris](http://purl.obolibrary.org/obo/UBERON_0013240) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [female genital tubercle](http://purl.obolibrary.org/obo/UBERON_0006233) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [future glans clitoris](http://purl.obolibrary.org/obo/UBERON_0013240) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [female genital tubercle](http://purl.obolibrary.org/obo/UBERON_0006233) -### occipital region `http://purl.obolibrary.org/obo/UBERON_0005902` +### future glans penis `http://purl.obolibrary.org/obo/UBERON_0013239` #### Removed -- [occipital region](http://purl.obolibrary.org/obo/UBERON_0005902) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009778" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [future glans penis](http://purl.obolibrary.org/obo/UBERON_0013239) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male genital tubercle](http://purl.obolibrary.org/obo/UBERON_0006261) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" #### Added -- [occipital region](http://purl.obolibrary.org/obo/UBERON_0005902) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009778" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [future glans penis](http://purl.obolibrary.org/obo/UBERON_0013239) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male genital tubercle](http://purl.obolibrary.org/obo/UBERON_0006261) -### occlusal surface of tooth `http://purl.obolibrary.org/obo/UBERON_8600149` +### future tongue `http://purl.obolibrary.org/obo/UBERON_0010056` +#### Removed +- [future tongue](http://purl.obolibrary.org/obo/UBERON_0010056) SubClassOf [compound organ](http://purl.obolibrary.org/obo/UBERON_0003103) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" #### Added -- Class: [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) +- [future tongue](http://purl.obolibrary.org/obo/UBERON_0010056) SubClassOf [compound organ](http://purl.obolibrary.org/obo/UBERON_0003103) -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-9625-1899](https://orcid.org/0000-0001-9625-1899) -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [contributor](http://purl.org/dc/terms/contributor) [0009-0002-7282-0836](https://orcid.org/0009-0002-7282-0836) - -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [date](http://purl.org/dc/terms/date) "2025-08-29T11:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +### gastrula stage `http://purl.obolibrary.org/obo/UBERON_0000109` +#### Removed +- [gastrula stage](http://purl.obolibrary.org/obo/UBERON_0000109) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "chewing surface" -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "masticatory surface" -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8600149" +### glabella of frontal bone `http://purl.obolibrary.org/obo/UBERON_1200048` -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "occlusal surface" - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://dentaleducationhub.com/surfaces-of-the-teeth/" +#### Added +- Class: [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A tooth surface structure that forms the chewing edge of premolar or molar tooth. It functions to chew or grind food during biting." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://dentaleducationhub.com/surfaces-of-the-teeth/" +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://terminology.hl7.org/CodeSystem-FDI-surface.html" +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) [label](http://www.w3.org/2000/01/rdf-schema#label) "occlusal surface of tooth" +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [occlusal surface of tooth](http://purl.obolibrary.org/obo/UBERON_8600149) SubClassOf [tooth surface structure](http://purl.obolibrary.org/obo/UBERON_8600148) +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Frontal_bone" -### oculomotor nuclear complex `http://purl.obolibrary.org/obo/UBERON_0001715` -#### Removed -- [oculomotor nuclear complex](http://purl.obolibrary.org/obo/UBERON_0001715) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065838" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) [label](http://www.w3.org/2000/01/rdf-schema#label) "glabella of frontal bone" -#### Added -- [oculomotor nuclear complex](http://purl.obolibrary.org/obo/UBERON_0001715) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065838" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [glabella of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200048) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) -### olecranon `http://purl.obolibrary.org/obo/UBERON_0006810` +### glaucothoe stage `http://purl.obolibrary.org/obo/UBERON_0014861` #### Removed -- [olecranon](http://purl.obolibrary.org/obo/UBERON_0006810) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056740" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [glaucothoe stage](http://purl.obolibrary.org/obo/UBERON_0014861) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) -#### Added -- [olecranon](http://purl.obolibrary.org/obo/UBERON_0006810) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D056740" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) -### olfactory cortex `http://purl.obolibrary.org/obo/UBERON_0002894` +### gluteal surface of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200050` #### Added -- [olfactory cortex](http://purl.obolibrary.org/obo/UBERON_0002894) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- Class: [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) -- [olfactory cortex](http://purl.obolibrary.org/obo/UBERON_0002894) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### olfactory placode `http://purl.obolibrary.org/obo/UBERON_0003050` -#### Removed -- [olfactory placode](http://purl.obolibrary.org/obo/UBERON_0003050) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006222" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [olfactory placode](http://purl.obolibrary.org/obo/UBERON_0003050) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006222" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) [label](http://www.w3.org/2000/01/rdf-schema#label) "gluteal surface of ilium of os coxa" -### olfactory tract `http://purl.obolibrary.org/obo/UBERON_0002265` -#### Removed -- [olfactory tract](http://purl.obolibrary.org/obo/UBERON_0002265) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12074" +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) +- [gluteal surface of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200050) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) -### olfactory tubercle `http://purl.obolibrary.org/obo/UBERON_0001883` +### gluteal tuberosity of femur `http://purl.obolibrary.org/obo/UBERON_1200051` #### Added -- [olfactory tubercle](http://purl.obolibrary.org/obo/UBERON_0001883) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- Class: [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) -- [olfactory tubercle](http://purl.obolibrary.org/obo/UBERON_0001883) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### olivocerebellar tract `http://purl.obolibrary.org/obo/UBERON_0002752` -#### Removed -- [olivocerebellar tract](http://purl.obolibrary.org/obo/UBERON_0002752) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006157" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [olivocerebellar tract](http://purl.obolibrary.org/obo/UBERON_0002752) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006157" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Femur" +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) [label](http://www.w3.org/2000/01/rdf-schema#label) "gluteal tuberosity of femur" -### oral cavity `http://purl.obolibrary.org/obo/UBERON_0000167` -#### Removed -- [oral cavity](http://purl.obolibrary.org/obo/UBERON_0000167) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009055" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [gluteal tuberosity of femur](http://purl.obolibrary.org/obo/UBERON_1200051) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [femur](http://purl.obolibrary.org/obo/UBERON_0000981) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + +### granula foveaolae of parietal bone `http://purl.obolibrary.org/obo/UBERON_1200052` #### Added -- [oral cavity](http://purl.obolibrary.org/obo/UBERON_0000167) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D009055" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### otic capsule `http://purl.obolibrary.org/obo/UBERON_0004637` -#### Removed -- [otic capsule](http://purl.obolibrary.org/obo/UBERON_0004637) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005981" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [otic capsule](http://purl.obolibrary.org/obo/UBERON_0004637) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005981" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Parietal_bone" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### ovarian fluid `http://purl.obolibrary.org/obo/UBERON_8480040` -#### Removed -- [ovarian fluid](http://purl.obolibrary.org/obo/UBERON_8480040) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004569" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) [label](http://www.w3.org/2000/01/rdf-schema#label) "granula foveaolae of parietal bone" + +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [granula foveaolae of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200052) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod parietal bone](http://purl.obolibrary.org/obo/UBERON_0000210) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### greater palatine canal of maxilla `http://purl.obolibrary.org/obo/UBERON_1200053` #### Added -- [ovarian fluid](http://purl.obolibrary.org/obo/UBERON_8480040) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0004569" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### pad `http://purl.obolibrary.org/obo/UBERON_2001977` -#### Removed -- [pad](http://purl.obolibrary.org/obo/UBERON_2001977) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D058729" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Maxilla" -#### Added -- [pad](http://purl.obolibrary.org/obo/UBERON_2001977) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D058729" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) [label](http://www.w3.org/2000/01/rdf-schema#label) "greater palatine canal of maxilla" -### palatine tonsil `http://purl.obolibrary.org/obo/UBERON_0002373` -#### Removed -- [palatine tonsil](http://purl.obolibrary.org/obo/UBERON_0002373) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014066" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) SubClassOf [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) + +- [greater palatine canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200053) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxilla](http://purl.obolibrary.org/obo/UBERON_0002397) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### greater wings of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200054` #### Added -- [palatine tonsil](http://purl.obolibrary.org/obo/UBERON_0002373) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014066" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### pallidum `http://purl.obolibrary.org/obo/UBERON_0006514` -#### Removed -- [pallidum](http://purl.obolibrary.org/obo/UBERON_0006514) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005917" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [pallidum](http://purl.obolibrary.org/obo/UBERON_0006514) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005917" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### pancreatic acinus `http://purl.obolibrary.org/obo/UBERON_0001263` -#### Removed -- [pancreatic acinus](http://purl.obolibrary.org/obo/UBERON_0001263) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0000028" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" + +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) [label](http://www.w3.org/2000/01/rdf-schema#label) "greater wings of sphenoid bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [greater wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200054) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) + + +### groove for fibularis longus tendon of cuboid `http://purl.obolibrary.org/obo/UBERON_1200055` #### Added -- [pancreatic acinus](http://purl.obolibrary.org/obo/UBERON_0001263) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0000028" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### pancreatic duct `http://purl.obolibrary.org/obo/UBERON_0007329` -#### Removed -- [pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0007329) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010183" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cuboid_bone" -#### Added -- [pancreatic duct](http://purl.obolibrary.org/obo/UBERON_0007329) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010183" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for fibularis longus tendon of cuboid" -### parabrachial nucleus `http://purl.obolibrary.org/obo/UBERON_0007634` -#### Removed -- [parabrachial nucleus](http://purl.obolibrary.org/obo/UBERON_0007634) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065823" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) + +- [groove for fibularis longus tendon of cuboid](http://purl.obolibrary.org/obo/UBERON_1200055) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [cuboid bone](http://purl.obolibrary.org/obo/UBERON_0001455) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### groove for middle meningeal a. of parietal bone `http://purl.obolibrary.org/obo/UBERON_1200056` #### Added -- [parabrachial nucleus](http://purl.obolibrary.org/obo/UBERON_0007634) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065823" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### parapharyngeal space `http://purl.obolibrary.org/obo/UBERON_0035618` -#### Removed -- [parapharyngeal space](http://purl.obolibrary.org/obo/UBERON_0035618) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080886" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Parietal_bone" -#### Added -- [parapharyngeal space](http://purl.obolibrary.org/obo/UBERON_0035618) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000080886" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for middle meningeal a. of parietal bone" -### parasympathetic ganglion `http://purl.obolibrary.org/obo/UBERON_0001808` -#### Removed -- [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005726" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) + +- [groove for middle meningeal a. of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200056) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod parietal bone](http://purl.obolibrary.org/obo/UBERON_0000210) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### groove for nasopalatine nerve of vomer `http://purl.obolibrary.org/obo/UBERON_1200057` #### Added -- [parasympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001808) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005726" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### parenchyma `http://purl.obolibrary.org/obo/UBERON_0000353` -#### Removed -- [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0000999" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001539" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Vomer" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for nasopalatine nerve of vomer" -#### Added -- [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0000999" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for nasopalatine nerve of vomer](http://purl.obolibrary.org/obo/UBERON_1200057) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vomer](http://purl.obolibrary.org/obo/UBERON_0002396) -- [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001539" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### groove for posterior deep temporal artery of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200058` +#### Added +- Class: [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) -### parietal cortex `http://purl.obolibrary.org/obo/UBERON_0016530` -#### Removed -- [parietal cortex](http://purl.obolibrary.org/obo/UBERON_0016530) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010296" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [parietal cortex](http://purl.obolibrary.org/obo/UBERON_0016530) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010296" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -### parvocellular oculomotor nucleus `http://purl.obolibrary.org/obo/UBERON_0002141` -#### Removed -- [parvocellular oculomotor nucleus](http://purl.obolibrary.org/obo/UBERON_0002141) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065839" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -#### Added -- [parvocellular oculomotor nucleus](http://purl.obolibrary.org/obo/UBERON_0002141) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065839" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for posterior deep temporal artery of squamous part of temporal bone" -### patellofemoral joint `http://purl.obolibrary.org/obo/UBERON_0011166` -#### Removed -- [patellofemoral joint](http://purl.obolibrary.org/obo/UBERON_0011166) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D057071" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for posterior deep temporal artery of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200058) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### groove for subclavian artery of first rib `http://purl.obolibrary.org/obo/UBERON_1200060` #### Added -- [patellofemoral joint](http://purl.obolibrary.org/obo/UBERON_0011166) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D057071" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### pedunculopontine tegmental nucleus `http://purl.obolibrary.org/obo/UBERON_0002142` -#### Removed -- [pedunculopontine tegmental nucleus](http://purl.obolibrary.org/obo/UBERON_0002142) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D045042" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -#### Added -- [pedunculopontine tegmental nucleus](http://purl.obolibrary.org/obo/UBERON_0002142) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D045042" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for subclavian artery of first rib" -### pericardial fluid `http://purl.obolibrary.org/obo/UBERON_0002409` -#### Removed -- [pericardial fluid](http://purl.obolibrary.org/obo/UBERON_0002409) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000069236" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for subclavian artery of first rib](http://purl.obolibrary.org/obo/UBERON_1200060) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### groove for subclavian vein of first rib `http://purl.obolibrary.org/obo/UBERON_1200061` #### Added -- [pericardial fluid](http://purl.obolibrary.org/obo/UBERON_0002409) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000069236" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### periderm `http://purl.obolibrary.org/obo/UBERON_0003055` -#### Removed -- [periderm](http://purl.obolibrary.org/obo/UBERON_0003055) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003377" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" -#### Added -- [periderm](http://purl.obolibrary.org/obo/UBERON_0003055) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003377" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for subclavian vein of first rib" -### periodontal ligament `http://purl.obolibrary.org/obo/UBERON_0008266` -#### Removed -- [periodontal ligament](http://purl.obolibrary.org/obo/UBERON_0008266) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010513" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) + +- [groove for subclavian vein of first rib](http://purl.obolibrary.org/obo/UBERON_1200061) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### groove for superior sagittal sinus of frontal bone `http://purl.obolibrary.org/obo/UBERON_1200062` #### Added -- [periodontal ligament](http://purl.obolibrary.org/obo/UBERON_0008266) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010513" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### perirhinal cortex `http://purl.obolibrary.org/obo/UBERON_0006083` -#### Removed -- [perirhinal cortex](http://purl.obolibrary.org/obo/UBERON_0006083) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071039" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Frontal_bone" -#### Added -- [perirhinal cortex](http://purl.obolibrary.org/obo/UBERON_0006083) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000071039" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for superior sagittal sinus of frontal bone" -### peritoneal fluid `http://purl.obolibrary.org/obo/UBERON_0001268` -#### Removed -- [peritoneal fluid](http://purl.obolibrary.org/obo/UBERON_0001268) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001202" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for superior sagittal sinus of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200062) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) -#### Added -- [peritoneal fluid](http://purl.obolibrary.org/obo/UBERON_0001268) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D001202" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### groove for superior sagittal sinus of parietal bone `http://purl.obolibrary.org/obo/UBERON_1200063` -### pharyngeal arch cartilage `http://purl.obolibrary.org/obo/UBERON_0011004` -#### Removed -- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006051" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- Class: [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006051" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Parietal_bone" -### pharyngotympanic tube `http://purl.obolibrary.org/obo/UBERON_0002393` -#### Removed -- [pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0002393) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005064" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -#### Added -- [pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0002393) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005064" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for superior sagittal sinus of parietal bone" +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) -### photophore `http://purl.obolibrary.org/obo/UBERON_4300194` -#### Removed -- [photophore](http://purl.obolibrary.org/obo/UBERON_4300194) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001477" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for superior sagittal sinus of parietal bone](http://purl.obolibrary.org/obo/UBERON_1200063) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod parietal bone](http://purl.obolibrary.org/obo/UBERON_0000210) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### groove for tendon of flexor hallucis longus muscle of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200064` #### Added -- [photophore](http://purl.obolibrary.org/obo/UBERON_4300194) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001477" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### plantaris `http://purl.obolibrary.org/obo/UBERON_0011905` -#### Removed -- [plantaris](http://purl.obolibrary.org/obo/UBERON_0011905) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006312" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" -#### Added -- [plantaris](http://purl.obolibrary.org/obo/UBERON_0011905) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006312" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for tendon of flexor hallucis longus muscle of calcaneus" -### pleural effusion `http://purl.obolibrary.org/obo/UBERON_0000175` -#### Removed -- [pleural effusion](http://purl.obolibrary.org/obo/UBERON_0000175) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010996" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for tendon of flexor hallucis longus muscle of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200064) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [pleural effusion](http://purl.obolibrary.org/obo/UBERON_0000175) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D010996" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### groove for transverse sinus of squamous part of occipital bone `http://purl.obolibrary.org/obo/UBERON_1200065` - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- Class: [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### pontine raphe nucleus `http://purl.obolibrary.org/obo/UBERON_0002047` -#### Removed -- [pontine raphe nucleus](http://purl.obolibrary.org/obo/UBERON_0002047) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12471" +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -### pontine tegmentum `http://purl.obolibrary.org/obo/UBERON_0003023` -#### Removed -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065821" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Occipital_bone" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -#### Added -- [pontine tegmentum](http://purl.obolibrary.org/obo/UBERON_0003023) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065821" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for transverse sinus of squamous part of occipital bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) +- [groove for transverse sinus of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200065) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) -### postcranial axial skeleton `http://purl.obolibrary.org/obo/UBERON_0002090` -#### Removed -- [postcranial axial skeleton](http://purl.obolibrary.org/obo/UBERON_0002090) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013131" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### groove for vertebral artery of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200066` #### Added -- [postcranial axial skeleton](http://purl.obolibrary.org/obo/UBERON_0002090) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013131" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### predorsal bundle `http://purl.obolibrary.org/obo/UBERON_0002754` -#### Removed -- [predorsal bundle](http://purl.obolibrary.org/obo/UBERON_0002754) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065844" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [predorsal bundle](http://purl.obolibrary.org/obo/UBERON_0002754) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065844" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### preoptic nucleus `http://purl.obolibrary.org/obo/UBERON_0007251` -#### Removed -- [preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0007251) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D011301" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" -#### Added -- [preoptic nucleus](http://purl.obolibrary.org/obo/UBERON_0007251) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D011301" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) [label](http://www.w3.org/2000/01/rdf-schema#label) "groove for vertebral artery of first cervical vertebra" +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) -### pretectal region `http://purl.obolibrary.org/obo/UBERON_0001944` -#### Removed -- [pretectal region](http://purl.obolibrary.org/obo/UBERON_0001944) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066250" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [groove for vertebral artery of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200066) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### gross anatomical part `http://purl.obolibrary.org/obo/UBERON_0000001` #### Added -- [pretectal region](http://purl.obolibrary.org/obo/UBERON_0001944) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066250" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_2759](http://purl.obolibrary.org/obo/NCBITaxon_2759) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:0001008" -### primitive heart tube `http://purl.obolibrary.org/obo/UBERON_0005498` -#### Removed -- [primitive heart tube](http://purl.obolibrary.org/obo/UBERON_0005498) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006179" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:0000001" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Anatomical structure that is part of a multicellular organism and is at the gross anatomical level, e.g. above the level of a cell. Included are portions of organism substances such as blood, multi-cell-part structures such as axon tracts, acellular anatomical structures such as hair, and organism subdivisions such as head. Excluded is the whole organism and more granular parts of the organism, such as atoms, molecules, macromolecular complexes and cells." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:0001008" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) [label](http://www.w3.org/2000/01/rdf-schema#label) "gross anatomical part" -#### Added -- [primitive heart tube](http://purl.obolibrary.org/obo/UBERON_0005498) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006179" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) DisjointWith [multicellular organism](http://purl.obolibrary.org/obo/UBERON_0000468) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) SubClassOf [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) -### primitive streak `http://purl.obolibrary.org/obo/UBERON_0004341` +### gustatory pore `http://purl.obolibrary.org/obo/UBERON_0007691` #### Removed -- [primitive streak](http://purl.obolibrary.org/obo/UBERON_0004341) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054240" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [gustatory pore](http://purl.obolibrary.org/obo/UBERON_0007691) SubClassOf [orifice](http://purl.obolibrary.org/obo/UBERON_0000161) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gustatory pore](http://purl.obolibrary.org/obo/UBERON_0007691) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [primitive streak](http://purl.obolibrary.org/obo/UBERON_0004341) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054240" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [gustatory pore](http://purl.obolibrary.org/obo/UBERON_0007691) SubClassOf [orifice](http://purl.obolibrary.org/obo/UBERON_0000161) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [gustatory pore](http://purl.obolibrary.org/obo/UBERON_0007691) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [taste bud](http://purl.obolibrary.org/obo/UBERON_0001727) -### pronephric duct `http://purl.obolibrary.org/obo/UBERON_0003060` +### head mesenchyme from mesoderm `http://purl.obolibrary.org/obo/UBERON_0006904` #### Removed -- [pronephric duct](http://purl.obolibrary.org/obo/UBERON_0003060) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005991" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904) SubClassOf [head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005253) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" + +#### Added +- [head mesenchyme from mesoderm](http://purl.obolibrary.org/obo/UBERON_0006904) SubClassOf [head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0005253) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### head of radius of radius `http://purl.obolibrary.org/obo/UBERON_1200067` #### Added -- [pronephric duct](http://purl.obolibrary.org/obo/UBERON_0003060) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0005991" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### pronephros `http://purl.obolibrary.org/obo/UBERON_0002120` -#### Removed -- [pronephros](http://purl.obolibrary.org/obo/UBERON_0002120) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060910" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Radius_(bone)" -#### Added -- [pronephros](http://purl.obolibrary.org/obo/UBERON_0002120) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060910" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of radius of radius" -### pudendal nerve `http://purl.obolibrary.org/obo/UBERON_0011390` -#### Removed -- [pudendal nerve](http://purl.obolibrary.org/obo/UBERON_0011390) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060525" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [head of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200067) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [radius bone](http://purl.obolibrary.org/obo/UBERON_0001423) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### head of second distal phalanx of foot `http://purl.obolibrary.org/obo/UBERON_1200068` #### Added -- [pudendal nerve](http://purl.obolibrary.org/obo/UBERON_0011390) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D060525" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### pulmonary surfactant `http://purl.obolibrary.org/obo/UBERON_0008826` -#### Removed -- [pulmonary surfactant](http://purl.obolibrary.org/obo/UBERON_0008826) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D011663" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [pulmonary surfactant](http://purl.obolibrary.org/obo/UBERON_0008826) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D011663" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of second distal phalanx of foot" -### pupa `http://purl.obolibrary.org/obo/UBERON_0003143` -#### Removed -- [pupa](http://purl.obolibrary.org/obo/UBERON_0003143) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D011679" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [head of second distal phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200068) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of pedal digit 2](http://purl.obolibrary.org/obo/UBERON_0004316) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### head of second distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200069` #### Added -- [pupa](http://purl.obolibrary.org/obo/UBERON_0003143) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D011679" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### quadriceps femoris `http://purl.obolibrary.org/obo/UBERON_0001377` -#### Removed -- [quadriceps femoris](http://purl.obolibrary.org/obo/UBERON_0001377) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052097" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [quadriceps femoris](http://purl.obolibrary.org/obo/UBERON_0001377) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052097" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### red nucleus `http://purl.obolibrary.org/obo/UBERON_0001947` -#### Removed -- [red nucleus](http://purl.obolibrary.org/obo/UBERON_0001947) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006329" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of second distal phalanx of hand" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) -#### Added -- [red nucleus](http://purl.obolibrary.org/obo/UBERON_0001947) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006329" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200069) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 2](http://purl.obolibrary.org/obo/UBERON_0004311) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### head of second middle phalanx of foot `http://purl.obolibrary.org/obo/UBERON_1200070` -### reproductive gland `http://purl.obolibrary.org/obo/UBERON_0003937` -#### Removed -- [reproductive gland](http://purl.obolibrary.org/obo/UBERON_0003937) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006162" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- Class: [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [reproductive gland](http://purl.obolibrary.org/obo/UBERON_0003937) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006162" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### reproductive system `http://purl.obolibrary.org/obo/UBERON_0000990` -#### Removed -- [reproductive system](http://purl.obolibrary.org/obo/UBERON_0000990) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005835" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" -#### Added -- [reproductive system](http://purl.obolibrary.org/obo/UBERON_0000990) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005835" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of second middle phalanx of foot" +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) -### respiratory muscle `http://purl.obolibrary.org/obo/UBERON_0014398` -#### Removed -- [respiratory muscle](http://purl.obolibrary.org/obo/UBERON_0014398) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012132" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of second middle phalanx of foot](http://purl.obolibrary.org/obo/UBERON_1200070) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [middle phalanx of pedal digit 2](http://purl.obolibrary.org/obo/UBERON_0004324) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### head of second middle phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200071` #### Added -- [respiratory muscle](http://purl.obolibrary.org/obo/UBERON_0014398) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012132" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### rete mirabile `http://purl.obolibrary.org/obo/UBERON_0013218` -#### Removed -- [rete mirabile](http://purl.obolibrary.org/obo/UBERON_0013218) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006363" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [rete mirabile](http://purl.obolibrary.org/obo/UBERON_0013218) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006363" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of second middle phalanx of hand" -### rib `http://purl.obolibrary.org/obo/UBERON_0002228` -#### Removed -- [rib](http://purl.obolibrary.org/obo/UBERON_0002228) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0012403" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [head of second middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200071) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [middle phalanx of manual digit 2](http://purl.obolibrary.org/obo/UBERON_0004320) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### head of third middle phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200072` #### Added -- [rib](http://purl.obolibrary.org/obo/UBERON_0002228) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "VO:0012403" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### round ligament of liver `http://purl.obolibrary.org/obo/UBERON_0006588` -#### Removed -- [round ligament of liver](http://purl.obolibrary.org/obo/UBERON_0006588) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000069592" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [round ligament of liver](http://purl.obolibrary.org/obo/UBERON_0006588) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000069592" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of third middle phalanx of hand" -### round ligament of uterus `http://purl.obolibrary.org/obo/UBERON_0006589` -#### Removed -- [round ligament of uterus](http://purl.obolibrary.org/obo/UBERON_0006589) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012404" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of third middle phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200072) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [middle phalanx of manual digit 3](http://purl.obolibrary.org/obo/UBERON_0004321) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) -#### Added -- [round ligament of uterus](http://purl.obolibrary.org/obo/UBERON_0006589) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012404" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### head of ulna of ulna `http://purl.obolibrary.org/obo/UBERON_1200073` - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- Class: [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### rubrospinal tract `http://purl.obolibrary.org/obo/UBERON_0002714` -#### Removed -- [rubrospinal tract](http://purl.obolibrary.org/obo/UBERON_0002714) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006159" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [rubrospinal tract](http://purl.obolibrary.org/obo/UBERON_0002714) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006159" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ulna" -### scala media `http://purl.obolibrary.org/obo/UBERON_0002295` -#### Removed -- [scala media](http://purl.obolibrary.org/obo/UBERON_0002295) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D003053" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) [label](http://www.w3.org/2000/01/rdf-schema#label) "head of ulna of ulna" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) -#### Added -- [scala media](http://purl.obolibrary.org/obo/UBERON_0002295) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D003053" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [head of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200073) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ulna](http://purl.obolibrary.org/obo/UBERON_0001424) -### scala vestibuli `http://purl.obolibrary.org/obo/UBERON_0001863` +### head somite `http://purl.obolibrary.org/obo/UBERON_0005594` #### Removed -- [scala vestibuli](http://purl.obolibrary.org/obo/UBERON_0001863) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054738" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [head somite](http://purl.obolibrary.org/obo/UBERON_0005594) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [head paraxial mesoderm](http://purl.obolibrary.org/obo/UBERON_0009617) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" #### Added -- [scala vestibuli](http://purl.obolibrary.org/obo/UBERON_0001863) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054738" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [head somite](http://purl.obolibrary.org/obo/UBERON_0005594) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [head paraxial mesoderm](http://purl.obolibrary.org/obo/UBERON_0009617) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### hiatus and groove of petrous part of temporal bone for greater petrosal nerve `http://purl.obolibrary.org/obo/UBERON_1200074` -### sclerotome `http://purl.obolibrary.org/obo/UBERON_0003089` -#### Removed -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006255" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- Class: [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [sclerotome](http://purl.obolibrary.org/obo/UBERON_0003089) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006255" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### secondary olfactory cortex `http://purl.obolibrary.org/obo/UBERON_0002895` -#### Removed -- [secondary olfactory cortex](http://purl.obolibrary.org/obo/UBERON_0002895) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D018728" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" -#### Added -- [secondary olfactory cortex](http://purl.obolibrary.org/obo/UBERON_0002895) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D018728" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) [label](http://www.w3.org/2000/01/rdf-schema#label) "hiatus and groove of petrous part of temporal bone for greater petrosal nerve" +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) -### semicircular duct `http://purl.obolibrary.org/obo/UBERON_0001856` -#### Removed -- [semicircular duct](http://purl.obolibrary.org/obo/UBERON_0001856) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054776" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [hiatus and groove of petrous part of temporal bone for greater petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200074) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### hiatus and groove of petrous part of temporal bone for lesser petrosal nerve `http://purl.obolibrary.org/obo/UBERON_1200075` #### Added -- [semicircular duct](http://purl.obolibrary.org/obo/UBERON_0001856) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054776" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### shoulder joint `http://purl.obolibrary.org/obo/UBERON_0016884` -#### Removed -- [shoulder joint](http://purl.obolibrary.org/obo/UBERON_0016884) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012785" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -#### Added -- [shoulder joint](http://purl.obolibrary.org/obo/UBERON_0016884) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D012785" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### silk `http://purl.obolibrary.org/obo/UBERON_0012245` -#### Removed -- [silk](http://purl.obolibrary.org/obo/UBERON_0012245) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D047011" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) [label](http://www.w3.org/2000/01/rdf-schema#label) "hiatus and groove of petrous part of temporal bone for lesser petrosal nerve" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) -- [silk](http://purl.obolibrary.org/obo/UBERON_0012245) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002854" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [hiatus and groove of petrous part of temporal bone for lesser petrosal nerve](http://purl.obolibrary.org/obo/UBERON_1200075) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### hyoid region bone `http://purl.obolibrary.org/obo/UBERON_1200076` #### Added -- [silk](http://purl.obolibrary.org/obo/UBERON_0012245) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D047011" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [silk](http://purl.obolibrary.org/obo/UBERON_0012245) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002854" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -### sixth lumbar dorsal root ganglion `http://purl.obolibrary.org/obo/UBERON_1200001` +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hyoid_bone" -#### Added -- Class: [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3618"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [contributor](http://purl.org/dc/terms/contributor) [0000-0003-0289-8988](https://orcid.org/0000-0003-0289-8988) +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) [label](http://www.w3.org/2000/01/rdf-schema#label) "hyoid region bone" -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [date](http://purl.org/dc/terms/date) "2025-11-03T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [hyoid region bone](http://purl.obolibrary.org/obo/UBERON_1200076) SubClassOf [zone of hyoid bone](http://purl.obolibrary.org/obo/UBERON_0010273) -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "dragon-ai-agent" -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "L6 dorsal root ganglion" +### iliac tubercle of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200080` -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "sixth lumbar spinal ganglion" +#### Added +- Class: [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:1200001" +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [defined_by_ordinal_series](http://purl.obolibrary.org/obo/uberon/core#defined_by_ordinal_series) +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:18316160" +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) [label](http://www.w3.org/2000/01/rdf-schema#label) "sixth lumbar dorsal root ganglion" +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [sixth lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_1200001) SubClassOf [lumbar dorsal root ganglion](http://purl.obolibrary.org/obo/UBERON_0002836) +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -### spermaceti `http://purl.obolibrary.org/obo/UBERON_0009755` -#### Removed -- [spermaceti](http://purl.obolibrary.org/obo/UBERON_0009755) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:C009301" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) [label](http://www.w3.org/2000/01/rdf-schema#label) "iliac tubercle of ilium of os coxa" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) -#### Added -- [spermaceti](http://purl.obolibrary.org/obo/UBERON_0009755) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:C009301" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [iliac tubercle of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200080) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### iliac tuberosity of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200081` -### spinal cord lateral horn `http://purl.obolibrary.org/obo/UBERON_0004676` -#### Removed -- [spinal cord lateral horn](http://purl.obolibrary.org/obo/UBERON_0004676) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066152" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +#### Added +- Class: [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -#### Added -- [spinal cord lateral horn](http://purl.obolibrary.org/obo/UBERON_0004676) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066152" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### spinothalamic tract `http://purl.obolibrary.org/obo/UBERON_0007703` -#### Removed -- [spinothalamic tract](http://purl.obolibrary.org/obo/UBERON_0007703) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013133" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) [label](http://www.w3.org/2000/01/rdf-schema#label) "iliac tuberosity of ilium of os coxa" -- [spinothalamic tract](http://purl.obolibrary.org/obo/UBERON_0007703) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006128" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [iliac tuberosity of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200081) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) -#### Added -- [spinothalamic tract](http://purl.obolibrary.org/obo/UBERON_0007703) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013133" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### iliopubic ramus of os coxa `http://purl.obolibrary.org/obo/UBERON_1200082` - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- Class: [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) -- [spinothalamic tract](http://purl.obolibrary.org/obo/UBERON_0007703) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006128" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### striatum `http://purl.obolibrary.org/obo/UBERON_0002435` +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [striatum](http://purl.obolibrary.org/obo/UBERON_0002435) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [striatum](http://purl.obolibrary.org/obo/UBERON_0002435) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" -### subcutaneous adipose tissue `http://purl.obolibrary.org/obo/UBERON_0002190` -#### Removed -- [subcutaneous adipose tissue](http://purl.obolibrary.org/obo/UBERON_0002190) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D015434" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) [label](http://www.w3.org/2000/01/rdf-schema#label) "iliopubic ramus of os coxa" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) -#### Added -- [subcutaneous adipose tissue](http://purl.obolibrary.org/obo/UBERON_0002190) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D015434" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [iliopubic ramus of os coxa](http://purl.obolibrary.org/obo/UBERON_1200082) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) -### subfornical organ `http://purl.obolibrary.org/obo/UBERON_0002219` +### infant stage `http://purl.obolibrary.org/obo/UBERON_0034920` #### Removed -- [subfornical organ](http://purl.obolibrary.org/obo/UBERON_0002219) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006266" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [infant stage](http://purl.obolibrary.org/obo/UBERON_0034920) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### inferior articular facet of eighth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200084` #### Added -- [subfornical organ](http://purl.obolibrary.org/obo/UBERON_0002219) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006266" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### subiculum `http://purl.obolibrary.org/obo/UBERON_0002191` -#### Removed -- [subiculum](http://purl.obolibrary.org/obo/UBERON_0002191) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:10301" +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### substantia nigra pars compacta `http://purl.obolibrary.org/obo/UBERON_0001965` -#### Removed -- [substantia nigra pars compacta](http://purl.obolibrary.org/obo/UBERON_0001965) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065842" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" -#### Added -- [substantia nigra pars compacta](http://purl.obolibrary.org/obo/UBERON_0001965) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065842" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of eighth thoracic vertebra" +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) -### substantia nigra pars reticulata `http://purl.obolibrary.org/obo/UBERON_0001966` -#### Removed -- [substantia nigra pars reticulata](http://purl.obolibrary.org/obo/UBERON_0001966) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065841" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [inferior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200084) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 8](http://purl.obolibrary.org/obo/UBERON_0011050) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + +### inferior articular facet of eleventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200085` #### Added -- [substantia nigra pars reticulata](http://purl.obolibrary.org/obo/UBERON_0001966) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065841" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### superior olivary complex `http://purl.obolibrary.org/obo/UBERON_0002128` -#### Removed -- [superior olivary complex](http://purl.obolibrary.org/obo/UBERON_0002128) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065832" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -#### Added -- [superior olivary complex](http://purl.obolibrary.org/obo/UBERON_0002128) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065832" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" -### superior sagittal sinus `http://purl.obolibrary.org/obo/UBERON_0001642` -#### Removed -- [superior sagittal sinus](http://purl.obolibrary.org/obo/UBERON_0001642) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054063" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of eleventh thoracic vertebra" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [inferior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200085) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 11](http://purl.obolibrary.org/obo/UBERON_0004635) + + +### inferior articular facet of fifth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200086` + +#### Added +- Class: [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of fifth cervical vertebra" + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200086) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004614) + + +### inferior articular facet of fifth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200087` + +#### Added +- Class: [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of fifth thoracic vertebra" + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200087) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004630) + + +### inferior articular facet of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200088` + +#### Added +- Class: [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of first cervical vertebra" + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200088) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### inferior articular facet of first thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200089` + +#### Added +- Class: [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of first thoracic vertebra" + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200089) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004626) + + +### inferior articular facet of fourth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200090` + +#### Added +- Class: [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of fourth cervical vertebra" + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200090) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004613) + + +### inferior articular facet of fourth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200091` + +#### Added +- Class: [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of fourth thoracic vertebra" + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200091) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004629) + + +### inferior articular facet of ninth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200092` + +#### Added +- Class: [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of ninth thoracic vertebra" + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200092) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 9](http://purl.obolibrary.org/obo/UBERON_0004633) + + +### inferior articular facet of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200093` + +#### Added +- Class: [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of second cervical vertebra" + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200093) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### inferior articular facet of second thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200094` + +#### Added +- Class: [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of second thoracic vertebra" + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200094) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004627) + + +### inferior articular facet of seventh cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200095` + +#### Added +- Class: [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of seventh cervical vertebra" + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200095) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004616) + + +### inferior articular facet of seventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200096` + +#### Added +- Class: [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of seventh thoracic vertebra" + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200096) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004632) + + +### inferior articular facet of sixth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200097` + +#### Added +- Class: [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of sixth cervical vertebra" + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200097) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004615) + + +### inferior articular facet of sixth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200098` + +#### Added +- Class: [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of sixth thoracic vertebra" + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200098) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004631) + + +### inferior articular facet of tenth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200099` + +#### Added +- Class: [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of tenth thoracic vertebra" + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200099) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 10](http://purl.obolibrary.org/obo/UBERON_0004634) + + +### inferior articular facet of third cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200100` + +#### Added +- Class: [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of third cervical vertebra" + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200100) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004612) + + +### inferior articular facet of third thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200101` + +#### Added +- Class: [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of third thoracic vertebra" + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200101) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004628) + + +### inferior articular facet of twelfth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200102` + +#### Added +- Class: [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular facet of twelfth thoracic vertebra" + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200102) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 12](http://purl.obolibrary.org/obo/UBERON_0004636) + + +### inferior articular process of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200103` + +#### Added +- Class: [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular process of first cervical vertebra" + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [inferior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200103) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### inferior articular process of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200104` + +#### Added +- Class: [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior articular process of second cervical vertebra" + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [inferior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200104) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### inferior costal facet of eleventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200105` + +#### Added +- Class: [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior costal facet of eleventh thoracic vertebra" + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200105) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 11](http://purl.obolibrary.org/obo/UBERON_0004635) + + +### inferior costal facet of tenth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200106` + +#### Added +- Class: [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior costal facet of tenth thoracic vertebra" + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200106) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 10](http://purl.obolibrary.org/obo/UBERON_0004634) + + +### inferior mental spine of mandible `http://purl.obolibrary.org/obo/UBERON_1200107` + +#### Added +- Class: [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior mental spine of mandible" + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [inferior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200107) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### inferior nuchal line of squamous part of occipital bone `http://purl.obolibrary.org/obo/UBERON_1200108` + +#### Added +- Class: [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Occipital_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior nuchal line of squamous part of occipital bone" + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [inferior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200108) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) + + +### inferior vertebral notch of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200109` + +#### Added +- Class: [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) [label](http://www.w3.org/2000/01/rdf-schema#label) "inferior vertebral notch of first cervical vertebra" + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [inferior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200109) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### infraglenoid tubercle of scapula `http://purl.obolibrary.org/obo/UBERON_1200110` + +#### Added +- Class: [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) [label](http://www.w3.org/2000/01/rdf-schema#label) "infraglenoid tubercle of scapula" + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [infraglenoid tubercle of scapula](http://purl.obolibrary.org/obo/UBERON_1200110) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) + + +### infraspinous fossa of scapula `http://purl.obolibrary.org/obo/UBERON_1200112` + +#### Added +- Class: [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) [label](http://www.w3.org/2000/01/rdf-schema#label) "infraspinous fossa of scapula" + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [infraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200112) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) + + +### inner cell mass derived epiblast `http://purl.obolibrary.org/obo/UBERON_0008780` +#### Removed +- [inner cell mass derived epiblast](http://purl.obolibrary.org/obo/UBERON_0008780) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [inner cell mass](http://purl.obolibrary.org/obo/UBERON_0000087) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" + +#### Added +- [inner cell mass derived epiblast](http://purl.obolibrary.org/obo/UBERON_0008780) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [inner cell mass](http://purl.obolibrary.org/obo/UBERON_0000087) + + +### inner renal medulla interstitium `http://purl.obolibrary.org/obo/UBERON_0005214` +#### Removed +- [inner renal medulla interstitium](http://purl.obolibrary.org/obo/UBERON_0005214) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [inner medulla of kidney](http://purl.obolibrary.org/obo/UBERON_0001294) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [inner renal medulla interstitium](http://purl.obolibrary.org/obo/UBERON_0005214) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [inner medulla of kidney](http://purl.obolibrary.org/obo/UBERON_0001294) + + +### insect Bolwig organ primordium `http://purl.obolibrary.org/obo/UBERON_6005830` +#### Removed +- [insect Bolwig organ primordium](http://purl.obolibrary.org/obo/UBERON_6005830) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P1 BolOrg" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect Bolwig organ primordium](http://purl.obolibrary.org/obo/UBERON_6005830) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P1 BolOrg" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect adult clypeo-labral primordium `http://purl.obolibrary.org/obo/UBERON_6005514` +#### Removed +- [insect adult clypeo-labral primordium](http://purl.obolibrary.org/obo/UBERON_6005514) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "A AdCly" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect adult clypeo-labral primordium](http://purl.obolibrary.org/obo/UBERON_6005514) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "A AdCly" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect anterior ectoderm `http://purl.obolibrary.org/obo/UBERON_6000119` +#### Removed +- [insect anterior ectoderm](http://purl.obolibrary.org/obo/UBERON_6000119) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The region of the ectoderm anterior to the cephalic furrow." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect anterior ectoderm](http://purl.obolibrary.org/obo/UBERON_6000119) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The region of the ectoderm anterior to the cephalic furrow." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect cardiogenic mesoderm `http://purl.obolibrary.org/obo/UBERON_6005541` +#### Removed +- [insect cardiogenic mesoderm](http://purl.obolibrary.org/obo/UBERON_6005541) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "P2 CardMes" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect cardiogenic mesoderm](http://purl.obolibrary.org/obo/UBERON_6005541) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "P2 CardMes" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect dorsal appendage `http://purl.obolibrary.org/obo/UBERON_6000046` +#### Removed +- [insect dorsal appendage](http://purl.obolibrary.org/obo/UBERON_6000046) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Paired appendage of the eggshell, located on the anterior-dorsal side of the egg, just posterior to the operculum. Functions as a respiratory structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect dorsal appendage](http://purl.obolibrary.org/obo/UBERON_6000046) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Paired appendage of the eggshell, located on the anterior-dorsal side of the egg, just posterior to the operculum. Functions as a respiratory structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect embryonic abdomen `http://purl.obolibrary.org/obo/UBERON_6000171` +#### Removed +- [insect embryonic abdomen](http://purl.obolibrary.org/obo/UBERON_6000171) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Abdomen of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect embryonic abdomen](http://purl.obolibrary.org/obo/UBERON_6000171) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Abdomen of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect embryonic mesothoracic segment `http://purl.obolibrary.org/obo/UBERON_6000169` +#### Removed +- [insect embryonic mesothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000169) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Mesothoracic segment of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect embryonic mesothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000169) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Mesothoracic segment of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect embryonic metathoracic segment `http://purl.obolibrary.org/obo/UBERON_6000170` +#### Removed +- [insect embryonic metathoracic segment](http://purl.obolibrary.org/obo/UBERON_6000170) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Metathoracic segment of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect embryonic metathoracic segment](http://purl.obolibrary.org/obo/UBERON_6000170) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Metathoracic segment of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect embryonic prothoracic segment `http://purl.obolibrary.org/obo/UBERON_6000168` +#### Removed +- [insect embryonic prothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000168) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Prothoracic segment of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect embryonic prothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000168) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Prothoracic segment of the embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect epithelial furrow `http://purl.obolibrary.org/obo/UBERON_6007424` +#### Removed +- [insect epithelial furrow](http://purl.obolibrary.org/obo/UBERON_6007424) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A region of an epithelium that folds inwards from the epithelial plane to form a furrow." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect epithelial furrow](http://purl.obolibrary.org/obo/UBERON_6007424) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A region of an epithelium that folds inwards from the epithelial plane to form a furrow." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect external sensillum `http://purl.obolibrary.org/obo/UBERON_6007231` +#### Removed +- [insect external sensillum](http://purl.obolibrary.org/obo/UBERON_6007231) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Sensillum which is embedded in the body wall and has a specific cuticular structure involved in the transduction of some sensory signal as a part." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect external sensillum](http://purl.obolibrary.org/obo/UBERON_6007231) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Sensillum which is embedded in the body wall and has a specific cuticular structure involved in the transduction of some sensory signal as a part." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect internal sense organ `http://purl.obolibrary.org/obo/UBERON_6007373` +#### Removed +- [insect internal sense organ](http://purl.obolibrary.org/obo/UBERON_6007373) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Sense organ that is internal to the animal - i.e. having no part that is part of the cuticle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect internal sense organ](http://purl.obolibrary.org/obo/UBERON_6007373) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Sense organ that is internal to the animal - i.e. having no part that is part of the cuticle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect internal sensillum `http://purl.obolibrary.org/obo/UBERON_6007233` +#### Removed +- [insect internal sensillum](http://purl.obolibrary.org/obo/UBERON_6007233) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Sensillum that is internal to the animal - i.e. having no part that is part of the cuticle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect internal sensillum](http://purl.obolibrary.org/obo/UBERON_6007233) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Sensillum that is internal to the animal - i.e. having no part that is part of the cuticle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect mesothoracic segment `http://purl.obolibrary.org/obo/UBERON_6000018` +#### Removed +- [insect mesothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000018) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The second (middle) segment of the thorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect mesothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000018) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The second (middle) segment of the thorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect mesothoracic tergum `http://purl.obolibrary.org/obo/UBERON_6004580` +#### Removed +- [insect mesothoracic tergum](http://purl.obolibrary.org/obo/UBERON_6004580) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The dorsal sclerites (tergites) of the mesothorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect mesothoracic tergum](http://purl.obolibrary.org/obo/UBERON_6004580) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The dorsal sclerites (tergites) of the mesothorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect mesothoracic tergum primordium `http://purl.obolibrary.org/obo/UBERON_6006032` +#### Removed +- [insect mesothoracic tergum primordium](http://purl.obolibrary.org/obo/UBERON_6006032) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Region of the dorsal mesothoracic disc that will develop into the mesothoracic tergum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FlyBase:FBrf0027793" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect mesothoracic tergum primordium](http://purl.obolibrary.org/obo/UBERON_6006032) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Region of the dorsal mesothoracic disc that will develop into the mesothoracic tergum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FlyBase:FBrf0027793" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect metathoracic segment `http://purl.obolibrary.org/obo/UBERON_6000019` +#### Removed +- [insect metathoracic segment](http://purl.obolibrary.org/obo/UBERON_6000019) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The third (most posterior) segment of the thorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect metathoracic segment](http://purl.obolibrary.org/obo/UBERON_6000019) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The third (most posterior) segment of the thorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect non-connected developing system `http://purl.obolibrary.org/obo/UBERON_6040003` +#### Removed +- [insect non-connected developing system](http://purl.obolibrary.org/obo/UBERON_6040003) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The sum of all the anlagen and primordia that will develop into a single system." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect non-connected developing system](http://purl.obolibrary.org/obo/UBERON_6040003) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The sum of all the anlagen and primordia that will develop into a single system." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect presumptive embryonic/larval central nervous system `http://purl.obolibrary.org/obo/UBERON_6001056` +#### Removed +- [insect presumptive embryonic/larval central nervous system](http://purl.obolibrary.org/obo/UBERON_6001056) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic central nervous system" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect presumptive embryonic/larval central nervous system](http://purl.obolibrary.org/obo/UBERON_6001056) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic central nervous system" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect presumptive embryonic/larval nervous system `http://purl.obolibrary.org/obo/UBERON_6001055` +#### Removed +- [insect presumptive embryonic/larval nervous system](http://purl.obolibrary.org/obo/UBERON_6001055) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic nervous system" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect presumptive embryonic/larval nervous system](http://purl.obolibrary.org/obo/UBERON_6001055) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic nervous system" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect presumptive embryonic/larval system `http://purl.obolibrary.org/obo/UBERON_6007116` +#### Removed +- [insect presumptive embryonic/larval system](http://purl.obolibrary.org/obo/UBERON_6007116) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The sum of all the developing presumptive components of a specific embryonic/larval system in an embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect presumptive embryonic/larval system](http://purl.obolibrary.org/obo/UBERON_6007116) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The sum of all the developing presumptive components of a specific embryonic/larval system in an embryo." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect presumptive embryonic/larval tracheal system `http://purl.obolibrary.org/obo/UBERON_6005569` +#### Removed +- [insect presumptive embryonic/larval tracheal system](http://purl.obolibrary.org/obo/UBERON_6005569) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The sum of all the structures in the embryo that will develop into the embryonic/larval tracheal system. This corresponds to the tracheal primordia and their component tracheal branch primordia along with primordia of the spiracles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +- [insect presumptive embryonic/larval tracheal system](http://purl.obolibrary.org/obo/UBERON_6005569) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic tracheal system" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect presumptive embryonic/larval tracheal system](http://purl.obolibrary.org/obo/UBERON_6005569) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The sum of all the structures in the embryo that will develop into the embryonic/larval tracheal system. This corresponds to the tracheal primordia and their component tracheal branch primordia along with primordia of the spiracles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + +- [insect presumptive embryonic/larval tracheal system](http://purl.obolibrary.org/obo/UBERON_6005569) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "embryonic tracheal system" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect prothoracic segment `http://purl.obolibrary.org/obo/UBERON_6000017` +#### Removed +- [insect prothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000017) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The first (most anterior) segment of the thorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect prothoracic segment](http://purl.obolibrary.org/obo/UBERON_6000017) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The first (most anterior) segment of the thorax." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect region of integument `http://purl.obolibrary.org/obo/UBERON_6007284` +#### Removed +- [insect region of integument](http://purl.obolibrary.org/obo/UBERON_6007284) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A region of cuticle and its underlying epidermis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect region of integument](http://purl.obolibrary.org/obo/UBERON_6007284) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A region of cuticle and its underlying epidermis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect segmental subdivision of integument `http://purl.obolibrary.org/obo/UBERON_6007285` +#### Removed +- [insect segmental subdivision of integument](http://purl.obolibrary.org/obo/UBERON_6007285) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A segmental subdivision of the integument of the whole animal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect segmental subdivision of integument](http://purl.obolibrary.org/obo/UBERON_6007285) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A segmental subdivision of the integument of the whole animal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect segmental subdivision of organ system `http://purl.obolibrary.org/obo/UBERON_6007331` +#### Removed +- [insect segmental subdivision of organ system](http://purl.obolibrary.org/obo/UBERON_6007331) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The part of some organism that is part of some specified segment." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect segmental subdivision of organ system](http://purl.obolibrary.org/obo/UBERON_6007331) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The part of some organism that is part of some specified segment." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect sensilla row `http://purl.obolibrary.org/obo/UBERON_6100153` +#### Removed +- [insect sensilla row](http://purl.obolibrary.org/obo/UBERON_6100153) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A row of sensilla." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect sensilla row](http://purl.obolibrary.org/obo/UBERON_6100153) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A row of sensilla." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect synaptic neuropil `http://purl.obolibrary.org/obo/UBERON_6040005` +#### Removed +- [insect synaptic neuropil](http://purl.obolibrary.org/obo/UBERON_6040005) SubClassOf [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) + +#### Added +- [insect synaptic neuropil](http://purl.obolibrary.org/obo/UBERON_6040005) SubClassOf [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) + + +### insect synaptic neuropil block `http://purl.obolibrary.org/obo/UBERON_6041000` +#### Removed +- [insect synaptic neuropil block](http://purl.obolibrary.org/obo/UBERON_6041000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A closely associated group of synaptic neuropil domains." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:KI" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect synaptic neuropil block](http://purl.obolibrary.org/obo/UBERON_6041000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A closely associated group of synaptic neuropil domains." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:KI" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect tracheal primordium `http://purl.obolibrary.org/obo/UBERON_6005037` +#### Removed +- [insect tracheal primordium](http://purl.obolibrary.org/obo/UBERON_6005037) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "P2 TrachP" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect tracheal primordium](http://purl.obolibrary.org/obo/UBERON_6005037) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "P2 TrachP" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect trichome `http://purl.obolibrary.org/obo/UBERON_6004979` +#### Removed +- [insect trichome](http://purl.obolibrary.org/obo/UBERON_6004979) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Non-innervated projection of the cuticle around an actin-rich cellular process of an underlying epidermal cell." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect trichome](http://purl.obolibrary.org/obo/UBERON_6004979) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Non-innervated projection of the cuticle around an actin-rich cellular process of an underlying epidermal cell." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect trunk ectoderm `http://purl.obolibrary.org/obo/UBERON_6007045` +#### Removed +- [insect trunk ectoderm](http://purl.obolibrary.org/obo/UBERON_6007045) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The region of the ectoderm posterior to the cephalic furrow." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect trunk ectoderm](http://purl.obolibrary.org/obo/UBERON_6007045) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The region of the ectoderm posterior to the cephalic furrow." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect trunk mesoderm `http://purl.obolibrary.org/obo/UBERON_6000128` +#### Removed +- [insect trunk mesoderm](http://purl.obolibrary.org/obo/UBERON_6000128) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 TrMes" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect trunk mesoderm](http://purl.obolibrary.org/obo/UBERON_6000128) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 TrMes" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect ventral ectoderm `http://purl.obolibrary.org/obo/UBERON_6005558` +#### Removed +- [insect ventral ectoderm](http://purl.obolibrary.org/obo/UBERON_6005558) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 VenEc" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect ventral ectoderm](http://purl.obolibrary.org/obo/UBERON_6005558) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 VenEc" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect ventral epidermis primordium `http://purl.obolibrary.org/obo/UBERON_6005533` +#### Removed +- [insect ventral epidermis primordium](http://purl.obolibrary.org/obo/UBERON_6005533) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 iVenEp" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect ventral epidermis primordium](http://purl.obolibrary.org/obo/UBERON_6005533) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 iVenEp" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect visual primordium `http://purl.obolibrary.org/obo/UBERON_6001059` +#### Removed +- [insect visual primordium](http://purl.obolibrary.org/obo/UBERON_6001059) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 VisSys" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect visual primordium](http://purl.obolibrary.org/obo/UBERON_6001059) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "P2 VisSys" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### insect wing hair `http://purl.obolibrary.org/obo/UBERON_6004340` +#### Removed +- [insect wing hair](http://purl.obolibrary.org/obo/UBERON_6004340) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The posteriorly oriented trichome of a cell of the wing blade. Each cell makes one of these trichomes at its posterior vertex." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [insect wing hair](http://purl.obolibrary.org/obo/UBERON_6004340) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The posteriorly oriented trichome of a cell of the wing blade. Each cell makes one of these trichomes at its posterior vertex." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### integumental surface `http://purl.obolibrary.org/obo/UBERON_0022295` +#### Removed +- [integumental surface](http://purl.obolibrary.org/obo/UBERON_0022295) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The outer surface of an organism or its integumental system." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:DOS" + +#### Added +- [integumental surface](http://purl.obolibrary.org/obo/UBERON_0022295) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The outer surface of an organism or its integumental system." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### intercondylar notch of femur `http://purl.obolibrary.org/obo/UBERON_1200113` + +#### Added +- Class: [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Femur" + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) [label](http://www.w3.org/2000/01/rdf-schema#label) "intercondylar notch of femur" + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [intercondylar notch of femur](http://purl.obolibrary.org/obo/UBERON_1200113) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [femur](http://purl.obolibrary.org/obo/UBERON_0000981) + + +### intercostal muscle `http://purl.obolibrary.org/obo/UBERON_0001111` +#### Removed +- [intercostal muscle](http://purl.obolibrary.org/obo/UBERON_0001111) SubClassOf [RO_0002372](http://purl.obolibrary.org/obo/RO_0002372) some [rib](http://purl.obolibrary.org/obo/UBERON_0002228) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "ribs 1-11" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "dbpedia" + +- [intercostal muscle](http://purl.obolibrary.org/obo/UBERON_0001111) SubClassOf [RO_0002373](http://purl.obolibrary.org/obo/RO_0002373) some [rib](http://purl.obolibrary.org/obo/UBERON_0002228) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "ribs 2-12" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "dbpedia" + +#### Added +- [intercostal muscle](http://purl.obolibrary.org/obo/UBERON_0001111) SubClassOf [RO_0002372](http://purl.obolibrary.org/obo/RO_0002372) some [rib](http://purl.obolibrary.org/obo/UBERON_0002228) + +- [intercostal muscle](http://purl.obolibrary.org/obo/UBERON_0001111) SubClassOf [RO_0002373](http://purl.obolibrary.org/obo/RO_0002373) some [rib](http://purl.obolibrary.org/obo/UBERON_0002228) + + +### intermediate sacral crest of sacrum `http://purl.obolibrary.org/obo/UBERON_1200114` + +#### Added +- Class: [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) [label](http://www.w3.org/2000/01/rdf-schema#label) "intermediate sacral crest of sacrum" + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) + +- [intermediate sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200114) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### internal auditory meatus of petrous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200115` + +#### Added +- Class: [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) [label](http://www.w3.org/2000/01/rdf-schema#label) "internal auditory meatus of petrous part of temporal bone" + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [internal auditory meatus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200115) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### internal occipital protuberance of squamous part of occipital bone `http://purl.obolibrary.org/obo/UBERON_1200116` + +#### Added +- Class: [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Occipital_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) [label](http://www.w3.org/2000/01/rdf-schema#label) "internal occipital protuberance of squamous part of occipital bone" + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [internal occipital protuberance of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200116) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) + + +### interosseus border of tibia `http://purl.obolibrary.org/obo/UBERON_1200117` + +#### Added +- Class: [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) [label](http://www.w3.org/2000/01/rdf-schema#label) "interosseus border of tibia" + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [interosseus border of tibia](http://purl.obolibrary.org/obo/UBERON_1200117) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) + + +### interphalangeal joint of manual digit 2 `http://purl.obolibrary.org/obo/UBERON_0007729` +#### Removed +- [interphalangeal joint of manual digit 2](http://purl.obolibrary.org/obo/UBERON_0007729) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [manual digit 2](http://purl.obolibrary.org/obo/UBERON_0003622) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [interphalangeal joint of manual digit 2](http://purl.obolibrary.org/obo/UBERON_0007729) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [manual digit 2](http://purl.obolibrary.org/obo/UBERON_0003622) + + +### intrahepatic bile duct `http://purl.obolibrary.org/obo/UBERON_0003704` +#### Removed +- [intrahepatic bile duct](http://purl.obolibrary.org/obo/UBERON_0003704) SubClassOf [bile duct](http://purl.obolibrary.org/obo/UBERON_0002394) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +- [intrahepatic bile duct](http://purl.obolibrary.org/obo/UBERON_0003704) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [intrahepatic bile duct](http://purl.obolibrary.org/obo/UBERON_0003704) SubClassOf [bile duct](http://purl.obolibrary.org/obo/UBERON_0002394) + +- [intrahepatic bile duct](http://purl.obolibrary.org/obo/UBERON_0003704) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [liver](http://purl.obolibrary.org/obo/UBERON_0002107) + + +### intrinsic muscle of tongue `http://purl.obolibrary.org/obo/UBERON_0001576` +#### Removed +- [intrinsic muscle of tongue](http://purl.obolibrary.org/obo/UBERON_0001576) SubClassOf [RO_0002005](http://purl.obolibrary.org/obo/RO_0002005) some [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FEED" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Wikipedia" + +#### Added +- [intrinsic muscle of tongue](http://purl.obolibrary.org/obo/UBERON_0001576) SubClassOf [RO_0002005](http://purl.obolibrary.org/obo/RO_0002005) some [hypoglossal nerve](http://purl.obolibrary.org/obo/UBERON_0001650) + + +### iris epithelium `http://purl.obolibrary.org/obo/UBERON_0002506` +#### Removed +- [iris epithelium](http://purl.obolibrary.org/obo/UBERON_0002506) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [iris](http://purl.obolibrary.org/obo/UBERON_0001769) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [iris epithelium](http://purl.obolibrary.org/obo/UBERON_0002506) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [iris](http://purl.obolibrary.org/obo/UBERON_0001769) + + +### ischial body of ischium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200118` + +#### Added +- Class: [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) [label](http://www.w3.org/2000/01/rdf-schema#label) "ischial body of ischium of os coxa" + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [ischial body of ischium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200118) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### joint of girdle `http://purl.obolibrary.org/obo/UBERON_0008114` +#### Removed +- [joint of girdle](http://purl.obolibrary.org/obo/UBERON_0008114) SubClassOf [skeletal joint](http://purl.obolibrary.org/obo/UBERON_0000982) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [joint of girdle](http://purl.obolibrary.org/obo/UBERON_0008114) SubClassOf [skeletal joint](http://purl.obolibrary.org/obo/UBERON_0000982) + + +### juvenile stage `http://purl.obolibrary.org/obo/UBERON_0034919` +#### Removed +- [juvenile stage](http://purl.obolibrary.org/obo/UBERON_0034919) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### lacrimal fossa of frontal bone `http://purl.obolibrary.org/obo/UBERON_1200120` + +#### Added +- Class: [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Frontal_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) [label](http://www.w3.org/2000/01/rdf-schema#label) "lacrimal fossa of frontal bone" + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) SubClassOf [cranial fossa](http://purl.obolibrary.org/obo/UBERON_0008789) + +- [lacrimal fossa of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200120) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) + + +### lamina of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200121` + +#### Added +- Class: [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) [label](http://www.w3.org/2000/01/rdf-schema#label) "lamina of first cervical vertebra" + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) SubClassOf [vertebra lamina](http://purl.obolibrary.org/obo/UBERON_0004662) + +- [lamina of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200121) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### lamina of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200122` + +#### Added +- Class: [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) [label](http://www.w3.org/2000/01/rdf-schema#label) "lamina of second cervical vertebra" + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) SubClassOf [vertebra lamina](http://purl.obolibrary.org/obo/UBERON_0004662) + +- [lamina of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200122) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### larval stage `http://purl.obolibrary.org/obo/UBERON_0000069` +#### Removed +- [larval stage](http://purl.obolibrary.org/obo/UBERON_0000069) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### late adult stage `http://purl.obolibrary.org/obo/UBERON_0007222` +#### Removed +- [late adult stage](http://purl.obolibrary.org/obo/UBERON_0007222) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### late embryonic stage `http://purl.obolibrary.org/obo/UBERON_0007220` +#### Removed +- [late embryonic stage](http://purl.obolibrary.org/obo/UBERON_0007220) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### lateral line sense organ `http://purl.obolibrary.org/obo/UBERON_0035555` +#### Removed +- [lateral line sense organ](http://purl.obolibrary.org/obo/UBERON_0035555) EquivalentTo [organ](http://purl.obolibrary.org/obo/UBERON_0000062) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lateral line system](http://purl.obolibrary.org/obo/UBERON_0002540)) and ([RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050964](http://purl.obolibrary.org/obo/GO_0050964)) + +#### Added +- [lateral line sense organ](http://purl.obolibrary.org/obo/UBERON_0035555) EquivalentTo [organ](http://purl.obolibrary.org/obo/UBERON_0000062) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lateral line system](http://purl.obolibrary.org/obo/UBERON_0002540)) and ([RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0050956](http://purl.obolibrary.org/obo/GO_0050956)) + + +### lateral process of tuberosity of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200123` + +#### Added +- Class: [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) [label](http://www.w3.org/2000/01/rdf-schema#label) "lateral process of tuberosity of calcaneus" + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [lateral process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200123) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) + + +### lateral reticular nucleus `http://purl.obolibrary.org/obo/UBERON_0002154` +#### Removed +- [lateral reticular nucleus](http://purl.obolibrary.org/obo/UBERON_0002154) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lateral medullary reticular complex](http://purl.obolibrary.org/obo/UBERON_0009775) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [lateral reticular nucleus](http://purl.obolibrary.org/obo/UBERON_0002154) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lateral medullary reticular complex](http://purl.obolibrary.org/obo/UBERON_0009775) + + +### lateral sacral crest of sacrum `http://purl.obolibrary.org/obo/UBERON_1200125` + +#### Added +- Class: [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) [label](http://www.w3.org/2000/01/rdf-schema#label) "lateral sacral crest of sacrum" + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) + +- [lateral sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200125) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### left clavicle `http://purl.obolibrary.org/obo/UBERON_0008256` +#### Removed +- [left clavicle](http://purl.obolibrary.org/obo/UBERON_0008256) SubClassOf [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [left clavicle](http://purl.obolibrary.org/obo/UBERON_0008256) SubClassOf [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) + + +### left hepatic artery `http://purl.obolibrary.org/obo/UBERON_0015481` +#### Removed +- [left hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015481) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [left hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015481) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [left lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001115) + + +### left ovarian vein `http://purl.obolibrary.org/obo/UBERON_0039857` +#### Removed +- [left ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039857) SubClassOf [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [left ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039857) SubClassOf [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) + + +### lesser wings of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200126` + +#### Added +- Class: [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) [label](http://www.w3.org/2000/01/rdf-schema#label) "lesser wings of sphenoid bone" + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [lesser wings of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200126) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) + + +### life cycle `http://purl.obolibrary.org/obo/UBERON_0000104` +#### Removed +- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + +- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) SubClassOf [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) + +#### Added +- [life cycle](http://purl.obolibrary.org/obo/UBERON_0000104) SubClassOf [BFO_0000015](http://purl.obolibrary.org/obo/BFO_0000015) + + +### life cycle stage `http://purl.obolibrary.org/obo/UBERON_0000105` +#### Removed +- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) SubClassOf [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) + +#### Added +- [life cycle stage](http://purl.obolibrary.org/obo/UBERON_0000105) SubClassOf [BFO_0000015](http://purl.obolibrary.org/obo/BFO_0000015) + + +### life cycle temporal boundary `http://purl.obolibrary.org/obo/UBERON_0035943` +#### Removed +- [life cycle temporal boundary](http://purl.obolibrary.org/obo/UBERON_0035943) SubClassOf [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) + +#### Added +- [life cycle temporal boundary](http://purl.obolibrary.org/obo/UBERON_0035943) SubClassOf [BFO_0000001](http://purl.obolibrary.org/obo/BFO_0000001) + + +### ligamentum arteriosum `http://purl.obolibrary.org/obo/UBERON_0007642` +#### Removed +- [ligamentum arteriosum](http://purl.obolibrary.org/obo/UBERON_0007642) SubClassOf [transformed artery](http://purl.obolibrary.org/obo/UBERON_0006591) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [ligamentum arteriosum](http://purl.obolibrary.org/obo/UBERON_0007642) SubClassOf [transformed artery](http://purl.obolibrary.org/obo/UBERON_0006591) + + +### linea terminalis of sacrum `http://purl.obolibrary.org/obo/UBERON_1200127` + +#### Added +- Class: [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) [label](http://www.w3.org/2000/01/rdf-schema#label) "linea terminalis of sacrum" + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [linea terminalis of sacrum](http://purl.obolibrary.org/obo/UBERON_1200127) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### liver primordium `http://purl.obolibrary.org/obo/UBERON_0003894` +#### Removed +- [liver primordium](http://purl.obolibrary.org/obo/UBERON_0003894) SubClassOf [primordium](http://purl.obolibrary.org/obo/UBERON_0001048) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "XAO" + +#### Added +- [liver primordium](http://purl.obolibrary.org/obo/UBERON_0003894) SubClassOf [primordium](http://purl.obolibrary.org/obo/UBERON_0001048) + + +### lower back muscle `http://purl.obolibrary.org/obo/UBERON_0008242` +#### Removed +- [lower back muscle](http://purl.obolibrary.org/obo/UBERON_0008242) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lower back](http://purl.obolibrary.org/obo/UBERON_0005462) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [lower back muscle](http://purl.obolibrary.org/obo/UBERON_0008242) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lower back](http://purl.obolibrary.org/obo/UBERON_0005462) + + +### lower lobe of left lung `http://purl.obolibrary.org/obo/UBERON_0008953` +#### Removed +- [lower lobe of left lung](http://purl.obolibrary.org/obo/UBERON_0008953) SubClassOf [lower lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008949) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [lower lobe of left lung](http://purl.obolibrary.org/obo/UBERON_0008953) SubClassOf [lower lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008949) + + +### lower lobe of right lung `http://purl.obolibrary.org/obo/UBERON_0002171` +#### Removed +- [lower lobe of right lung](http://purl.obolibrary.org/obo/UBERON_0002171) SubClassOf [lower lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008949) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [lower lobe of right lung](http://purl.obolibrary.org/obo/UBERON_0002171) SubClassOf [lower lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008949) + + +### lumbar division of spinal cord central canal `http://purl.obolibrary.org/obo/UBERON_0014543` +#### Removed +- [lumbar division of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014543) SubClassOf [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "NIFSTD" + +#### Added +- [lumbar division of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014543) SubClassOf [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) + + +### lumbar region of vertebral column `http://purl.obolibrary.org/obo/UBERON_0006074` +#### Removed +- [lumbar region of vertebral column](http://purl.obolibrary.org/obo/UBERON_0006074) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lower back](http://purl.obolibrary.org/obo/UBERON_0005462) + + + +### lunate surface of os coxa `http://purl.obolibrary.org/obo/UBERON_1200128` + +#### Added +- Class: [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) [label](http://www.w3.org/2000/01/rdf-schema#label) "lunate surface of os coxa" + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [lunate surface of os coxa](http://purl.obolibrary.org/obo/UBERON_1200128) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### lung parenchyma `http://purl.obolibrary.org/obo/UBERON_0008946` +#### Removed +- [lung parenchyma](http://purl.obolibrary.org/obo/UBERON_0008946) SubClassOf [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +- [lung parenchyma](http://purl.obolibrary.org/obo/UBERON_0008946) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [lung parenchyma](http://purl.obolibrary.org/obo/UBERON_0008946) SubClassOf [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) + +- [lung parenchyma](http://purl.obolibrary.org/obo/UBERON_0008946) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lung](http://purl.obolibrary.org/obo/UBERON_0002048) + + +### male paramesonephric duct `http://purl.obolibrary.org/obo/UBERON_0013247` +#### Removed +- [male paramesonephric duct](http://purl.obolibrary.org/obo/UBERON_0013247) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male reproductive system](http://purl.obolibrary.org/obo/UBERON_0000079) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +- [male paramesonephric duct](http://purl.obolibrary.org/obo/UBERON_0013247) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [Mullerian duct](http://purl.obolibrary.org/obo/UBERON_0003890) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [male paramesonephric duct](http://purl.obolibrary.org/obo/UBERON_0013247) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male reproductive system](http://purl.obolibrary.org/obo/UBERON_0000079) + +- [male paramesonephric duct](http://purl.obolibrary.org/obo/UBERON_0013247) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [Mullerian duct](http://purl.obolibrary.org/obo/UBERON_0003890) + + +### mammillary process of fifth lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200129` + +#### Added +- Class: [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) [label](http://www.w3.org/2000/01/rdf-schema#label) "mammillary process of fifth lumbar vertebra" + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [mammillary process of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200129) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004621) + + +### mammillary process of first lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200130` + +#### Added +- Class: [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) [label](http://www.w3.org/2000/01/rdf-schema#label) "mammillary process of first lumbar vertebra" + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [mammillary process of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200130) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004617) + + +### mammillary process of fourth lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200131` + +#### Added +- Class: [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) [label](http://www.w3.org/2000/01/rdf-schema#label) "mammillary process of fourth lumbar vertebra" + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [mammillary process of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200131) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004620) + + +### mammillary process of second lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200132` + +#### Added +- Class: [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) [label](http://www.w3.org/2000/01/rdf-schema#label) "mammillary process of second lumbar vertebra" + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [mammillary process of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200132) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004618) + + +### mammillary process of third lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200133` + +#### Added +- Class: [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) [label](http://www.w3.org/2000/01/rdf-schema#label) "mammillary process of third lumbar vertebra" + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [mammillary process of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200133) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004619) + + +### mandibular angle of mandible `http://purl.obolibrary.org/obo/UBERON_1200134` + +#### Added +- Class: [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) [label](http://www.w3.org/2000/01/rdf-schema#label) "mandibular angle of mandible" + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [mandibular angle of mandible](http://purl.obolibrary.org/obo/UBERON_1200134) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### mandibular foramen of mandible `http://purl.obolibrary.org/obo/UBERON_1200135` + +#### Added +- Class: [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) [label](http://www.w3.org/2000/01/rdf-schema#label) "mandibular foramen of mandible" + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) SubClassOf [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) + +- [mandibular foramen of mandible](http://purl.obolibrary.org/obo/UBERON_1200135) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### mandibular fossa of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200136` + +#### Added +- Class: [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) [label](http://www.w3.org/2000/01/rdf-schema#label) "mandibular fossa of squamous part of temporal bone" + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [mandibular fossa of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200136) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### mandibular notch of mandible `http://purl.obolibrary.org/obo/UBERON_1200137` + +#### Added +- Class: [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) [label](http://www.w3.org/2000/01/rdf-schema#label) "mandibular notch of mandible" + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) SubClassOf [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) + +- [mandibular notch of mandible](http://purl.obolibrary.org/obo/UBERON_1200137) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### mandibular process mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010337` +#### Removed +- [mandibular process mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010337) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandibular process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0006905) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [mandibular process mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010337) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandibular process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0006905) + + +### mandibular process mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010336` +#### Removed +- [mandibular process mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010336) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandibular process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0006905) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [mandibular process mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010336) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandibular process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0006905) + + +### mastoid foramen of mastoid part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200138` + +#### Added +- Class: [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) [label](http://www.w3.org/2000/01/rdf-schema#label) "mastoid foramen of mastoid part of temporal bone" + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [mastoid foramen of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200138) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### mastoid notch of mastoid part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200139` + +#### Added +- Class: [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) [label](http://www.w3.org/2000/01/rdf-schema#label) "mastoid notch of mastoid part of temporal bone" + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [mastoid notch of mastoid part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200139) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### material anatomical entity `http://purl.obolibrary.org/obo/UBERON_0000465` + +#### Added +- [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) EquivalentTo [CL_0000000](http://purl.obolibrary.org/obo/CL_0000000) or [COB_0000021](http://purl.obolibrary.org/obo/COB_0000021) or [COB_0000022](http://purl.obolibrary.org/obo/COB_0000022) or [GO_0110165](http://purl.obolibrary.org/obo/GO_0110165) + + +### maxillary process mesenchyme from head mesenchyme `http://purl.obolibrary.org/obo/UBERON_0010335` +#### Removed +- [maxillary process mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010335) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxillary process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009526) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [maxillary process mesenchyme from head mesenchyme](http://purl.obolibrary.org/obo/UBERON_0010335) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxillary process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009526) + + +### maxillary process mesenchyme from neural crest `http://purl.obolibrary.org/obo/UBERON_0010334` +#### Removed +- [maxillary process mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010334) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxillary process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009526) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [maxillary process mesenchyme from neural crest](http://purl.obolibrary.org/obo/UBERON_0010334) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxillary process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009526) + + +### medial malleolus of tibia `http://purl.obolibrary.org/obo/UBERON_1200140` + +#### Added +- Class: [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) [label](http://www.w3.org/2000/01/rdf-schema#label) "medial malleolus of tibia" + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [medial malleolus of tibia](http://purl.obolibrary.org/obo/UBERON_1200140) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) + + +### medial nasal process mesenchyme `http://purl.obolibrary.org/obo/UBERON_0009204` +#### Removed +- [medial nasal process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009204) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [medial nasal prominence](http://purl.obolibrary.org/obo/UBERON_0004068) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [medial nasal process mesenchyme](http://purl.obolibrary.org/obo/UBERON_0009204) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [medial nasal prominence](http://purl.obolibrary.org/obo/UBERON_0004068) + + +### medial process of tuberosity of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200141` + +#### Added +- Class: [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) [label](http://www.w3.org/2000/01/rdf-schema#label) "medial process of tuberosity of calcaneus" + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [medial process of tuberosity of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200141) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) + + +### medial pterygoid plate of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200142` + +#### Added +- Class: [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) [label](http://www.w3.org/2000/01/rdf-schema#label) "medial pterygoid plate of sphenoid bone" + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [medial pterygoid plate of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200142) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) + + +### median sacral crest of sacrum `http://purl.obolibrary.org/obo/UBERON_1200143` + +#### Added +- Class: [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) [label](http://www.w3.org/2000/01/rdf-schema#label) "median sacral crest of sacrum" + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) + +- [median sacral crest of sacrum](http://purl.obolibrary.org/obo/UBERON_1200143) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### median vaginal canal `http://purl.obolibrary.org/obo/UBERON_0013524` +#### Removed +- [median vaginal canal](http://purl.obolibrary.org/obo/UBERON_0013524) SubClassOf [anatomical conduit](http://purl.obolibrary.org/obo/UBERON_0004111) + +- [median vaginal canal](http://purl.obolibrary.org/obo/UBERON_0013524) SubClassOf [channel for](http://purl.obolibrary.org/obo/uberon/core#channel_for) some [embryo](http://purl.obolibrary.org/obo/UBERON_0000922) + + + +### mental protuberance of mandible `http://purl.obolibrary.org/obo/UBERON_1200144` + +#### Added +- Class: [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) [label](http://www.w3.org/2000/01/rdf-schema#label) "mental protuberance of mandible" + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [mental protuberance of mandible](http://purl.obolibrary.org/obo/UBERON_1200144) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### mentalis muscle `http://purl.obolibrary.org/obo/UBERON_0008596` +#### Removed +- [mentalis muscle](http://purl.obolibrary.org/obo/UBERON_0008596) SubClassOf [facial muscle](http://purl.obolibrary.org/obo/UBERON_0001577) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MFMO" + +#### Added +- [mentalis muscle](http://purl.obolibrary.org/obo/UBERON_0008596) SubClassOf [facial muscle](http://purl.obolibrary.org/obo/UBERON_0001577) + + +### mesenchyme of interdigital region between manual digits 1 and 2 `http://purl.obolibrary.org/obo/UBERON_0009586` +#### Removed +- [mesenchyme of interdigital region between manual digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0009586) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0006026) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between manual digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0009586) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0006026) + + +### mesenchyme of interdigital region between manual digits 2 and 3 `http://purl.obolibrary.org/obo/UBERON_0009587` +#### Removed +- [mesenchyme of interdigital region between manual digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0009587) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0006029) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between manual digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0009587) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0006029) + + +### mesenchyme of interdigital region between manual digits 3 and 4 `http://purl.obolibrary.org/obo/UBERON_0009588` +#### Removed +- [mesenchyme of interdigital region between manual digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0009588) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0006032) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between manual digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0009588) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0006032) + + +### mesenchyme of interdigital region between manual digits 4 and 5 `http://purl.obolibrary.org/obo/UBERON_0009589` +#### Removed +- [mesenchyme of interdigital region between manual digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0009589) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0006035) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between manual digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0009589) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between manual digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0006035) + + +### mesenchyme of interdigital region between pedal digits 1 and 2 `http://purl.obolibrary.org/obo/UBERON_0009590` +#### Removed +- [mesenchyme of interdigital region between pedal digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0009590) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0006038) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between pedal digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0009590) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 1 and 2](http://purl.obolibrary.org/obo/UBERON_0006038) + + +### mesenchyme of interdigital region between pedal digits 2 and 3 `http://purl.obolibrary.org/obo/UBERON_0009591` +#### Removed +- [mesenchyme of interdigital region between pedal digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0009591) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0006041) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between pedal digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0009591) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 2 and 3](http://purl.obolibrary.org/obo/UBERON_0006041) + + +### mesenchyme of interdigital region between pedal digits 3 and 4 `http://purl.obolibrary.org/obo/UBERON_0009592` +#### Removed +- [mesenchyme of interdigital region between pedal digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0009592) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0006044) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between pedal digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0009592) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 3 and 4](http://purl.obolibrary.org/obo/UBERON_0006044) + + +### mesenchyme of interdigital region between pedal digits 4 and 5 `http://purl.obolibrary.org/obo/UBERON_0009593` +#### Removed +- [mesenchyme of interdigital region between pedal digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0009593) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0006047) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EMAPA" + +#### Added +- [mesenchyme of interdigital region between pedal digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0009593) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [interdigital region between pedal digits 4 and 5](http://purl.obolibrary.org/obo/UBERON_0006047) + + +### mesenchyme of vomeronasal organ `http://purl.obolibrary.org/obo/UBERON_0003421` +#### Removed +- [mesenchyme of vomeronasal organ](http://purl.obolibrary.org/obo/UBERON_0003421) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vomeronasal organ](http://purl.obolibrary.org/obo/UBERON_0002255) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [mesenchyme of vomeronasal organ](http://purl.obolibrary.org/obo/UBERON_0003421) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vomeronasal organ](http://purl.obolibrary.org/obo/UBERON_0002255) + + +### mesentery of stomach `http://purl.obolibrary.org/obo/UBERON_0003281` +#### Removed +- [mesentery of stomach](http://purl.obolibrary.org/obo/UBERON_0003281) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomach](http://purl.obolibrary.org/obo/UBERON_0000945) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [mesentery of stomach](http://purl.obolibrary.org/obo/UBERON_0003281) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [stomach](http://purl.obolibrary.org/obo/UBERON_0000945) + + +### metanephros cortex `http://purl.obolibrary.org/obo/UBERON_0010533` +#### Removed +- [metanephros cortex](http://purl.obolibrary.org/obo/UBERON_0010533) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [metanephros](http://purl.obolibrary.org/obo/UBERON_0000081) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VHOG" + +#### Added +- [metanephros cortex](http://purl.obolibrary.org/obo/UBERON_0010533) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [metanephros](http://purl.obolibrary.org/obo/UBERON_0000081) + + +### midbrain-hindbrain boundary `http://purl.obolibrary.org/obo/UBERON_0003052` +#### Removed +- [midbrain-hindbrain boundary](http://purl.obolibrary.org/obo/UBERON_0003052) SubClassOf [anatomical junction](http://purl.obolibrary.org/obo/UBERON_0007651) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/106/" + + - [inconsistent_with](http://www.geneontology.org/formats/oboInOwl#inconsistent_with) "ZFA" + +#### Added +- [midbrain-hindbrain boundary](http://purl.obolibrary.org/obo/UBERON_0003052) SubClassOf [anatomical junction](http://purl.obolibrary.org/obo/UBERON_0007651) + + +### mouth `http://purl.obolibrary.org/obo/UBERON_0000165` +#### Removed +- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) SubClassOf [subdivision of digestive tract](http://purl.obolibrary.org/obo/UBERON_0004921) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts" + +#### Added +- [mouth](http://purl.obolibrary.org/obo/UBERON_0000165) SubClassOf [subdivision of digestive tract](http://purl.obolibrary.org/obo/UBERON_0004921) + + +### mylohyoid groove of mandible `http://purl.obolibrary.org/obo/UBERON_1200145` + +#### Added +- Class: [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) [label](http://www.w3.org/2000/01/rdf-schema#label) "mylohyoid groove of mandible" + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) + +- [mylohyoid groove of mandible](http://purl.obolibrary.org/obo/UBERON_1200145) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### mylohyoid line of mandible `http://purl.obolibrary.org/obo/UBERON_1200146` + +#### Added +- Class: [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) [label](http://www.w3.org/2000/01/rdf-schema#label) "mylohyoid line of mandible" + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [mylohyoid line of mandible](http://purl.obolibrary.org/obo/UBERON_1200146) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### nasal notch `http://purl.obolibrary.org/obo/UBERON_8500006` + +#### Added +- Class: [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0001-8415-4848" + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nasoincisive notch" + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8500006" + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Anatomical point of cranium between nasal process of premaxilla and nasal bone, at the anteriormost end of the suture." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "isbn:9783830410690" + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) [label](http://www.w3.org/2000/01/rdf-schema#label) "nasal notch" + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) SubClassOf [anatomical point](http://purl.obolibrary.org/obo/UBERON_0006983) + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [nasal bone](http://purl.obolibrary.org/obo/UBERON_0001681) + +- [nasal notch](http://purl.obolibrary.org/obo/UBERON_8500006) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [premaxilla](http://purl.obolibrary.org/obo/UBERON_0002244) + + +### nasolacrimal canal of maxilla `http://purl.obolibrary.org/obo/UBERON_1200147` + +#### Added +- Class: [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Maxilla" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) [label](http://www.w3.org/2000/01/rdf-schema#label) "nasolacrimal canal of maxilla" + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) SubClassOf [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) + +- [nasolacrimal canal of maxilla](http://purl.obolibrary.org/obo/UBERON_1200147) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [maxilla](http://purl.obolibrary.org/obo/UBERON_0002397) + + +### nauplius stage `http://purl.obolibrary.org/obo/UBERON_0014406` +#### Removed +- [nauplius stage](http://purl.obolibrary.org/obo/UBERON_0014406) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### neck of radius of radius `http://purl.obolibrary.org/obo/UBERON_1200148` + +#### Added +- Class: [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Radius_(bone)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) [label](http://www.w3.org/2000/01/rdf-schema#label) "neck of radius of radius" + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [neck of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200148) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [radius bone](http://purl.obolibrary.org/obo/UBERON_0001423) + + +### neonate stage `http://purl.obolibrary.org/obo/UBERON_0007221` +#### Removed +- [neonate stage](http://purl.obolibrary.org/obo/UBERON_0007221) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### nephridium `http://purl.obolibrary.org/obo/UBERON_0006972` + +#### Added +- [nephridium](http://purl.obolibrary.org/obo/UBERON_0006972) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "nephridia" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0002-6601-2165" + + - [hasSynonymType](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003004](http://purl.obolibrary.org/obo/OMO_0003004) + + +### nerve root `http://purl.obolibrary.org/obo/UBERON_0002211` +#### Removed +- [nerve root](http://purl.obolibrary.org/obo/UBERON_0002211) [external_definition](http://purl.obolibrary.org/obo/UBPROP_0000001) "The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, FBC:DOS]." + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FBbt:00007602, FBC:DOS" + +#### Added +- [nerve root](http://purl.obolibrary.org/obo/UBERON_0002211) [external_definition](http://purl.obolibrary.org/obo/UBPROP_0000001) "The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, https://orcid.org/0000-0002-7073-9172]." + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FBbt:00007602, https://orcid.org/0000-0002-7073-9172" + + +### neuron projection bundle `http://purl.obolibrary.org/obo/UBERON_0000122` +#### Removed +- [neuron projection bundle](http://purl.obolibrary.org/obo/UBERON_0000122) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:0001001" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00005099" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + +#### Added +- [neuron projection bundle](http://purl.obolibrary.org/obo/UBERON_0000122) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:0001001" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00005099" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### neurula stage `http://purl.obolibrary.org/obo/UBERON_0000110` +#### Removed +- [neurula stage](http://purl.obolibrary.org/obo/UBERON_0000110) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### non-articular facet of tubercle of eighth rib `http://purl.obolibrary.org/obo/UBERON_1200149` + +#### Added +- Class: [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of eighth rib" + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200149) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 8](http://purl.obolibrary.org/obo/UBERON_0010757) + + +### non-articular facet of tubercle of fifth rib `http://purl.obolibrary.org/obo/UBERON_1200150` + +#### Added +- Class: [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of fifth rib" + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200150) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 5](http://purl.obolibrary.org/obo/UBERON_0004605) + + +### non-articular facet of tubercle of first rib `http://purl.obolibrary.org/obo/UBERON_1200151` + +#### Added +- Class: [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of first rib" + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200151) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) + + +### non-articular facet of tubercle of fourth rib `http://purl.obolibrary.org/obo/UBERON_1200152` + +#### Added +- Class: [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of fourth rib" + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200152) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 4](http://purl.obolibrary.org/obo/UBERON_0004604) + + +### non-articular facet of tubercle of ninth rib `http://purl.obolibrary.org/obo/UBERON_1200153` + +#### Added +- Class: [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of ninth rib" + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200153) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 9](http://purl.obolibrary.org/obo/UBERON_0004608) + + +### non-articular facet of tubercle of second rib `http://purl.obolibrary.org/obo/UBERON_1200154` + +#### Added +- Class: [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of second rib" + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of second rib](http://purl.obolibrary.org/obo/UBERON_1200154) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 2](http://purl.obolibrary.org/obo/UBERON_0004602) + + +### non-articular facet of tubercle of seventh rib `http://purl.obolibrary.org/obo/UBERON_1200155` + +#### Added +- Class: [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of seventh rib" + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200155) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 7](http://purl.obolibrary.org/obo/UBERON_0004607) + + +### non-articular facet of tubercle of sixth rib `http://purl.obolibrary.org/obo/UBERON_1200156` + +#### Added +- Class: [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of sixth rib" + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200156) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 6](http://purl.obolibrary.org/obo/UBERON_0004606) + + +### non-articular facet of tubercle of tenth rib `http://purl.obolibrary.org/obo/UBERON_1200157` + +#### Added +- Class: [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of tenth rib" + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200157) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 10](http://purl.obolibrary.org/obo/UBERON_0004609) + + +### non-articular facet of tubercle of third rib `http://purl.obolibrary.org/obo/UBERON_1200158` + +#### Added +- Class: [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) [label](http://www.w3.org/2000/01/rdf-schema#label) "non-articular facet of tubercle of third rib" + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [non-articular facet of tubercle of third rib](http://purl.obolibrary.org/obo/UBERON_1200158) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 3](http://purl.obolibrary.org/obo/UBERON_0004603) + + +### non-connected functional system `http://purl.obolibrary.org/obo/UBERON_0015203` +#### Removed +- [non-connected functional system](http://purl.obolibrary.org/obo/UBERON_0015203) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An anatomical group whose component structures share a common function." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00007278" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBC:DOS" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AEO:JB" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AEO:0000093" + +#### Added +- [non-connected functional system](http://purl.obolibrary.org/obo/UBERON_0015203) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An anatomical group whose component structures share a common function." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FBbt:00007278" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AEO:JB" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "AEO:0000093" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### nursing stage `http://purl.obolibrary.org/obo/UBERON_0018685` +#### Removed +- [nursing stage](http://purl.obolibrary.org/obo/UBERON_0018685) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### obliquely striated somatic muscle `http://purl.obolibrary.org/obo/UBERON_0014897` +#### Removed +- [obliquely striated somatic muscle](http://purl.obolibrary.org/obo/UBERON_0014897) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A somatic muscle that consists of one or more obliquely striated muscle cells and any associated extracellular structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:DOS" + +#### Added +- [obliquely striated somatic muscle](http://purl.obolibrary.org/obo/UBERON_0014897) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A somatic muscle that consists of one or more obliquely striated muscle cells and any associated extracellular structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### obsolete processual entity `http://purl.obolibrary.org/obo/UBERON_0000000` +#### Removed +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_33090](http://purl.obolibrary.org/obo/NCBITaxon_33090) + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_33208](http://purl.obolibrary.org/obo/NCBITaxon_33208) + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_4751](http://purl.obolibrary.org/obo/NCBITaxon_4751) + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BFO:0000003" + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [common_anatomy](http://purl.obolibrary.org/obo/uberon/core#common_anatomy) + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [upper_level](http://purl.obolibrary.org/obo/uberon/core#upper_level) + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "span:ProcessualEntity" + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "This term is being aligned with COB" + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [label](http://www.w3.org/2000/01/rdf-schema#label) "processual entity" + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) DisjointWith [anatomical entity](http://purl.obolibrary.org/obo/UBERON_0001062) + +#### Added +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "OBSOLETE: An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "span:ProcessualEntity" + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [deprecated](http://www.w3.org/2002/07/owl#deprecated) true + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [comment](http://www.w3.org/2000/01/rdf-schema#comment) ""This term has been deprecated in favour of BFO:0000015 ('process' in COB)"" + +- [obsolete processual entity](http://purl.obolibrary.org/obo/UBERON_0000000) [label](http://www.w3.org/2000/01/rdf-schema#label) "obsolete processual entity" + + +### obturator groove of pubis of os coxa `http://purl.obolibrary.org/obo/UBERON_1200160` + +#### Added +- Class: [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) [label](http://www.w3.org/2000/01/rdf-schema#label) "obturator groove of pubis of os coxa" + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) + +- [obturator groove of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200160) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### occipital pole `http://purl.obolibrary.org/obo/UBERON_0002902` +#### Removed +- [occipital pole](http://purl.obolibrary.org/obo/UBERON_0002902) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [occipital lobe](http://purl.obolibrary.org/obo/UBERON_0002021) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [occipital pole](http://purl.obolibrary.org/obo/UBERON_0002902) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [occipital lobe](http://purl.obolibrary.org/obo/UBERON_0002021) + + +### olfactory foramina of ethmoid bone `http://purl.obolibrary.org/obo/UBERON_1200164` + +#### Added +- Class: [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ethmoid_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) [label](http://www.w3.org/2000/01/rdf-schema#label) "olfactory foramina of ethmoid bone" + +- [olfactory foramina of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200164) SubClassOf [ethmoid foramen](http://purl.obolibrary.org/obo/UBERON_0018415) + + +### olfactory nerve `http://purl.obolibrary.org/obo/UBERON_0001579` +#### Removed +- [olfactory nerve](http://purl.obolibrary.org/obo/UBERON_0001579) SubClassOf [RO_0002134](http://purl.obolibrary.org/obo/RO_0002134) some [olfactory epithelium](http://purl.obolibrary.org/obo/UBERON_0001997) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ISBN:0471888893" + +#### Added +- [olfactory nerve](http://purl.obolibrary.org/obo/UBERON_0001579) SubClassOf [RO_0002134](http://purl.obolibrary.org/obo/RO_0002134) some [olfactory epithelium](http://purl.obolibrary.org/obo/UBERON_0001997) + + +### organism subdivision `http://purl.obolibrary.org/obo/UBERON_0000475` +#### Removed +- [organism subdivision](http://purl.obolibrary.org/obo/UBERON_0000475) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0001-9114-8737" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:0000032" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:DOS" + +#### Added +- [organism subdivision](http://purl.obolibrary.org/obo/UBERON_0000475) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "http://orcid.org/0000-0001-9114-8737" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "CARO:0000032" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### organism substance `http://purl.obolibrary.org/obo/UBERON_0000463` +#### Removed +- [organism substance](http://purl.obolibrary.org/obo/UBERON_0000463) SubClassOf [material anatomical entity](http://purl.obolibrary.org/obo/UBERON_0000465) + +#### Added +- [organism substance](http://purl.obolibrary.org/obo/UBERON_0000463) DisjointWith [multicellular organism](http://purl.obolibrary.org/obo/UBERON_0000468) + +- [organism substance](http://purl.obolibrary.org/obo/UBERON_0000463) SubClassOf [gross anatomical part](http://purl.obolibrary.org/obo/UBERON_0000001) + + +### organogenesis stage `http://purl.obolibrary.org/obo/UBERON_0000111` +#### Removed +- [organogenesis stage](http://purl.obolibrary.org/obo/UBERON_0000111) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### outer renal medulla interstitium `http://purl.obolibrary.org/obo/UBERON_0005213` +#### Removed +- [outer renal medulla interstitium](http://purl.obolibrary.org/obo/UBERON_0005213) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [outer medulla of kidney](http://purl.obolibrary.org/obo/UBERON_0001293) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [outer renal medulla interstitium](http://purl.obolibrary.org/obo/UBERON_0005213) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [outer medulla of kidney](http://purl.obolibrary.org/obo/UBERON_0001293) + + +### pair of lungs `http://purl.obolibrary.org/obo/UBERON_0000170` +#### Removed +- [pair of lungs](http://purl.obolibrary.org/obo/UBERON_0000170) SubClassOf [RO_0002351](http://purl.obolibrary.org/obo/RO_0002351) exactly 1 [right lung](http://purl.obolibrary.org/obo/UBERON_0002167) + +- [pair of lungs](http://purl.obolibrary.org/obo/UBERON_0000170) SubClassOf [RO_0002351](http://purl.obolibrary.org/obo/RO_0002351) exactly 1 [left lung](http://purl.obolibrary.org/obo/UBERON_0002168) + + + +### paired limb/fin `http://purl.obolibrary.org/obo/UBERON_0004708` +#### Removed +- [paired limb/fin](http://purl.obolibrary.org/obo/UBERON_0004708) SubClassOf [appendage](http://purl.obolibrary.org/obo/UBERON_0000026) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VSAO" + +- [paired limb/fin](http://purl.obolibrary.org/obo/UBERON_0004708) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [appendage girdle complex](http://purl.obolibrary.org/obo/UBERON_0010707) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "VSAO" + +#### Added +- [paired limb/fin](http://purl.obolibrary.org/obo/UBERON_0004708) SubClassOf [appendage](http://purl.obolibrary.org/obo/UBERON_0000026) + +- [paired limb/fin](http://purl.obolibrary.org/obo/UBERON_0004708) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [appendage girdle complex](http://purl.obolibrary.org/obo/UBERON_0010707) + + +### parotid gland ducto-acinar unit `http://purl.obolibrary.org/obo/UBERON_8000011` + +#### Added +- Class: [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3657"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "parotid gland ducto-acinar" + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8000011" + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A salivary gland ducto-acinar unit that is part of the parotid gland, consisting of purely serous acini together with their contiguous intercalated and striated ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a watery, protein-rich serous saliva." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30855909" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:24862590" + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) [label](http://www.w3.org/2000/01/rdf-schema#label) "parotid gland ducto-acinar unit" + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) SubClassOf [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) + +- [parotid gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000011) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [parotid gland](http://purl.obolibrary.org/obo/UBERON_0001831) + + +### pecten pubis of pubis of os coxa `http://purl.obolibrary.org/obo/UBERON_1200166` + +#### Added +- Class: [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) [label](http://www.w3.org/2000/01/rdf-schema#label) "pecten pubis of pubis of os coxa" + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [pecten pubis of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200166) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### pectinal line of femur `http://purl.obolibrary.org/obo/UBERON_1200167` + +#### Added +- Class: [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Femur" + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) [label](http://www.w3.org/2000/01/rdf-schema#label) "pectinal line of femur" + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [pectinal line of femur](http://purl.obolibrary.org/obo/UBERON_1200167) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [femur](http://purl.obolibrary.org/obo/UBERON_0000981) + + +### pedicle of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200168` + +#### Added +- Class: [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) [label](http://www.w3.org/2000/01/rdf-schema#label) "pedicle of first cervical vertebra" + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) SubClassOf [pedicle of vertebra](http://purl.obolibrary.org/obo/UBERON_0001078) + +- [pedicle of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200168) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### pedicle of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200169` + +#### Added +- Class: [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) [label](http://www.w3.org/2000/01/rdf-schema#label) "pedicle of second cervical vertebra" + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) SubClassOf [pedicle of vertebra](http://purl.obolibrary.org/obo/UBERON_0001078) + +- [pedicle of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200169) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### periodontal ligament `http://purl.obolibrary.org/obo/UBERON_0008266` +#### Removed +- [periodontal ligament](http://purl.obolibrary.org/obo/UBERON_0008266) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [periodontium](http://purl.obolibrary.org/obo/UBERON_0001758) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [periodontal ligament](http://purl.obolibrary.org/obo/UBERON_0008266) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [periodontium](http://purl.obolibrary.org/obo/UBERON_0001758) + + +### perpendicular plate of ethmoid bone `http://purl.obolibrary.org/obo/UBERON_1200170` + +#### Added +- Class: [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ethmoid_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) [label](http://www.w3.org/2000/01/rdf-schema#label) "perpendicular plate of ethmoid bone" + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [perpendicular plate of ethmoid bone](http://purl.obolibrary.org/obo/UBERON_1200170) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ethmoid bone](http://purl.obolibrary.org/obo/UBERON_0001679) + + +### petrotympanic fissure of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200171` + +#### Added +- Class: [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) [label](http://www.w3.org/2000/01/rdf-schema#label) "petrotympanic fissure of squamous part of temporal bone" + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [petrotympanic fissure of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200171) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### pharyngeal arch cartilage `http://purl.obolibrary.org/obo/UBERON_0011004` +#### Removed +- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [splanchnocranium](http://purl.obolibrary.org/obo/UBERON_0008895) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" + +#### Added +- [pharyngeal arch cartilage](http://purl.obolibrary.org/obo/UBERON_0011004) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [splanchnocranium](http://purl.obolibrary.org/obo/UBERON_0008895) + + +### pharyngeal epithelium `http://purl.obolibrary.org/obo/UBERON_0003351` +#### Removed +- [pharyngeal epithelium](http://purl.obolibrary.org/obo/UBERON_0003351) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [chordate pharynx](http://purl.obolibrary.org/obo/UBERON_0001042) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" + +#### Added +- [pharyngeal epithelium](http://purl.obolibrary.org/obo/UBERON_0003351) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [chordate pharynx](http://purl.obolibrary.org/obo/UBERON_0001042) + + +### pharyngeal gland `http://purl.obolibrary.org/obo/UBERON_0003295` +#### Removed +- [pharyngeal gland](http://purl.obolibrary.org/obo/UBERON_0003295) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [chordate pharynx](http://purl.obolibrary.org/obo/UBERON_0001042) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [pharyngeal gland](http://purl.obolibrary.org/obo/UBERON_0003295) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [chordate pharynx](http://purl.obolibrary.org/obo/UBERON_0001042) + + +### pharyngobasilar fascia `http://purl.obolibrary.org/obo/UBERON_0011289` +#### Removed +- [pharyngobasilar fascia](http://purl.obolibrary.org/obo/UBERON_0011289) SubClassOf [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [pharyngobasilar fascia](http://purl.obolibrary.org/obo/UBERON_0011289) SubClassOf [aponeurosis](http://purl.obolibrary.org/obo/UBERON_0006614) + + +### pharyngula stage `http://purl.obolibrary.org/obo/UBERON_0004707` +#### Removed +- [pharyngula stage](http://purl.obolibrary.org/obo/UBERON_0004707) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### pigment epithelium of eye `http://purl.obolibrary.org/obo/UBERON_0007625` +#### Removed +- [pigment epithelium of eye](http://purl.obolibrary.org/obo/UBERON_0007625) EquivalentTo [epithelium](http://purl.obolibrary.org/obo/UBERON_0000483) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [eye](http://purl.obolibrary.org/obo/UBERON_0000970)) + + + +### pleura `http://purl.obolibrary.org/obo/UBERON_0000977` +#### Removed +- [pleura](http://purl.obolibrary.org/obo/UBERON_0000977) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pleural sac](http://purl.obolibrary.org/obo/UBERON_0009778) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "https://github.com/obophenotype/uberon/issues/86" + +#### Added +- [pleura](http://purl.obolibrary.org/obo/UBERON_0000977) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pleural sac](http://purl.obolibrary.org/obo/UBERON_0009778) + + +### pleuroperitoneal canal `http://purl.obolibrary.org/obo/UBERON_0006279` +#### Removed +- [pleuroperitoneal canal](http://purl.obolibrary.org/obo/UBERON_0006279) SubClassOf [epithelial tube](http://purl.obolibrary.org/obo/UBERON_0003914) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "EHDAA2" + +#### Added +- [pleuroperitoneal canal](http://purl.obolibrary.org/obo/UBERON_0006279) SubClassOf [epithelial tube](http://purl.obolibrary.org/obo/UBERON_0003914) + + +### post-embryonic stage `http://purl.obolibrary.org/obo/UBERON_0000092` +#### Removed +- [post-embryonic stage](http://purl.obolibrary.org/obo/UBERON_0000092) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### post-juvenile adult stage `http://purl.obolibrary.org/obo/UBERON_0000113` +#### Removed +- [post-juvenile adult stage](http://purl.obolibrary.org/obo/UBERON_0000113) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### posterior arch of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200172` + +#### Added +- Class: [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) [label](http://www.w3.org/2000/01/rdf-schema#label) "posterior arch of first cervical vertebra" + +- [posterior arch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200172) SubClassOf [arch of atlas](http://purl.obolibrary.org/obo/UBERON_0005814) + + +### posterior clinoid process of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200173` + +#### Added +- Class: [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) [label](http://www.w3.org/2000/01/rdf-schema#label) "posterior clinoid process of sphenoid bone" + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [posterior clinoid process of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200173) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) + + +### posterior communicating artery `http://purl.obolibrary.org/obo/UBERON_0001628` +#### Removed +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) SubClassOf [RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [posterior communicating artery](http://purl.obolibrary.org/obo/UBERON_0001628) SubClassOf [RO_0002252](http://purl.obolibrary.org/obo/RO_0002252) some [internal carotid artery](http://purl.obolibrary.org/obo/UBERON_0001532) + + +### posterior gluteal line of ilium of os coxa `http://purl.obolibrary.org/obo/UBERON_1200174` + +#### Added +- Class: [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) [label](http://www.w3.org/2000/01/rdf-schema#label) "posterior gluteal line of ilium of os coxa" + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [posterior gluteal line of ilium of os coxa](http://purl.obolibrary.org/obo/UBERON_1200174) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### posterior nucleus of thalamus `http://purl.obolibrary.org/obo/UBERON_0003030` +#### Removed +- [posterior nucleus of thalamus](http://purl.obolibrary.org/obo/UBERON_0003030) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [posterior nuclear complex of thalamus](http://purl.obolibrary.org/obo/UBERON_0002709) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + + - [source](http://www.geneontology.org/formats/oboInOwl#source) "NIFSTD" + +#### Added +- [posterior nucleus of thalamus](http://purl.obolibrary.org/obo/UBERON_0003030) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [posterior nuclear complex of thalamus](http://purl.obolibrary.org/obo/UBERON_0002709) + + +### posterior sacral foramina of sacrum `http://purl.obolibrary.org/obo/UBERON_1200175` + +#### Added +- Class: [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) [label](http://www.w3.org/2000/01/rdf-schema#label) "posterior sacral foramina of sacrum" + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [posterior sacral foramina of sacrum](http://purl.obolibrary.org/obo/UBERON_1200175) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### postglenoid tubercle of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200177` + +#### Added +- Class: [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) [label](http://www.w3.org/2000/01/rdf-schema#label) "postglenoid tubercle of squamous part of temporal bone" + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [postglenoid tubercle of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200177) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### presomitic mesoderm `http://purl.obolibrary.org/obo/UBERON_0003059` +#### Removed +- [presomitic mesoderm](http://purl.obolibrary.org/obo/UBERON_0003059) SubClassOf [RO_0002495](http://purl.obolibrary.org/obo/RO_0002495) some [presumptive segmental plate](http://purl.obolibrary.org/obo/UBERON_0007282) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Bgee:AN" + +#### Added +- [presomitic mesoderm](http://purl.obolibrary.org/obo/UBERON_0003059) SubClassOf [RO_0002495](http://purl.obolibrary.org/obo/RO_0002495) some [presumptive segmental plate](http://purl.obolibrary.org/obo/UBERON_0007282) + + +### primary circulatory organ `http://purl.obolibrary.org/obo/UBERON_0007100` +#### Removed +- [primary circulatory organ](http://purl.obolibrary.org/obo/UBERON_0007100) SubClassOf [RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0008015](http://purl.obolibrary.org/obo/GO_0008015) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "GO uses blood circulation generically to include the haemolymphatic fluid of arthropods" + +#### Added +- [primary circulatory organ](http://purl.obolibrary.org/obo/UBERON_0007100) SubClassOf [RO_0002215](http://purl.obolibrary.org/obo/RO_0002215) some [GO_0008015](http://purl.obolibrary.org/obo/GO_0008015) + + +### primary lymphoid nodule of tonsil `http://purl.obolibrary.org/obo/UBERON_0010423` +#### Removed +- [primary lymphoid nodule of tonsil](http://purl.obolibrary.org/obo/UBERON_0010423) SubClassOf [primary nodular lymphoid tissue](http://purl.obolibrary.org/obo/UBERON_0010422) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [primary lymphoid nodule of tonsil](http://purl.obolibrary.org/obo/UBERON_0010423) SubClassOf [primary nodular lymphoid tissue](http://purl.obolibrary.org/obo/UBERON_0010422) + + +### primary vitreous `http://purl.obolibrary.org/obo/UBERON_0005746` +#### Removed +- [primary vitreous](http://purl.obolibrary.org/obo/UBERON_0005746) SubClassOf [ectoderm-derived structure](http://purl.obolibrary.org/obo/UBERON_0004121) + + + +### prime adult stage `http://purl.obolibrary.org/obo/UBERON_0018241` +#### Removed +- [prime adult stage](http://purl.obolibrary.org/obo/UBERON_0018241) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### pronephric nephron tubule `http://purl.obolibrary.org/obo/UBERON_0005310` +#### Removed +- [pronephric nephron tubule](http://purl.obolibrary.org/obo/UBERON_0005310) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pronephric nephron](http://purl.obolibrary.org/obo/UBERON_0005309) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "GO" + +#### Added +- [pronephric nephron tubule](http://purl.obolibrary.org/obo/UBERON_0005310) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pronephric nephron](http://purl.obolibrary.org/obo/UBERON_0005309) + + +### proximal-distal subdivision of colon `http://purl.obolibrary.org/obo/UBERON_0000168` +#### Removed +- [proximal-distal subdivision of colon](http://purl.obolibrary.org/obo/UBERON_0000168) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [colon](http://purl.obolibrary.org/obo/UBERON_0001155) + + + +### pterygoid fossa of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200179` + +#### Added +- Class: [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) [label](http://www.w3.org/2000/01/rdf-schema#label) "pterygoid fossa of sphenoid bone" + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [pterygoid fossa of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200179) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) + + +### pterygoid fovea of mandible `http://purl.obolibrary.org/obo/UBERON_1200180` + +#### Added +- Class: [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) [label](http://www.w3.org/2000/01/rdf-schema#label) "pterygoid fovea of mandible" + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [pterygoid fovea of mandible](http://purl.obolibrary.org/obo/UBERON_1200180) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### pterygoid hamulus of sphenoid bone `http://purl.obolibrary.org/obo/UBERON_1200181` + +#### Added +- Class: [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sphenoid_bone" + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) [label](http://www.w3.org/2000/01/rdf-schema#label) "pterygoid hamulus of sphenoid bone" + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [pterygoid hamulus of sphenoid bone](http://purl.obolibrary.org/obo/UBERON_1200181) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sphenoid bone](http://purl.obolibrary.org/obo/UBERON_0001677) + + +### pubic body of pubis of os coxa `http://purl.obolibrary.org/obo/UBERON_1200182` + +#### Added +- Class: [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) [label](http://www.w3.org/2000/01/rdf-schema#label) "pubic body of pubis of os coxa" + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [pubic body of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200182) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### pubic crest of pubis of os coxa `http://purl.obolibrary.org/obo/UBERON_1200183` + +#### Added +- Class: [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) [label](http://www.w3.org/2000/01/rdf-schema#label) "pubic crest of pubis of os coxa" + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) + +- [pubic crest of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200183) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### pubic tubercle of pubis of os coxa `http://purl.obolibrary.org/obo/UBERON_1200185` + +#### Added +- Class: [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Hip_bone" + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) [label](http://www.w3.org/2000/01/rdf-schema#label) "pubic tubercle of pubis of os coxa" + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [pubic tubercle of pubis of os coxa](http://purl.obolibrary.org/obo/UBERON_1200185) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [innominate bone](http://purl.obolibrary.org/obo/UBERON_0001272) + + +### pupal stage `http://purl.obolibrary.org/obo/UBERON_0000070` +#### Removed +- [pupal stage](http://purl.obolibrary.org/obo/UBERON_0000070) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### radial fossa of humerus `http://purl.obolibrary.org/obo/UBERON_1200186` + +#### Added +- Class: [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Humerus" + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) [label](http://www.w3.org/2000/01/rdf-schema#label) "radial fossa of humerus" + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [radial fossa of humerus](http://purl.obolibrary.org/obo/UBERON_1200186) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) + + +### radial groove of humerus `http://purl.obolibrary.org/obo/UBERON_1200187` + +#### Added +- Class: [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Humerus" + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) [label](http://www.w3.org/2000/01/rdf-schema#label) "radial groove of humerus" + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) SubClassOf [surface groove](http://purl.obolibrary.org/obo/UBERON_0006846) + +- [radial groove of humerus](http://purl.obolibrary.org/obo/UBERON_1200187) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [humerus](http://purl.obolibrary.org/obo/UBERON_0000976) + + +### radial tuberosity of radius `http://purl.obolibrary.org/obo/UBERON_1200188` + +#### Added +- Class: [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Radius_(bone)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) [label](http://www.w3.org/2000/01/rdf-schema#label) "radial tuberosity of radius" + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [radial tuberosity of radius](http://purl.obolibrary.org/obo/UBERON_1200188) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [radius bone](http://purl.obolibrary.org/obo/UBERON_0001423) + + +### rectal venous plexus `http://purl.obolibrary.org/obo/UBERON_0008887` +#### Removed +- [rectal venous plexus](http://purl.obolibrary.org/obo/UBERON_0008887) SubClassOf [venous plexus](http://purl.obolibrary.org/obo/UBERON_0001593) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [rectal venous plexus](http://purl.obolibrary.org/obo/UBERON_0008887) SubClassOf [venous plexus](http://purl.obolibrary.org/obo/UBERON_0001593) + + +### renal cortex interstitium `http://purl.obolibrary.org/obo/UBERON_0005270` +#### Removed +- [renal cortex interstitium](http://purl.obolibrary.org/obo/UBERON_0005270) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [renal cortex interstitium](http://purl.obolibrary.org/obo/UBERON_0005270) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) + + +### renal cortex tubule `http://purl.obolibrary.org/obo/UBERON_0006853` +#### Removed +- [renal cortex tubule](http://purl.obolibrary.org/obo/UBERON_0006853) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [renal cortex tubule](http://purl.obolibrary.org/obo/UBERON_0006853) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [cortex of kidney](http://purl.obolibrary.org/obo/UBERON_0001225) + + +### renal parenchyma `http://purl.obolibrary.org/obo/UBERON_0008987` +#### Removed +- [renal parenchyma](http://purl.obolibrary.org/obo/UBERON_0008987) SubClassOf [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +- [renal parenchyma](http://purl.obolibrary.org/obo/UBERON_0008987) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [renal parenchyma](http://purl.obolibrary.org/obo/UBERON_0008987) SubClassOf [parenchyma](http://purl.obolibrary.org/obo/UBERON_0000353) + +- [renal parenchyma](http://purl.obolibrary.org/obo/UBERON_0008987) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [kidney](http://purl.obolibrary.org/obo/UBERON_0002113) + + +### retinal neural layer `http://purl.obolibrary.org/obo/UBERON_0003902` +#### Removed +- [retinal neural layer](http://purl.obolibrary.org/obo/UBERON_0003902) SubClassOf [RO_0002495](http://purl.obolibrary.org/obo/RO_0002495) some [presumptive neural retina](http://purl.obolibrary.org/obo/UBERON_0005425) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Bgee:AN" + +#### Added +- [retinal neural layer](http://purl.obolibrary.org/obo/UBERON_0003902) SubClassOf [RO_0002495](http://purl.obolibrary.org/obo/RO_0002495) some [presumptive neural retina](http://purl.obolibrary.org/obo/UBERON_0005425) + + +### right clavicle `http://purl.obolibrary.org/obo/UBERON_0008255` +#### Removed +- [right clavicle](http://purl.obolibrary.org/obo/UBERON_0008255) SubClassOf [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [right clavicle](http://purl.obolibrary.org/obo/UBERON_0008255) SubClassOf [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) + + +### right hepatic artery `http://purl.obolibrary.org/obo/UBERON_0015482` +#### Removed +- [right hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015482) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [right hepatic artery](http://purl.obolibrary.org/obo/UBERON_0015482) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [right lobe of liver](http://purl.obolibrary.org/obo/UBERON_0001114) + + +### right ovarian vein `http://purl.obolibrary.org/obo/UBERON_0039856` +#### Removed +- [right ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039856) SubClassOf [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [right ovarian vein](http://purl.obolibrary.org/obo/UBERON_0039856) SubClassOf [ovarian vein](http://purl.obolibrary.org/obo/UBERON_0001145) + + +### risorius muscle `http://purl.obolibrary.org/obo/UBERON_0008598` +#### Removed +- [risorius muscle](http://purl.obolibrary.org/obo/UBERON_0008598) SubClassOf [facial muscle](http://purl.obolibrary.org/obo/UBERON_0001577) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MFMO" + +#### Added +- [risorius muscle](http://purl.obolibrary.org/obo/UBERON_0008598) SubClassOf [facial muscle](http://purl.obolibrary.org/obo/UBERON_0001577) + + +### root of abducens nerve `http://purl.obolibrary.org/obo/UBERON_0002786` +#### Removed +- [root of abducens nerve](http://purl.obolibrary.org/obo/UBERON_0002786) SubClassOf [root of cranial nerve](http://purl.obolibrary.org/obo/UBERON_0006843) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [root of abducens nerve](http://purl.obolibrary.org/obo/UBERON_0002786) SubClassOf [root of cranial nerve](http://purl.obolibrary.org/obo/UBERON_0006843) + + +### sacral apex of sacrum `http://purl.obolibrary.org/obo/UBERON_1200189` + +#### Added +- Class: [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral apex of sacrum" + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sacral apex of sacrum](http://purl.obolibrary.org/obo/UBERON_1200189) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### sacral canal of sacrum `http://purl.obolibrary.org/obo/UBERON_1200190` + +#### Added +- Class: [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral canal of sacrum" + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [sacral canal of sacrum](http://purl.obolibrary.org/obo/UBERON_1200190) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### sacral cornu of sacrum `http://purl.obolibrary.org/obo/UBERON_1200191` + +#### Added +- Class: [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral cornu of sacrum" + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [sacral cornu of sacrum](http://purl.obolibrary.org/obo/UBERON_1200191) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### sacral hiatus of sacrum `http://purl.obolibrary.org/obo/UBERON_1200192` + +#### Added +- Class: [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral hiatus of sacrum" + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [sacral hiatus of sacrum](http://purl.obolibrary.org/obo/UBERON_1200192) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### sacral promontory of sacrum `http://purl.obolibrary.org/obo/UBERON_1200193` + +#### Added +- Class: [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral promontory of sacrum" + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sacral promontory of sacrum](http://purl.obolibrary.org/obo/UBERON_1200193) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### sacral region of vertebral column `http://purl.obolibrary.org/obo/UBERON_0006075` +#### Removed +- [sacral region of vertebral column](http://purl.obolibrary.org/obo/UBERON_0006075) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sacral region](http://purl.obolibrary.org/obo/UBERON_0005473) + + + +### sacral spine of sacrum `http://purl.obolibrary.org/obo/UBERON_1200194` + +#### Added +- Class: [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral spine of sacrum" + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [sacral spine of sacrum](http://purl.obolibrary.org/obo/UBERON_1200194) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### sacral tuberosity of sacrum `http://purl.obolibrary.org/obo/UBERON_1200195` + +#### Added +- Class: [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sacrum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) [label](http://www.w3.org/2000/01/rdf-schema#label) "sacral tuberosity of sacrum" + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [sacral tuberosity of sacrum](http://purl.obolibrary.org/obo/UBERON_1200195) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fused sacrum](http://purl.obolibrary.org/obo/UBERON_0003690) + + +### salivary gland ducto-acinar unit `http://purl.obolibrary.org/obo/UBERON_8000010` + +#### Added +- Class: [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3657"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "salivon" + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "salivary gland ducto-acinar" + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8000010" + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A lobule of a salivary gland consisting of the ducto-acinar unit and the secretory acini together with their contiguous ductal segments, including the intercalated duct and striated duct, together with associated myoepithelial cells, stromal tissue, and vasculature. This structural-functional unit is responsible for the production of primary saliva by the acinar cells and its ionic modification during transit through the ductal segments." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30855909" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:24862590" + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [comment](http://www.w3.org/2000/01/rdf-schema#comment) "Also known as the "salivon" in classical salivary physiology literature. The three major salivary glands (parotid, submandibular, sublingual) contain gland-specific variants of this unit that differ in acinar cell composition (serous vs. mucous vs. mixed)." + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) [label](http://www.w3.org/2000/01/rdf-schema#label) "salivary gland ducto-acinar unit" + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) SubClassOf [organ subunit](http://purl.obolibrary.org/obo/UBERON_0000063) + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [saliva-secreting gland](http://purl.obolibrary.org/obo/UBERON_0001044) + +- [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lobule](http://purl.obolibrary.org/obo/UBERON_0009911) + + +### scalene tubercle of first rib `http://purl.obolibrary.org/obo/UBERON_1200196` + +#### Added +- Class: [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) [label](http://www.w3.org/2000/01/rdf-schema#label) "scalene tubercle of first rib" + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [scalene tubercle of first rib](http://purl.obolibrary.org/obo/UBERON_1200196) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) + + +### scaphoid tubercle of scaphoid `http://purl.obolibrary.org/obo/UBERON_1200197` + +#### Added +- Class: [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) [label](http://www.w3.org/2000/01/rdf-schema#label) "scaphoid tubercle of scaphoid" + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [scaphoid tubercle of scaphoid](http://purl.obolibrary.org/obo/UBERON_1200197) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) + + +### scapular notch of scapula `http://purl.obolibrary.org/obo/UBERON_1200198` + +#### Added +- Class: [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) [label](http://www.w3.org/2000/01/rdf-schema#label) "scapular notch of scapula" + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [scapular notch of scapula](http://purl.obolibrary.org/obo/UBERON_1200198) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) + + +### scapular spine of scapula `http://purl.obolibrary.org/obo/UBERON_1200199` + +#### Added +- Class: [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) [label](http://www.w3.org/2000/01/rdf-schema#label) "scapular spine of scapula" + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [scapular spine of scapula](http://purl.obolibrary.org/obo/UBERON_1200199) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) + + +### secondary dentition `http://purl.obolibrary.org/obo/UBERON_0007774` +#### Removed +- [secondary dentition](http://purl.obolibrary.org/obo/UBERON_0007774) SubClassOf [dentition](http://purl.obolibrary.org/obo/UBERON_0003672) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [secondary dentition](http://purl.obolibrary.org/obo/UBERON_0007774) SubClassOf [dentition](http://purl.obolibrary.org/obo/UBERON_0003672) + + +### secretory circumventricular organ `http://purl.obolibrary.org/obo/UBERON_0010134` +#### Removed +- [secretory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010134) SubClassOf [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [secretory circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0010134) SubClassOf [circumventricular organ](http://purl.obolibrary.org/obo/UBERON_0005408) + + +### sesamoid bone of manus `http://purl.obolibrary.org/obo/UBERON_0007997` +#### Removed +- [sesamoid bone of manus](http://purl.obolibrary.org/obo/UBERON_0007997) SubClassOf [sesamoid bone](http://purl.obolibrary.org/obo/UBERON_0001479) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [sesamoid bone of manus](http://purl.obolibrary.org/obo/UBERON_0007997) SubClassOf [sesamoid bone](http://purl.obolibrary.org/obo/UBERON_0001479) + + +### sesamoid bone of pes `http://purl.obolibrary.org/obo/UBERON_0008000` +#### Removed +- [sesamoid bone of pes](http://purl.obolibrary.org/obo/UBERON_0008000) SubClassOf [sesamoid bone](http://purl.obolibrary.org/obo/UBERON_0001479) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [sesamoid bone of pes](http://purl.obolibrary.org/obo/UBERON_0008000) SubClassOf [sesamoid bone](http://purl.obolibrary.org/obo/UBERON_0001479) + + +### sexually immature stage `http://purl.obolibrary.org/obo/UBERON_0000112` +#### Removed +- [sexually immature stage](http://purl.obolibrary.org/obo/UBERON_0000112) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### shaft of first distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200201` + +#### Added +- Class: [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) [label](http://www.w3.org/2000/01/rdf-schema#label) "shaft of first distal phalanx of hand" + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [shaft of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200201) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 1](http://purl.obolibrary.org/obo/UBERON_0004337) + + +### shaft of first proximal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200202` + +#### Added +- Class: [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) [label](http://www.w3.org/2000/01/rdf-schema#label) "shaft of first proximal phalanx of hand" + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [shaft of first proximal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200202) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [proximal phalanx of manual digit 1](http://purl.obolibrary.org/obo/UBERON_0004338) + + +### shaft of radius of radius `http://purl.obolibrary.org/obo/UBERON_1200203` + +#### Added +- Class: [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Radius_(bone)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) [label](http://www.w3.org/2000/01/rdf-schema#label) "shaft of radius of radius" + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [shaft of radius of radius](http://purl.obolibrary.org/obo/UBERON_1200203) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [radius bone](http://purl.obolibrary.org/obo/UBERON_0001423) + + +### shaft of ulna of ulna `http://purl.obolibrary.org/obo/UBERON_1200204` + +#### Added +- Class: [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ulna" + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) [label](http://www.w3.org/2000/01/rdf-schema#label) "shaft of ulna of ulna" + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [shaft of ulna of ulna](http://purl.obolibrary.org/obo/UBERON_1200204) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ulna](http://purl.obolibrary.org/obo/UBERON_0001424) + + +### skeletal ligament `http://purl.obolibrary.org/obo/UBERON_0008846` +#### Removed +- [skeletal ligament](http://purl.obolibrary.org/obo/UBERON_0008846) SubClassOf [RO_0002176](http://purl.obolibrary.org/obo/RO_0002176) some [skeletal element](http://purl.obolibrary.org/obo/UBERON_0004765) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "bones or cartilage organs" + +#### Added +- [skeletal ligament](http://purl.obolibrary.org/obo/UBERON_0008846) SubClassOf [RO_0002176](http://purl.obolibrary.org/obo/RO_0002176) some [skeletal element](http://purl.obolibrary.org/obo/UBERON_0004765) + + +### skeletal muscle organ, vertebrate `http://purl.obolibrary.org/obo/UBERON_0014892` +#### Removed +- [skeletal muscle organ, vertebrate](http://purl.obolibrary.org/obo/UBERON_0014892) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:dos" + +#### Added +- [skeletal muscle organ, vertebrate](http://purl.obolibrary.org/obo/UBERON_0014892) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### soleal line of tibia `http://purl.obolibrary.org/obo/UBERON_1200205` + +#### Added +- Class: [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) [label](http://www.w3.org/2000/01/rdf-schema#label) "soleal line of tibia" + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [soleal line of tibia](http://purl.obolibrary.org/obo/UBERON_1200205) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) + + +### somatic muscle, invertebrate `http://purl.obolibrary.org/obo/UBERON_0014895` +#### Removed +- [somatic muscle, invertebrate](http://purl.obolibrary.org/obo/UBERON_0014895) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A muscle structure of invertebrates whose origin and insertion sites are in basal side of the epidermis or structures derived from it. The simplest somatic muscles consist of a single cell and associated extracellular structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:DOS" + +#### Added +- [somatic muscle, invertebrate](http://purl.obolibrary.org/obo/UBERON_0014895) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A muscle structure of invertebrates whose origin and insertion sites are in basal side of the epidermis or structures derived from it. The simplest somatic muscles consist of a single cell and associated extracellular structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### spinal cord neural plate `http://purl.obolibrary.org/obo/UBERON_0003854` +#### Removed +- [spinal cord neural plate](http://purl.obolibrary.org/obo/UBERON_0003854) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [future spinal cord](http://purl.obolibrary.org/obo/UBERON_0006241) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "ZFA" + +#### Added +- [spinal cord neural plate](http://purl.obolibrary.org/obo/UBERON_0003854) SubClassOf [RO_0002202](http://purl.obolibrary.org/obo/RO_0002202) some [future spinal cord](http://purl.obolibrary.org/obo/UBERON_0006241) + + +### spinal nerve root `http://purl.obolibrary.org/obo/UBERON_0009623` +#### Removed +- [spinal nerve root](http://purl.obolibrary.org/obo/UBERON_0009623) SubClassOf [nerve root](http://purl.obolibrary.org/obo/UBERON_0002211) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [spinal nerve root](http://purl.obolibrary.org/obo/UBERON_0009623) SubClassOf [nerve root](http://purl.obolibrary.org/obo/UBERON_0002211) + + +### spinous process of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200206` + +#### Added +- Class: [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) [label](http://www.w3.org/2000/01/rdf-schema#label) "spinous process of first cervical vertebra" + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) SubClassOf [neural spine](http://purl.obolibrary.org/obo/UBERON_0001076) + +- [spinous process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200206) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### spinous process of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200207` + +#### Added +- Class: [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) [label](http://www.w3.org/2000/01/rdf-schema#label) "spinous process of second cervical vertebra" + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) SubClassOf [neural spine](http://purl.obolibrary.org/obo/UBERON_0001076) + +- [spinous process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200207) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### staphylon `http://purl.obolibrary.org/obo/UBERON_8500007` + +#### Added +- Class: [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) + +- [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) [contributor](http://purl.org/dc/terms/contributor) "https://orcid.org/0000-0001-8415-4848" + +- [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8500007" + +- [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "Anatomical point of cranium; the most aboral point of the horizontal part of the palate in the median plane." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "isbn:9780873659505" + +- [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) [label](http://www.w3.org/2000/01/rdf-schema#label) "staphylon" + +- [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) SubClassOf [anatomical point](http://purl.obolibrary.org/obo/UBERON_0006983) + +- [staphylon](http://purl.obolibrary.org/obo/UBERON_8500007) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [palate bone](http://purl.obolibrary.org/obo/UBERON_0012071) + + +### sternal angle of sternum `http://purl.obolibrary.org/obo/UBERON_1200208` + +#### Added +- Class: [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sternum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal angle of sternum" + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal angle of sternum](http://purl.obolibrary.org/obo/UBERON_1200208) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) + + +### sternal end of eighth rib `http://purl.obolibrary.org/obo/UBERON_1200209` + +#### Added +- Class: [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of eighth rib" + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of eighth rib](http://purl.obolibrary.org/obo/UBERON_1200209) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 8](http://purl.obolibrary.org/obo/UBERON_0010757) + + +### sternal end of eleventh rib `http://purl.obolibrary.org/obo/UBERON_1200210` + +#### Added +- Class: [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of eleventh rib" + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of eleventh rib](http://purl.obolibrary.org/obo/UBERON_1200210) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 11](http://purl.obolibrary.org/obo/UBERON_0004610) + + +### sternal end of fifth rib `http://purl.obolibrary.org/obo/UBERON_1200211` + +#### Added +- Class: [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of fifth rib" + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of fifth rib](http://purl.obolibrary.org/obo/UBERON_1200211) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 5](http://purl.obolibrary.org/obo/UBERON_0004605) + + +### sternal end of first rib `http://purl.obolibrary.org/obo/UBERON_1200212` + +#### Added +- Class: [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of first rib" + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of first rib](http://purl.obolibrary.org/obo/UBERON_1200212) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 1](http://purl.obolibrary.org/obo/UBERON_0004601) + + +### sternal end of fourth rib `http://purl.obolibrary.org/obo/UBERON_1200213` + +#### Added +- Class: [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of fourth rib" + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of fourth rib](http://purl.obolibrary.org/obo/UBERON_1200213) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 4](http://purl.obolibrary.org/obo/UBERON_0004604) + + +### sternal end of ninth rib `http://purl.obolibrary.org/obo/UBERON_1200214` + +#### Added +- Class: [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of ninth rib" + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of ninth rib](http://purl.obolibrary.org/obo/UBERON_1200214) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 9](http://purl.obolibrary.org/obo/UBERON_0004608) + + +### sternal end of second rib `http://purl.obolibrary.org/obo/UBERON_1200215` + +#### Added +- Class: [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of second rib" + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of second rib](http://purl.obolibrary.org/obo/UBERON_1200215) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 2](http://purl.obolibrary.org/obo/UBERON_0004602) + + +### sternal end of seventh rib `http://purl.obolibrary.org/obo/UBERON_1200216` + +#### Added +- Class: [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of seventh rib" + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of seventh rib](http://purl.obolibrary.org/obo/UBERON_1200216) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 7](http://purl.obolibrary.org/obo/UBERON_0004607) + + +### sternal end of sixth rib `http://purl.obolibrary.org/obo/UBERON_1200217` + +#### Added +- Class: [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of sixth rib" + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of sixth rib](http://purl.obolibrary.org/obo/UBERON_1200217) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 6](http://purl.obolibrary.org/obo/UBERON_0004606) + + +### sternal end of tenth rib `http://purl.obolibrary.org/obo/UBERON_1200218` + +#### Added +- Class: [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of tenth rib" + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of tenth rib](http://purl.obolibrary.org/obo/UBERON_1200218) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 10](http://purl.obolibrary.org/obo/UBERON_0004609) + + +### sternal end of third rib `http://purl.obolibrary.org/obo/UBERON_1200219` + +#### Added +- Class: [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of third rib" + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of third rib](http://purl.obolibrary.org/obo/UBERON_1200219) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 3](http://purl.obolibrary.org/obo/UBERON_0004603) + + +### sternal end of twelfth rib `http://purl.obolibrary.org/obo/UBERON_1200220` + +#### Added +- Class: [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Rib" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal end of twelfth rib" + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal end of twelfth rib](http://purl.obolibrary.org/obo/UBERON_1200220) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [rib 12](http://purl.obolibrary.org/obo/UBERON_0004611) + + +### sternal region bone `http://purl.obolibrary.org/obo/UBERON_1200221` + +#### Added +- Class: [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sternum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) [label](http://www.w3.org/2000/01/rdf-schema#label) "sternal region bone" + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sternal region bone](http://purl.obolibrary.org/obo/UBERON_1200221) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) + + +### sternocephalicus muscle `http://purl.obolibrary.org/obo/UBERON_0011371` +#### Removed +- [sternocephalicus muscle](http://purl.obolibrary.org/obo/UBERON_0011371) SubClassOf [RO_0002373](http://purl.obolibrary.org/obo/RO_0002373) some [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "nuchal crest" + +#### Added +- [sternocephalicus muscle](http://purl.obolibrary.org/obo/UBERON_0011371) SubClassOf [RO_0002373](http://purl.obolibrary.org/obo/RO_0002373) some [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) + + +### sternoclavicular joint `http://purl.obolibrary.org/obo/UBERON_0001469` +#### Removed +- [sternoclavicular joint](http://purl.obolibrary.org/obo/UBERON_0001469) SubClassOf [RO_0002176](http://purl.obolibrary.org/obo/RO_0002176) some [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "clavicular notch of the manubrium sterni" + +- [sternoclavicular joint](http://purl.obolibrary.org/obo/UBERON_0001469) SubClassOf [RO_0002176](http://purl.obolibrary.org/obo/RO_0002176) some [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) + - [notes](http://www.geneontology.org/formats/oboInOwl#notes) "sternal end of the clavicle and first rib" + +#### Added +- [sternoclavicular joint](http://purl.obolibrary.org/obo/UBERON_0001469) SubClassOf [RO_0002176](http://purl.obolibrary.org/obo/RO_0002176) some [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) + +- [sternoclavicular joint](http://purl.obolibrary.org/obo/UBERON_0001469) SubClassOf [RO_0002176](http://purl.obolibrary.org/obo/RO_0002176) some [clavicle bone](http://purl.obolibrary.org/obo/UBERON_0001105) + + +### stratum corneum of esophageal epithelium `http://purl.obolibrary.org/obo/UBERON_8700003` + +#### Added +- Class: [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) [contributor](http://purl.org/dc/terms/contributor) [0009-0005-7919-4905](https://orcid.org/0009-0005-7919-4905) + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) [date](http://purl.org/dc/terms/date) "2024-11-14T15:10:48Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8700003" + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The outermost layer of the stratified squamous epithelium lining the esophagus, composed of several layers of flattened epithelial cells that are partially or non-keratinized. This layer provides a protective barrier against mechanical and chemical insults, contributing to tissue integrity and regulating permeability through its apical cell membranes and intercellular junctional complexes." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1038/gimo15" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://en.wikipedia.org/wiki/Stratified_squamous_epithelium" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:26019440" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:21126700" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "doi:10.1152/ajpgi.00088.2015" + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) [label](http://www.w3.org/2000/01/rdf-schema#label) "stratum corneum of esophageal epithelium" + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) SubClassOf [esophagus squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0006920) + +- [stratum corneum of esophageal epithelium](http://purl.obolibrary.org/obo/UBERON_8700003) SubClassOf [non-keratinized stratified squamous epithelium](http://purl.obolibrary.org/obo/UBERON_0010304) + + +### stylomastoid foramen of petrous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200222` + +#### Added +- Class: [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) [label](http://www.w3.org/2000/01/rdf-schema#label) "stylomastoid foramen of petrous part of temporal bone" + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [stylomastoid foramen of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200222) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### subarachnoid space of brain `http://purl.obolibrary.org/obo/UBERON_0039175` +#### Removed +- [subarachnoid space of brain](http://purl.obolibrary.org/obo/UBERON_0039175) SubClassOf [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [subarachnoid space of brain](http://purl.obolibrary.org/obo/UBERON_0039175) SubClassOf [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) + + +### subarachnoid space of spinal cord `http://purl.obolibrary.org/obo/UBERON_0039176` +#### Removed +- [subarachnoid space of spinal cord](http://purl.obolibrary.org/obo/UBERON_0039176) SubClassOf [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [subarachnoid space of spinal cord](http://purl.obolibrary.org/obo/UBERON_0039176) SubClassOf [subarachnoid space](http://purl.obolibrary.org/obo/UBERON_0000315) + + +### subdivision of `http://purl.obolibrary.org/obo/uberon/core#subdivision_of` + +#### Added +- [subdivision of](http://purl.obolibrary.org/obo/uberon/core#subdivision_of) SubPropertyOf: [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) + + +### subdivision of conjunctiva `http://purl.obolibrary.org/obo/UBERON_0010305` +#### Removed +- [subdivision of conjunctiva](http://purl.obolibrary.org/obo/UBERON_0010305) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [conjunctiva](http://purl.obolibrary.org/obo/UBERON_0001811) + + + +### subdivision of digestive tract `http://purl.obolibrary.org/obo/UBERON_0004921` +#### Removed +- [subdivision of digestive tract](http://purl.obolibrary.org/obo/UBERON_0004921) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [digestive tract](http://purl.obolibrary.org/obo/UBERON_0001555) + + + +### subdivision of oviduct `http://purl.obolibrary.org/obo/UBERON_0013515` +#### Removed +- [subdivision of oviduct](http://purl.obolibrary.org/obo/UBERON_0013515) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [oviduct](http://purl.obolibrary.org/obo/UBERON_0000993) + + + +### subdivision of spinal cord central canal `http://purl.obolibrary.org/obo/UBERON_0014538` +#### Removed +- [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002291) + + + +### subdivision of tube `http://purl.obolibrary.org/obo/UBERON_0013522` +#### Removed +- [subdivision of tube](http://purl.obolibrary.org/obo/UBERON_0013522) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tube](http://purl.obolibrary.org/obo/UBERON_0000025) + + + +### subdivision of vertebral column `http://purl.obolibrary.org/obo/UBERON_0006077` +#### Removed +- [subdivision of vertebral column](http://purl.obolibrary.org/obo/UBERON_0006077) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral column](http://purl.obolibrary.org/obo/UBERON_0001130) + + + +### sublingual fossa of mandible `http://purl.obolibrary.org/obo/UBERON_1200223` + +#### Added +- Class: [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) [label](http://www.w3.org/2000/01/rdf-schema#label) "sublingual fossa of mandible" + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [sublingual fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200223) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### sublingual gland ducto-acinar unit `http://purl.obolibrary.org/obo/UBERON_8000012` + +#### Added +- Class: [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3657"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "sublingual gland ducto-acinar" + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8000012" + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A salivary gland ducto-acinar unit that is part of the sublingual gland, consisting of predominantly mucous acini (with minor serous demilunes) together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a viscous, mucin-rich saliva." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30855909" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:24862590" + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) [label](http://www.w3.org/2000/01/rdf-schema#label) "sublingual gland ducto-acinar unit" + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) SubClassOf [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) + +- [sublingual gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000012) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sublingual gland](http://purl.obolibrary.org/obo/UBERON_0001832) + + +### submandibular fossa of mandible `http://purl.obolibrary.org/obo/UBERON_1200224` + +#### Added +- Class: [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) [label](http://www.w3.org/2000/01/rdf-schema#label) "submandibular fossa of mandible" + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [submandibular fossa of mandible](http://purl.obolibrary.org/obo/UBERON_1200224) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### submandibular gland ducto-acinar unit `http://purl.obolibrary.org/obo/UBERON_8000013` + +#### Added +- Class: [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3657"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) [hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym) "submandibular gland ducto-acinar" + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:8000013" + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A salivary gland ducto-acinar unit that is part of the submandibular gland, consisting of a mixture of predominantly serous acini with a minority of mucous acini, together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a mixed serous-mucous saliva." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:30855909" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:24862590" + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) [label](http://www.w3.org/2000/01/rdf-schema#label) "submandibular gland ducto-acinar unit" + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) SubClassOf [salivary gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000010) + +- [submandibular gland ducto-acinar unit](http://purl.obolibrary.org/obo/UBERON_8000013) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [submandibular gland](http://purl.obolibrary.org/obo/UBERON_0001736) + + +### supercilary arch of frontal bone `http://purl.obolibrary.org/obo/UBERON_1200225` + +#### Added +- Class: [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Frontal_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) [label](http://www.w3.org/2000/01/rdf-schema#label) "supercilary arch of frontal bone" + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [supercilary arch of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200225) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) + + +### superior articular facet of eighth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200226` + +#### Added +- Class: [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of eighth thoracic vertebra" + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200226) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 8](http://purl.obolibrary.org/obo/UBERON_0011050) + + +### superior articular facet of eleventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200227` + +#### Added +- Class: [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of eleventh thoracic vertebra" + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200227) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 11](http://purl.obolibrary.org/obo/UBERON_0004635) + + +### superior articular facet of fifth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200228` + +#### Added +- Class: [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of fifth cervical vertebra" + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200228) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004614) + + +### superior articular facet of fifth lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200229` + +#### Added +- Class: [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of fifth lumbar vertebra" + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200229) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004621) + + +### superior articular facet of fifth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200230` + +#### Added +- Class: [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of fifth thoracic vertebra" + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200230) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004630) + + +### superior articular facet of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200231` + +#### Added +- Class: [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of first cervical vertebra" + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200231) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### superior articular facet of first lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200232` + +#### Added +- Class: [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of first lumbar vertebra" + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200232) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004617) + + +### superior articular facet of first thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200233` + +#### Added +- Class: [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of first thoracic vertebra" + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200233) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004626) + + +### superior articular facet of fourth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200234` + +#### Added +- Class: [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of fourth cervical vertebra" + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200234) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004613) + + +### superior articular facet of fourth lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200235` + +#### Added +- Class: [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of fourth lumbar vertebra" + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200235) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004620) + + +### superior articular facet of fourth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200236` + +#### Added +- Class: [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of fourth thoracic vertebra" + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200236) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004629) + + +### superior articular facet of ninth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200237` + +#### Added +- Class: [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of ninth thoracic vertebra" + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200237) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 9](http://purl.obolibrary.org/obo/UBERON_0004633) + + +### superior articular facet of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200238` + +#### Added +- Class: [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of second cervical vertebra" + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200238) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### superior articular facet of second lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200239` + +#### Added +- Class: [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of second lumbar vertebra" + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200239) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004618) + + +### superior articular facet of second thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200240` + +#### Added +- Class: [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of second thoracic vertebra" + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200240) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004627) + + +### superior articular facet of seventh cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200241` + +#### Added +- Class: [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of seventh cervical vertebra" + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200241) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004616) + + +### superior articular facet of seventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200242` + +#### Added +- Class: [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of seventh thoracic vertebra" + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200242) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004632) + + +### superior articular facet of sixth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200243` + +#### Added +- Class: [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of sixth cervical vertebra" + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200243) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004615) + + +### superior articular facet of sixth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200244` + +#### Added +- Class: [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of sixth thoracic vertebra" + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200244) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004631) + + +### superior articular facet of tenth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200245` + +#### Added +- Class: [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of tenth thoracic vertebra" + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200245) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 10](http://purl.obolibrary.org/obo/UBERON_0004634) + + +### superior articular facet of third cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200246` + +#### Added +- Class: [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of third cervical vertebra" + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200246) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004612) + + +### superior articular facet of third lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200247` + +#### Added +- Class: [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of third lumbar vertebra" + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200247) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004619) + + +### superior articular facet of third thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200248` + +#### Added +- Class: [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of third thoracic vertebra" + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200248) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004628) + + +### superior articular facet of twelfth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200249` + +#### Added +- Class: [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular facet of twelfth thoracic vertebra" + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior articular facet of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200249) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 12](http://purl.obolibrary.org/obo/UBERON_0004636) + + +### superior articular process of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200250` + +#### Added +- Class: [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular process of first cervical vertebra" + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [superior articular process of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200250) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### superior articular process of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200251` + +#### Added +- Class: [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior articular process of second cervical vertebra" + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) SubClassOf [process of vertebra](http://purl.obolibrary.org/obo/UBERON_0006061) + +- [superior articular process of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200251) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### superior costal facet of eleventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200252` + +#### Added +- Class: [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior costal facet of eleventh thoracic vertebra" + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200252) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 11](http://purl.obolibrary.org/obo/UBERON_0004635) + + +### superior mental spine of mandible `http://purl.obolibrary.org/obo/UBERON_1200253` + +#### Added +- Class: [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Mandible" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior mental spine of mandible" + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [superior mental spine of mandible](http://purl.obolibrary.org/obo/UBERON_1200253) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mandible](http://purl.obolibrary.org/obo/UBERON_0001684) + + +### superior nuchal line of squamous part of occipital bone `http://purl.obolibrary.org/obo/UBERON_1200254` + +#### Added +- Class: [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Occipital_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior nuchal line of squamous part of occipital bone" + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [superior nuchal line of squamous part of occipital bone](http://purl.obolibrary.org/obo/UBERON_1200254) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [occipital bone](http://purl.obolibrary.org/obo/UBERON_0001676) + + +### superior vertebral notch of first cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200255` + +#### Added +- Class: [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Atlas_(anatomy)" + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior vertebral notch of first cervical vertebra" + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [superior vertebral notch of first cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200255) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 1](http://purl.obolibrary.org/obo/UBERON_0001092) + + +### superior vertebral notch of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200256` + +#### Added +- Class: [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) [label](http://www.w3.org/2000/01/rdf-schema#label) "superior vertebral notch of second cervical vertebra" + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) SubClassOf [bone foramen](http://purl.obolibrary.org/obo/UBERON_0005744) + +- [superior vertebral notch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200256) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vertebral bone 2](http://purl.obolibrary.org/obo/UBERON_0001093) + + +### supinator fossa of ulna `http://purl.obolibrary.org/obo/UBERON_1200257` + +#### Added +- Class: [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Ulna" + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) [label](http://www.w3.org/2000/01/rdf-schema#label) "supinator fossa of ulna" + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [supinator fossa of ulna](http://purl.obolibrary.org/obo/UBERON_1200257) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ulna](http://purl.obolibrary.org/obo/UBERON_0001424) + + +### supramastoid crest of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200259` + +#### Added +- Class: [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) [label](http://www.w3.org/2000/01/rdf-schema#label) "supramastoid crest of squamous part of temporal bone" + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) SubClassOf [crest](http://purl.obolibrary.org/obo/UBERON_4200133) + +- [supramastoid crest of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200259) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### supraorbital notch or foramen of frontal bone `http://purl.obolibrary.org/obo/UBERON_1200260` + +#### Added +- Class: [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Frontal_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) [label](http://www.w3.org/2000/01/rdf-schema#label) "supraorbital notch or foramen of frontal bone" + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) SubClassOf [foramen of skull](http://purl.obolibrary.org/obo/UBERON_0013685) + +- [supraorbital notch or foramen of frontal bone](http://purl.obolibrary.org/obo/UBERON_1200260) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tetrapod frontal bone](http://purl.obolibrary.org/obo/UBERON_0000209) + + +### suprasellar region `http://purl.obolibrary.org/obo/UBERON_7770000` + +#### Added +- Class: [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-0819-0473](https://orcid.org/0000-0002-0819-0473) + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "0000-0002-0819-0473" + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:7770000" + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "suprasellar part of cranial cavity" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "FMA:322222" + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The region of the cranial cavity above the sella turcica." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "NCIT:C42602" + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "entire suprasellar region" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "SNOMEDCT:368554001" + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) [label](http://www.w3.org/2000/01/rdf-schema#label) "suprasellar region" + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) SubClassOf [zone of organ](http://purl.obolibrary.org/obo/UBERON_0034944) + +- [suprasellar region](http://purl.obolibrary.org/obo/UBERON_7770000) SubClassOf [RO_0001025](http://purl.obolibrary.org/obo/RO_0001025) some [cranial cavity](http://purl.obolibrary.org/obo/UBERON_0013411) + + +### supraspinous fossa of scapula `http://purl.obolibrary.org/obo/UBERON_1200261` + +#### Added +- Class: [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Scapula" + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) [label](http://www.w3.org/2000/01/rdf-schema#label) "supraspinous fossa of scapula" + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) SubClassOf [bone fossa](http://purl.obolibrary.org/obo/UBERON_0004704) + +- [supraspinous fossa of scapula](http://purl.obolibrary.org/obo/UBERON_1200261) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [scapula](http://purl.obolibrary.org/obo/UBERON_0006849) + + +### suspensory ligament of duodenum `http://purl.obolibrary.org/obo/UBERON_0000642` +#### Removed +- [suspensory ligament of duodenum](http://purl.obolibrary.org/obo/UBERON_0000642) SubClassOf [suspensory ligament](http://purl.obolibrary.org/obo/UBERON_0008841) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Obol" + +- [suspensory ligament of duodenum](http://purl.obolibrary.org/obo/UBERON_0000642) SubClassOf [RO_0002371](http://purl.obolibrary.org/obo/RO_0002371) some [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Obol" + +#### Added +- [suspensory ligament of duodenum](http://purl.obolibrary.org/obo/UBERON_0000642) SubClassOf [suspensory ligament](http://purl.obolibrary.org/obo/UBERON_0008841) + +- [suspensory ligament of duodenum](http://purl.obolibrary.org/obo/UBERON_0000642) SubClassOf [RO_0002371](http://purl.obolibrary.org/obo/RO_0002371) some [duodenum](http://purl.obolibrary.org/obo/UBERON_0002114) + + +### suspensory ligament of testis `http://purl.obolibrary.org/obo/UBERON_0008842` +#### Removed +- [suspensory ligament of testis](http://purl.obolibrary.org/obo/UBERON_0008842) SubClassOf [suspensory ligament](http://purl.obolibrary.org/obo/UBERON_0008841) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "Obol" + +#### Added +- [suspensory ligament of testis](http://purl.obolibrary.org/obo/UBERON_0008842) SubClassOf [suspensory ligament](http://purl.obolibrary.org/obo/UBERON_0008841) + + +### sustentaculum tali of calcaneus `http://purl.obolibrary.org/obo/UBERON_1200262` + +#### Added +- Class: [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Calcaneus" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) [label](http://www.w3.org/2000/01/rdf-schema#label) "sustentaculum tali of calcaneus" + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [sustentaculum tali of calcaneus](http://purl.obolibrary.org/obo/UBERON_1200262) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [calcaneus](http://purl.obolibrary.org/obo/UBERON_0001450) + + +### synarcual region of vertebral column `http://purl.obolibrary.org/obo/UBERON_4200128` +#### Removed +- [synarcual region of vertebral column](http://purl.obolibrary.org/obo/UBERON_4200128) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [synarcual region](http://purl.obolibrary.org/obo/UBERON_4200129) + + + +### synovial cavity of hip joint `http://purl.obolibrary.org/obo/UBERON_0007618` +#### Removed +- [synovial cavity of hip joint](http://purl.obolibrary.org/obo/UBERON_0007618) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [hip joint](http://purl.obolibrary.org/obo/UBERON_0001486) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [synovial cavity of hip joint](http://purl.obolibrary.org/obo/UBERON_0007618) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [hip joint](http://purl.obolibrary.org/obo/UBERON_0001486) + + +### tail electric organ `http://purl.obolibrary.org/obo/UBERON_0010519` +#### Removed +- [tail electric organ](http://purl.obolibrary.org/obo/UBERON_0010519) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tail](http://purl.obolibrary.org/obo/UBERON_0002415) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [tail electric organ](http://purl.obolibrary.org/obo/UBERON_0010519) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tail](http://purl.obolibrary.org/obo/UBERON_0002415) + + +### tectorial membrane of cochlea `http://purl.obolibrary.org/obo/UBERON_0002233` + +#### Added +- [tectorial membrane of cochlea](http://purl.obolibrary.org/obo/UBERON_0002233) SubClassOf [anatomical structure](http://purl.obolibrary.org/obo/UBERON_0000061) + + +### tendon of biceps brachii `http://purl.obolibrary.org/obo/UBERON_0008188` +#### Removed +- [tendon of biceps brachii](http://purl.obolibrary.org/obo/UBERON_0008188) SubClassOf [tendon](http://purl.obolibrary.org/obo/UBERON_0000043) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [tendon of biceps brachii](http://purl.obolibrary.org/obo/UBERON_0008188) SubClassOf [tendon](http://purl.obolibrary.org/obo/UBERON_0000043) + + +### tendon of triceps brachii `http://purl.obolibrary.org/obo/UBERON_0008192` +#### Removed +- [tendon of triceps brachii](http://purl.obolibrary.org/obo/UBERON_0008192) SubClassOf [tendon](http://purl.obolibrary.org/obo/UBERON_0000043) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [tendon of triceps brachii](http://purl.obolibrary.org/obo/UBERON_0008192) SubClassOf [tendon](http://purl.obolibrary.org/obo/UBERON_0000043) + + +### thoracic aorta `http://purl.obolibrary.org/obo/UBERON_0001515` +#### Removed +- [thoracic aorta](http://purl.obolibrary.org/obo/UBERON_0001515) SubClassOf [section of aorta](http://purl.obolibrary.org/obo/UBERON_0005800) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [thoracic aorta](http://purl.obolibrary.org/obo/UBERON_0001515) SubClassOf [section of aorta](http://purl.obolibrary.org/obo/UBERON_0005800) + + +### thoracic division of spinal cord central canal `http://purl.obolibrary.org/obo/UBERON_0014541` +#### Removed +- [thoracic division of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014541) SubClassOf [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "NIFSTD" + +#### Added +- [thoracic division of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014541) SubClassOf [subdivision of spinal cord central canal](http://purl.obolibrary.org/obo/UBERON_0014538) + + +### thymus trabecula `http://purl.obolibrary.org/obo/UBERON_0004791` +#### Removed +- [thymus trabecula](http://purl.obolibrary.org/obo/UBERON_0004791) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [thymus trabecula](http://purl.obolibrary.org/obo/UBERON_0004791) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thymus](http://purl.obolibrary.org/obo/UBERON_0002370) + + +### tibial plateau of tibia `http://purl.obolibrary.org/obo/UBERON_1200264` + +#### Added +- Class: [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Tibia" + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) [label](http://www.w3.org/2000/01/rdf-schema#label) "tibial plateau of tibia" + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) SubClassOf [zone of long bone](http://purl.obolibrary.org/obo/UBERON_0005055) + +- [tibial plateau of tibia](http://purl.obolibrary.org/obo/UBERON_1200264) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tibia](http://purl.obolibrary.org/obo/UBERON_0000979) + + +### tongue muscle `http://purl.obolibrary.org/obo/UBERON_0000378` +#### Removed +- [tongue muscle](http://purl.obolibrary.org/obo/UBERON_0000378) SubClassOf [skeletal muscle organ, vertebrate](http://purl.obolibrary.org/obo/UBERON_0014892) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FEED:rd" + +#### Added +- [tongue muscle](http://purl.obolibrary.org/obo/UBERON_0000378) SubClassOf [skeletal muscle organ, vertebrate](http://purl.obolibrary.org/obo/UBERON_0014892) + + +### transverse costal facet of eighth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200265` + +#### Added +- Class: [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of eighth thoracic vertebra" + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200265) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 8](http://purl.obolibrary.org/obo/UBERON_0011050) + + +### transverse costal facet of eleventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200266` + +#### Added +- Class: [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of eleventh thoracic vertebra" + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200266) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 11](http://purl.obolibrary.org/obo/UBERON_0004635) + + +### transverse costal facet of fifth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200267` + +#### Added +- Class: [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of fifth thoracic vertebra" + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200267) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004630) + + +### transverse costal facet of first thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200268` + +#### Added +- Class: [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of first thoracic vertebra" + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200268) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004626) + + +### transverse costal facet of fourth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200269` + +#### Added +- Class: [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of fourth thoracic vertebra" + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200269) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004629) + + +### transverse costal facet of ninth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200270` + +#### Added +- Class: [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of ninth thoracic vertebra" + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200270) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 9](http://purl.obolibrary.org/obo/UBERON_0004633) + + +### transverse costal facet of second thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200271` + +#### Added +- Class: [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of second thoracic vertebra" + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200271) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004627) + + +### transverse costal facet of seventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200272` + +#### Added +- Class: [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of seventh thoracic vertebra" + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200272) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004632) + + +### transverse costal facet of sixth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200273` + +#### Added +- Class: [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of sixth thoracic vertebra" + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200273) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004631) + + +### transverse costal facet of tenth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200274` + +#### Added +- Class: [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of tenth thoracic vertebra" + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200274) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 10](http://purl.obolibrary.org/obo/UBERON_0004634) + + +### transverse costal facet of third thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200275` + +#### Added +- Class: [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse costal facet of third thoracic vertebra" + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse costal facet of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200275) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004628) + + +### transverse ridges of sternum `http://purl.obolibrary.org/obo/UBERON_1200278` + +#### Added +- Class: [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Sternum" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) [label](http://www.w3.org/2000/01/rdf-schema#label) "transverse ridges of sternum" + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [transverse ridges of sternum](http://purl.obolibrary.org/obo/UBERON_1200278) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [sternum](http://purl.obolibrary.org/obo/UBERON_0000975) + + +### transversely striated somatic muscle `http://purl.obolibrary.org/obo/UBERON_0014896` +#### Removed +- [transversely striated somatic muscle](http://purl.obolibrary.org/obo/UBERON_0014896) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A somatic muscle that consists of one or more somatic muscle myotubes and any associated extracellular structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "GOC:DOS" + +#### Added +- [transversely striated somatic muscle](http://purl.obolibrary.org/obo/UBERON_0014896) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A somatic muscle that consists of one or more somatic muscle myotubes and any associated extracellular structures." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://orcid.org/0000-0002-7073-9172" + + +### trigeminal impression of petrous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200279` + +#### Added +- Class: [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) [label](http://www.w3.org/2000/01/rdf-schema#label) "trigeminal impression of petrous part of temporal bone" + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [trigeminal impression of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200279) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### trochophore stage `http://purl.obolibrary.org/obo/UBERON_0014862` +#### Removed +- [trochophore stage](http://purl.obolibrary.org/obo/UBERON_0014862) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### trunk region of vertebral column `http://purl.obolibrary.org/obo/UBERON_0009568` +#### Removed +- [trunk region of vertebral column](http://purl.obolibrary.org/obo/UBERON_0009568) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [trunk](http://purl.obolibrary.org/obo/UBERON_0002100) + + + +### tubercle of rib `http://purl.obolibrary.org/obo/UBERON_0002235` +#### Removed +- [tubercle of rib](http://purl.obolibrary.org/obo/UBERON_0002235) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [body of rib](http://purl.obolibrary.org/obo/UBERON_0002231) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [tubercle of rib](http://purl.obolibrary.org/obo/UBERON_0002235) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [body of rib](http://purl.obolibrary.org/obo/UBERON_0002231) + + +### tuberosity of fifth distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200281` + +#### Added +- Class: [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) [label](http://www.w3.org/2000/01/rdf-schema#label) "tuberosity of fifth distal phalanx of hand" + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [tuberosity of fifth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200281) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 5](http://purl.obolibrary.org/obo/UBERON_0004314) + + +### tuberosity of first distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200282` + +#### Added +- Class: [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) [label](http://www.w3.org/2000/01/rdf-schema#label) "tuberosity of first distal phalanx of hand" + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [tuberosity of first distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200282) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 1](http://purl.obolibrary.org/obo/UBERON_0004337) + + +### tuberosity of fourth distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200283` + +#### Added +- Class: [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) [label](http://www.w3.org/2000/01/rdf-schema#label) "tuberosity of fourth distal phalanx of hand" + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [tuberosity of fourth distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200283) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 4](http://purl.obolibrary.org/obo/UBERON_0004313) + + +### tuberosity of second distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200284` + +#### Added +- Class: [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) [label](http://www.w3.org/2000/01/rdf-schema#label) "tuberosity of second distal phalanx of hand" + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [tuberosity of second distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200284) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 2](http://purl.obolibrary.org/obo/UBERON_0004311) + + +### tuberosity of third distal phalanx of hand `http://purl.obolibrary.org/obo/UBERON_1200285` + +#### Added +- Class: [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Phalanx_bone" + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) [label](http://www.w3.org/2000/01/rdf-schema#label) "tuberosity of third distal phalanx of hand" + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) + +- [tuberosity of third distal phalanx of hand](http://purl.obolibrary.org/obo/UBERON_1200285) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [distal phalanx of manual digit 3](http://purl.obolibrary.org/obo/UBERON_0004312) + + +### tympanic caniliculus of petrous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200286` + +#### Added +- Class: [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) [label](http://www.w3.org/2000/01/rdf-schema#label) "tympanic caniliculus of petrous part of temporal bone" + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [tympanic caniliculus of petrous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200286) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### umbilical artery endothelium `http://purl.obolibrary.org/obo/UBERON_0007778` +#### Removed +- [umbilical artery endothelium](http://purl.obolibrary.org/obo/UBERON_0007778) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [umbilical artery endothelium](http://purl.obolibrary.org/obo/UBERON_0007778) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [umbilical artery](http://purl.obolibrary.org/obo/UBERON_0001310) + + +### umbilical vein endothelium `http://purl.obolibrary.org/obo/UBERON_0007777` +#### Removed +- [umbilical vein endothelium](http://purl.obolibrary.org/obo/UBERON_0007777) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [umbilical vein](http://purl.obolibrary.org/obo/UBERON_0002066) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [umbilical vein endothelium](http://purl.obolibrary.org/obo/UBERON_0007777) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [umbilical vein](http://purl.obolibrary.org/obo/UBERON_0002066) + + +### upper back muscle `http://purl.obolibrary.org/obo/UBERON_0008243` +#### Removed +- [upper back muscle](http://purl.obolibrary.org/obo/UBERON_0008243) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [dorsal thoracic segment of trunk](http://purl.obolibrary.org/obo/UBERON_0008231) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "MA" + +#### Added +- [upper back muscle](http://purl.obolibrary.org/obo/UBERON_0008243) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [dorsal thoracic segment of trunk](http://purl.obolibrary.org/obo/UBERON_0008231) + + +### upper lobe of left lung `http://purl.obolibrary.org/obo/UBERON_0008952` +#### Removed +- [upper lobe of left lung](http://purl.obolibrary.org/obo/UBERON_0008952) SubClassOf [upper lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008948) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [upper lobe of left lung](http://purl.obolibrary.org/obo/UBERON_0008952) SubClassOf [upper lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008948) + + +### upper lobe of right lung `http://purl.obolibrary.org/obo/UBERON_0002170` +#### Removed +- [upper lobe of right lung](http://purl.obolibrary.org/obo/UBERON_0002170) SubClassOf [upper lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008948) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [upper lobe of right lung](http://purl.obolibrary.org/obo/UBERON_0002170) SubClassOf [upper lobe of lung](http://purl.obolibrary.org/obo/UBERON_0008948) + + +### uropygial gland `http://purl.obolibrary.org/obo/UBERON_0007802` +#### Removed +- [uropygial gland](http://purl.obolibrary.org/obo/UBERON_0007802) SubClassOf [exocrine gland](http://purl.obolibrary.org/obo/UBERON_0002365) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "BTO" + +#### Added +- [uropygial gland](http://purl.obolibrary.org/obo/UBERON_0007802) SubClassOf [exocrine gland](http://purl.obolibrary.org/obo/UBERON_0002365) + + +### veliger stage `http://purl.obolibrary.org/obo/UBERON_0014863` +#### Removed +- [veliger stage](http://purl.obolibrary.org/obo/UBERON_0014863) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### vertebra prominens of seventh cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200287` + +#### Added +- Class: [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebra prominens of seventh cervical vertebra" + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) SubClassOf [zone of bone organ](http://purl.obolibrary.org/obo/UBERON_0005913) + +- [vertebra prominens of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200287) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004616) + + +### vertebral arch of eighth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200288` + +#### Added +- Class: [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of eighth thoracic vertebra" + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of eighth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200288) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 8](http://purl.obolibrary.org/obo/UBERON_0011050) + + +### vertebral arch of eleventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200289` + +#### Added +- Class: [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of eleventh thoracic vertebra" + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of eleventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200289) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 11](http://purl.obolibrary.org/obo/UBERON_0004635) + + +### vertebral arch of fifth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200290` #### Added -- [superior sagittal sinus](http://purl.obolibrary.org/obo/UBERON_0001642) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D054063" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### superior temporal gyrus `http://purl.obolibrary.org/obo/UBERON_0002769` -#### Removed -- [superior temporal gyrus](http://purl.obolibrary.org/obo/UBERON_0002769) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006177" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -#### Added -- [superior temporal gyrus](http://purl.obolibrary.org/obo/UBERON_0002769) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006177" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of fifth cervical vertebra" -### superior tibiofibular joint `http://purl.obolibrary.org/obo/UBERON_0011117` -#### Removed -- [superior tibiofibular joint](http://purl.obolibrary.org/obo/UBERON_0011117) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007719" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) SubClassOf [cervical vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008434) + +- [vertebral arch of fifth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200290) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004614) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) + +### vertebral arch of fifth lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200291` #### Added -- [superior tibiofibular joint](http://purl.obolibrary.org/obo/UBERON_0011117) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D007719" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### supraoptic crest `http://purl.obolibrary.org/obo/UBERON_0002689` -#### Removed -- [supraoptic crest](http://purl.obolibrary.org/obo/UBERON_0002689) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006268" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of fifth lumbar vertebra" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) SubClassOf [lumbar vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008433) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of fifth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200291) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004621) -- [supraoptic crest](http://purl.obolibrary.org/obo/UBERON_0002689) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066278" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### vertebral arch of fifth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200292` #### Added -- [supraoptic crest](http://purl.obolibrary.org/obo/UBERON_0002689) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006268" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [supraoptic crest](http://purl.obolibrary.org/obo/UBERON_0002689) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066278" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### sural nerve `http://purl.obolibrary.org/obo/UBERON_0015488` -#### Removed -- [sural nerve](http://purl.obolibrary.org/obo/UBERON_0015488) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013497" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -#### Added -- [sural nerve](http://purl.obolibrary.org/obo/UBERON_0015488) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013497" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of fifth thoracic vertebra" +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) -### suture `http://purl.obolibrary.org/obo/UBERON_4200215` -#### Removed -- [suture](http://purl.obolibrary.org/obo/UBERON_4200215) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013537" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of fifth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200292) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 5](http://purl.obolibrary.org/obo/UBERON_0004630) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### vertebral arch of first lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200293` #### Added -- [suture](http://purl.obolibrary.org/obo/UBERON_4200215) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013537" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### sympathetic ganglion `http://purl.obolibrary.org/obo/UBERON_0001806` -#### Removed -- [sympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001806) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005728" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of first lumbar vertebra" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) SubClassOf [lumbar vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008433) + +- [vertebral arch of first lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200293) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004617) + + +### vertebral arch of first thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200294` #### Added -- [sympathetic ganglion](http://purl.obolibrary.org/obo/UBERON_0001806) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D005728" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### synencephalon `http://purl.obolibrary.org/obo/UBERON_2000293` -#### Removed -- [synencephalon](http://purl.obolibrary.org/obo/UBERON_2000293) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006476" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of first thoracic vertebra" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of first thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200294) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 1](http://purl.obolibrary.org/obo/UBERON_0004626) + + +### vertebral arch of fourth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200295` #### Added -- [synencephalon](http://purl.obolibrary.org/obo/UBERON_2000293) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006476" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### synostosis `http://purl.obolibrary.org/obo/UBERON_0010361` -#### Removed -- [synostosis](http://purl.obolibrary.org/obo/UBERON_0010361) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013580" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of fourth cervical vertebra" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) SubClassOf [cervical vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008434) + +- [vertebral arch of fourth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200295) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004613) + + +### vertebral arch of fourth lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200296` #### Added -- [synostosis](http://purl.obolibrary.org/obo/UBERON_0010361) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013580" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### tapetum `http://purl.obolibrary.org/obo/UBERON_0015169` -#### Removed -- [tapetum](http://purl.obolibrary.org/obo/UBERON_0015169) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001350" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of fourth lumbar vertebra" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) SubClassOf [lumbar vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008433) + +- [vertebral arch of fourth lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200296) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004620) + + +### vertebral arch of fourth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200297` #### Added -- [tapetum](http://purl.obolibrary.org/obo/UBERON_0015169) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0001350" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### temporal cortex `http://purl.obolibrary.org/obo/UBERON_0016538` -#### Removed -- [temporal cortex](http://purl.obolibrary.org/obo/UBERON_0016538) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013702" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of fourth thoracic vertebra" + +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of fourth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200297) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 4](http://purl.obolibrary.org/obo/UBERON_0004629) + + +### vertebral arch of ninth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200298` #### Added -- [temporal cortex](http://purl.obolibrary.org/obo/UBERON_0016538) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013702" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### tracheal mucosa `http://purl.obolibrary.org/obo/UBERON_0000379` -#### Removed -- [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A mucosa that is part of a respiratory airway." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) EquivalentTo [mucosa](http://purl.obolibrary.org/obo/UBERON_0000344) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [respiratory airway](http://purl.obolibrary.org/obo/UBERON_0001005)) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [respiratory airway](http://purl.obolibrary.org/obo/UBERON_0001005) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of ninth thoracic vertebra" + +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of ninth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200298) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 9](http://purl.obolibrary.org/obo/UBERON_0004633) + + +### vertebral arch of second cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200299` #### Added -- [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A mucosa that is part of a trachea." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "OBOL:automatic" +- Class: [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) -- [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) EquivalentTo [mucosa](http://purl.obolibrary.org/obo/UBERON_0000344) and ([BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [trachea](http://purl.obolibrary.org/obo/UBERON_0003126)) +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [tracheal mucosa](http://purl.obolibrary.org/obo/UBERON_0000379) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [trachea](http://purl.obolibrary.org/obo/UBERON_0003126) +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### transverse colon `http://purl.obolibrary.org/obo/UBERON_0001157` -#### Removed -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044684" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Axis_(anatomy)" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of second cervical vertebra" + +- [vertebral arch of second cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200299) SubClassOf [vertebral arch of axis](http://purl.obolibrary.org/obo/UBERON_0000218) + + +### vertebral arch of second lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200300` #### Added -- [transverse colon](http://purl.obolibrary.org/obo/UBERON_0001157) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D044684" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### trapezoid body `http://purl.obolibrary.org/obo/UBERON_0002932` -#### Removed -- [trapezoid body](http://purl.obolibrary.org/obo/UBERON_0002932) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065833" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of second lumbar vertebra" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) SubClassOf [lumbar vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008433) + +- [vertebral arch of second lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200300) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004618) + + +### vertebral arch of second thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200301` #### Added -- [trapezoid body](http://purl.obolibrary.org/obo/UBERON_0002932) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065833" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### trigeminal nuclear complex `http://purl.obolibrary.org/obo/UBERON_0007641` -#### Removed -- [trigeminal nuclear complex](http://purl.obolibrary.org/obo/UBERON_0007641) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014278" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of second thoracic vertebra" + +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of second thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200301) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 2](http://purl.obolibrary.org/obo/UBERON_0004627) + + +### vertebral arch of seventh cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200302` #### Added -- [trigeminal nuclear complex](http://purl.obolibrary.org/obo/UBERON_0007641) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014278" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- Class: [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -### tunica adventitia of blood vessel `http://purl.obolibrary.org/obo/UBERON_0005734` + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of seventh cervical vertebra" + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) SubClassOf [cervical vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008434) + +- [vertebral arch of seventh cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200302) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004616) + + +### vertebral arch of seventh thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200303` #### Added -- [tunica adventitia of blood vessel](http://purl.obolibrary.org/obo/UBERON_0005734) DisjointWith [carotid artery intima-media region](http://purl.obolibrary.org/obo/UBERON_1200002) +- Class: [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -### uncinate fasciculus `http://purl.obolibrary.org/obo/UBERON_0003044` -#### Removed -- [uncinate fasciculus](http://purl.obolibrary.org/obo/UBERON_0003044) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000083382" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of seventh thoracic vertebra" + +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of seventh thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200303) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 7](http://purl.obolibrary.org/obo/UBERON_0004632) + + +### vertebral arch of sixth cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200304` #### Added -- [uncinate fasciculus](http://purl.obolibrary.org/obo/UBERON_0003044) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D000083382" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### upper esophageal sphincter `http://purl.obolibrary.org/obo/UBERON_0007268` -#### Removed -- [upper esophageal sphincter](http://purl.obolibrary.org/obo/UBERON_0007268) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049631" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" + +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of sixth cervical vertebra" + +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) SubClassOf [cervical vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008434) + +- [vertebral arch of sixth cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200304) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004615) + + +### vertebral arch of sixth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200305` #### Added -- [upper esophageal sphincter](http://purl.obolibrary.org/obo/UBERON_0007268) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D049631" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### uterine artery `http://purl.obolibrary.org/obo/UBERON_0002493` -#### Removed -- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055988" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of sixth thoracic vertebra" + +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of sixth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200305) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 6](http://purl.obolibrary.org/obo/UBERON_0004631) + + +### vertebral arch of tenth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200306` #### Added -- [uterine artery](http://purl.obolibrary.org/obo/UBERON_0002493) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055988" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- Class: [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) + +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -### uterine fundus `http://purl.obolibrary.org/obo/UBERON_1200003` +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of tenth thoracic vertebra" + +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) + +- [vertebral arch of tenth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200306) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 10](http://purl.obolibrary.org/obo/UBERON_0004634) + + +### vertebral arch of third cervical vertebra `http://purl.obolibrary.org/obo/UBERON_1200307` #### Added -- Class: [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) +- Class: [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [IAO_0000233](http://purl.obolibrary.org/obo/IAO_0000233) "https://github.com/obophenotype/uberon/issues/3637"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [contributor](http://purl.org/dc/terms/contributor) [0000-0001-6677-8489](https://orcid.org/0000-0001-6677-8489) +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [date](http://purl.org/dc/terms/date) "2025-12-03T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [created_by](http://www.geneontology.org/formats/oboInOwl#created_by) "dragon-ai-agent" +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fundus of uterus" +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [id](http://www.geneontology.org/formats/oboInOwl#id) "UBERON:1200003" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExactSynonym) "fundus uteri" - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:39112955" + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Cervical_vertebrae" - - [hasSynonymType](http://www.geneontology.org/formats/oboInOwl#hasSynonymType) [OMO_0003011](http://purl.obolibrary.org/obo/OMO_0003011) +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of third cervical vertebra" -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "The superior, dome-shaped portion of the uterus." - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:41204538" +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) SubClassOf [cervical vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008434) - - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "PMID:40653088" +- [vertebral arch of third cervical vertebra](http://purl.obolibrary.org/obo/UBERON_1200307) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [mammalian cervical vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004612) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) [label](http://www.w3.org/2000/01/rdf-schema#label) "uterine fundus" -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) SubClassOf [organ part](http://purl.obolibrary.org/obo/UBERON_0000064) +### vertebral arch of third lumbar vertebra `http://purl.obolibrary.org/obo/UBERON_1200308` -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) SubClassOf [reproductive structure](http://purl.obolibrary.org/obo/UBERON_0005156) +#### Added +- Class: [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) -- [uterine fundus](http://purl.obolibrary.org/obo/UBERON_1200003) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [uterus](http://purl.obolibrary.org/obo/UBERON_0000995) +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### vagal lobe `http://purl.obolibrary.org/obo/UBERON_2000297` -#### Removed -- [vagal lobe](http://purl.obolibrary.org/obo/UBERON_2000297) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006431" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Lumbar_vertebrae" + +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of third lumbar vertebra" + +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) SubClassOf [lumbar vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008433) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of third lumbar vertebra](http://purl.obolibrary.org/obo/UBERON_1200308) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lumbar vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004619) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### vertebral arch of third thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200309` #### Added -- [vagal lobe](http://purl.obolibrary.org/obo/UBERON_2000297) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006431" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) -### vaginal fluid `http://purl.obolibrary.org/obo/UBERON_0036243` -#### Removed -- [vaginal fluid](http://purl.obolibrary.org/obo/UBERON_0036243) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003084" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" + +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of third thoracic vertebra" + +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [vertebral arch of third thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200309) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 3](http://purl.obolibrary.org/obo/UBERON_0004628) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### vertebral arch of twelfth thoracic vertebra `http://purl.obolibrary.org/obo/UBERON_1200310` #### Added -- [vaginal fluid](http://purl.obolibrary.org/obo/UBERON_0036243) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0003084" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) + +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Thoracic_vertebrae" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) [label](http://www.w3.org/2000/01/rdf-schema#label) "vertebral arch of twelfth thoracic vertebra" +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) SubClassOf [thoracic vertebral arch](http://purl.obolibrary.org/obo/UBERON_0008436) -### vasa efferentia `http://purl.obolibrary.org/obo/UBERON_3010586` +- [vertebral arch of twelfth thoracic vertebra](http://purl.obolibrary.org/obo/UBERON_1200310) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [thoracic vertebra 12](http://purl.obolibrary.org/obo/UBERON_0004636) + + +### wall of anal canal `http://purl.obolibrary.org/obo/UBERON_0036362` #### Removed -- [vasa efferentia](http://purl.obolibrary.org/obo/UBERON_3010586) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002254" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of anal canal](http://purl.obolibrary.org/obo/UBERON_0036362) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of anal canal](http://purl.obolibrary.org/obo/UBERON_0036362) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [anal canal](http://purl.obolibrary.org/obo/UBERON_0000159) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### wall of appendix `http://purl.obolibrary.org/obo/UBERON_0036337` +#### Removed +- [wall of appendix](http://purl.obolibrary.org/obo/UBERON_0036337) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [vasa efferentia](http://purl.obolibrary.org/obo/UBERON_3010586) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0002254" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of appendix](http://purl.obolibrary.org/obo/UBERON_0036337) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vermiform appendix](http://purl.obolibrary.org/obo/UBERON_0001154) + + +### wall of brachiocephalic artery `http://purl.obolibrary.org/obo/UBERON_0036351` +#### Removed +- [wall of brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0036351) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +#### Added +- [wall of brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0036351) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [brachiocephalic artery](http://purl.obolibrary.org/obo/UBERON_0001529) -### venous blood `http://purl.obolibrary.org/obo/UBERON_0013756` +### wall of central canal of spinal cord `http://purl.obolibrary.org/obo/UBERON_0036658` #### Removed -- [venous blood](http://purl.obolibrary.org/obo/UBERON_0013756) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006187" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0036658) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002291) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0036658) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [central canal of spinal cord](http://purl.obolibrary.org/obo/UBERON_0002291) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +### wall of cerebral aqueduct `http://purl.obolibrary.org/obo/UBERON_0036655` +#### Removed +- [wall of cerebral aqueduct](http://purl.obolibrary.org/obo/UBERON_0036655) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [midbrain cerebral aqueduct](http://purl.obolibrary.org/obo/UBERON_0002289) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [venous blood](http://purl.obolibrary.org/obo/UBERON_0013756) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006187" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of cerebral aqueduct](http://purl.obolibrary.org/obo/UBERON_0036655) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [midbrain cerebral aqueduct](http://purl.obolibrary.org/obo/UBERON_0002289) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) + +### wall of common carotid artery `http://purl.obolibrary.org/obo/UBERON_0037094` +#### Removed +- [wall of common carotid artery](http://purl.obolibrary.org/obo/UBERON_0037094) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001530) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of common carotid artery](http://purl.obolibrary.org/obo/UBERON_0037094) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [common carotid artery plus branches](http://purl.obolibrary.org/obo/UBERON_0001530) -### venous valve `http://purl.obolibrary.org/obo/UBERON_0006675` +### wall of coronary artery `http://purl.obolibrary.org/obo/UBERON_0036328` #### Removed -- [venous valve](http://purl.obolibrary.org/obo/UBERON_0006675) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055422" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of coronary artery](http://purl.obolibrary.org/obo/UBERON_0036328) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [coronary artery](http://purl.obolibrary.org/obo/UBERON_0001621) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [wall of coronary artery](http://purl.obolibrary.org/obo/UBERON_0036328) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [coronary artery](http://purl.obolibrary.org/obo/UBERON_0001621) + + +### wall of eyeball `http://purl.obolibrary.org/obo/UBERON_0036925` +#### Removed +- [wall of eyeball](http://purl.obolibrary.org/obo/UBERON_0036925) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of eyeball](http://purl.obolibrary.org/obo/UBERON_0036925) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [eyeball of camera-type eye](http://purl.obolibrary.org/obo/UBERON_0010230) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [venous valve](http://purl.obolibrary.org/obo/UBERON_0006675) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055422" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of eyeball](http://purl.obolibrary.org/obo/UBERON_0036925) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of eyeball](http://purl.obolibrary.org/obo/UBERON_0036925) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [eyeball of camera-type eye](http://purl.obolibrary.org/obo/UBERON_0010230) -### ventral nuclear group `http://purl.obolibrary.org/obo/UBERON_0002776` +### wall of fallopian tube `http://purl.obolibrary.org/obo/UBERON_0036441` #### Removed -- [ventral nuclear group](http://purl.obolibrary.org/obo/UBERON_0002776) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D020651" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of fallopian tube](http://purl.obolibrary.org/obo/UBERON_0036441) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of fallopian tube](http://purl.obolibrary.org/obo/UBERON_0036441) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [ventral nuclear group](http://purl.obolibrary.org/obo/UBERON_0002776) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D020651" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of fallopian tube](http://purl.obolibrary.org/obo/UBERON_0036441) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) +- [wall of fallopian tube](http://purl.obolibrary.org/obo/UBERON_0036441) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fallopian tube](http://purl.obolibrary.org/obo/UBERON_0003889) -### ventral striatum `http://purl.obolibrary.org/obo/UBERON_0005403` + +### wall of female urethra `http://purl.obolibrary.org/obo/UBERON_0037455` #### Removed -- [ventral striatum](http://purl.obolibrary.org/obo/UBERON_0005403) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066328" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of female urethra](http://purl.obolibrary.org/obo/UBERON_0037455) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [female urethra](http://purl.obolibrary.org/obo/UBERON_0001334) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of female urethra](http://purl.obolibrary.org/obo/UBERON_0037455) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [female urethra](http://purl.obolibrary.org/obo/UBERON_0001334) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### wall of fourth ventricle `http://purl.obolibrary.org/obo/UBERON_0036657` +#### Removed +- [wall of fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0036657) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [ventral striatum](http://purl.obolibrary.org/obo/UBERON_0005403) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) +- [wall of fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0036657) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [fourth ventricle](http://purl.obolibrary.org/obo/UBERON_0002422) -- [ventral striatum](http://purl.obolibrary.org/obo/UBERON_0005403) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [human_reference_atlas](http://purl.obolibrary.org/obo/uberon/core#human_reference_atlas) -- [ventral striatum](http://purl.obolibrary.org/obo/UBERON_0005403) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066328" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +### wall of gallbladder `http://purl.obolibrary.org/obo/UBERON_0036343` +#### Removed +- [wall of gallbladder](http://purl.obolibrary.org/obo/UBERON_0036343) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [gallbladder](http://purl.obolibrary.org/obo/UBERON_0002110) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +#### Added +- [wall of gallbladder](http://purl.obolibrary.org/obo/UBERON_0036343) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [gallbladder](http://purl.obolibrary.org/obo/UBERON_0002110) -### vertebra `http://purl.obolibrary.org/obo/UBERON_0002412` +### wall of heart `http://purl.obolibrary.org/obo/UBERON_0037144` #### Removed -- [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006196" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of heart](http://purl.obolibrary.org/obo/UBERON_0037144) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) - - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [wall of heart](http://purl.obolibrary.org/obo/UBERON_0037144) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [vertebra](http://purl.obolibrary.org/obo/UBERON_0002412) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "BTO:0006196" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of heart](http://purl.obolibrary.org/obo/UBERON_0037144) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [wall of heart](http://purl.obolibrary.org/obo/UBERON_0037144) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart](http://purl.obolibrary.org/obo/UBERON_0000948) -### vertebral canal `http://purl.obolibrary.org/obo/UBERON_0006692` +### wall of lacrimal duct `http://purl.obolibrary.org/obo/UBERON_0037237` #### Removed -- [vertebral canal](http://purl.obolibrary.org/obo/UBERON_0006692) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013115" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of lacrimal duct](http://purl.obolibrary.org/obo/UBERON_0037237) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +- [wall of lacrimal duct](http://purl.obolibrary.org/obo/UBERON_0037237) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lacrimal drainage system](http://purl.obolibrary.org/obo/UBERON_0001850) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of lacrimal duct](http://purl.obolibrary.org/obo/UBERON_0037237) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + +- [wall of lacrimal duct](http://purl.obolibrary.org/obo/UBERON_0037237) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [lacrimal drainage system](http://purl.obolibrary.org/obo/UBERON_0001850) + - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +### wall of lateral ventricle `http://purl.obolibrary.org/obo/UBERON_0036654` +#### Removed +- [wall of lateral ventricle](http://purl.obolibrary.org/obo/UBERON_0036654) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [telencephalic ventricle](http://purl.obolibrary.org/obo/UBERON_0002285) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [vertebral canal](http://purl.obolibrary.org/obo/UBERON_0006692) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D013115" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of lateral ventricle](http://purl.obolibrary.org/obo/UBERON_0036654) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [telencephalic ventricle](http://purl.obolibrary.org/obo/UBERON_0002285) -### vestibular labyrinth `http://purl.obolibrary.org/obo/UBERON_0001862` +### wall of left ureter `http://purl.obolibrary.org/obo/UBERON_0036376` #### Removed -- [vestibular labyrinth](http://purl.obolibrary.org/obo/UBERON_0001862) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014722" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of left ureter](http://purl.obolibrary.org/obo/UBERON_0036376) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of left ureter](http://purl.obolibrary.org/obo/UBERON_0036376) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [left ureter](http://purl.obolibrary.org/obo/UBERON_0001223) + - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### wall of left ventricle `http://purl.obolibrary.org/obo/UBERON_0036285` +#### Removed +- [wall of left ventricle](http://purl.obolibrary.org/obo/UBERON_0036285) SubClassOf [heart ventricle wall](http://purl.obolibrary.org/obo/UBERON_0004784) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of left ventricle](http://purl.obolibrary.org/obo/UBERON_0036285) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [vestibular labyrinth](http://purl.obolibrary.org/obo/UBERON_0001862) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014722" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of left ventricle](http://purl.obolibrary.org/obo/UBERON_0036285) SubClassOf [heart ventricle wall](http://purl.obolibrary.org/obo/UBERON_0004784) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of left ventricle](http://purl.obolibrary.org/obo/UBERON_0036285) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart left ventricle](http://purl.obolibrary.org/obo/UBERON_0002084) -### vestibular nerve `http://purl.obolibrary.org/obo/UBERON_0003723` +### wall of male urethra `http://purl.obolibrary.org/obo/UBERON_0037447` #### Removed -- [vestibular nerve](http://purl.obolibrary.org/obo/UBERON_0003723) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "DHBA:12869" +- [wall of male urethra](http://purl.obolibrary.org/obo/UBERON_0037447) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male urethra](http://purl.obolibrary.org/obo/UBERON_0001333) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" +#### Added +- [wall of male urethra](http://purl.obolibrary.org/obo/UBERON_0037447) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [male urethra](http://purl.obolibrary.org/obo/UBERON_0001333) -### vitreous humor `http://purl.obolibrary.org/obo/UBERON_0001797` +### wall of membranous labyrinth `http://purl.obolibrary.org/obo/UBERON_0037191` #### Removed -- [vitreous humor](http://purl.obolibrary.org/obo/UBERON_0001797) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014822" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0037191) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0037191) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001849) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [vitreous humor](http://purl.obolibrary.org/obo/UBERON_0001797) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014822" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0037191) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) +- [wall of membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0037191) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [membranous labyrinth](http://purl.obolibrary.org/obo/UBERON_0001849) -### vomer `http://purl.obolibrary.org/obo/UBERON_0002396` + +### wall of orbit `http://purl.obolibrary.org/obo/UBERON_0037089` #### Removed -- [vomer](http://purl.obolibrary.org/obo/UBERON_0002396) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055172" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of orbit](http://purl.obolibrary.org/obo/UBERON_0037089) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [orbit of skull](http://purl.obolibrary.org/obo/UBERON_0001697) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of orbit](http://purl.obolibrary.org/obo/UBERON_0037089) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [orbit of skull](http://purl.obolibrary.org/obo/UBERON_0001697) + - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### wall of pharyngotympanic tube `http://purl.obolibrary.org/obo/UBERON_0036990` +#### Removed +- [wall of pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0036990) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0036990) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0002393) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [vomer](http://purl.obolibrary.org/obo/UBERON_0002396) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D055172" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0036990) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + +- [wall of pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0036990) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pharyngotympanic tube](http://purl.obolibrary.org/obo/UBERON_0002393) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) + +### wall of pulmonary artery `http://purl.obolibrary.org/obo/UBERON_0036422` +#### Removed +- [wall of pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0036422) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0036422) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [pulmonary artery](http://purl.obolibrary.org/obo/UBERON_0002012) -### white adipose tissue `http://purl.obolibrary.org/obo/UBERON_0001347` +### wall of right ureter `http://purl.obolibrary.org/obo/UBERON_0036375` #### Removed -- [white adipose tissue](http://purl.obolibrary.org/obo/UBERON_0001347) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052436" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of right ureter](http://purl.obolibrary.org/obo/UBERON_0036375) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +#### Added +- [wall of right ureter](http://purl.obolibrary.org/obo/UBERON_0036375) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [right ureter](http://purl.obolibrary.org/obo/UBERON_0001222) + + +### wall of right ventricle `http://purl.obolibrary.org/obo/UBERON_0036286` +#### Removed +- [wall of right ventricle](http://purl.obolibrary.org/obo/UBERON_0036286) SubClassOf [heart ventricle wall](http://purl.obolibrary.org/obo/UBERON_0004784) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of right ventricle](http://purl.obolibrary.org/obo/UBERON_0036286) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [white adipose tissue](http://purl.obolibrary.org/obo/UBERON_0001347) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D052436" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of right ventricle](http://purl.obolibrary.org/obo/UBERON_0036286) SubClassOf [heart ventricle wall](http://purl.obolibrary.org/obo/UBERON_0004784) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of right ventricle](http://purl.obolibrary.org/obo/UBERON_0036286) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [heart right ventricle](http://purl.obolibrary.org/obo/UBERON_0002080) -### white matter `http://purl.obolibrary.org/obo/UBERON_0002316` +### wall of subclavian artery `http://purl.obolibrary.org/obo/UBERON_0036352` #### Removed -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066127" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of subclavian artery](http://purl.obolibrary.org/obo/UBERON_0036352) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of subclavian artery](http://purl.obolibrary.org/obo/UBERON_0036352) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [subclavian artery](http://purl.obolibrary.org/obo/UBERON_0001533) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### wall of synovial tendon sheath `http://purl.obolibrary.org/obo/UBERON_0036553` +#### Removed +- [wall of synovial tendon sheath](http://purl.obolibrary.org/obo/UBERON_0036553) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tendon sheath](http://purl.obolibrary.org/obo/UBERON_0000304) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [white matter](http://purl.obolibrary.org/obo/UBERON_0002316) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D066127" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of synovial tendon sheath](http://purl.obolibrary.org/obo/UBERON_0036553) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [tendon sheath](http://purl.obolibrary.org/obo/UBERON_0000304) + - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +### wall of third ventricle `http://purl.obolibrary.org/obo/UBERON_0036656` +#### Removed +- [wall of third ventricle](http://purl.obolibrary.org/obo/UBERON_0036656) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [third ventricle](http://purl.obolibrary.org/obo/UBERON_0002286) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of third ventricle](http://purl.obolibrary.org/obo/UBERON_0036656) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [third ventricle](http://purl.obolibrary.org/obo/UBERON_0002286) -### xiphoid process `http://purl.obolibrary.org/obo/UBERON_0002207` +### wall of urethra `http://purl.obolibrary.org/obo/UBERON_0036521` #### Removed -- [xiphoid process](http://purl.obolibrary.org/obo/UBERON_0002207) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014989" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [wall of urethra](http://purl.obolibrary.org/obo/UBERON_0036521) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of urethra](http://purl.obolibrary.org/obo/UBERON_0036521) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [xiphoid process](http://purl.obolibrary.org/obo/UBERON_0002207) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D014989" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [LexicalMatching](https://w3id.org/semapv/vocab/LexicalMatching) +- [wall of urethra](http://purl.obolibrary.org/obo/UBERON_0036521) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) +- [wall of urethra](http://purl.obolibrary.org/obo/UBERON_0036521) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [urethra](http://purl.obolibrary.org/obo/UBERON_0000057) -### zona incerta `http://purl.obolibrary.org/obo/UBERON_0001907` -#### Removed -- [zona incerta](http://purl.obolibrary.org/obo/UBERON_0001907) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065820" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +### wall of vagina `http://purl.obolibrary.org/obo/UBERON_0036523` +#### Removed +- [wall of vagina](http://purl.obolibrary.org/obo/UBERON_0036523) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of vagina](http://purl.obolibrary.org/obo/UBERON_0036523) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" #### Added -- [zona incerta](http://purl.obolibrary.org/obo/UBERON_0001907) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "MESH:D065820" - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0001-9439-5346](https://orcid.org/0000-0001-9439-5346) +- [wall of vagina](http://purl.obolibrary.org/obo/UBERON_0036523) SubClassOf [anatomical wall](http://purl.obolibrary.org/obo/UBERON_0000060) - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [wall of vagina](http://purl.obolibrary.org/obo/UBERON_0036523) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [vagina](http://purl.obolibrary.org/obo/UBERON_0000996) -### zygote stage `http://purl.obolibrary.org/obo/UBERON_0000106` +### wall of ventricular system of brain `http://purl.obolibrary.org/obo/UBERON_0036661` +#### Removed +- [wall of ventricular system of brain](http://purl.obolibrary.org/obo/UBERON_0036661) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ventricular system of brain](http://purl.obolibrary.org/obo/UBERON_0005282) + - [source](http://www.geneontology.org/formats/oboInOwl#source) "FMA" + +#### Added +- [wall of ventricular system of brain](http://purl.obolibrary.org/obo/UBERON_0036661) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [ventricular system of brain](http://purl.obolibrary.org/obo/UBERON_0005282) + + +### zoea stage `http://purl.obolibrary.org/obo/UBERON_0014857` #### Removed -- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000302" - - [mapping_provider](https://w3id.org/sssom/mapping_provider) "https://github.com/biopragmatics/biomappings"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI) +- [zoea stage](http://purl.obolibrary.org/obo/UBERON_0014857) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) + + + +### zygomatic process of squamous part of temporal bone `http://purl.obolibrary.org/obo/UBERON_1200338` + +#### Added +- Class: [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) + +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Temporal_bone" + +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) [label](http://www.w3.org/2000/01/rdf-schema#label) "zygomatic process of squamous part of temporal bone" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) SubClassOf [skeletal element projection](http://purl.obolibrary.org/obo/UBERON_4100000) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) +- [zygomatic process of squamous part of temporal bone](http://purl.obolibrary.org/obo/UBERON_1200338) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [temporal bone](http://purl.obolibrary.org/obo/UBERON_0001678) + + +### zygomaticofacial foramen of zygomatic bone `http://purl.obolibrary.org/obo/UBERON_1200339` #### Added -- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "IDOMAL:0000302" - - [mapping_justification](https://w3id.org/sssom/mapping_justification) [ManualMappingCuration](https://w3id.org/semapv/vocab/ManualMappingCuration) +- Class: [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) [RO_0002175](http://purl.obolibrary.org/obo/RO_0002175) [NCBITaxon_9606](http://purl.obolibrary.org/obo/NCBITaxon_9606) + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) [contributor](http://purl.org/dc/terms/contributor) [0000-0002-7073-9172](https://orcid.org/0000-0002-7073-9172) + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) [date](http://purl.org/dc/terms/date) "2026-03-19T00:00:00Z"^^[dateTime](http://www.w3.org/2001/XMLSchema#dateTime) + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) [inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) [added_by_HRA](http://purl.obolibrary.org/obo/uberon/core#added_by_HRA) + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) [IAO_0000115](http://purl.obolibrary.org/obo/IAO_0000115) "A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek." + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "Wikipedia:Zygomatic_bone" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "https://fipat.library.dal.ca/ta2/" + + - [hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) "ISBN:9780323393225" + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) [label](http://www.w3.org/2000/01/rdf-schema#label) "zygomaticofacial foramen of zygomatic bone" + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) SubClassOf [orbital fissure](http://purl.obolibrary.org/obo/UBERON_0006271) + +- [zygomaticofacial foramen of zygomatic bone](http://purl.obolibrary.org/obo/UBERON_1200339) SubClassOf [BFO_0000050](http://purl.obolibrary.org/obo/BFO_0000050) some [jugal bone](http://purl.obolibrary.org/obo/UBERON_0001683) + + +### zygote stage `http://purl.obolibrary.org/obo/UBERON_0000106` +#### Removed +- [zygote stage](http://purl.obolibrary.org/obo/UBERON_0000106) SubClassOf [BFO_0000003](http://purl.obolibrary.org/obo/BFO_0000003) - - [authoredBy](http://purl.org/pav/authoredBy) [0000-0003-4423-4370](https://orcid.org/0000-0003-4423-4370) diff --git a/src/ontology/reports/uberon-edit.obo-obo-report.tsv b/src/ontology/reports/uberon-edit.obo-obo-report.tsv index f97fc275e..5631dc98a 100644 --- a/src/ontology/reports/uberon-edit.obo-obo-report.tsv +++ b/src/ontology/reports/uberon-edit.obo-obo-report.tsv @@ -4872,13 +4872,13 @@ INFO lowercase_definition obo:uberon/core#indirectly_supplies IAO:0000115 a indi INFO lowercase_definition obo:uberon/core#posteriorly_connected_to IAO:0000115 x posteriorly_connected_to y iff the posterior part of x is connected to y. i.e. x connected_to y and x anterior_to y. INFO lowercase_definition obo:uberon/core#proximally_connected_to IAO:0000115 x proximally_connected_to y iff the proximal part of x is connected to y. i.e. x connected_to y and x distal_to y. INFO lowercase_definition obo:uberon/core#site_of IAO:0000115 c site_of p if c is the bearer of a disposition that is realized by a process that has p as part. -INFO missing_superclass UBERON:0000000 rdfs:subClassOf INFO missing_superclass UBERON:0000024 rdfs:subClassOf INFO missing_superclass UBERON:0000039 rdfs:subClassOf INFO missing_superclass UBERON:0000072 rdfs:subClassOf INFO missing_superclass UBERON:0000073 rdfs:subClassOf INFO missing_superclass UBERON:0000077 rdfs:subClassOf INFO missing_superclass UBERON:0000078 rdfs:subClassOf +INFO missing_superclass UBERON:0000079 rdfs:subClassOf INFO missing_superclass UBERON:0000083 rdfs:subClassOf INFO missing_superclass UBERON:0000102 rdfs:subClassOf INFO missing_superclass UBERON:0000126 rdfs:subClassOf @@ -4897,14 +4897,18 @@ INFO missing_superclass UBERON:0000323 rdfs:subClassOf INFO missing_superclass UBERON:0000326 rdfs:subClassOf INFO missing_superclass UBERON:0000328 rdfs:subClassOf INFO missing_superclass UBERON:0000331 rdfs:subClassOf +INFO missing_superclass UBERON:0000333 rdfs:subClassOf INFO missing_superclass UBERON:0000355 rdfs:subClassOf INFO missing_superclass UBERON:0000379 rdfs:subClassOf +INFO missing_superclass UBERON:0000397 rdfs:subClassOf INFO missing_superclass UBERON:0000398 rdfs:subClassOf INFO missing_superclass UBERON:0000399 rdfs:subClassOf INFO missing_superclass UBERON:0000410 rdfs:subClassOf INFO missing_superclass UBERON:0000415 rdfs:subClassOf INFO missing_superclass UBERON:0000456 rdfs:subClassOf INFO missing_superclass UBERON:0000457 rdfs:subClassOf +INFO missing_superclass UBERON:0000459 rdfs:subClassOf +INFO missing_superclass UBERON:0000474 rdfs:subClassOf INFO missing_superclass UBERON:0000478 rdfs:subClassOf INFO missing_superclass UBERON:0000487 rdfs:subClassOf INFO missing_superclass UBERON:0000489 rdfs:subClassOf @@ -4912,14 +4916,20 @@ INFO missing_superclass UBERON:0000922 rdfs:subClassOf INFO missing_superclass UBERON:0000934 rdfs:subClassOf INFO missing_superclass UBERON:0000951 rdfs:subClassOf INFO missing_superclass UBERON:0000957 rdfs:subClassOf +INFO missing_superclass UBERON:0000959 rdfs:subClassOf INFO missing_superclass UBERON:0000962 rdfs:subClassOf INFO missing_superclass UBERON:0000963 rdfs:subClassOf +INFO missing_superclass UBERON:0000984 rdfs:subClassOf INFO missing_superclass UBERON:0001010 rdfs:subClassOf INFO missing_superclass UBERON:0001028 rdfs:subClassOf INFO missing_superclass UBERON:0001062 rdfs:subClassOf INFO missing_superclass UBERON:0001066 rdfs:subClassOf +INFO missing_superclass UBERON:0001082 rdfs:subClassOf +INFO missing_superclass UBERON:0001084 rdfs:subClassOf +INFO missing_superclass UBERON:0001085 rdfs:subClassOf INFO missing_superclass UBERON:0001088 rdfs:subClassOf INFO missing_superclass UBERON:0001095 rdfs:subClassOf +INFO missing_superclass UBERON:0001096 rdfs:subClassOf INFO missing_superclass UBERON:0001119 rdfs:subClassOf INFO missing_superclass UBERON:0001120 rdfs:subClassOf INFO missing_superclass UBERON:0001141 rdfs:subClassOf @@ -4943,10 +4953,12 @@ INFO missing_superclass UBERON:0001223 rdfs:subClassOf INFO missing_superclass UBERON:0001233 rdfs:subClassOf INFO missing_superclass UBERON:0001234 rdfs:subClassOf INFO missing_superclass UBERON:0001248 rdfs:subClassOf +INFO missing_superclass UBERON:0001256 rdfs:subClassOf INFO missing_superclass UBERON:0001262 rdfs:subClassOf INFO missing_superclass UBERON:0001302 rdfs:subClassOf INFO missing_superclass UBERON:0001303 rdfs:subClassOf INFO missing_superclass UBERON:0001304 rdfs:subClassOf +INFO missing_superclass UBERON:0001307 rdfs:subClassOf INFO missing_superclass UBERON:0001328 rdfs:subClassOf INFO missing_superclass UBERON:0001333 rdfs:subClassOf INFO missing_superclass UBERON:0001334 rdfs:subClassOf @@ -4960,10 +4972,13 @@ INFO missing_superclass UBERON:0001417 rdfs:subClassOf INFO missing_superclass UBERON:0001418 rdfs:subClassOf INFO missing_superclass UBERON:0001419 rdfs:subClassOf INFO missing_superclass UBERON:0001425 rdfs:subClassOf +INFO missing_superclass UBERON:0001455 rdfs:subClassOf INFO missing_superclass UBERON:0001457 rdfs:subClassOf +INFO missing_superclass UBERON:0001458 rdfs:subClassOf INFO missing_superclass UBERON:0001472 rdfs:subClassOf INFO missing_superclass UBERON:0001483 rdfs:subClassOf INFO missing_superclass UBERON:0001484 rdfs:subClassOf +INFO missing_superclass UBERON:0001554 rdfs:subClassOf INFO missing_superclass UBERON:0001583 rdfs:subClassOf INFO missing_superclass UBERON:0001592 rdfs:subClassOf INFO missing_superclass UBERON:0001612 rdfs:subClassOf @@ -4973,11 +4988,14 @@ INFO missing_superclass UBERON:0001617 rdfs:subClassOf INFO missing_superclass UBERON:0001618 rdfs:subClassOf INFO missing_superclass UBERON:0001635 rdfs:subClassOf INFO missing_superclass UBERON:0001644 rdfs:subClassOf +INFO missing_superclass UBERON:0001668 rdfs:subClassOf INFO missing_superclass UBERON:0001674 rdfs:subClassOf +INFO missing_superclass UBERON:0001725 rdfs:subClassOf INFO missing_superclass UBERON:0001746 rdfs:subClassOf INFO missing_superclass UBERON:0001800 rdfs:subClassOf INFO missing_superclass UBERON:0001813 rdfs:subClassOf INFO missing_superclass UBERON:0001816 rdfs:subClassOf +INFO missing_superclass UBERON:0001824 rdfs:subClassOf INFO missing_superclass UBERON:0001848 rdfs:subClassOf INFO missing_superclass UBERON:0001857 rdfs:subClassOf INFO missing_superclass UBERON:0001858 rdfs:subClassOf @@ -4986,7 +5004,12 @@ INFO missing_superclass UBERON:0001870 rdfs:subClassOf INFO missing_superclass UBERON:0001888 rdfs:subClassOf INFO missing_superclass UBERON:0001889 rdfs:subClassOf INFO missing_superclass UBERON:0001892 rdfs:subClassOf +INFO missing_superclass UBERON:0001915 rdfs:subClassOf +INFO missing_superclass UBERON:0001916 rdfs:subClassOf +INFO missing_superclass UBERON:0001918 rdfs:subClassOf +INFO missing_superclass UBERON:0001919 rdfs:subClassOf INFO missing_superclass UBERON:0001948 rdfs:subClassOf +INFO missing_superclass UBERON:0001957 rdfs:subClassOf INFO missing_superclass UBERON:0001962 rdfs:subClassOf INFO missing_superclass UBERON:0001969 rdfs:subClassOf INFO missing_superclass UBERON:0001971 rdfs:subClassOf @@ -5000,30 +5023,44 @@ INFO missing_superclass UBERON:0002050 rdfs:subClassOf INFO missing_superclass UBERON:0002056 rdfs:subClassOf INFO missing_superclass UBERON:0002057 rdfs:subClassOf INFO missing_superclass UBERON:0002085 rdfs:subClassOf +INFO missing_superclass UBERON:0002092 rdfs:subClassOf +INFO missing_superclass UBERON:0002093 rdfs:subClassOf INFO missing_superclass UBERON:0002094 rdfs:subClassOf +INFO missing_superclass UBERON:0002111 rdfs:subClassOf INFO missing_superclass UBERON:0002118 rdfs:subClassOf INFO missing_superclass UBERON:0002119 rdfs:subClassOf +INFO missing_superclass UBERON:0002122 rdfs:subClassOf +INFO missing_superclass UBERON:0002124 rdfs:subClassOf INFO missing_superclass UBERON:0002146 rdfs:subClassOf INFO missing_superclass UBERON:0002167 rdfs:subClassOf INFO missing_superclass UBERON:0002168 rdfs:subClassOf INFO missing_superclass UBERON:0002177 rdfs:subClassOf INFO missing_superclass UBERON:0002178 rdfs:subClassOf INFO missing_superclass UBERON:0002195 rdfs:subClassOf +INFO missing_superclass UBERON:0002200 rdfs:subClassOf +INFO missing_superclass UBERON:0002201 rdfs:subClassOf +INFO missing_superclass UBERON:0002202 rdfs:subClassOf +INFO missing_superclass UBERON:0002213 rdfs:subClassOf INFO missing_superclass UBERON:0002215 rdfs:subClassOf INFO missing_superclass UBERON:0002224 rdfs:subClassOf INFO missing_superclass UBERON:0002237 rdfs:subClassOf +INFO missing_superclass UBERON:0002288 rdfs:subClassOf INFO missing_superclass UBERON:0002304 rdfs:subClassOf INFO missing_superclass UBERON:0002306 rdfs:subClassOf +INFO missing_superclass UBERON:0002307 rdfs:subClassOf INFO missing_superclass UBERON:0002327 rdfs:subClassOf INFO missing_superclass UBERON:0002337 rdfs:subClassOf +INFO missing_superclass UBERON:0002343 rdfs:subClassOf INFO missing_superclass UBERON:0002408 rdfs:subClassOf INFO missing_superclass UBERON:0002426 rdfs:subClassOf INFO missing_superclass UBERON:0002427 rdfs:subClassOf INFO missing_superclass UBERON:0002429 rdfs:subClassOf INFO missing_superclass UBERON:0002437 rdfs:subClassOf INFO missing_superclass UBERON:0002442 rdfs:subClassOf +INFO missing_superclass UBERON:0002443 rdfs:subClassOf INFO missing_superclass UBERON:0002459 rdfs:subClassOf INFO missing_superclass UBERON:0002466 rdfs:subClassOf +INFO missing_superclass UBERON:0002507 rdfs:subClassOf INFO missing_superclass UBERON:0002510 rdfs:subClassOf INFO missing_superclass UBERON:0002519 rdfs:subClassOf INFO missing_superclass UBERON:0002576 rdfs:subClassOf @@ -5031,7 +5068,9 @@ INFO missing_superclass UBERON:0002615 rdfs:subClassOf INFO missing_superclass UBERON:0002642 rdfs:subClassOf INFO missing_superclass UBERON:0002653 rdfs:subClassOf INFO missing_superclass UBERON:0002667 rdfs:subClassOf +INFO missing_superclass UBERON:0002713 rdfs:subClassOf INFO missing_superclass UBERON:0002749 rdfs:subClassOf +INFO missing_superclass UBERON:0002750 rdfs:subClassOf INFO missing_superclass UBERON:0002792 rdfs:subClassOf INFO missing_superclass UBERON:0002794 rdfs:subClassOf INFO missing_superclass UBERON:0002795 rdfs:subClassOf @@ -5045,14 +5084,19 @@ INFO missing_superclass UBERON:0002834 rdfs:subClassOf INFO missing_superclass UBERON:0002835 rdfs:subClassOf INFO missing_superclass UBERON:0002836 rdfs:subClassOf INFO missing_superclass UBERON:0002837 rdfs:subClassOf +INFO missing_superclass UBERON:0002867 rdfs:subClassOf INFO missing_superclass UBERON:0002893 rdfs:subClassOf INFO missing_superclass UBERON:0002899 rdfs:subClassOf +INFO missing_superclass UBERON:0002902 rdfs:subClassOf +INFO missing_superclass UBERON:0003028 rdfs:subClassOf +INFO missing_superclass UBERON:0003030 rdfs:subClassOf INFO missing_superclass UBERON:0003041 rdfs:subClassOf INFO missing_superclass UBERON:0003121 rdfs:subClassOf INFO missing_superclass UBERON:0003122 rdfs:subClassOf INFO missing_superclass UBERON:0003123 rdfs:subClassOf INFO missing_superclass UBERON:0003218 rdfs:subClassOf INFO missing_superclass UBERON:0003219 rdfs:subClassOf +INFO missing_superclass UBERON:0003224 rdfs:subClassOf INFO missing_superclass UBERON:0003235 rdfs:subClassOf INFO missing_superclass UBERON:0003236 rdfs:subClassOf INFO missing_superclass UBERON:0003238 rdfs:subClassOf @@ -5076,6 +5120,7 @@ INFO missing_superclass UBERON:0003289 rdfs:subClassOf INFO missing_superclass UBERON:0003290 rdfs:subClassOf INFO missing_superclass UBERON:0003292 rdfs:subClassOf INFO missing_superclass UBERON:0003294 rdfs:subClassOf +INFO missing_superclass UBERON:0003295 rdfs:subClassOf INFO missing_superclass UBERON:0003296 rdfs:subClassOf INFO missing_superclass UBERON:0003297 rdfs:subClassOf INFO missing_superclass UBERON:0003300 rdfs:subClassOf @@ -5114,6 +5159,7 @@ INFO missing_superclass UBERON:0003342 rdfs:subClassOf INFO missing_superclass UBERON:0003343 rdfs:subClassOf INFO missing_superclass UBERON:0003346 rdfs:subClassOf INFO missing_superclass UBERON:0003350 rdfs:subClassOf +INFO missing_superclass UBERON:0003352 rdfs:subClassOf INFO missing_superclass UBERON:0003353 rdfs:subClassOf INFO missing_superclass UBERON:0003354 rdfs:subClassOf INFO missing_superclass UBERON:0003355 rdfs:subClassOf @@ -5129,6 +5175,7 @@ INFO missing_superclass UBERON:0003365 rdfs:subClassOf INFO missing_superclass UBERON:0003366 rdfs:subClassOf INFO missing_superclass UBERON:0003368 rdfs:subClassOf INFO missing_superclass UBERON:0003373 rdfs:subClassOf +INFO missing_superclass UBERON:0003374 rdfs:subClassOf INFO missing_superclass UBERON:0003379 rdfs:subClassOf INFO missing_superclass UBERON:0003380 rdfs:subClassOf INFO missing_superclass UBERON:0003381 rdfs:subClassOf @@ -5190,6 +5237,7 @@ INFO missing_superclass UBERON:0003456 rdfs:subClassOf INFO missing_superclass UBERON:0003457 rdfs:subClassOf INFO missing_superclass UBERON:0003458 rdfs:subClassOf INFO missing_superclass UBERON:0003459 rdfs:subClassOf +INFO missing_superclass UBERON:0003462 rdfs:subClassOf INFO missing_superclass UBERON:0003463 rdfs:subClassOf INFO missing_superclass UBERON:0003469 rdfs:subClassOf INFO missing_superclass UBERON:0003473 rdfs:subClassOf @@ -5316,6 +5364,7 @@ INFO missing_superclass UBERON:0003848 rdfs:subClassOf INFO missing_superclass UBERON:0003850 rdfs:subClassOf INFO missing_superclass UBERON:0003851 rdfs:subClassOf INFO missing_superclass UBERON:0003853 rdfs:subClassOf +INFO missing_superclass UBERON:0003854 rdfs:subClassOf INFO missing_superclass UBERON:0003855 rdfs:subClassOf INFO missing_superclass UBERON:0003859 rdfs:subClassOf INFO missing_superclass UBERON:0003860 rdfs:subClassOf @@ -5335,11 +5384,13 @@ INFO missing_superclass UBERON:0003933 rdfs:subClassOf INFO missing_superclass UBERON:0003934 rdfs:subClassOf INFO missing_superclass UBERON:0003935 rdfs:subClassOf INFO missing_superclass UBERON:0003937 rdfs:subClassOf +INFO missing_superclass UBERON:0003970 rdfs:subClassOf INFO missing_superclass UBERON:0003975 rdfs:subClassOf INFO missing_superclass UBERON:0003980 rdfs:subClassOf INFO missing_superclass UBERON:0004015 rdfs:subClassOf INFO missing_superclass UBERON:0004041 rdfs:subClassOf INFO missing_superclass UBERON:0004109 rdfs:subClassOf +INFO missing_superclass UBERON:0004118 rdfs:subClassOf INFO missing_superclass UBERON:0004119 rdfs:subClassOf INFO missing_superclass UBERON:0004120 rdfs:subClassOf INFO missing_superclass UBERON:0004121 rdfs:subClassOf @@ -5396,6 +5447,7 @@ INFO missing_superclass UBERON:0004271 rdfs:subClassOf INFO missing_superclass UBERON:0004273 rdfs:subClassOf INFO missing_superclass UBERON:0004274 rdfs:subClassOf INFO missing_superclass UBERON:0004295 rdfs:subClassOf +INFO missing_superclass UBERON:0004296 rdfs:subClassOf INFO missing_superclass UBERON:0004297 rdfs:subClassOf INFO missing_superclass UBERON:0004302 rdfs:subClassOf INFO missing_superclass UBERON:0004370 rdfs:subClassOf @@ -5492,6 +5544,7 @@ INFO missing_superclass UBERON:0004488 rdfs:subClassOf INFO missing_superclass UBERON:0004489 rdfs:subClassOf INFO missing_superclass UBERON:0004491 rdfs:subClassOf INFO missing_superclass UBERON:0004492 rdfs:subClassOf +INFO missing_superclass UBERON:0004493 rdfs:subClassOf INFO missing_superclass UBERON:0004494 rdfs:subClassOf INFO missing_superclass UBERON:0004495 rdfs:subClassOf INFO missing_superclass UBERON:0004496 rdfs:subClassOf @@ -5560,6 +5613,7 @@ INFO missing_superclass UBERON:0004766 rdfs:subClassOf INFO missing_superclass UBERON:0004773 rdfs:subClassOf INFO missing_superclass UBERON:0004774 rdfs:subClassOf INFO missing_superclass UBERON:0004778 rdfs:subClassOf +INFO missing_superclass UBERON:0004782 rdfs:subClassOf INFO missing_superclass UBERON:0004783 rdfs:subClassOf INFO missing_superclass UBERON:0004784 rdfs:subClassOf INFO missing_superclass UBERON:0004785 rdfs:subClassOf @@ -5733,10 +5787,12 @@ INFO missing_superclass UBERON:0005158 rdfs:subClassOf INFO missing_superclass UBERON:0005160 rdfs:subClassOf INFO missing_superclass UBERON:0005170 rdfs:subClassOf INFO missing_superclass UBERON:0005172 rdfs:subClassOf +INFO missing_superclass UBERON:0005173 rdfs:subClassOf INFO missing_superclass UBERON:0005174 rdfs:subClassOf INFO missing_superclass UBERON:0005175 rdfs:subClassOf INFO missing_superclass UBERON:0005177 rdfs:subClassOf INFO missing_superclass UBERON:0005179 rdfs:subClassOf +INFO missing_superclass UBERON:0005181 rdfs:subClassOf INFO missing_superclass UBERON:0005184 rdfs:subClassOf INFO missing_superclass UBERON:0005185 rdfs:subClassOf INFO missing_superclass UBERON:0005194 rdfs:subClassOf @@ -5771,10 +5827,15 @@ INFO missing_superclass UBERON:0005262 rdfs:subClassOf INFO missing_superclass UBERON:0005263 rdfs:subClassOf INFO missing_superclass UBERON:0005276 rdfs:subClassOf INFO missing_superclass UBERON:0005277 rdfs:subClassOf +INFO missing_superclass UBERON:0005286 rdfs:subClassOf +INFO missing_superclass UBERON:0005287 rdfs:subClassOf +INFO missing_superclass UBERON:0005288 rdfs:subClassOf +INFO missing_superclass UBERON:0005289 rdfs:subClassOf INFO missing_superclass UBERON:0005292 rdfs:subClassOf INFO missing_superclass UBERON:0005298 rdfs:subClassOf INFO missing_superclass UBERON:0005307 rdfs:subClassOf INFO missing_superclass UBERON:0005309 rdfs:subClassOf +INFO missing_superclass UBERON:0005310 rdfs:subClassOf INFO missing_superclass UBERON:0005316 rdfs:subClassOf INFO missing_superclass UBERON:0005317 rdfs:subClassOf INFO missing_superclass UBERON:0005320 rdfs:subClassOf @@ -6004,6 +6065,7 @@ INFO missing_superclass UBERON:0006677 rdfs:subClassOf INFO missing_superclass UBERON:0006686 rdfs:subClassOf INFO missing_superclass UBERON:0006694 rdfs:subClassOf INFO missing_superclass UBERON:0006726 rdfs:subClassOf +INFO missing_superclass UBERON:0006764 rdfs:subClassOf INFO missing_superclass UBERON:0006783 rdfs:subClassOf INFO missing_superclass UBERON:0006785 rdfs:subClassOf INFO missing_superclass UBERON:0006786 rdfs:subClassOf @@ -6017,6 +6079,7 @@ INFO missing_superclass UBERON:0006838 rdfs:subClassOf INFO missing_superclass UBERON:0006839 rdfs:subClassOf INFO missing_superclass UBERON:0006843 rdfs:subClassOf INFO missing_superclass UBERON:0006851 rdfs:subClassOf +INFO missing_superclass UBERON:0006853 rdfs:subClassOf INFO missing_superclass UBERON:0006862 rdfs:subClassOf INFO missing_superclass UBERON:0006872 rdfs:subClassOf INFO missing_superclass UBERON:0006876 rdfs:subClassOf @@ -6104,13 +6167,17 @@ INFO missing_superclass UBERON:0007386 rdfs:subClassOf INFO missing_superclass UBERON:0007413 rdfs:subClassOf INFO missing_superclass UBERON:0007414 rdfs:subClassOf INFO missing_superclass UBERON:0007415 rdfs:subClassOf +INFO missing_superclass UBERON:0007425 rdfs:subClassOf INFO missing_superclass UBERON:0007475 rdfs:subClassOf INFO missing_superclass UBERON:0007491 rdfs:subClassOf INFO missing_superclass UBERON:0007530 rdfs:subClassOf +INFO missing_superclass UBERON:0007592 rdfs:subClassOf INFO missing_superclass UBERON:0007601 rdfs:subClassOf +INFO missing_superclass UBERON:0007606 rdfs:subClassOf INFO missing_superclass UBERON:0007617 rdfs:subClassOf -INFO missing_superclass UBERON:0007625 rdfs:subClassOf +INFO missing_superclass UBERON:0007618 rdfs:subClassOf INFO missing_superclass UBERON:0007635 rdfs:subClassOf +INFO missing_superclass UBERON:0007642 rdfs:subClassOf INFO missing_superclass UBERON:0007644 rdfs:subClassOf INFO missing_superclass UBERON:0007652 rdfs:subClassOf INFO missing_superclass UBERON:0007692 rdfs:subClassOf @@ -6118,7 +6185,10 @@ INFO missing_superclass UBERON:0007719 rdfs:subClassOf INFO missing_superclass UBERON:0007771 rdfs:subClassOf INFO missing_superclass UBERON:0007772 rdfs:subClassOf INFO missing_superclass UBERON:0007773 rdfs:subClassOf +INFO missing_superclass UBERON:0007774 rdfs:subClassOf INFO missing_superclass UBERON:0007775 rdfs:subClassOf +INFO missing_superclass UBERON:0007777 rdfs:subClassOf +INFO missing_superclass UBERON:0007778 rdfs:subClassOf INFO missing_superclass UBERON:0007794 rdfs:subClassOf INFO missing_superclass UBERON:0007808 rdfs:subClassOf INFO missing_superclass UBERON:0007825 rdfs:subClassOf @@ -6127,9 +6197,15 @@ INFO missing_superclass UBERON:0007834 rdfs:subClassOf INFO missing_superclass UBERON:0007835 rdfs:subClassOf INFO missing_superclass UBERON:0007836 rdfs:subClassOf INFO missing_superclass UBERON:0007837 rdfs:subClassOf +INFO missing_superclass UBERON:0007914 rdfs:subClassOf INFO missing_superclass UBERON:0008115 rdfs:subClassOf +INFO missing_superclass UBERON:0008188 rdfs:subClassOf +INFO missing_superclass UBERON:0008192 rdfs:subClassOf INFO missing_superclass UBERON:0008193 rdfs:subClassOf +INFO missing_superclass UBERON:0008229 rdfs:subClassOf INFO missing_superclass UBERON:0008254 rdfs:subClassOf +INFO missing_superclass UBERON:0008255 rdfs:subClassOf +INFO missing_superclass UBERON:0008256 rdfs:subClassOf INFO missing_superclass UBERON:0008265 rdfs:subClassOf INFO missing_superclass UBERON:0008292 rdfs:subClassOf INFO missing_superclass UBERON:0008307 rdfs:subClassOf @@ -6138,6 +6214,8 @@ INFO missing_superclass UBERON:0008331 rdfs:subClassOf INFO missing_superclass UBERON:0008367 rdfs:subClassOf INFO missing_superclass UBERON:0008397 rdfs:subClassOf INFO missing_superclass UBERON:0008404 rdfs:subClassOf +INFO missing_superclass UBERON:0008408 rdfs:subClassOf +INFO missing_superclass UBERON:0008420 rdfs:subClassOf INFO missing_superclass UBERON:0008424 rdfs:subClassOf INFO missing_superclass UBERON:0008429 rdfs:subClassOf INFO missing_superclass UBERON:0008430 rdfs:subClassOf @@ -6173,9 +6251,14 @@ INFO missing_superclass UBERON:0008816 rdfs:subClassOf INFO missing_superclass UBERON:0008854 rdfs:subClassOf INFO missing_superclass UBERON:0008884 rdfs:subClassOf INFO missing_superclass UBERON:0008885 rdfs:subClassOf +INFO missing_superclass UBERON:0008887 rdfs:subClassOf INFO missing_superclass UBERON:0008896 rdfs:subClassOf +INFO missing_superclass UBERON:0008946 rdfs:subClassOf INFO missing_superclass UBERON:0008948 rdfs:subClassOf INFO missing_superclass UBERON:0008951 rdfs:subClassOf +INFO missing_superclass UBERON:0008952 rdfs:subClassOf +INFO missing_superclass UBERON:0008953 rdfs:subClassOf +INFO missing_superclass UBERON:0008987 rdfs:subClassOf INFO missing_superclass UBERON:0008993 rdfs:subClassOf INFO missing_superclass UBERON:0009000 rdfs:subClassOf INFO missing_superclass UBERON:0009020 rdfs:subClassOf @@ -6186,6 +6269,7 @@ INFO missing_superclass UBERON:0009032 rdfs:subClassOf INFO missing_superclass UBERON:0009042 rdfs:subClassOf INFO missing_superclass UBERON:0009075 rdfs:subClassOf INFO missing_superclass UBERON:0009114 rdfs:subClassOf +INFO missing_superclass UBERON:0009127 rdfs:subClassOf INFO missing_superclass UBERON:0009139 rdfs:subClassOf INFO missing_superclass UBERON:0009140 rdfs:subClassOf INFO missing_superclass UBERON:0009200 rdfs:subClassOf @@ -6210,7 +6294,16 @@ INFO missing_superclass UBERON:0009578 rdfs:subClassOf INFO missing_superclass UBERON:0009580 rdfs:subClassOf INFO missing_superclass UBERON:0009581 rdfs:subClassOf INFO missing_superclass UBERON:0009583 rdfs:subClassOf +INFO missing_superclass UBERON:0009584 rdfs:subClassOf INFO missing_superclass UBERON:0009585 rdfs:subClassOf +INFO missing_superclass UBERON:0009586 rdfs:subClassOf +INFO missing_superclass UBERON:0009587 rdfs:subClassOf +INFO missing_superclass UBERON:0009588 rdfs:subClassOf +INFO missing_superclass UBERON:0009589 rdfs:subClassOf +INFO missing_superclass UBERON:0009590 rdfs:subClassOf +INFO missing_superclass UBERON:0009591 rdfs:subClassOf +INFO missing_superclass UBERON:0009592 rdfs:subClassOf +INFO missing_superclass UBERON:0009593 rdfs:subClassOf INFO missing_superclass UBERON:0009596 rdfs:subClassOf INFO missing_superclass UBERON:0009597 rdfs:subClassOf INFO missing_superclass UBERON:0009598 rdfs:subClassOf @@ -6296,6 +6389,8 @@ INFO missing_superclass UBERON:0010313 rdfs:subClassOf INFO missing_superclass UBERON:0010314 rdfs:subClassOf INFO missing_superclass UBERON:0010328 rdfs:subClassOf INFO missing_superclass UBERON:0010330 rdfs:subClassOf +INFO missing_superclass UBERON:0010339 rdfs:subClassOf +INFO missing_superclass UBERON:0010341 rdfs:subClassOf INFO missing_superclass UBERON:0010359 rdfs:subClassOf INFO missing_superclass UBERON:0010360 rdfs:subClassOf INFO missing_superclass UBERON:0010366 rdfs:subClassOf @@ -6310,10 +6405,12 @@ INFO missing_superclass UBERON:0010413 rdfs:subClassOf INFO missing_superclass UBERON:0010414 rdfs:subClassOf INFO missing_superclass UBERON:0010418 rdfs:subClassOf INFO missing_superclass UBERON:0010419 rdfs:subClassOf +INFO missing_superclass UBERON:0010423 rdfs:subClassOf INFO missing_superclass UBERON:0010426 rdfs:subClassOf INFO missing_superclass UBERON:0010499 rdfs:subClassOf INFO missing_superclass UBERON:0010509 rdfs:subClassOf INFO missing_superclass UBERON:0010518 rdfs:subClassOf +INFO missing_superclass UBERON:0010519 rdfs:subClassOf INFO missing_superclass UBERON:0010520 rdfs:subClassOf INFO missing_superclass UBERON:0010521 rdfs:subClassOf INFO missing_superclass UBERON:0010527 rdfs:subClassOf @@ -6356,6 +6453,8 @@ INFO missing_superclass UBERON:0010855 rdfs:subClassOf INFO missing_superclass UBERON:0010862 rdfs:subClassOf INFO missing_superclass UBERON:0010863 rdfs:subClassOf INFO missing_superclass UBERON:0010864 rdfs:subClassOf +INFO missing_superclass UBERON:0010865 rdfs:subClassOf +INFO missing_superclass UBERON:0010866 rdfs:subClassOf INFO missing_superclass UBERON:0010867 rdfs:subClassOf INFO missing_superclass UBERON:0010868 rdfs:subClassOf INFO missing_superclass UBERON:0010879 rdfs:subClassOf @@ -6389,6 +6488,7 @@ INFO missing_superclass UBERON:0011245 rdfs:subClassOf INFO missing_superclass UBERON:0011247 rdfs:subClassOf INFO missing_superclass UBERON:0011264 rdfs:subClassOf INFO missing_superclass UBERON:0011265 rdfs:subClassOf +INFO missing_superclass UBERON:0011289 rdfs:subClassOf INFO missing_superclass UBERON:0011298 rdfs:subClassOf INFO missing_superclass UBERON:0011299 rdfs:subClassOf INFO missing_superclass UBERON:0011300 rdfs:subClassOf @@ -6409,6 +6509,7 @@ INFO missing_superclass UBERON:0011362 rdfs:subClassOf INFO missing_superclass UBERON:0011363 rdfs:subClassOf INFO missing_superclass UBERON:0011368 rdfs:subClassOf INFO missing_superclass UBERON:0011369 rdfs:subClassOf +INFO missing_superclass UBERON:0011371 rdfs:subClassOf INFO missing_superclass UBERON:0011379 rdfs:subClassOf INFO missing_superclass UBERON:0011380 rdfs:subClassOf INFO missing_superclass UBERON:0011531 rdfs:subClassOf @@ -6570,6 +6671,9 @@ INFO missing_superclass UBERON:0013212 rdfs:subClassOf INFO missing_superclass UBERON:0013228 rdfs:subClassOf INFO missing_superclass UBERON:0013229 rdfs:subClassOf INFO missing_superclass UBERON:0013231 rdfs:subClassOf +INFO missing_superclass UBERON:0013239 rdfs:subClassOf +INFO missing_superclass UBERON:0013240 rdfs:subClassOf +INFO missing_superclass UBERON:0013247 rdfs:subClassOf INFO missing_superclass UBERON:0013279 rdfs:subClassOf INFO missing_superclass UBERON:0013280 rdfs:subClassOf INFO missing_superclass UBERON:0013462 rdfs:subClassOf @@ -6682,6 +6786,9 @@ INFO missing_superclass UBERON:0014510 rdfs:subClassOf INFO missing_superclass UBERON:0014530 rdfs:subClassOf INFO missing_superclass UBERON:0014531 rdfs:subClassOf INFO missing_superclass UBERON:0014532 rdfs:subClassOf +INFO missing_superclass UBERON:0014541 rdfs:subClassOf +INFO missing_superclass UBERON:0014542 rdfs:subClassOf +INFO missing_superclass UBERON:0014543 rdfs:subClassOf INFO missing_superclass UBERON:0014547 rdfs:subClassOf INFO missing_superclass UBERON:0014551 rdfs:subClassOf INFO missing_superclass UBERON:0014552 rdfs:subClassOf @@ -6752,6 +6859,7 @@ INFO missing_superclass UBERON:0014792 rdfs:subClassOf INFO missing_superclass UBERON:0014793 rdfs:subClassOf INFO missing_superclass UBERON:0014851 rdfs:subClassOf INFO missing_superclass UBERON:0014852 rdfs:subClassOf +INFO missing_superclass UBERON:0014870 rdfs:subClassOf INFO missing_superclass UBERON:0014871 rdfs:subClassOf INFO missing_superclass UBERON:0014872 rdfs:subClassOf INFO missing_superclass UBERON:0014873 rdfs:subClassOf @@ -7227,6 +7335,7 @@ INFO missing_superclass UBERON:0034872 rdfs:subClassOf INFO missing_superclass UBERON:0034873 rdfs:subClassOf INFO missing_superclass UBERON:0034874 rdfs:subClassOf INFO missing_superclass UBERON:0034878 rdfs:subClassOf +INFO missing_superclass UBERON:0034898 rdfs:subClassOf INFO missing_superclass UBERON:0034901 rdfs:subClassOf INFO missing_superclass UBERON:0034902 rdfs:subClassOf INFO missing_superclass UBERON:0034903 rdfs:subClassOf @@ -7269,6 +7378,7 @@ INFO missing_superclass UBERON:0035074 rdfs:subClassOf INFO missing_superclass UBERON:0035076 rdfs:subClassOf INFO missing_superclass UBERON:0035078 rdfs:subClassOf INFO missing_superclass UBERON:0035081 rdfs:subClassOf +INFO missing_superclass UBERON:0035082 rdfs:subClassOf INFO missing_superclass UBERON:0035083 rdfs:subClassOf INFO missing_superclass UBERON:0035087 rdfs:subClassOf INFO missing_superclass UBERON:0035088 rdfs:subClassOf @@ -7415,11 +7525,22 @@ INFO missing_superclass UBERON:0036265 rdfs:subClassOf INFO missing_superclass UBERON:0036267 rdfs:subClassOf INFO missing_superclass UBERON:0036268 rdfs:subClassOf INFO missing_superclass UBERON:0036269 rdfs:subClassOf +INFO missing_superclass UBERON:0036285 rdfs:subClassOf +INFO missing_superclass UBERON:0036286 rdfs:subClassOf INFO missing_superclass UBERON:0036289 rdfs:subClassOf INFO missing_superclass UBERON:0036290 rdfs:subClassOf INFO missing_superclass UBERON:0036291 rdfs:subClassOf INFO missing_superclass UBERON:0036294 rdfs:subClassOf INFO missing_superclass UBERON:0036300 rdfs:subClassOf +INFO missing_superclass UBERON:0036343 rdfs:subClassOf +INFO missing_superclass UBERON:0036362 rdfs:subClassOf +INFO missing_superclass UBERON:0036441 rdfs:subClassOf +INFO missing_superclass UBERON:0036521 rdfs:subClassOf +INFO missing_superclass UBERON:0036523 rdfs:subClassOf +INFO missing_superclass UBERON:0036925 rdfs:subClassOf +INFO missing_superclass UBERON:0036990 rdfs:subClassOf +INFO missing_superclass UBERON:0037191 rdfs:subClassOf +INFO missing_superclass UBERON:0037237 rdfs:subClassOf INFO missing_superclass UBERON:0037458 rdfs:subClassOf INFO missing_superclass UBERON:0037459 rdfs:subClassOf INFO missing_superclass UBERON:0037722 rdfs:subClassOf @@ -7434,7 +7555,10 @@ INFO missing_superclass UBERON:0037795 rdfs:subClassOf INFO missing_superclass UBERON:0037796 rdfs:subClassOf INFO missing_superclass UBERON:0037797 rdfs:subClassOf INFO missing_superclass UBERON:0037798 rdfs:subClassOf +INFO missing_superclass UBERON:0039175 rdfs:subClassOf +INFO missing_superclass UBERON:0039176 rdfs:subClassOf INFO missing_superclass UBERON:0039355 rdfs:subClassOf +INFO missing_superclass UBERON:0039857 rdfs:subClassOf INFO missing_superclass UBERON:1000006 rdfs:subClassOf INFO missing_superclass UBERON:1000015 rdfs:subClassOf INFO missing_superclass UBERON:1000020 rdfs:subClassOf @@ -7443,6 +7567,8 @@ INFO missing_superclass UBERON:1000024 rdfs:subClassOf INFO missing_superclass UBERON:1100000 rdfs:subClassOf INFO missing_superclass UBERON:1500007 rdfs:subClassOf INFO missing_superclass UBERON:1700006 rdfs:subClassOf +INFO missing_superclass UBERON:2000052 rdfs:subClassOf +INFO missing_superclass UBERON:2000078 rdfs:subClassOf INFO missing_superclass UBERON:2000202 rdfs:subClassOf INFO missing_superclass UBERON:2000238 rdfs:subClassOf INFO missing_superclass UBERON:2000315 rdfs:subClassOf @@ -7458,8 +7584,12 @@ INFO missing_superclass UBERON:2001269 rdfs:subClassOf INFO missing_superclass UBERON:2001316 rdfs:subClassOf INFO missing_superclass UBERON:2001388 rdfs:subClassOf INFO missing_superclass UBERON:2001389 rdfs:subClassOf +INFO missing_superclass UBERON:2001391 rdfs:subClassOf INFO missing_superclass UBERON:2001457 rdfs:subClassOf INFO missing_superclass UBERON:2001537 rdfs:subClassOf +INFO missing_superclass UBERON:2001608 rdfs:subClassOf +INFO missing_superclass UBERON:2001633 rdfs:subClassOf +INFO missing_superclass UBERON:2001649 rdfs:subClassOf INFO missing_superclass UBERON:2001651 rdfs:subClassOf INFO missing_superclass UBERON:2001653 rdfs:subClassOf INFO missing_superclass UBERON:2001655 rdfs:subClassOf @@ -7468,14 +7598,58 @@ INFO missing_superclass UBERON:2001659 rdfs:subClassOf INFO missing_superclass UBERON:2001660 rdfs:subClassOf INFO missing_superclass UBERON:2001663 rdfs:subClassOf INFO missing_superclass UBERON:2001665 rdfs:subClassOf +INFO missing_superclass UBERON:2001676 rdfs:subClassOf +INFO missing_superclass UBERON:2001677 rdfs:subClassOf +INFO missing_superclass UBERON:2001678 rdfs:subClassOf +INFO missing_superclass UBERON:2001679 rdfs:subClassOf +INFO missing_superclass UBERON:2001680 rdfs:subClassOf +INFO missing_superclass UBERON:2001710 rdfs:subClassOf +INFO missing_superclass UBERON:2001711 rdfs:subClassOf +INFO missing_superclass UBERON:2001749 rdfs:subClassOf +INFO missing_superclass UBERON:2001784 rdfs:subClassOf +INFO missing_superclass UBERON:2001794 rdfs:subClassOf +INFO missing_superclass UBERON:2001801 rdfs:subClassOf +INFO missing_superclass UBERON:2001803 rdfs:subClassOf +INFO missing_superclass UBERON:2001831 rdfs:subClassOf +INFO missing_superclass UBERON:2001832 rdfs:subClassOf +INFO missing_superclass UBERON:2001842 rdfs:subClassOf +INFO missing_superclass UBERON:2001843 rdfs:subClassOf +INFO missing_superclass UBERON:2001844 rdfs:subClassOf +INFO missing_superclass UBERON:2001845 rdfs:subClassOf +INFO missing_superclass UBERON:2001846 rdfs:subClassOf +INFO missing_superclass UBERON:2001847 rdfs:subClassOf +INFO missing_superclass UBERON:2001848 rdfs:subClassOf +INFO missing_superclass UBERON:2001861 rdfs:subClassOf INFO missing_superclass UBERON:2001869 rdfs:subClassOf INFO missing_superclass UBERON:2001870 rdfs:subClassOf INFO missing_superclass UBERON:2001889 rdfs:subClassOf +INFO missing_superclass UBERON:2001939 rdfs:subClassOf +INFO missing_superclass UBERON:2001940 rdfs:subClassOf +INFO missing_superclass UBERON:2001941 rdfs:subClassOf +INFO missing_superclass UBERON:2001942 rdfs:subClassOf +INFO missing_superclass UBERON:2001947 rdfs:subClassOf +INFO missing_superclass UBERON:2001950 rdfs:subClassOf +INFO missing_superclass UBERON:2001979 rdfs:subClassOf INFO missing_superclass UBERON:2001994 rdfs:subClassOf +INFO missing_superclass UBERON:2002032 rdfs:subClassOf +INFO missing_superclass UBERON:2002033 rdfs:subClassOf +INFO missing_superclass UBERON:2002034 rdfs:subClassOf +INFO missing_superclass UBERON:2002038 rdfs:subClassOf +INFO missing_superclass UBERON:2002054 rdfs:subClassOf +INFO missing_superclass UBERON:2002055 rdfs:subClassOf +INFO missing_superclass UBERON:2002059 rdfs:subClassOf INFO missing_superclass UBERON:2002063 rdfs:subClassOf INFO missing_superclass UBERON:2002099 rdfs:subClassOf INFO missing_superclass UBERON:2002101 rdfs:subClassOf +INFO missing_superclass UBERON:2002217 rdfs:subClassOf +INFO missing_superclass UBERON:2002260 rdfs:subClassOf +INFO missing_superclass UBERON:2002282 rdfs:subClassOf INFO missing_superclass UBERON:2005113 rdfs:subClassOf +INFO missing_superclass UBERON:2005264 rdfs:subClassOf +INFO missing_superclass UBERON:2005265 rdfs:subClassOf +INFO missing_superclass UBERON:2005268 rdfs:subClassOf +INFO missing_superclass UBERON:2005278 rdfs:subClassOf +INFO missing_superclass UBERON:2105225 rdfs:subClassOf INFO missing_superclass UBERON:2105372 rdfs:subClassOf INFO missing_superclass UBERON:2105373 rdfs:subClassOf INFO missing_superclass UBERON:2105374 rdfs:subClassOf @@ -7539,8 +7713,16 @@ INFO missing_superclass UBERON:3000982 rdfs:subClassOf INFO missing_superclass UBERON:3010200 rdfs:subClassOf INFO missing_superclass UBERON:4000013 rdfs:subClassOf INFO missing_superclass UBERON:4000118 rdfs:subClassOf +INFO missing_superclass UBERON:4000162 rdfs:subClassOf +INFO missing_superclass UBERON:4100000 rdfs:subClassOf INFO missing_superclass UBERON:4100009 rdfs:subClassOf INFO missing_superclass UBERON:4200046 rdfs:subClassOf +INFO missing_superclass UBERON:4200153 rdfs:subClassOf +INFO missing_superclass UBERON:4200154 rdfs:subClassOf +INFO missing_superclass UBERON:4200155 rdfs:subClassOf +INFO missing_superclass UBERON:4200156 rdfs:subClassOf +INFO missing_superclass UBERON:4200157 rdfs:subClassOf +INFO missing_superclass UBERON:4200158 rdfs:subClassOf INFO missing_superclass UBERON:4200188 rdfs:subClassOf INFO missing_superclass UBERON:4200189 rdfs:subClassOf INFO missing_superclass UBERON:4200230 rdfs:subClassOf @@ -7565,11 +7747,18 @@ INFO missing_superclass UBERON:4300268 rdfs:subClassOf INFO missing_superclass UBERON:4400000 rdfs:subClassOf INFO missing_superclass UBERON:6000004 rdfs:subClassOf INFO missing_superclass UBERON:6000006 rdfs:subClassOf +INFO missing_superclass UBERON:6000016 rdfs:subClassOf +INFO missing_superclass UBERON:6000021 rdfs:subClassOf +INFO missing_superclass UBERON:6000137 rdfs:subClassOf INFO missing_superclass UBERON:6000157 rdfs:subClassOf +INFO missing_superclass UBERON:6001728 rdfs:subClassOf INFO missing_superclass UBERON:6001730 rdfs:subClassOf INFO missing_superclass UBERON:6001732 rdfs:subClassOf INFO missing_superclass UBERON:6002639 rdfs:subClassOf +INFO missing_superclass UBERON:6003005 rdfs:subClassOf +INFO missing_superclass UBERON:6003259 rdfs:subClassOf INFO missing_superclass UBERON:6004663 rdfs:subClassOf +INFO missing_superclass UBERON:6004668 rdfs:subClassOf INFO missing_superclass UBERON:6007149 rdfs:subClassOf INFO missing_superclass UBERON:7500046 rdfs:subClassOf INFO missing_superclass UBERON:7500047 rdfs:subClassOf @@ -7593,6 +7782,9 @@ INFO missing_superclass UBERON:7770005 rdfs:subClassOf INFO missing_superclass UBERON:7770006 rdfs:subClassOf INFO missing_superclass UBERON:7770007 rdfs:subClassOf INFO missing_superclass UBERON:7770008 rdfs:subClassOf +INFO missing_superclass UBERON:8000006 rdfs:subClassOf +INFO missing_superclass UBERON:8000007 rdfs:subClassOf +INFO missing_superclass UBERON:8300000 rdfs:subClassOf INFO missing_superclass UBERON:8300001 rdfs:subClassOf INFO missing_superclass UBERON:8300002 rdfs:subClassOf INFO missing_superclass UBERON:8300003 rdfs:subClassOf @@ -7735,6 +7927,7 @@ INFO missing_superclass UBERON:8490048 rdfs:subClassOf INFO missing_superclass UBERON:8490049 rdfs:subClassOf INFO missing_superclass UBERON:8490050 rdfs:subClassOf INFO missing_superclass UBERON:8490051 rdfs:subClassOf +INFO missing_superclass UBERON:8500005 rdfs:subClassOf INFO missing_superclass UBERON:8600001 rdfs:subClassOf INFO missing_superclass UBERON:8600002 rdfs:subClassOf INFO missing_superclass UBERON:8600003 rdfs:subClassOf @@ -7761,3 +7954,4 @@ INFO missing_superclass UBERON:8600139 rdfs:subClassOf INFO missing_superclass UBERON:8600140 rdfs:subClassOf INFO missing_superclass UBERON:8600148 rdfs:subClassOf INFO missing_superclass UBERON:8850000 rdfs:subClassOf +INFO missing_superclass UBERON:8850001 rdfs:subClassOf diff --git a/subsets/life-stages-composite.obo b/subsets/life-stages-composite.obo index ac896c97a..f9628ae11 100755 --- a/subsets/life-stages-composite.obo +++ b/subsets/life-stages-composite.obo @@ -1,12 +1,12 @@ format-version: 1.2 -data-version: uberon/releases/2025-12-04/subsets/life-stages-composite.owl +data-version: uberon/releases/2026-04-01/subsets/life-stages-composite.owl idspace: foaf http://xmlns.com/foaf/0.1/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# idspace: pav http://purl.org/pav/ idspace: sssom https://w3id.org/sssom/ idspace: terms http://purl.org/dc/terms/ ontology: uberon/subsets/life-stages-composite -property_value: owl:versionInfo "2025-12-04" xsd:string +property_value: owl:versionInfo "2026-04-01" xsd:string [Term] id: BFO:0000001 @@ -26,6 +26,19 @@ property_value: editor_note "BFO 2 Reference: every occurrent that is not a temp property_value: editor_note "BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players." xsd:string property_value: IAO:0000589 "processual entity (BFO)" xsd:string +[Term] +id: BFO:0000015 +name: process +is_a: BFO:0000003 ! occurrent +property_value: editor_note "BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)" xsd:string +property_value: example_of_usage "a process of cell-division, \\ a beating of the heart" xsd:string +property_value: example_of_usage "a process of meiosis" xsd:string +property_value: example_of_usage "a process of sleeping" xsd:string +property_value: example_of_usage "the course of a disease" xsd:string +property_value: example_of_usage "the flight of a bird" xsd:string +property_value: example_of_usage "the life of an organism" xsd:string +property_value: example_of_usage "your process of aging." xsd:string + [Term] id: BtauDv:0000007 name: first trimester of gestation (cow) @@ -10692,20 +10705,6 @@ is_a: UBERON:0000105 ! life cycle stage relationship: immediately_preceded_by SscrDv:0000082 ! bud limb stage (pig) relationship: part_of UBERON:0000111 ! organogenesis stage -[Term] -id: UBERON:0000000 -name: processual entity -def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] -comment: This term is being aligned with COB -subset: common_anatomy -subset: upper_level -xref: BFO:0000003 -is_a: BFO:0000003 ! occurrent -relationship: present_in_taxon NCBITaxon:33090 -relationship: present_in_taxon NCBITaxon:33208 -relationship: present_in_taxon NCBITaxon:4751 -property_value: seeAlso "https://github.com/OBOFoundry/COB/issues/51" xsd:anyURI - [Term] id: UBERON:0000066 name: fully formed stage @@ -10945,7 +10944,7 @@ xref: WBls:0000002 xref: XAO:1000000 xref: ZFS:0000000 xref: ZFS:0100000 -is_a: UBERON:0000000 ! processual entity +is_a: BFO:0000015 ! process relationship: present_in_taxon NCBITaxon:33090 relationship: present_in_taxon NCBITaxon:33208 relationship: present_in_taxon NCBITaxon:4751 diff --git a/uberon-base.owl b/uberon-base.owl index ac73e2f9f..e1a384963 100755 --- a/uberon-base.owl +++ b/uberon-base.owl @@ -16,9 +16,11 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + + + @@ -176,7 +178,7 @@ ZFA part_of NCBITaxon:7954 ZFS part_of NCBITaxon:7954 Aurelie Comte, Bill Bug, Catherine Leroy, Duncan Davidson and Trish Whetzel are also contributors. However their ORCIDs were not found. - 2025-12-04 + 2026-04-01 http://uberon.org @@ -990,6 +992,15 @@ + + + + Classes tagged with this subset property were added on request from HuBMAP to support the HuBMAP Human Reference Atlas (HRA). + + + + + @@ -2716,6 +2727,7 @@ + subdivision_of placeholder relation. X = 'subdivision of A' and subdivision_of some B means that X is the mereological sum of A and B subdivision of @@ -2787,6 +2799,12 @@ + + + + + + @@ -2799,6 +2817,12 @@ + + + + + + @@ -4401,6 +4425,18 @@ + + + + + + + + + + + + @@ -5469,6 +5505,12 @@ + + + + + + @@ -5487,12 +5529,6 @@ - - - - - - @@ -5715,6 +5751,14 @@ + + + + + + + + @@ -7008,28 +7052,42 @@ - - An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. - - - - BFO:0000003 + OBSOLETE: An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. UBERON:0000000 - - - This term is being aligned with COB - processual entity + "This term has been deprecated in favour of BFO:0000015 ('process' in COB)" + obsolete processual entity https://github.com/OBOFoundry/COB/issues/51 + true - An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. + OBSOLETE: An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. span:ProcessualEntity + + + + + + Anatomical structure that is part of a multicellular organism and is at the gross anatomical level, e.g. above the level of a cell. Included are portions of organism substances such as blood, multi-cell-part structures such as axon tracts, acellular anatomical structures such as hair, and organism subdivisions such as head. Excluded is the whole organism and more granular parts of the organism, such as atoms, molecules, macromolecular complexes and cells. + + CARO:0001008 + UBERON:0000001 + gross anatomical part + + + + + Anatomical structure that is part of a multicellular organism and is at the gross anatomical level, e.g. above the level of a cell. Included are portions of organism substances such as blood, multi-cell-part structures such as axon tracts, acellular anatomical structures such as hair, and organism subdivisions such as head. Excluded is the whole organism and more granular parts of the organism, such as atoms, molecules, macromolecular complexes and cells. + CARO:0001008 + + + + @@ -7213,7 +7271,7 @@ - + @@ -7244,14 +7302,14 @@ naris - + - + ZFA @@ -7293,8 +7351,8 @@ - - + + @@ -7359,25 +7417,25 @@ nose http://upload.wikimedia.org/wikipedia/commons/d/d0/Canine-nose.jpg - + - + - + FMA ZFA-def - + ZFA @@ -7511,9 +7569,9 @@ - - - + + + @@ -7556,15 +7614,15 @@ islet of Langerhans http://upload.wikimedia.org/wikipedia/commons/9/99/Gray1105.png - + - + - + @@ -7622,19 +7680,19 @@ - + PMID:16417468 - + PMID:16417468 - + PMID:16417468 @@ -7648,8 +7706,8 @@ - - + + @@ -7674,7 +7732,7 @@ - + The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [GO]. An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin [ZFIN]. An endocrine gland derived from infundibulum of the floor of the diencephalon and an ectodermal dorsal protrusion from the buccal cavity which controls the secretion of many hormones influencing the function of various organs of the body.[AAO] An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin.[TAO] @@ -7726,15 +7784,15 @@ pituitary gland http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png - + - + - + @@ -7749,19 +7807,19 @@ - + ZFA - + ZFA - + https://orcid.org/0000-0003-3308-6245 @@ -8104,7 +8162,7 @@ - + @@ -8149,7 +8207,7 @@ parasympathetic nervous system http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png - + @@ -8162,7 +8220,7 @@ - + FMA MA WP @@ -8294,7 +8352,7 @@ - + @@ -8339,7 +8397,7 @@ sympathetic nervous system http://upload.wikimedia.org/wikipedia/commons/7/77/Gray838.png - + @@ -8352,7 +8410,7 @@ - + FMA MA ZFA-modified-from-isa @@ -8547,7 +8605,7 @@ - + @@ -8560,9 +8618,9 @@ - - - + + + @@ -8609,19 +8667,19 @@ endocrine pancreas - + - + - + - + @@ -8634,7 +8692,7 @@ - + AAO FMA XAO @@ -8642,19 +8700,19 @@ - + GO - + GO - + GO @@ -8967,7 +9025,7 @@ - + @@ -9007,14 +9065,14 @@ camera-type eye - + - + definitional @@ -9575,7 +9633,7 @@ Major subdivision of an organism that protrudes from the body[DOS, CARO]. - CARO:DOS + https://orcid.org/0000-0002-7073-9172 @@ -9861,7 +9919,7 @@ - + A lamina propria that is part of a respiratory airway. EMAPA:35877 FMA:265157 @@ -9883,14 +9941,14 @@ UBERON:0000031 lamina propria of trachea - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -10631,8 +10689,8 @@ - - + + A hemopoietic organ found in elasmobranchs. Along with the spleen and special tissue around the gonads, this structure produces red blood cells and it is nestled along the top and bottom of the esophagus. Found in elasmobranchs (sharks and rays) but with some exceptions. @@ -10642,24 +10700,24 @@ Phenotype notes: Leydig's organ can be quite large - a 1.6-kilogram (3.5-pound) one was reported from a 1.8-metre (6-foot) long Bluntnose Sixgill Shark (Hexanchus griseus). Structure notes: divided into dorsal and ventral patches, gradation varies between species. Lacks erythroblasts and fat cells[Honma 1983] Leydig's organ - + - + - + Wikipedia - + Honma1983 @@ -10858,8 +10916,8 @@ - - + + @@ -10903,11 +10961,11 @@ tendon http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg - + - + @@ -10920,13 +10978,13 @@ - + OG - + AEO @@ -11004,7 +11062,7 @@ - + @@ -11071,7 +11129,7 @@ https://github.com/obophenotype/uberon/issues/2644 http://upload.wikimedia.org/wikipedia/commons/7/71/DRG_Chicken_e7.jpg - + @@ -11084,7 +11142,7 @@ - + DOI:10.1101/gr.157586.113 ZFA https://github.com/obophenotype/uberon/wiki/The-neural-crest @@ -11208,8 +11266,8 @@ - - + + A biological tissue mass, most commonly a mass of nerve cell bodies. TODO - check vert vs invert. Other species: Any of a number of aggregations of neurons, glial cells and their processes, surrounded by a glial cell and connective tissue sheath (plural: ganglia). // Subdivision of neural tree (organ) which primarily consists of cell bodies of neurons located outside the neuraxis (brain and spinal cord); together with a nucleus and its associated nerve, it constitutes a neural tree (organ). Examples: spinal ganglion, trigeminal ganglion, superior cervical ganglion, celiac ganglion, inferior hypogastric (pelvic) ganglion. // a cluster of nerve cells and associated glial cells (nuclear location) // Portion of tissue that contains cell bodies of neurons and is located outside the central nervous system. @@ -11261,11 +11319,11 @@ ganglion - + - + @@ -11278,13 +11336,13 @@ - + EHDAA2 - + Bgee:AN @@ -11453,7 +11511,7 @@ - + Simple eye that has two or more lenses. Some marine organisms bear more than one lens; for instance the copeopod Pontella has three. The outer has a parabolic surface, countering the effects of spherical aberration while allowing a sharp image to be formed. Copilla's eyes have two lenses, which move in and out like a telescope. Wikipedia:Eye#Multiple_lenses @@ -11462,14 +11520,14 @@ simple eye with multiple lenses - + - + 2 @@ -11540,7 +11598,7 @@ - + @@ -11589,14 +11647,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + NIFSTD @@ -11865,7 +11923,7 @@ - + @@ -11924,14 +11982,14 @@ ureter https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg - + - + GO @@ -12003,8 +12061,8 @@ - - + + @@ -12053,25 +12111,25 @@ urethra https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png - + - + - + pelvic part of UG sinus gives rise to prostatic and membranous parts of urethra Wikipedia - + Wikipedia @@ -12590,7 +12648,7 @@ - + @@ -12610,14 +12668,14 @@ respiratory tract - + - + NCBIBook:NBK10107 @@ -12632,7 +12690,6 @@ - @@ -12831,7 +12888,6 @@ - @@ -13042,7 +13098,6 @@ - @@ -13374,7 +13429,6 @@ - @@ -13382,7 +13436,7 @@ - + @@ -13414,14 +13468,14 @@ pupal stage https://github.com/obophenotype/uberon/issues/562 - + - + may be better to model pupal development as including the pre-pupal stage @@ -13470,7 +13524,6 @@ - @@ -13619,7 +13672,7 @@ - + @@ -13670,14 +13723,14 @@ http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg - + - + FMA MA @@ -13821,7 +13874,7 @@ - + The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. merge with non-neural. In vertebrates, the ectoderm has three parts: external ectoderm (also known as surface ectoderm), the neurectoderm (neural crest, and neural tube) @@ -13846,7 +13899,7 @@ external ectoderm http://upload.wikimedia.org/wikipedia/commons/1/1d/Ectoderm.png - + @@ -13859,7 +13912,7 @@ - + EHDAA2 @@ -15389,7 +15442,6 @@ - @@ -15762,8 +15814,7 @@ - - + @@ -15960,7 +16011,7 @@ - + @@ -16166,7 +16217,6 @@ - @@ -16320,7 +16370,6 @@ - @@ -16425,7 +16474,6 @@ - @@ -16524,7 +16572,6 @@ - @@ -16679,7 +16726,6 @@ - @@ -16777,7 +16823,6 @@ - @@ -16877,7 +16922,6 @@ - @@ -17080,7 +17124,6 @@ - @@ -17858,8 +17901,8 @@ A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses. CARO:0001001 - FBC:DOS FBbt:00005099 + https://orcid.org/0000-0002-7073-9172 @@ -19572,12 +19615,6 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - - - - - the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts - @@ -19896,12 +19933,6 @@ - - - - - - @@ -19966,7 +19997,7 @@ - + @@ -19985,20 +20016,6 @@ - - - - 1 - - - - - - - 1 - - - The pair of anatomical structures comprised of a left lung and right lung. FMA:68877 @@ -20011,14 +20028,14 @@ pair of lungs - + - + FMA-abduced @@ -20391,15 +20408,15 @@ - + - - + + A fluid that is composed of blood plasma and erythrocytes. This class excludes blood analogues, such as the insect analog of blood. See UBERON:0000179 haemolymphatic fluid. @@ -20442,34 +20459,34 @@ blood - + - + - + - + CL:tm - + https://github.com/obophenotype/uberon/issues/1330 - + Bgee:AN @@ -20660,7 +20677,7 @@ - + The narrow part of the shaft of the radius just below the head. FMA:23479 SCTID:181942005 @@ -20671,14 +20688,14 @@ neck of radius - + - + FMA @@ -21006,7 +21023,7 @@ - + Ventral part (base region) of the telencephalon. BTO term refers specifically to the avian structure @@ -21025,14 +21042,14 @@ ventral part of telencephalon - + - + separated by cell-free region @@ -21204,7 +21221,7 @@ - + @@ -21237,7 +21254,7 @@ http://upload.wikimedia.org/wikipedia/commons/9/97/Gray136.png https://upload.wikimedia.org/wikipedia/commons/5/5b/Frontal_bone.png - + @@ -21250,7 +21267,7 @@ - + cjm @@ -21305,7 +21322,7 @@ - + @@ -21338,7 +21355,7 @@ tetrapod parietal bone http://upload.wikimedia.org/wikipedia/commons/2/21/Gray132.png - + @@ -21351,7 +21368,7 @@ - + PMID:11523816 @@ -21523,7 +21540,7 @@ - + A specialized claw or nail on the foot of certain primates, used for personal grooming. 2009-05-19T08:19:58Z @@ -21531,14 +21548,14 @@ UBERON:0000212 toilet claw - + - + Wikipedia @@ -21638,7 +21655,7 @@ - + @@ -21670,14 +21687,14 @@ atlanto-occipital joint http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray304.png - + - + FMA-abduced-lr @@ -21769,9 +21786,9 @@ + + - - A closed space between the embryo and the amnion which contains the amniotic fluid and is formed by the fusion of the parts of the anterior and posterior amniotic folds. The closed sac between the embryo and the amnion, containing the amniotic fluid. [Free_Online_Medical_Dictionary] BTO:0000025 @@ -21790,34 +21807,34 @@ amniotic cavity http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png - + - + - + - + EHDAA2 - + cjm - + cjm @@ -21857,8 +21874,8 @@ - - + + An adductor muscle that attaches to the hip and femur. In humans, it is a part of the adductor group of the thigh, that as the name suggests adducts the thigh. The adductor longus muscle forms the medial wall of the femoral triangle[WP, generalized]. Originates on the iliac portion of the ventral iliac rim and inserts on the lateral surface of the M. adductor magnus.[AAO] @@ -21878,11 +21895,11 @@ adductor longus http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + @@ -21895,14 +21912,14 @@ - + pubic body just below the pubic crest dbpedia - + linea aspera dbpedia @@ -22035,15 +22052,15 @@ - + - - + + The thin innermost layer of the extraembryonic membranes that contains the amniotic fluid; the membrane forms a closed sac in which the embryo and later, the fetus, is suspended and protected. A thin but tough extraembryonic membrane of reptiles, birds and mammals that lines the chorion and contains the fEtus and the amniotic fluid around it. [Biology_Online][VHOG] @@ -22071,34 +22088,34 @@ http://upload.wikimedia.org/wikipedia/commons/e/e7/Gray14.png https://cdn.humanatlas.io/digital-objects/ref-organ/placenta-full-term-female/v1.1/assets/3d-vh-f-placenta-full-term.glb - + - + - + - + ISBN:0073040584 - + ISBN:0073040584-table5.4 - + ISBN:0073040584-table5.4 @@ -22369,8 +22386,8 @@ - - + + @@ -22389,24 +22406,24 @@ UBERON:0000312 inner cambium layer of periosteum - + - + - + FMA - + Wikipedia @@ -22725,7 +22742,7 @@ - + @@ -22760,14 +22777,14 @@ http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray769-en.svg http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray769.png - + - + ISBN:0471888893 @@ -23257,7 +23274,7 @@ - + The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin. BTO:0000503 EMAPA:27181 @@ -23267,7 +23284,7 @@ gastric gland - + @@ -23280,7 +23297,7 @@ - + ISBN:0073040584 @@ -24210,7 +24227,7 @@ - + The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the orbit and its contents, the nasal cavity and the skin of the nose and forehead. Sensory medial ramus of the trigeminal nerve.[AAO] @@ -24261,14 +24278,14 @@ Terminology notes. This nerve is known by a ridiculous number of names[http://palaeos.com/vertebrates/glossary/glossaryPo.html] ophthalmic nerve - + - + may be a distinct nerve in teleosts multiple @@ -24525,14 +24542,14 @@ - + - + A fibrous membrane, which, in the neck, represents the supraspinal ligaments of the upper vertebrae. @@ -24553,24 +24570,24 @@ UBERON:0000351 nuchal ligament - + - + - + BTO - + C7 in humans @@ -25487,8 +25504,8 @@ - - + + The adductor brevis is a muscle in the thigh situated immediately behind the pectineus and adductor longus. It is somewhat triangular in form, and arises by a narrow origin from the outer surfaces of the superior and inferior rami of the pubis, between the gracilis and obturator externus. Its fibers, passing backward, lateralward, and downward, are inserted, by an aponeurosis, into the line leading from the lesser trochanter to the linea aspera and into the upper part of the linea aspera, immediately behind the pectineus and upper part of the adductor longus.[WP]. BTO:0001288 @@ -25503,11 +25520,11 @@ adductor brevis http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + @@ -25520,14 +25537,14 @@ - + anterior surface of the inferior ramus and body of the pubis dbpedia - + the lesser trochanter and linea aspera of the femur dbpedia @@ -25550,7 +25567,7 @@ - + The corpus striatum (striated body) is a compound structure consisting of the caudate nucleus and the lentiform nucleus, which consists of the putamen and the globus pallidus[WP]. Thus, certain telencephalic characters - such as the presence of a pallium divided into lateral, dorsal, and medial formations and a subpallium divided into striatum and septum - appear to characterize all vertebrates. They are primitive characters and are homologous among all vertebrates.[well established][VHOG] The term has been used in a few different ways: * It is a pair of nuclear masses which form the basal ganglia, along with the subthalamic nucleus and the substantia nigra. * It may also refer to both the basal ganglia and internal capsule collectively.[2] @@ -25579,14 +25596,14 @@ corpus striatum http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray656.png - + - + MA @@ -25631,9 +25648,9 @@ - - - + + + An adductor muscle that attaches to the pelvic bone and the femur. In humans, the adductor magnus is a large triangular muscle, situated on the medial side of the thigh. The portion which arises from the ischiopubic ramus (a small part of the inferior ramus of the pubis, and the inferior ramus of the ischium) is called the 'adductor magnesius portion', and the portion arising from the tuberosity of the ischium is called the 'hamstring portion'. The hamstring portion is not considered part of the hamstring group of muscles, but it is adjacent to it.[WP,generalized]. Origin by two heads that are separated by a ventral tendon of the M. semitendinosus. One head originates from the ventral border of the pubic portion of the pelvic rim. The other head originates from the ischiatic border of the pelvic rim. The ventral head fuses with accessory head from the M. semitendinosus and inserts along the ventro-medial border of the femur. The dorsal belly merges with the ventral and accessory heads and inserts along the medial surface of the femur.[AAO] @@ -25652,15 +25669,15 @@ adductor magnus http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + - + @@ -25673,21 +25690,21 @@ - + posterior branch of obturator nerve and sciatic nerve dbpedia - + tuberosity of the ischium dbpedia - + dbpedia @@ -25725,7 +25742,7 @@ - + @@ -25751,7 +25768,7 @@ syncytiotrophoblast http://upload.wikimedia.org/wikipedia/commons/d/df/Gray36.png - + @@ -25764,7 +25781,7 @@ - + EMAPA @@ -25807,8 +25824,8 @@ - - + + A muscle on the upper surface of the foot that helps extend digits 2 through 4. BTO:0001337 @@ -25824,25 +25841,25 @@ http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1241.png http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray441.png - + - + - + dorsal surface of calcaneus dbpedia - + proximal dorsal region of middle phalanges 2 3 and 4 dbpedia @@ -26119,7 +26136,7 @@ - + @@ -26171,14 +26188,14 @@ hindlimb stylopod http://upload.wikimedia.org/wikipedia/commons/4/4b/Gray1238.png - + - + MA @@ -26491,7 +26508,7 @@ - + @@ -26524,20 +26541,14 @@ tongue muscle http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray1019.png - + - - FEED:rd - - - - - + FEED:rd ISBN:1607950324 @@ -26800,14 +26811,14 @@ - + - + @@ -26840,24 +26851,24 @@ urinary bladder detrusor smooth muscle https://upload.wikimedia.org/wikipedia/commons/5/57/Illu_bladder.jpg - + - + - + FMA - + posterior surface of the body of the pubis dbpedia @@ -27234,7 +27245,7 @@ - + A part of the pharynx that consists of a flap of elastic cartilage tissue plus a mucous membrane covering, attached to the entrance of the larynx. The epiglottis is found at the root of the tongue and folds back over the entrance to the larynx during swallowing, preventing inhalation of food or drink[MP,modified]. epiglottal @@ -27253,14 +27264,14 @@ epiglottis http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray958.png - + - + EHDAA2 @@ -27491,10 +27502,10 @@ + + + - - - The longissimus is the muscle lateral to the semispinalis. It is the longest subdivision of the sacrospinalis that extends forward into the transverse processes of the posterior cervical vertebrae. [WP,unvetted]. BTO:0001648 EMAPA:37648 @@ -27508,19 +27519,19 @@ longissimus muscle http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png - + - + - + - + @@ -27533,25 +27544,25 @@ - + BTO - + dbpedia - + dbpedia - + dbpedia @@ -27610,7 +27621,7 @@ - + @@ -27646,14 +27657,14 @@ cochlear ganglion http://upload.wikimedia.org/wikipedia/commons/b/b1/Gray903.png - + - + cell bodies BTO-modified Wikipedia @@ -28103,7 +28114,7 @@ - + An epithelium that is part of a jejunum. BTO:0001743 @@ -28117,14 +28128,14 @@ jejunal epithelium - + - + FMA @@ -28268,7 +28279,7 @@ - + @@ -28312,14 +28323,14 @@ http://upload.wikimedia.org/wikipedia/commons/5/55/Layers_of_the_scalp_and_meninges.png https://upload.wikimedia.org/wikipedia/commons/e/eb/Double_cowlick.jpg - + - + BTO @@ -28355,7 +28366,7 @@ - + One of a a paired bundle of nerve fibers plus ganglia that run from the base of the skull to the coccyx. AAO:0010791 BAMS:S @@ -28374,14 +28385,14 @@ sympathetic trunk http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray847.png - + - + FMA-abduced-lr @@ -29284,7 +29295,7 @@ - + Gastric pits are indentations in the stomach which denote entrances to the gastric glands. They are deeper in the pylorus than they are in the other parts of the stomach. The human stomach has several million of these pits. UBERON:0000425 BTO:0002364 @@ -29301,14 +29312,14 @@ gastric pit http://upload.wikimedia.org/wikipedia/commons/7/73/Illu_stomach_layers.jpg - + - + BTO @@ -29367,7 +29378,7 @@ - + The outermost layer of trophoblast, produced by cytotrophoblast where there is direct contact with maternal decidua rather than blood. The EVT cells travel into the decidua, reacting with NK cells and invading maternal blood vessels feeding the placenta, softening the walls and replacing the lining with fetal tissue, a process called conversion. BTO:0002366 FMA:86561 @@ -29376,14 +29387,14 @@ UBERON:0000426 extravillous trophoblast - + - + BTO @@ -29658,7 +29669,7 @@ - + A group of nuclei located in the medial portion of the ventral thalamic nuclei. BTO:0002470 FMA:77795 @@ -29669,7 +29680,7 @@ UBERON:0000431 ventral medial complex of thalamus - + @@ -29682,7 +29693,7 @@ - + BTO-modified @@ -29723,7 +29734,7 @@ - + A portion of the nucleus of ansa lenticularis located medial to the posterior limb of the internal capsule, along the course of the ansa lenticularis and the inferior thalamic peduncle or as a separate nucleus within the internal capsule adjacent to the medial GLOBUS PALLIDUS (NeuroNames, http://rprcsgi.rprc. washington.edu/neuronames/ (September 28, 1998)). In non-primates, the entopeduncular nucleus is analogous to both the medial globus pallidus and the entopeduncular nucleus of human. BAMS:EN BTO:0002475 @@ -29739,14 +29750,14 @@ The term entopeduncular nucleus in human neuroanatomy refers to a portion of the nucleus of the ansa lenticularis described variously as located medial to the posterior limb of the internal capsule ( Riley-1943 ), along the course of the ansa lenticularis and the inferior thalamic peduncle ( Crosby-1962 ), or as a separate nucleus within the internal capsule adjacent to the medial segment of the globus pallidus ( Nomina-1983 ).[NN] endopeduncular nucleus - + - + NN @@ -30053,8 +30064,8 @@ - - + + @@ -30067,11 +30078,11 @@ UBERON:0000437 arachnoid barrier layer - + - + @@ -30084,13 +30095,13 @@ - + cjm - + FMA @@ -31190,9 +31201,9 @@ - - - + + + The paired glands located slightly posterior and to the left and right of the opening of the vagina in the superficial perineal pouch in females; they secrete mucus to lubricate the vagina and are homologous to bulbourethral (Cowper's) glands in males. resolve difference in WP vs MP, superficial vs deep perineal pouch @@ -31218,15 +31229,15 @@ major vestibular gland - + - + - + @@ -31239,19 +31250,19 @@ - + FMA-abduced-lr - + Wikipedia - + Wikipedia @@ -31423,14 +31434,15 @@ - - + + + Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body. @@ -31465,14 +31477,14 @@ organism substance - + - + this relationship may be too strong and may be weakened in future @@ -31590,6 +31602,16 @@ + + + + + + + + + + @@ -32402,8 +32424,8 @@ Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument. CARO:0000032 - CARO:DOS http://orcid.org/0000-0001-9114-8737 + https://orcid.org/0000-0002-7073-9172 @@ -32441,7 +32463,7 @@ - + Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue. @@ -32577,9 +32599,9 @@ A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis. - CARO:DOS http://orcid.org/0000-0001-9114-8737 https://cedar.bio.indiana.edu/trac/env/ontologies/ticket/279 + https://orcid.org/0000-0002-7073-9172 @@ -32809,7 +32831,7 @@ - + @@ -32849,7 +32871,7 @@ basal lamina of epithelium https://upload.wikimedia.org/wikipedia/commons/6/65/Basal_lamina.jpg - + @@ -32862,7 +32884,7 @@ - + FMA @@ -33509,7 +33531,7 @@ - + The ileocecal valve is a sphincter muscle situated at the junction of the small intestine (ileum) and the large intestine. Its critical function is to limit the reflux of colonic contents into the ileum. FMA:15973 @@ -33529,7 +33551,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + @@ -33542,7 +33564,7 @@ - + FMA @@ -33593,13 +33615,21 @@ - + + + + - - + + + + + + + A thin muscle connecting the junction between the duodenum, jejunum, and duodenojejunal flexure to connective tissue surrounding the superior mesenteric artery and coeliac artery. FMA:20509 SCTID:279979000 @@ -33613,30 +33643,14 @@ suspensory ligament of duodenum http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray1042.png - - - - - + - - Obol - - - - - - Obol - - - - - + Obol @@ -33690,8 +33704,8 @@ - - + + A muscle that arises from the lower half of the ligamentum nuchæ, from the spinous process of the seventh cervical vertebra, and from the spinous processes of the upper three or four thoracic vertebræ and inserts the mastoid process of the temporal bone, and into the rough surface on the occipital bone just below the lateral third of the superior nuchal line[WP,modified]. Extend, rotate, and laterally flex the head FMA:22653 @@ -33703,11 +33717,11 @@ splenius capitis http://upload.wikimedia.org/wikipedia/commons/5/51/Splenius.png - + - + @@ -33720,14 +33734,14 @@ - + Ligamentum nuchae spinous process of C7-T6 dbpedia - + Wikipedia:Mastoid_process @@ -34239,7 +34253,7 @@ - + @@ -34275,14 +34289,14 @@ abdomen - + - + MA @@ -34682,7 +34696,7 @@ - + Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO] The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] @@ -34719,14 +34733,14 @@ ectoderm http://upload.wikimedia.org/wikipedia/commons/1/19/Gray32.png - + - + Bgee:AN @@ -34785,7 +34799,7 @@ - + Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. The Bilateria are triploblastic (with true endoderm, mesoderm, and ectoderm) (...).[well established][VHOG] endodermal @@ -34821,14 +34835,14 @@ http://upload.wikimedia.org/wikipedia/commons/c/c0/Endoderm2.png http://upload.wikimedia.org/wikipedia/commons/d/df/Gray10.png - + - + Bgee:AN @@ -34879,7 +34893,7 @@ - + The middle germ layer of the embryo, between the endoderm and ectoderm. Primary germ layer that is the middle of the embryonic germ layers.[AAO] @@ -34923,7 +34937,7 @@ mesoderm http://upload.wikimedia.org/wikipedia/commons/e/e8/Mesoderm.png - + @@ -34936,7 +34950,7 @@ - + Bgee:AN @@ -35298,7 +35312,7 @@ - + @@ -35341,7 +35355,7 @@ proctodeum https://github.com/obophenotype/uberon/issues/685 - + @@ -35354,7 +35368,7 @@ - + EHDAA2 @@ -35791,7 +35805,7 @@ - + @@ -35837,14 +35851,14 @@ posterior commissure http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png - + - + FMA @@ -35946,7 +35960,7 @@ - + One of the parts of a holometabolous insect larva that will become a portion of the outside of the adult insect during the pupal transformation. BTO:0004658 FBbt:00001761 @@ -35960,7 +35974,7 @@ Though inaginal discs are sometimes described as “epithelial sacs”, we do not classify them as such, because an “epithelial sac” is defined in Uberon as being a single epithelium, whereas imaginal discs are made of several epithelia with distinct properties. imaginal disc - + @@ -35973,7 +35987,7 @@ - + Wikipedia @@ -36031,7 +36045,7 @@ - + @@ -36098,14 +36112,14 @@ cranial nerve II - + - + EHDAA2 @@ -36235,7 +36249,7 @@ - + The frontal nerve is the largest branch of the ophthalmic, and may be regarded, both from its size and direction, as the continuation of the nerve. It enters the orbit through the supraorbital foramen, and runs forward between the Levator palpebræ superioris and the periosteum. Midway between the apex and base of the orbit it divides into two branches, supratrochlear nerve and supraorbital nerve. [WP,unvetted]. FMA:52638 @@ -36251,14 +36265,14 @@ frontal nerve (branch of ophthalmic) http://upload.wikimedia.org/wikipedia/commons/4/45/Gray787.png - + - + FMA @@ -36334,8 +36348,8 @@ - - + + @@ -36390,11 +36404,11 @@ stomach https://upload.wikimedia.org/wikipedia/commons/e/e0/Stomach_diagram.svg - + - + @@ -36413,14 +36427,14 @@ - + absent in lampreys and hagfishes ISBN:0073040584 - + ISBN:0486692132 @@ -36513,7 +36527,7 @@ - + A membranous fold of the heart that prevents reflux of fluid. @@ -36549,14 +36563,14 @@ cardiac valve - + - + PMID:15797462 @@ -36608,7 +36622,7 @@ - + @@ -36656,7 +36670,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb https://upload.wikimedia.org/wikipedia/commons/9/91/Aorta_scheme.jpg - + @@ -36669,7 +36683,7 @@ - + EHDAA2 @@ -36749,7 +36763,7 @@ - + @@ -36818,14 +36832,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.3/assets/3d-vh-f-heart.glb https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.3/assets/3d-vh-m-heart.glb - + - + MA @@ -37015,7 +37029,7 @@ - + The most superficial muscle on the medial side of the thigh. It is thin and flattened, broad above, narrow and tapering below. It arises by a thin aponeurosis from the anterior margins of the lower half of the symphysis pubis and the upper half of the pubic arch. AAO has minor and major gracilis, which merge together, attaching the pelvic rim to the tibiofibula - this could be grouped with the mammalian gracilis at some level; note the current insertion site is 'tibia' which would be modified for amphibian tibiafibula @@ -37037,7 +37051,7 @@ gracilis http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + @@ -37050,7 +37064,7 @@ - + pes anserinus dbpedia @@ -37200,7 +37214,7 @@ - + @@ -37225,7 +37239,7 @@ - + The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. requires review for applicability to invertebrate structures, e.g. synganglion @@ -37288,11 +37302,11 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + @@ -37305,13 +37319,13 @@ - + FMA - + Bgee:AN @@ -37412,9 +37426,9 @@ - - - + + + @@ -37485,15 +37499,15 @@ http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg - + - + - + @@ -37506,21 +37520,21 @@ - + GO ISBN:0471888893 - + FMA MA - + Wikipedia @@ -38081,9 +38095,9 @@ - - - + + + @@ -38108,7 +38122,7 @@ - + @@ -38163,44 +38177,44 @@ cornea http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + MA - + MA - + FMA-isa - + definitional @@ -38388,10 +38402,10 @@ + + + - - - The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. @@ -38441,44 +38455,44 @@ retina http://upload.wikimedia.org/wikipedia/commons/e/ed/Human_eye_cross-sectional_view_grayscale.png - + - + - + - + - + FMA - + FMA - + FMA - + EHDAA2 @@ -38646,8 +38660,8 @@ - - + + @@ -38682,24 +38696,24 @@ eye - + - + - + PMID:21062451 - + PMID:21062451 @@ -38942,8 +38956,8 @@ - - + + @@ -39000,11 +39014,11 @@ sternum http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg - + - + @@ -39017,13 +39031,13 @@ - + FMA - + ISBN:0073040584 @@ -39111,7 +39125,7 @@ - + @@ -39153,14 +39167,14 @@ humerus http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg - + - + definitional @@ -39234,7 +39248,10 @@ - + + + + @@ -39247,7 +39264,12 @@ - + + + + + + @@ -39306,16 +39328,6 @@ pleura http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png - - - - - - - - - https://github.com/obophenotype/uberon/issues/86 - @@ -39530,7 +39542,7 @@ - + @@ -39554,14 +39566,14 @@ trochanter - + - + MA @@ -39618,7 +39630,7 @@ - + @@ -39665,7 +39677,7 @@ femur http://upload.wikimedia.org/wikipedia/commons/7/73/Gray252.png - + @@ -39678,7 +39690,7 @@ - + definitional @@ -39913,7 +39925,7 @@ - + @@ -39938,14 +39950,14 @@ metatarsus region - + - + PHENOSCAPE:ni @@ -40213,7 +40225,7 @@ - + @@ -40275,14 +40287,14 @@ pons http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png - + - + neuronames @@ -40351,8 +40363,8 @@ - - + + An intromittent organ in certain biologically male organisms. In placental mammals, this also serves as the organ of urination. penile phallic @@ -40387,11 +40399,11 @@ penis http://upload.wikimedia.org/wikipedia/commons/8/87/Labelled_flaccid_penis.jpg - + - + @@ -40404,13 +40416,13 @@ - + Wikipedia - + EHDAA2 @@ -41360,8 +41372,8 @@ - - + + @@ -41402,11 +41414,11 @@ http://upload.wikimedia.org/wikipedia/commons/1/1b/Illu_repdt_female.jpg http://upload.wikimedia.org/wikipedia/commons/a/a4/Vaginal_opening_-_english_description.jpg - + - + @@ -41419,13 +41431,13 @@ - + FMA - + Wikipedia @@ -41884,7 +41896,7 @@ - + @@ -41947,14 +41959,14 @@ vas deferens http://upload.wikimedia.org/wikipedia/commons/d/d1/Male_anatomy_en.svg - + - + FMA @@ -42084,7 +42096,7 @@ - + Tough but flexible, non-mineral outer coverings of an organism, or parts of an organism, that provide protection. Cuticles are non-homologous, differing in their origin, structure and chemical composition[WP]. cuticular @@ -42099,14 +42111,14 @@ EDITOR_NOTE TODO - check cuticle vs exoskeleton. Note that GO has a very generic definition of cuticle. See also arthropod-anatomy ontology. Note in ncit Cuticle is a plant part cuticle - + - + Rieger - Evolution of the Cuticle in the Lower Eumetazoa @@ -43008,8 +43020,8 @@ - - + + The head of the radius has a cylindrical form, and on its upper surface is a shallow cup or fovea for articulation with the capitulum (or capitellum) of the humerus. The circumference of the head is smooth; it is broad medially where it articulates with the radial notch of the ulna, narrow in the rest of its extent, which is embraced by the annular ligament. The deepest point in the fovea is not axi-symmetric with the long axis of the radius, creating a cam effect during pronation and supination[WP]. FMA:33773 SCTID:181941003 @@ -43022,24 +43034,24 @@ head of radius http://upload.wikimedia.org/wikipedia/commons/4/47/Gray214.png - + - + - + FMA - + FMA @@ -43347,7 +43359,7 @@ - + @@ -43408,14 +43420,14 @@ http://upload.wikimedia.org/wikipedia/commons/b/b2/TE-Nervous_system_diagram.svg http://upload.wikimedia.org/wikipedia/commons/b/ba/Nervous_system_diagram.png - + - + Bgee:AN @@ -43503,7 +43515,7 @@ - + The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. @@ -43551,7 +43563,7 @@ central nervous system - + @@ -43565,7 +43577,7 @@ - + Bgee:AN @@ -44130,7 +44142,7 @@ - + A nerve that transmits from sensory receptors on the surface of the body to the central nervous system. AEO:0000201 EHDAA2:0003200 @@ -44144,14 +44156,14 @@ sensory nerve - + - + AEO @@ -44747,8 +44759,8 @@ - - + + @@ -44796,11 +44808,11 @@ strand of hair http://upload.wikimedia.org/wikipedia/commons/2/25/Gray945.png - + - + @@ -44813,13 +44825,13 @@ - + FMA - + FMA @@ -44902,8 +44914,8 @@ - - + + A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP]. consider splitting class One of the extraembryonic fetal membranes that balloons out from the fetal midgut. [TFD][VHOG] @@ -44933,11 +44945,11 @@ yolk sac http://upload.wikimedia.org/wikipedia/commons/1/17/Gray22.png - + - + @@ -44956,13 +44968,13 @@ - + ISBN:0073040584 - + ISBN:0073040584 @@ -45120,7 +45132,7 @@ - + A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED]. A funnel-shaped fibromuscular tube that conducts food to the ESOPHAGUS, and air to the LARYNYX and LUNGS. It is located posterior to the NASAL CAVITY; ORAL CAVITY; and LARYNX, and extends from the SKULL BASE to the inferior border of the CRICOID CARTILAGE anteriorly and to the inferior border of the C6 vertebra posteriorly. It is divided into the NASOPHARYNX; OROPHARYNX; and HYPOPHARYNX (laryngopharynx)[MESH:A03.867]. Anatomical cavity bounded by the derivatives of the branchial arches.[AAO] @@ -45161,14 +45173,14 @@ Consider generalizing to deuterostome pharynx chordate pharynx - + - + EHDAA2 @@ -45609,7 +45621,7 @@ - + @@ -45645,14 +45657,14 @@ hindgut http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray472.png - + - + Wikipedia @@ -46058,8 +46070,8 @@ - - + + @@ -46112,11 +46124,11 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + - + @@ -46130,13 +46142,13 @@ - + EHDAA2 - + ISBN:0073040584 @@ -46175,7 +46187,7 @@ - + A system of neurons that has the specialized function to produce and secrete hormones, and that constitutes, in whole or in part, an endocrine organ or system. currently intended for invert structure; alt definitions include: organs in which intimate relationships between axons and terminal blood vessels are established BTO:0002106 @@ -46190,14 +46202,14 @@ brain areas from which substances enter blood for example, the neurohypophysis from which oxytocin and vasopressin enter blood. arthropod neurohemal organ - + - + BTO @@ -46303,7 +46315,7 @@ - + @@ -46322,14 +46334,14 @@ will be ceded to arthropod anatomy ontology corpus cardiacum - + - + BTO-modified @@ -46360,8 +46372,8 @@ - - + + One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone)[BTO]. In Lepidoptera species, the corpus allatum acts as a release site for prothoracicotropic hormone which is generated by the brain In many Diptera species, the corpus allatum is fused with the corpus cardiacum, forming Weismann's ring @@ -46378,11 +46390,11 @@ will be ceded to arthropod anatomy ontology corpus allatum - + - + @@ -46395,13 +46407,13 @@ - + BTO-modified - + Wikipedia @@ -46438,9 +46450,9 @@ - - - + + + Prominent lobed neuropils found in annelids and all arthropods except crustaceans. They are thought to be involved in olfactory associative learning and memory[MESH] Mushroom body neuropils are divided into calyces, pedunculus, and its subsequent lobes. In Drosophila these are the alpha, beta, and gamma lobes. @@ -46461,34 +46473,34 @@ mushroom body - + - + - + - + annelids and arthropods - + Wikipedia - + Wikipedia @@ -46531,7 +46543,7 @@ - + @@ -46549,14 +46561,14 @@ will be ceded to arthropod anatomy ontology pars intercerebralis - + - + FBbt @@ -46578,6 +46590,14 @@ + + + + + + + + @@ -46792,7 +46812,7 @@ - + @@ -46838,7 +46858,7 @@ ventral pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png - + @@ -46851,7 +46871,7 @@ - + EHDAA2 @@ -47213,7 +47233,7 @@ - + A zone of skin that is part of a back [Automatically generated definition]. EMAPA:36392 FMA:10462 @@ -47229,7 +47249,7 @@ EDITOR_NOTE TODO - distinguish between entire skin of region and arbitrary zone of skin on region skin of back - + @@ -47242,7 +47262,7 @@ - + MA @@ -47283,7 +47303,7 @@ - + The head of pancreas is a portion of the pancreas that is lodged within the curve of the duodenum, and is flattened anteriorly (from before). The other parts of the pancreas are the body and the tail. Its upper border is overlapped by the superior part of the duodenum and its lower overlaps the horizontal part; its right and left borders overlap in front, and insinuate themselves behind, the descending and ascending parts of the duodenum respectively. [WP,unvetted]. Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG] @@ -47308,14 +47328,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-female/v1.3/assets/3d-vh-f-pancreas.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb - + - + EHDAA2-inferred WP @@ -47355,8 +47375,8 @@ - - + + A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP]. not homologous to the external carotid of zebrafish (Goodrich, 1958) - http://zfish.nichd.nih.gov/zfatlas/Intro%20Page/comparative.html; check XAO @@ -47388,11 +47408,11 @@ https://sourceforge.net/tracker/?func=detail&aid=3486863&group_id=76834&atid=1127722 http://upload.wikimedia.org/wikipedia/commons/1/13/External_carotid_a.gif - + - + @@ -47405,13 +47425,13 @@ - + EHDAA2 - + FMA @@ -47712,7 +47732,7 @@ - + @@ -47752,7 +47772,7 @@ pericardial cavity - + @@ -47765,7 +47785,7 @@ - + Wikipedia @@ -48451,7 +48471,7 @@ - + @@ -48482,14 +48502,14 @@ endocardium of ventricle - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -48626,7 +48646,7 @@ - + @@ -48653,14 +48673,14 @@ myocardium of ventricle - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -49133,9 +49153,9 @@ - - - + + + Skeletal element within the mouth (or in some species, upper part of the digestive tract) that is composed of dentine and is used in procuring or masticating food. @@ -49177,34 +49197,34 @@ calcareous tooth http://upload.wikimedia.org/wikipedia/commons/1/14/Teeth_by_David_Shankbone.jpg - + - + - + - + XAO-modified - + ZFA-modified - + cjm @@ -49366,7 +49386,7 @@ - + The second vertebral bone in the vertebral column. Vertebra that is posteriorly adjacent to vertebra 1.[TAO] @@ -49401,14 +49421,14 @@ vertebral bone 2 - + - + FMA @@ -49932,8 +49952,8 @@ - - + + The Pectoralis minor is a thin, triangular muscle, situated at the upper part of the chest, beneath the Pectoralis major. [WP,unvetted]. EHDAA2:0001425 @@ -49958,11 +49978,11 @@ pectoralis minor https://upload.wikimedia.org/wikipedia/commons/5/5d/Pectoralis_minor.png - + - + @@ -49975,14 +49995,14 @@ - + third to fifth ribs near their costal cartilages dbpedia - + medial border and superior surface of the coracoid process of the scapula dbpedia @@ -50024,7 +50044,7 @@ - + The external jugular vein receives the greater part of the blood from the exterior of the cranium and the deep parts of the face, being formed by the junction of the posterior division of the posterior facial with the posterior auricular vein. [WP,unvetted]. Vein which collects blood from the muscles of the head and tongue and the thyroid gland.[AAO] @@ -50049,14 +50069,14 @@ external jugular vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA @@ -50195,7 +50215,7 @@ - + A thin musculomebranous barrier that separates the abdominal and thoracic cavities. Often used for breathing control. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs[GO]. @@ -50234,14 +50254,14 @@ diaphragm - + - + definitional @@ -50303,8 +50323,8 @@ - - + + The anterior jugular vein begins near the hyoid bone by the confluence of several superficial veins from the submaxillary region. It descends between the median line and the anterior border of the Sternocleidomastoideus, and, at the lower part of the neck, passes beneath that muscle to open into the termination of the external jugular, or, in some instances, into the subclavian vein. It varies considerably in size, bearing usually an inverse proportion to the external jugular; most frequently there are two anterior jugulars, a right and left; but sometimes only one. Its tributaries are some laryngeal veins, and occasionally a small thyroid vein. Just above the sternum the two anterior jugular veins communicate by a transverse trunk, the venous jugular arch, which receive tributaries from the inferior thyroid veins; each also communicates with the internal jugular. There are no valves in this vein. [WP,unvetted]. @@ -50323,24 +50343,24 @@ anterior jugular vein http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray558.png - + - + - + Wikipedia - + FMA Wikipedia @@ -50390,8 +50410,8 @@ - - + + A paired dermal or endochondral bone that is part of the pectoral girdle. The clavicle may be in contact with the interclavicle or coracoid and forms an attachment site for pectoral musculature. [PHENOSCAPE:ad]. Slender, paired bones of intramembranous origin that invest the anterior margins of the procoracoids.[AAO] @@ -50428,11 +50448,11 @@ clavicle bone https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg - + - + @@ -50445,14 +50465,14 @@ - + mah ISBN:978-0-12-319060-4 - + from secondary cartilage of fusion ISBN:978-0-12-319060-4 @@ -50528,8 +50548,8 @@ - - + + A superficial vein of the upper limb that communicates with the basilic vein via the median cubital vein at the elbow and is located in the superficial fascia along the anterolateral surface of the biceps brachii muscle. Superiorly the cephalic vein passes between the deltoid and pectoralis major muscles and through the deltopectoral triangle, where it empties into the axillary vein. It is often visible through the skin, and its location in the deltopectoral groove is fairly consistent, making this site a good candidate for cannulation. It is often referred to as the 'House-man's Friend' for this reason and is generally a good place for cannulaton when a large bore cannula needs to be sited. [WP,modified]. EMAPA:25075 @@ -50549,24 +50569,24 @@ cephalic vein http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray574.png - + - + - + FMA/obol - + FMA/obol @@ -50603,9 +50623,9 @@ - - - + + + The sternohyoid muscle is a thin, narrow muscle attaching the hyoid bone to the sternum, one of the paired strap muscles of the infrahyoid muscles serving to depress the hyoid bone. It is innervated by the ansa cervicalis. The muscle arises from the posterior border of the medial end of the clavicle, the posterior sternoclavicular ligament, and the upper and posterior part of the manubrium sterni. Passing upward and medially, it is inserted by short tendinous fibers into the lower border of the body of the hyoid bone. [WP,unvetted]. The sternohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the hyoid appratus and the sternum.[FEED] @@ -50631,15 +50651,15 @@ sternohyoid muscle https://upload.wikimedia.org/wikipedia/commons/6/67/Sternohyoid_muscle.PNG - + - + - + @@ -50652,21 +50672,21 @@ - + inferred dbpedia - + manubrium of sternum dbpedia - + dbpedia @@ -50734,8 +50754,8 @@ - - + + The omohyoid muscle is a muscle at the front of the neck that consists of two bellies separated by an intermediate tendon. It belongs to the group of infrahyoid muscles. [WP,unvetted]. The omohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the hyoid appratus and the scapula.[FEED] @@ -50757,11 +50777,11 @@ omohyoid muscle http://upload.wikimedia.org/wikipedia/commons/b/b0/Gray1210.png - + - + @@ -50774,14 +50794,14 @@ - + inferred dbpedia - + dbpedia @@ -50836,9 +50856,9 @@ - - - + + + The Sternothyreoideus (or Sternothyroid muscle) is shorter and wider than the Sternohyoideus, beneath which it is situated. It arises from the posterior surface of the manubrium sterni, below the origin of the Sternohyoideus, and from the edge of the cartilage of the first rib, and sometimes that of the second rib, it is inserted into the oblique line on the lamina of the thyroid cartilage. This muscle is in close contact with its fellow at the lower part of the neck, but diverges somewhat as it ascends; it is occasionally traversed by a transverse or oblique tendinous inscription. [WP,unvetted]. The sternothyroid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical plexus; it attaches to the thyroid cartilage and the sternum.[FEED] @@ -50862,15 +50882,15 @@ sternothyroid muscle http://upload.wikimedia.org/wikipedia/commons/1/10/Sternothyroideus.png - + - + - + @@ -50883,20 +50903,20 @@ - + inferred dbpedia - + dbpedia - + dbpedia @@ -50958,9 +50978,9 @@ - - - + + + The thyrohyoid muscle is a small, quadrilateral muscle appearing like an upward continuation of the Sternothyreoideus. It belongs to the infrahyoid muscles group. It arises from the oblique line on the lamina of the thyroid cartilage, and is inserted into the lower border of the greater cornu of the hyoid bone. [WP,unvetted]. The thyrohyoid is a somitic muscle that participates in oral/pharyngeal behaviors and is innervated by C1 and Cranial Nerve XII ; it attaches to the thyroid cartilage and the hyoid apparatus.[FEED] @@ -50982,15 +51002,15 @@ thyrohyoid muscle https://upload.wikimedia.org/wikipedia/commons/a/aa/Thyrohyoid_muscle.PNG - + - + - + @@ -51003,21 +51023,21 @@ - + first cervical nerve via hypoglossal nerve dbpedia - + first cervical nerve via hypoglossal nerve dbpedia - + dbpedia @@ -51085,18 +51105,34 @@ - - + + + + + + + + - - - - + + + + + + + + + + + + + + The respiratory muscles that arise from the lower border of one rib and insert into the upper border of the adjoining rib. Inspiration by active expansion of the thorax evolved later, in the ancestor of reptiles, birds, and mammals. This was powered originally by the intercostal muscles (as in lizards or crocodilians) and later (in mammals only) by a muscular diaphragm.[well established][VHOG] BTO:0005281 @@ -51125,48 +51161,26 @@ intercostal muscle http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png - - - - - - - - - + - + - + dbpedia - + EHDAA2 - - - - - ribs 1-11 - dbpedia - - - - - - ribs 2-12 - dbpedia - @@ -51207,18 +51221,18 @@ - - + + - - - - + + + + The latissimus dorsi is the larger, flat, dorso-lateral muscle on the trunk, posterior to the arm, and partly covered by the trapezius on its median dorsal region. [WP,unvetted]. In humans it inserts along a roughened line deep in the groove. In other mammals (most, I believe) it is an actual projection, the latissimus dorsi process [FEED:rd] [https://github.com/obophenotype/uberon/issues/1192] @@ -51247,66 +51261,66 @@ latissimus dorsi muscle https://upload.wikimedia.org/wikipedia/commons/7/7d/Latissimus_dorsi.png - + - + - + - + - + - + - + EHDAA2 - + EHDAA2 - + spinous processes of thoracic T7-T12 thoracolumbar fascia iliac crest and inferior 3 or 4 ribs inferior angle of scapula dbpedia - + floor of intertubercular groove of the humerus dbpedia - + dbpedia - + dbpedia @@ -51622,7 +51636,7 @@ - + The caudate lobe (posterior hepatic segment I, Spigelian lobe) is situated upon the postero-superior surface of the liver on the right lobe of the liver, opposite the tenth and eleventh thoracic vertebrae. It is bounded on the left side by the physiological division of the liver called the ligamentum venosum. It is bounded, below, by the porta; on the right, by the fossa for the inferior vena cava; and, on the left, by the fossa for the ductus venosus. It looks backward, being nearly vertical in position; it is longer from above downward than from side to side, and is somewhat concave in the transverse direction. The caudate process is a small elevation of the hepatic substance extending obliquely and laterally, from the lower extremity of the caudate lobe to the under surface of the right lobe. It is situated behind the porta, and separates the fossa for the gall-bladder from the commencement of the fossa for the inferior vena cava. Budd-Chiari syndrome, caused by occlusion of hepatic venous outflow, can lead to hypertrophy of the caudate lobe due to its own caval anastomosis that allows for continued function of this lobe of the liver. [WP,unvetted]. Check left vs right in mouse and human The portion of the right lobe of the liver between the fissure of the ligamentum venosum and the bare area of the liver. It ends into the superior recess of the lesser peritoneal sac. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG] @@ -51659,7 +51673,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.2/assets/3d-vh-f-liver.glb https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb - + @@ -51672,7 +51686,7 @@ - + FMA @@ -51768,7 +51782,7 @@ - + A lobe of tissue that is part of a thyroid gland. Thus, a thyroid capable of forming iodotyrosines and iodothyronines is present in all vertebrates. (...) Certain morphologic changes occur after the biochemical evolution of the thyroid has ceased. In the adult lamprey and in most bony fishes, the gland is not encapsulated. (...) In cartilaginous fish, the thyroid is encapsulated. In the higher vertebrate forms, the thyroid is a one- or two-lobed encapsulated structure.[well established][VHOG] EHDAA2:0002032 @@ -51790,14 +51804,14 @@ lobe of thyroid gland http://upload.wikimedia.org/wikipedia/commons/9/9e/Gray1174.png - + - + FMA-abduced-lr @@ -51971,9 +51985,9 @@ - - - + + + The Longus colli muscle is a muscle of the human body. The Longus colli is situated on the anterior surface of the vertebral column, between the atlas and the third thoracic vertebra. It is broad in the middle, narrow and pointed at either end, and consists of three portions, a superior oblique, an inferior oblique, and a vertical. The superior oblique portion arises from the anterior tubercles of the transverse processes of the third, fourth, and fifth cervical vertebræ and, ascending obliquely with a medial inclination, is inserted by a narrow tendon into the tubercle on the anterior arch of the atlas. The inferior oblique portion, the smallest part of the muscle, arises from the front of the bodies of the first two or three thoracic vertebræ; and, ascending obliquely in a lateral direction, is inserted into the anterior tubercles of the transverse processes of the fifth and sixth cervical vertebræ. The vertical portion arises, below, from the front of the bodies of the upper three thoracic and lower three cervical vertebræ, and is inserted into the front of the bodies of the second, third, and fourth cervical vertebræ. [WP,unvetted]. EMAPA:37654 FMA:13370 @@ -51992,35 +52006,35 @@ longus colli muscle https://upload.wikimedia.org/wikipedia/commons/a/a6/Longus_colli.png - + - + - + - + FMA-modified - + Transverse processes of C-5 to T-3 dbpedia - + dbpedia @@ -52074,9 +52088,9 @@ - - - + + + The Scalenus medius, the largest and longest of the three scalene muscles, arises from the posterior tubercles of the transverse processes of the lower six cervical vertebræ. It descendes along the side of the vertebral column to insert by a broad attachment into the upper surface of the first rib, between the tubercle and the subclavian groove. The brachial plexus and the subclavian artery pass anterior to it. Because it elevates the upper ribs, the middle scalene muscle is also one of the accessory muscles of respiration. [WP,unvetted]. EMAPA:37738 @@ -52097,35 +52111,35 @@ scalenus medius https://upload.wikimedia.org/wikipedia/commons/f/fa/Scalenus_medius.png - + - + - + - + Ventral rami of the third to eighth cervical spinal nerves dbpedia - + dbpedia - + dbpedia @@ -52168,7 +52182,7 @@ - + The Scalenus posterior (Scalenus posticus), the smallest and most deeply seated of the three Scaleni, arises, by two or three separate tendons, from the posterior tubercles of the transverse processes of the lower two or three cervical vertebræ, and is inserted by a thin tendon into the outer surface of the second rib, behind the attachment of the serratus ventralis. It is occasionally blended with the Scalenus medius. [WP,unvetted]. EMAPA:37737 @@ -52188,14 +52202,14 @@ scalenus posterior https://upload.wikimedia.org/wikipedia/commons/f/f3/Scalenus_posterior.png - + - + transverse processes of C4 - C6 dbpedia @@ -52256,11 +52270,11 @@ - - - - - + + + + + The serratus ventralis is a muscle that originates on the surface of the upper eight or nine ribs at the side of the chest and inserts along the entire anterior length of the medial border of the scapula. [WP,unvetted]. EHDAA2:0001832 @@ -52286,57 +52300,57 @@ serratus ventralis https://upload.wikimedia.org/wikipedia/commons/c/c6/Serratus_anterior.png - + - + - + - + - + - + long thoracic nerve dbpedia - + EHDAA2 - + fleshy slips from the outer surface of upper 8 or 9 ribs dbpedia - + costal aspect of medial margin of the scapula dbpedia - + dbpedia @@ -52385,7 +52399,7 @@ - + The serratus dorsalis superior is a thin, quadrilateral muscle, situated at the upper and back part of the thorax. It arises by a thin and broad aponeurosis from the lower part of the ligamentum nuchae, from the spinous processes of the seventh cervical and upper two or three thoracic vertebræ and from the supraspinal ligament. Inclining downward and lateralward it becomes muscular, and is inserted, by four fleshy digitations, into the upper borders of the second, third, fourth, and fifth ribs, a little beyond their angles. [WP,unvetted]. EMAPA:37698 FMA:13401 @@ -52403,7 +52417,7 @@ serratus dorsalis superior muscle - + @@ -52416,7 +52430,7 @@ - + C7 thru T3 in human dbpedia @@ -52463,7 +52477,7 @@ - + A muscle that originates from the vertebrae and inserts in the ribs. EMAPA:37697 FMA:13402 @@ -52483,7 +52497,7 @@ serratus dorsalis inferior muscle https://upload.wikimedia.org/wikipedia/commons/a/aa/Serratus_posterior.PNG - + @@ -52496,7 +52510,7 @@ - + T11 through L2 in human dbpedia @@ -52545,14 +52559,14 @@ - + - + A paired muscle in the superficial layers of the anterior portion of the neck. It acts to flex and rotate the head. It also acts as an accessory muscle of inspiration, along with the scalene muscles of the neck. [WP,unvetted]. TODO: sternocleidomastoid = sternomastoid + Cleidomastoideus. Origin: from manubrium sterni (sterno) and clavicle (cleido) and it's insertion at the mastoid process of the temporal bone. @@ -52590,25 +52604,25 @@ http://upload.wikimedia.org/wikipedia/commons/6/61/Gray512.png http://upload.wikimedia.org/wikipedia/commons/f/f9/Gray512.svg - + - + - + sensory: cervical plexus dbpedia - + manubrium sterni medial portion of the clavicle dbpedia @@ -52728,8 +52742,8 @@ - - + + @@ -52742,7 +52756,7 @@ - + The subscapularis is a large triangular muscle which fills the subscapular fossa and inserts into the lesser tubercle of the humerus and the front of the capsule of the shoulder-joint. [WP,unvetted]. EHDAA2:0001943 @@ -52766,34 +52780,34 @@ http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png - + - + - + - + Wikipedia - + EHDAA2 - + lesser tubercle of humerus dbpedia @@ -52847,7 +52861,7 @@ - + @@ -52906,14 +52920,14 @@ vertebral column - + - + cjm @@ -53092,14 +53106,14 @@ - + - + The parathyroid gland is an endocrine gland for secretion of parathyroid hormone, usually found as a pair, embedded in the connective tissue capsule on the posterior surface of the thyroid gland. Parathyroid regulates calcium and phosphorous metabolism. Any one of several small structures, usually four, attached to the dorsal surfaces of the lateral lobes of the thyroid gland. [TFD][VHOG] Either of the two pairs of small, spherical, encapsulated glands which develop from ventral growths of the third and fourth pharyngeal pouches and are closely associated with the external jugular veins. Calcitonin and parathyroid hormone are secreted by these glands.[AAO] @@ -53134,24 +53148,24 @@ parathyroid gland - + - + - + PMID:16313389 - + Wikipedia @@ -53701,7 +53715,7 @@ - + Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). AEO:0000111 BTO:0002422 @@ -53725,14 +53739,14 @@ mesothelium http://upload.wikimedia.org/wikipedia/commons/2/25/Mesothelium_peritoneal_wash_high_mag.jpg - + - + FMA @@ -53840,7 +53854,7 @@ - + @@ -53869,14 +53883,14 @@ http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb - + - + Wikipedia:Vitelline_vein @@ -53912,7 +53926,7 @@ - + A vein that drains the pelvis and lower limbs into the inferior vena cava. In human anatomy, the common iliac veins are formed by the external iliac veins and internal iliac veins and together, in the abdomen at the level of the fifth lumbar vertebrae, form the inferior vena cava. They drain blood from the pelvis and lower limbs. Both common iliac veins are accompanied along their course by common iliac arteries. @@ -53934,7 +53948,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb https://upload.wikimedia.org/wikipedia/commons/6/65/Iliac_veins.gif - + @@ -53947,7 +53961,7 @@ - + FMA-abduced-lr @@ -54235,7 +54249,7 @@ - + @@ -54271,14 +54285,14 @@ hepatic vein http://upload.wikimedia.org/wikipedia/commons/6/61/Gray1121.png - + - + FMA-abduced-lr @@ -54864,8 +54878,8 @@ - - + + The tail of the pancreas, located anatomically left near the hilum of the spleen, is not simply an anatomical distinction. The tail is the only part of the pancreas which contains Pancreatic Polypeptide (PP) cells, which are responsible for secreting pancreatic polypeptide to coordinate exocrine and islet enzyme release. PP cells are found in the tail's periphery. Beta cells and delta cells are found in the central part of the tail as with the rest of the pancreas. The cells described above are located exclusively in the islet cells; their secretions reach exocrine portions of the pancreas via the capillary network surrounding the islet cell populations. [WP,unvetted]. Hagfish and lampreys may have one or more endocrine buds - and later the vertebrate pancreas develop as independent ventral and dorsal buds that eventually fuse to become one organ.[well established][VHOG] @@ -54890,24 +54904,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-female/v1.3/assets/3d-vh-f-pancreas.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb - + - + - + FMA - + EHDAA2 @@ -54985,7 +54999,7 @@ - + @@ -55020,7 +55034,7 @@ http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png - + @@ -55033,7 +55047,7 @@ - + EHDAA2 @@ -55081,15 +55095,15 @@ - - + + - + @@ -55139,34 +55153,34 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + - + - + - + EHDAA2 - + Wikipedia - + Wikipedia @@ -55256,8 +55270,8 @@ - - + + A blind-ended tube connected to the cecum, from which it develops embryologically[WP]. @@ -55301,24 +55315,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + - + - + http://orcid.org/0000-0002-1572-1316 - + Wikipedia @@ -55384,7 +55398,7 @@ - + @@ -55432,7 +55446,7 @@ colon - + @@ -55446,7 +55460,7 @@ - + FMA @@ -55511,7 +55525,7 @@ - + Section of colon which is distal to the cecum and proximal to the transversecolon.[FMA,modified]. in MA, this is a subclass of colon @@ -55540,7 +55554,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + @@ -55553,7 +55567,7 @@ - + Wikipedia @@ -55609,7 +55623,7 @@ - + The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon[BTO,modified]. BTO:0000272 @@ -55636,7 +55650,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + @@ -55649,7 +55663,7 @@ - + Wikipedia @@ -55692,7 +55706,7 @@ - + The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon. BTO:0000641 @@ -55719,7 +55733,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + @@ -55732,7 +55746,7 @@ - + Wikipedia @@ -55774,7 +55788,7 @@ - + The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity. BTO:0000645 @@ -55805,7 +55819,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + @@ -55818,7 +55832,7 @@ - + Wikipedia @@ -56245,7 +56259,7 @@ - + @@ -56298,7 +56312,7 @@ pyloric antrum http://upload.wikimedia.org/wikipedia/commons/3/31/Gray1046.svg - + @@ -56311,7 +56325,7 @@ - + Wikipedia @@ -56808,7 +56822,7 @@ - + @@ -56824,7 +56838,7 @@ portal lobule - + @@ -56837,7 +56851,7 @@ - + MA MP @@ -56860,7 +56874,7 @@ - + @@ -56885,14 +56899,14 @@ UBERON:0001172 hepatic acinus - + - + cjm @@ -57124,10 +57138,10 @@ - - - - + + + + @@ -57155,19 +57169,19 @@ common hepatic duct http://upload.wikimedia.org/wikipedia/commons/4/48/Illu_liver_gallbladder.jpg - + - + - + - + @@ -57180,25 +57194,25 @@ - + MA - + Wikipedia - + Wikipedia - + definitional @@ -57452,7 +57466,7 @@ - + @@ -57493,14 +57507,14 @@ peritoneal cavity - + - + Wikipedia @@ -57559,8 +57573,8 @@ - - + + classified as a cavity in EHDAA2, organ segment in FMA. We hedge and use a union UBERON:0006299 EHDAA2:0001958 @@ -57578,24 +57592,24 @@ UBERON:0001180 superior recess of lesser sac - + - + - + EMAPA - + EHDAA2 @@ -60454,14 +60468,14 @@ - + - + The protruding lymphoid tissue located on the mucosa of the intestine that is composed of densely packed B cell follicles. Reptiles have accumulations of lymphocytes in their guts that may be primitive Peyer's patches (Zapata and Solas). @@ -60488,11 +60502,11 @@ Peyer's patch - + - + @@ -60506,13 +60520,13 @@ - + EDITOR_NOTE check this - + PMID:PMID:20181529 @@ -60591,8 +60605,8 @@ - - + + A compound tubular submucosal gland found in that portion of the duodenum which is above the hepatopancreatic sphincter (Sphincter of Oddi). The main function of these glands is to produce a mucus-rich alkaline secretion (containing bicarbonate)[WP]. currently defined as equivalent to any submucosal gland in the duodenum. Said to be absent outside mammlian (Andrew 1959) but Ziswiler and Farner (1972) noted similar glands at the gastroduodenal junction of some birds @@ -60617,30 +60631,24 @@ duodenal gland - + - + - - compound tubular - - - - - + FMA, modified - + unclear for Aves ISBN:9780521617147 @@ -60695,7 +60703,7 @@ - + @@ -60742,7 +60750,7 @@ intestinal villus http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg - + @@ -60755,7 +60763,7 @@ - + ZFA @@ -60851,7 +60859,7 @@ - + The pancreatic veins consist of several small vessels which drain the body and tail of the pancreas, and open into the trunk of the great pancreatic vein. [WP,unvetted]. see also MA:0002165 ! lieno-pancreatic vein @@ -60868,14 +60876,14 @@ pancreatic tributary of splenic vein - + - + FMA/obol @@ -60920,7 +60928,7 @@ - + @@ -60949,14 +60957,14 @@ http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + FMA/obol @@ -61002,7 +61010,7 @@ - + @@ -61021,7 +61029,7 @@ jejunal vein http://upload.wikimedia.org/wikipedia/commons/3/33/Gray591.png - + @@ -61034,7 +61042,7 @@ - + FMA/obol @@ -61081,7 +61089,7 @@ - + @@ -61100,14 +61108,14 @@ ileal vein - + - + FMA Wikipedia @@ -61292,9 +61300,9 @@ - - - + + + An abdominal muscle that inserts on the last rib and transverse processes of lumbar vertebrae. It is irregular and quadrilateral in shape, and broader below than above. EMAPA:18524 FMA:15569 @@ -61309,36 +61317,36 @@ quadratus lumborum http://upload.wikimedia.org/wikipedia/commons/d/de/Gray1124.png - + - + - + - + Last rib and transverse processes of lumbar vertebrae dbpedia - + Last rib and transverse processes of lumbar vertebrae dbpedia - + Last rib and transverse processes of lumbar vertebrae dbpedia @@ -61382,7 +61390,7 @@ - + The lateral abdominal wall muscle that is deep to the internal oblique. One of a pair of transverse abdominal muscles that is the anterolateral muscle of the abdomen, lying immediately under the internal abdominal oblique. [TFD][VHOG] @@ -61418,7 +61426,7 @@ transversus abdominis muscle http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg - + @@ -61431,7 +61439,7 @@ - + dbpedia @@ -61672,14 +61680,14 @@ - + - + @@ -61730,24 +61738,24 @@ renal pelvis https://upload.wikimedia.org/wikipedia/commons/c/c0/Illu_kidney2.jpg - + - + - + MA - + FMA @@ -61793,7 +61801,7 @@ - + @@ -61829,14 +61837,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-male-right/v1.3/assets/3d-vh-m-kidney-r.glb https://upload.wikimedia.org/wikipedia/commons/6/69/Illu_kidney.jpg - + - + FMA @@ -62027,7 +62035,7 @@ - + @@ -62074,14 +62082,14 @@ renal corpuscle https://upload.wikimedia.org/wikipedia/commons/2/22/Renal_corpuscle.svg - + - + MA ZFA @@ -62182,7 +62190,7 @@ - + @@ -62227,14 +62235,14 @@ glomerular capsule http://upload.wikimedia.org/wikipedia/commons/3/30/Gray1130.svg - + - + Wikipedia @@ -62333,11 +62341,11 @@ - + - - + + @@ -62375,7 +62383,7 @@ nephron tubule - + @@ -62384,18 +62392,18 @@ - + - + - + GO MA ZFA @@ -62409,13 +62417,13 @@ - + ZFA - + checkme @@ -62456,7 +62464,7 @@ - + @@ -62503,14 +62511,14 @@ collecting duct of renal tubule - + - + checkme GO @@ -62855,9 +62863,9 @@ - - - + + + @@ -62899,34 +62907,34 @@ adrenal medulla http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png - + - + - + - + FMA - + FMA - + Wikipedia @@ -63989,7 +63997,7 @@ - + @@ -64020,7 +64028,7 @@ interlobular bile duct - + @@ -64034,7 +64042,7 @@ - + FMA MA MP @@ -64079,7 +64087,7 @@ - + @@ -64113,14 +64121,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.2/assets/3d-vh-f-liver.glb https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb - + - + MA @@ -64255,8 +64263,8 @@ - - + + @@ -64292,25 +64300,25 @@ spleen lymphoid follicle - + - + - + CL:tm MA - + FMA @@ -64551,7 +64559,7 @@ - + An adventitia that is part of a ureter. EMAPA:28114 FMA:15892 @@ -64566,14 +64574,14 @@ UBERON:0001252 adventitia of ureter - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -64616,7 +64624,7 @@ - + A lamina propria that is part of a ureter [Automatically generated definition]. EMAPA:28841 @@ -64632,14 +64640,14 @@ lamina propria of ureter - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -64746,8 +64754,8 @@ - - + + Distensible musculomembranous organ situated in the anterior part of the pelvic cavity in which urine collects before excretion[MP]. @@ -64793,11 +64801,11 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/urinary-bladder-male/v1.2/assets/3d-vh-m-urinary-bladder.glb https://upload.wikimedia.org/wikipedia/commons/3/30/Urinary_system.svg - + - + @@ -64810,13 +64818,13 @@ - + FMA - + upper part of UG sinus @@ -65306,7 +65314,7 @@ - + A serous membrane that is part of a urinary bladder [Automatically generated definition]. TODO - check serosa/peritoneum EMAPA:28661 @@ -65328,14 +65336,14 @@ UBERON:0001260 serosa of urinary bladder - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -65620,7 +65628,7 @@ - + @@ -65651,14 +65659,14 @@ pancreatic acinus - + - + FMA @@ -65706,7 +65714,7 @@ - + An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones[GO]. @@ -65752,14 +65760,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb https://upload.wikimedia.org/wikipedia/commons/7/7e/Blausen_0699_PancreasAnatomy2.png - + - + Wikipedia @@ -65823,7 +65831,7 @@ - + A trabecula that is part of a spleen. EMAPA:35808 @@ -65840,14 +65848,14 @@ trabecula of spleen - + - + FMA @@ -65875,7 +65883,7 @@ - + A structure found in the red pulp of the spleen between the sinusoids, consisting of fibrils and connective tissue cells with a large population of monocytes and macrophages. These cords contain half of the human body's monocytes as a reserve so that after tissue injury these monocytes can move in and aid locally sourced monocytes in wound healing. Erythrocytes pass through the cords of Billroth before entering the sinusoids. The passage into the sinusoids may be seen as a bottleneck, where erythrocytes need to be flexible in order to pass through. In disorders of erythrocyte shape and/or flexibility, such as hereditary spherocytosis, erythrocytes fail to pass through and get phagocytosed, causing extravascular hemolysis. EMAPA:37752 @@ -65890,14 +65898,14 @@ splenic cord - + - + MA @@ -66048,8 +66056,8 @@ - - + + The acetabulum is a concave surface of the pelvis. The head of the femur meets with the pelvis at the acetabulum, forming the hip joint. There are three bones of the os coxae (hip bone) that come together to form the acetabulum. Contributing a little more than two-fifths of the structure is the ischium, which provides lower and side boundaries to the acetabulum. The ilium forms the upper boundary, providing a little less than two-fifths of the structure of the acetabulum. The rest is formed by the pubis, near the midline. It is bounded by a prominent uneven rim, which is thick and strong above, and serves for the attachment of the acetabular labrum, which reduces its opening, and deepens the surface for formation of the hip joint. At the lower part of the acetabulum is the acetabular notch, which is continuous with a circular depression, the acetabular fossa, at the bottom of the cavity of the acetabulum. The rest of the acetabulum is formed by a curved, crescent-moon shaped surface, the lunate surface, where the joint is made with the head of the femur. Its counterpart in the pectoral girdle is the glenoid fossa.[WP,unvetted]. Cavity for the articulation of the proximal bone of the hind limb.[AAO] During the transformation from the osteolepiform fins to tetrapod limbs, the appendages and girdles underwent a number of radical changes. The pelvic girdle became a weight-bearing structure by evolution of an ischium, a full mesio-ventral contact between the two sides of the girdle, an ilium, and a contact between the vertebral column and the girdle through a sacral rib. Fore- and hindlimbs shifted laterally by reorientation of the glenoid and the acetabulum.[well established][VHOG] @@ -66076,11 +66084,11 @@ acetabular part of hip bone http://upload.wikimedia.org/wikipedia/commons/2/29/Illu_pelvic_girdle.jpg - + - + @@ -66093,13 +66101,13 @@ - + Phenoscape - + FMA @@ -66320,7 +66328,7 @@ - + @@ -66352,7 +66360,7 @@ innominate bone http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png - + @@ -66365,7 +66373,7 @@ - + FMA @@ -66460,14 +66468,14 @@ - + - + @@ -66510,24 +66518,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-male/v1.3/assets/3d-vh-m-pelvis.glb - + - + - + FMA - + cjm @@ -66625,7 +66633,7 @@ - + @@ -66659,7 +66667,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-male/v1.3/assets/3d-vh-m-pelvis.glb - + @@ -66684,7 +66692,7 @@ - + cjm @@ -66752,7 +66760,7 @@ - + @@ -66796,7 +66804,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-male/v1.3/assets/3d-vh-m-pelvis.glb - + @@ -66821,7 +66829,7 @@ - + FMA @@ -67270,7 +67278,7 @@ - + @@ -67299,14 +67307,14 @@ liver parenchyma - + - + XAO @@ -67374,7 +67382,7 @@ - + @@ -67423,14 +67431,14 @@ hepatic sinusoid - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -67495,8 +67503,8 @@ - - + + @@ -67538,11 +67546,11 @@ intralobular bile duct - + - + @@ -67555,13 +67563,13 @@ - + FMA - + FMA @@ -67623,9 +67631,9 @@ - - - + + + @@ -67656,15 +67664,15 @@ bile canaliculus http://upload.wikimedia.org/wikipedia/commons/d/d9/Gray1094.png - + - + - + @@ -67678,19 +67686,19 @@ - + BTO - + FMA - + FMA @@ -67824,14 +67832,14 @@ - + - + The basic functional unit of the kidney. its chief function is to regulate the concentration of water and soluble substances like sodium salts by filtering the blood, reabsorbing what is needed and excreting the rest as urine. A nephron eliminates wastes from the body, regulates blood volume and blood pressure, controls levels of electrolytes and metabolites, and regulates blood pH. Its functions are vital to life and are regulated by the endocrine system by hormones such as antidiuretic hormone, aldosterone, and parathyroid hormone.[WP]. kidney terms require review for cross-vertebrate compatibility and developmental relationships. @@ -67863,24 +67871,24 @@ nephron http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + - + FMA - + Bgee:AN @@ -68063,15 +68071,15 @@ - - + + - + @@ -68107,15 +68115,15 @@ proximal convoluted tubule http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + - + @@ -68128,20 +68136,20 @@ - + MA uses subclass GOC:mtg_kidney_jan10 - + GO - + Wikipedia @@ -68306,7 +68314,7 @@ - + @@ -68332,7 +68340,7 @@ descending limb of loop of Henle http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + @@ -68345,7 +68353,7 @@ - + FMA @@ -68369,9 +68377,9 @@ - - - + + + @@ -68410,15 +68418,15 @@ proximal straight tubule - + - + - + @@ -68431,20 +68439,20 @@ - + MA - + MA uses subclass GOC:mtg_kidney_jan10 - + MA @@ -68591,7 +68599,7 @@ - + @@ -68628,7 +68636,7 @@ distal convoluted tubule https://upload.wikimedia.org/wikipedia/commons/2/21/Kidney_nephron.png - + @@ -68641,7 +68649,7 @@ - + EMAPA GO MA-modified-from-isa @@ -68768,7 +68776,7 @@ - + @@ -68796,14 +68804,14 @@ inner medulla of kidney - + - + GO:0072053 @@ -68864,7 +68872,7 @@ - + @@ -68907,14 +68915,14 @@ endometrium https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg - + - + FMA @@ -68990,7 +68998,7 @@ - + @@ -69039,14 +69047,14 @@ myometrium https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg - + - + FMA @@ -69115,7 +69123,7 @@ - + Outer serosa layer of the uterus. TODO - check for parallel structure with peritoneum EMAPA:37792 @@ -69138,14 +69146,14 @@ serosa of uterus https://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cervix.jpg - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -69205,8 +69213,8 @@ - - + + The psoas major is a long fusiform muscle placed on the side of the lumbar region of the vertebral column and brim of the lesser pelvis. It joins the iliacus muscle to form the iliopsoas. In less than 50 per cent of subjects the psoas major is accompanied by the psoas minor. [WP,unvetted]. BTO:0001877 @@ -69225,11 +69233,11 @@ psoas major muscle http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + @@ -69242,14 +69250,14 @@ - + Transverse processes of T12-L5 and the lateral aspects of the discs between them dbpedia - + in the lesser trochanter of the femur dbpedia @@ -69308,7 +69316,7 @@ - + @@ -69337,14 +69345,14 @@ http://upload.wikimedia.org/wikipedia/commons/1/13/Anteriorglanspenis.jpg https://upload.wikimedia.org/wikipedia/commons/3/35/Male_anatomy.png - + - + Bgee:AN @@ -69399,7 +69407,7 @@ - + The external sac of skin that encloses the testes. It is an extension of the abdomen, and in placentals is located between the penis and anus. scrotal In elephants the testes remain in the abdomen @@ -69427,14 +69435,14 @@ http://upload.wikimedia.org/wikipedia/commons/a/a6/Scrotum_warm_and_cold.jpg http://upload.wikimedia.org/wikipedia/en/thumb/3/3e/HairedHumanScrotum.png/200px-HairedHumanScrotum.png - + - + Wikipedia @@ -69494,8 +69502,8 @@ - - + + @@ -69549,24 +69557,24 @@ epididymis http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_testis_surface.jpg - + - + - + FMA - + Wikipedia @@ -69813,7 +69821,7 @@ - + A spherical aggregation of cells in the ovary that contains a single oocyte[WP,modified]. TODO - align subtypes based on staging, which is taxon-specific @@ -69851,14 +69859,14 @@ http://upload.wikimedia.org/wikipedia/commons/c/ca/Human_ovarian_follicle.jpg https://upload.wikimedia.org/wikipedia/commons/e/e6/Primary_follicle-4.JPG - + - + Wikipedia @@ -70788,7 +70796,7 @@ - + One the veins that drains the vaginal venous plexus, into the hypogastric veins. [WP,modified]. EMAPA:37796 @@ -70803,14 +70811,14 @@ vaginal vein http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray589.png - + - + FMA/obol @@ -70850,7 +70858,7 @@ - + @@ -70874,14 +70882,14 @@ iliolumbar vein http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png - + - + FMA/obol @@ -70916,7 +70924,7 @@ - + The obturator vein begins in the upper portion of the adductor region of the thigh and enters the pelvis through the upper part of the obturator foramen, in the obturator canal. It runs backward and upward on the lateral wall of the pelvis below the obturator artery, and then passes between the ureter and the hypogastric artery, to end in the hypogastric vein. It has an anterior and posterior branch (similar to obturator artery). [WP,unvetted]. EMAPA:37677 @@ -70932,14 +70940,14 @@ obturator vein http://upload.wikimedia.org/wikipedia/commons/b/bd/Gray585.png - + - + FMA/obol @@ -71062,7 +71070,7 @@ - + The tibial nerve is a branch of the sciatic nerve. The tibial nerve passes through the popliteal fossa to pass below the arch of soleus. In the popliteal fossa the nerve gives off branches to gastrocnemius, popliteus, soleus and plantaris muscles, an articular branch to the knee joint, and a cutaneous branch that will become the sural nerve. The sural nerve is joined by fibres from the common peroneal nerve and runs down the calf to supply the lateral side of the foot. Below the soleus muscle the nerve lies close to the tibia and supplies the tibialis posterior, the flexor digitorum longus and the flexor hallucis longus. The nerve passes into the foot running posterior to the medial malleolus. Here it is bound down by the flexor retinaculum in company with the posterior tibial artery. [WP,unvetted]. EMAPA:36512 @@ -71081,14 +71089,14 @@ tibial nerve http://upload.wikimedia.org/wikipedia/commons/1/1a/Gray828.png - + - + FMA WP @@ -71214,7 +71222,7 @@ - + Muscle (organ) which is a part of the pelvis. Examples: levator ani,. @@ -71230,7 +71238,7 @@ muscle of pelvis - + @@ -71242,7 +71250,7 @@ - + FMAdef @@ -71288,7 +71296,7 @@ - + The Levator ani is a broad, thin muscle, situated on the side of the pelvis. It is attached to the inner surface of the side of the lesser pelvis, and unites with its fellow of the opposite side to form the greater part of the floor of the pelvic cavity. It supports the viscera in pelvic cavity, and surrounds the various structures which pass through it. In combination with the Coccygeus muscle, it forms the pelvic diaphragm. [WP,unvetted]. the levator ani muscle acts to lower the tail, in animals that have one EMAPA:19165 @@ -71305,14 +71313,14 @@ levator ani muscle http://upload.wikimedia.org/wikipedia/commons/6/63/Gray404.png - + - + inner surface of the side of the lesser pelvis dbpedia @@ -71355,8 +71363,8 @@ - - + + The Coccygeus is a muscle of the pelvic wall (i.e. peripheral to the pelvic floor), situated behind the levator ani and in front of the sacrospinous ligament. It is a triangular plane of muscular and tendinous fibers, arising by its apex from the spine of the ischium and sacrospinous ligament, and inserted by its base into the margin of the coccyx and into the side of the lowest piece of the sacrum. It assists the Levator ani and Piriformis in closing in the back part of the outlet of the pelvis. [WP,unvetted]. EMAPA:37482 @@ -71374,25 +71382,25 @@ coccygeus muscle http://upload.wikimedia.org/wikipedia/commons/6/63/Gray404.png - + - + - + sacral nerves: S4 S5 or S3-S4 dbpedia - + Sacrospinous ligament and ischial spine dbpedia @@ -71930,8 +71938,8 @@ - - + + @@ -71958,25 +71966,25 @@ prostatic urethra http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png - + - + - + FMA MA - + FMA @@ -72079,8 +72087,8 @@ - - + + @@ -72115,24 +72123,24 @@ spongiose part of urethra http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png - + - + - + FMA - + FMA @@ -72381,8 +72389,8 @@ - - + + @@ -72407,24 +72415,24 @@ dorsal artery of penis http://upload.wikimedia.org/wikipedia/commons/f/f6/Gray1155.png - + - + - + BTO - + FMA @@ -72628,7 +72636,7 @@ - + @@ -72672,14 +72680,14 @@ http://upload.wikimedia.org/wikipedia/commons/4/49/Seminiferous_tubule_and_sperm_low_mag.jpg http://upload.wikimedia.org/wikipedia/commons/6/6a/Gray1145.png - + - + Wikipedia @@ -72852,7 +72860,7 @@ - + A membrane that surrounds or partially covers the vaginal opening. hymen EMAPA:37795 @@ -72872,14 +72880,14 @@ vaginal hymen http://upload.wikimedia.org/wikipedia/commons/2/26/Gray1229.png - + - + FMA @@ -73138,7 +73146,10 @@ - + + + + @@ -73149,7 +73160,12 @@ - + + + + + + @@ -73196,22 +73212,12 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-male/v1.3/assets/3d-vh-m-pelvis.glb - - - - FMA - - - - - FMA - @@ -73355,15 +73361,15 @@ - - + + - + A tube running from the outer ear to the middle ear. The human ear canal extends from the pinna to the eardrum and is about 26 mm in length and 7 mm in diameter. consider revisiting superclass after refinement of CARO/EAO, conduit may not be quite correct. tympanic ring, which serves as support for the tympanic membrane, directs invagination of the first pharingeal cleft ectoderm to form the external acoustic meatus (EAM), which provides the outer layer of the membrane[PMID 11237469] @@ -73394,34 +73400,34 @@ external acoustic meatus - + - + - + - + FMA - + PMID:11237469 - + EHDAA2 @@ -73479,7 +73485,7 @@ - + The anus and surrounding regions. Encompasses both internal and external regions, where present. Although all vertebrates have a digestive tract and accessory glands, various parts of this system are not necessarily homologous, analogous, or even present in all species. Therefore, broad comparisons can be best made under the listings of headgut, foregut, midgut, pancreas and biliary system, hindgut.[uncertain][VHOG] EFO:0000847 @@ -73504,14 +73510,14 @@ https://github.com/obophenotype/uberon/issues/507 http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray408.png - + - + cjm @@ -73693,7 +73699,7 @@ - + @@ -73715,14 +73721,14 @@ medial circumflex femoral artery http://upload.wikimedia.org/wikipedia/commons/c/c5/Circumflex_femoral_arteries.png - + - + FMA @@ -73753,8 +73759,8 @@ - - + + @@ -73790,24 +73796,24 @@ inferior rectal artery http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray542.png - + - + - + FMA-abduced-lr - + FMA-abduced-lr @@ -73885,7 +73891,7 @@ - + The perineal artery (superficial perineal artery) arises from the internal pudendal artery, and turns upward, crossing either over or under the Transversus perinæi superficialis, and runs forward, parallel to the pubic arch, in the interspace between the Bulbocavernosus and Ischiocavernosus, both of which it supplies, and finally divides into several posterior scrotal branches which are distributed to the skin and dartos tunic of the scrotum. As it crosses the Transversus perinæi superficialis it gives off the transverse perineal artery which runs transversely on the cutaneous surface of the muscle, and anastomoses with the corresponding vessel of the opposite side and with the perineal and inferior hemorrhoidal arteries. It supplies the Transversus perinæi superficialis and the structures between the anus and the urethral bulb. [WP,unvetted]. EMAPA:37107 @@ -73903,14 +73909,14 @@ perineal artery http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray542.png - + - + FMA @@ -73951,8 +73957,8 @@ - - + + @@ -73994,11 +74000,11 @@ cerebrospinal fluid - + - + @@ -74011,13 +74017,13 @@ - + EHDAA2 - + see notes EHDAA2 @@ -74202,7 +74208,7 @@ - + EMAPA:37179 FMA:21246 @@ -74212,14 +74218,14 @@ perineal vein - + - + FMA/obol @@ -74235,7 +74241,7 @@ - + The great saphenous vein (GSV), also greater saphenous vein, is the large (subcutaneous) superficial vein of the leg and thigh. The terms 'safaina' (Greek) and 'el safin' (Arabic) have both been claimed as the origin for the word 'saphenous'. [WP,unvetted]. BTO:0003271 @@ -74258,14 +74264,14 @@ great saphenous vein http://upload.wikimedia.org/wikipedia/commons/5/51/Great_saphenous_vein.png - + - + FMA/obol @@ -74547,9 +74553,9 @@ - - - + + + An adductor muscle that attaches to the femur and the pelvis. In humans, the obturator externus muscle is a flat, triangular muscle, which covers the outer surface of the anterior wall of the pelvis. It is sometimes considered part of the medial compartment of thigh, and sometimes considered part of the gluteal region. [WP,generalized]. Originates on the ventro-lateral pelvic rim and inserts on the ventral aspect of the femur, medial to the insertion of the pectineus.[AAO] the definition generalized to accommodate the AAO class - 'Originates on the ventro-lateral pelvic rim and inserts on the ventral aspect of the femur, medial to the insertion of the pectineus.' [AAO:0010043] @@ -74575,15 +74581,15 @@ obturator externus http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG - + - + - + @@ -74602,20 +74608,20 @@ - + FMA - + obturator foramen and obturatory membrane dbpedia - + trochanteric fossa of femur dbpedia @@ -74702,10 +74708,10 @@ - - - - + + + + The iliacus is a flat, triangular muscle, which fills the iliac fossa. [WP,unvetted]. AAO has iliacus major and minor, both of which attach to ilium and femur - consider grouping these somehow @@ -74726,19 +74732,19 @@ iliacus muscle http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + - + - + @@ -74751,26 +74757,26 @@ - + dbpedia - + dbpedia - + lesser trochanter of femur dbpedia - + dbpedia @@ -74818,10 +74824,10 @@ - - - - + + + + The largest and most superficial of the three gluteal muscles [WP,unvetted]. In humans, it makes up a large portion of the shape and appearance of the buttocks. It is a broad and thick fleshy mass of a quadrilateral shape, and forms the prominence of the nates. Its large size is one of the most characteristic features of the muscular system in humans, connected as it is with the power of maintaining the trunk in the erect posture. The muscle is remarkably coarse in structure, being made up of fasciculi lying parallel with one another and collected together into large bundles separated by fibrous septa. @@ -74844,45 +74850,45 @@ gluteus maximus http://upload.wikimedia.org/wikipedia/commons/7/70/Posterior_Hip_Muscles_3.PNG - + - + - + - + - + Gluteal surface of ilium lumbar fascia sacrum sacrotuberous ligament dbpedia - + dbpedia - + dbpedia - + dbpedia @@ -74923,8 +74929,8 @@ - - + + One of three gluteal muscles, is a broad, thick, radiating muscle, situated on the outer surface of the pelvis. Its posterior third is covered by the gluteus maximus, its anterior two-thirds by the gluteal aponeurosis, which separates it from the superficial fascia and integument. [WP,unvetted]. A&P heads in rat, single head in humans[DOI:10.1002/ar.22919] EMAPA:19163 @@ -74942,25 +74948,25 @@ gluteus medius http://upload.wikimedia.org/wikipedia/commons/7/70/Posterior_Hip_Muscles_3.PNG - + - + - + Gluteal surface of ilium under gluteus maximus dbpedia - + Greater trochanter of the femur dbpedia @@ -74996,8 +75002,8 @@ - - + + The psoas minor is a long, slender skeletal muscle that, when present, is placed in front of the psoas major muscle. [WP,unvetted]. BTO:0001878 @@ -75017,11 +75023,11 @@ psoas minor muscle http://upload.wikimedia.org/wikipedia/commons/b/b2/Gray430.png - + - + @@ -75034,14 +75040,14 @@ - + Lateral surface bodies of T12 and L1 vertebrae and intervening intervertebral disc dbpedia - + pectineal line dbpedia @@ -75077,7 +75083,7 @@ - + @@ -75090,7 +75096,7 @@ - + The Sartorius muscle - the longest muscle in the human body - is a long thin muscle that runs down the length of the thigh. Its upper portion forms the lateral border of the femoral triangle. We do NOT group this AAO class here at this stage until further evidence of shared attachments @@ -75119,25 +75125,25 @@ sartorius muscle http://upload.wikimedia.org/wikipedia/commons/a/af/Sartorius.png - + - + - + femoral nerve dbpedia - + anteromedial surface of the upper tibia in the pes anserinus dbpedia @@ -75195,10 +75201,10 @@ - - - - + + + + The biceps femoris is a muscle of the posterior (the back) thigh. As its name implies, it has two parts, one of which (the long head) forms part of the hamstrings muscle group. [WP,unvetted]. BTO:0003418 @@ -75220,19 +75226,19 @@ biceps femoris http://upload.wikimedia.org/wikipedia/commons/b/bc/Biceps_femoris_muscle_long_head.PNG - + - + - + - + @@ -75245,27 +75251,27 @@ - + long head: tibial nerveshort head: common peroneal nerve dbpedia - + dbpedia - + the head of the fibula which articulates with the back of the lateral tibial condyle dbpedia - + the head of the fibula which articulates with the back of the lateral tibial condyle dbpedia @@ -75301,7 +75307,7 @@ - + The semitendinosus is a muscle in the back of the thigh; it is one of the hamstrings. [WP,unvetted]. A&P heads in rat, single head in humans[DOI:10.1002/ar.22919] @@ -75322,7 +75328,7 @@ semitendinosus https://upload.wikimedia.org/wikipedia/commons/3/3f/Semitendinosus_muscle.PNG - + @@ -75335,7 +75341,7 @@ - + dbpedia @@ -75440,9 +75446,9 @@ - - - + + + One of the muscles belong to the group consisting of the rectus femoris and the three heads of the vastus (lateralis, medialis, intermedius). The quadriceps is a collective term for the rectus femoris and the three heads of the vastus (lateralis, medialis, intermedius). [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Kardong_KV, Vertebrates:_Comparative_Anatomy, p.391][VHOG] @@ -75475,35 +75481,35 @@ quadriceps femoris http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg - + - + - + - + dbpedia - + combined rectus femoris and vastus muscles dbpedia - + tibial tuberosity dbpedia @@ -75573,9 +75579,9 @@ - - - + + + The Rectus femoris muscle is one of the four quadriceps muscles of the human body. (The others are the vastus medialis, the vastus intermedius, and the vastus lateralis. All four combine to form the quadriceps tendon, which inserts into the patella and continues as the patellar ligament. ) The Rectus femoris is situated in the middle of the front of the thigh; it is fusiform in shape, and its superficial fibers are arranged in a bipenniform manner, the deep fibers running straight down to the deep aponeurosis. [WP,unvetted]. BTO:0001564 @@ -75593,35 +75599,35 @@ rectus femoris https://upload.wikimedia.org/wikipedia/commons/1/14/Rectus_femoris.png - + - + - + - + ISBN:0073040584 - + anterior inferior iliac spine and the exterior surface of the bony ridge which forms the iliac portion of the acetabulum dbpedia - + dbpedia @@ -75643,7 +75649,7 @@ - + The Vastus lateralis (Vastus externus) is the largest part of the Quadriceps femoris. It arises by a broad aponeurosis, which is attached to the upper part of the intertrochanteric line, to the anterior and inferior borders of the greater trochanter, to the lateral lip of the gluteal tuberosity, and to the upper half of the lateral lip of the linea aspera; this aponeurosis covers the upper three-fourths of the muscle, and from its deep surface many fibers take origin. A few additional fibers arise from the tendon of the Glutæus maximus, and from the lateral intermuscular septum between the Vastus lateralis and short head of the Biceps femoris. The fibers form a large fleshy mass, which is attached to a strong aponeurosis, placed on the deep surface of the lower part of the muscle: this aponeurosis becomes contracted and thickened into a flat tendon inserted into the lateral border of the patella, blending with the Quadriceps femoris tendon, and giving an expansion to the capsule of the knee-joint. [WP,unvetted]. lateralis @@ -75665,14 +75671,14 @@ vastus lateralis http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg - + - + ISBN:0073040584 @@ -75700,9 +75706,9 @@ - - - + + + The vastus medialis, often called the 'teardrop' muscle, is a medially located muscle of the quadriceps. [WP,unvetted]. medialis @@ -75721,34 +75727,34 @@ vastus medialis https://upload.wikimedia.org/wikipedia/commons/0/05/Illu_lower_extremity_muscles.jpg - + - + - + - + ISBN:0073040584 - + dbpedia - + dbpedia @@ -75827,9 +75833,9 @@ - - - + + + An adductor muscle that attaches to the pelvic bone and the femur. In humans, The pectineus muscle is a flat, quadrangular muscle, situated at the anterior part of the upper and medial aspect of the thigh. It can be classified in the medial compartment of thigh (when the function is emphasized) or the anterior compartment of thigh (when the nerve is emphasized). [WP,generalized]. Originates on the lateral border of the ilium and the anterior margin of the pubis. It inserts on the ventral surface of the femoral shaft.[AAO] @@ -75851,15 +75857,15 @@ pectineus muscle http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + - + @@ -75872,21 +75878,21 @@ - + Femoral nerve sometimes obturator nerve dbpedia - + pectineal line - superior pubic ramus dbpedia - + dbpedia @@ -75947,7 +75953,7 @@ - + A muscle that is part of the region of the hindlimb between the pelvis and ankle. see notes on UBERON:0000978 for possible confusion over the term 'leg'. @@ -75973,14 +75979,14 @@ muscle of leg - + - + prolog @@ -76048,7 +76054,7 @@ - + @@ -76101,14 +76107,14 @@ primary motor cortex http://upload.wikimedia.org/wikipedia/commons/e/eb/Ba4.png - + - + MA Wikipedia @@ -76202,11 +76208,11 @@ - - - - - + + + + + A muscle that originates in the upper two-thirds of the lateral surface of the tibia and inserts into the medial cuneiform and first metatarsal bones of the foot. Its acts to invert the foot. It is situated on the lateral side of the tibia; it is thick and fleshy above, tendinous below. This muscle overlaps the anterior tibial vessels and deep peroneal nerve in the upper part of the leg. [WP,unvetted]. The M. tibialis cranialis is a muscle that flexes the tarsometatarsus. It originates on the craniodistal aspect of the femur and proximal tibiotarsus and inserts on the cranial surface of the tarsometarsus[EvoWiki]. BTO:0001382 EFO:0001385 @@ -76231,56 +76237,56 @@ tibialis anterior http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray1240.png - + - + - + - + - + - + medial cuneiform and first metatarsal bones of the foot dbpedia - + medial cuneiform and first metatarsal bones of the foot dbpedia - + dbpedia - + dbpedia - + dbpedia @@ -76335,11 +76341,11 @@ - - - - - + + + + + A penniform muscle of the lateral front part of the hindlimb responsible for extension of the digits and dorsiflexion of the ankle. BTO:0000436 @@ -76360,23 +76366,23 @@ extensor digitorum longus http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1241.png - + - + - + - + - + @@ -76389,34 +76395,34 @@ - + dbpedia - + Anterior lateral condyle of tibia anterior shaft of fibula and superior of interosseous membrane dbpedia - + Anterior lateral condyle of tibia anterior shaft of fibula and superior of interosseous membrane dbpedia - + Anterior lateral condyle of tibia anterior shaft of fibula and superior of interosseous membrane dbpedia - + Dorsal surface; middle and distal phalanges of lateral four digits dbpedia @@ -76458,8 +76464,8 @@ - - + + A superficial muscle in the lateral compartment of the leg, and acts to evert and plantar flex the ankle. It is situated at the upper part of the lateral side of the leg, and is the most superficial of the three peroneus muscles. It is innervated by the superficial fibular nerve (superficial peroneal nerve). [WP,unvetted]. EMAPA:36253 FMA:22539 @@ -76484,24 +76490,24 @@ fibularis longus http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray1240.png - + - + - + dbpedia - + dbpedia @@ -76567,24 +76573,24 @@ - - + + - - - + + + - + The most superficial muscle of the triceps surae group, in the posterior portion of the lower hindleg. The most superficial calf muscle in the posterior part of the leg. [TFD][VHOG] @@ -76616,68 +76622,68 @@ gastrocnemius http://upload.wikimedia.org/wikipedia/commons/8/8e/Gastrocnemius.png - + - + - + - + - + - + - + FMA - + tibial nerve from the sciatic specifically nerve roots dbpedia - + superior to articular surfaces of lateral condyle of femur and medial condyle of femur dbpedia - + tendo calcaneus into mid-posteior calcaneus dbpedia - + tendo calcaneus into mid-posteior calcaneus dbpedia - + dbpedia @@ -76734,17 +76740,17 @@ - - - - + + + + - + A deep muscle of the triceps surae group, in the superficial posterior compartment of the leg. @@ -76769,56 +76775,56 @@ soleus muscle http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg - + - + - + - + - + - + FMA - + tibial nerve specifically nerve roots dbpedia - + fibula medial border of tibia dbpedia - + dbpedia - + dbpedia @@ -76905,9 +76911,9 @@ - - - + + + The popliteus muscle in the leg is used to unlock the knee by laterally rotating the femur on the tibia during a closed chain movement (such as one with the foot in contact with the ground). [WP,unvetted]. EMAPA:36240 @@ -76929,35 +76935,35 @@ popliteus muscle http://upload.wikimedia.org/wikipedia/commons/c/c1/Gray439.png - + - + - + - + dbpedia - + posterior-medial tibia under the tibial condyles dbpedia - + middle facet of the lateral surface of the lateral femoral condyle dbpedia @@ -77001,9 +77007,9 @@ - - - + + + A deep muscle of the posterior compartment of the hindlimb that is innervated by the tibial nerve, arises from the fibula and insets in the distal phalanx of pedal digit 1. EMAPA:37588 @@ -77020,36 +77026,36 @@ flexor hallucis longus http://upload.wikimedia.org/wikipedia/commons/9/92/Gray442.png - + - + - + - + tibial nerve S1 and S2 nerve roots dbpedia - + fibula posterior aspect of middle 1/3 dbpedia - + Plantar surface; base of distal phalanx of hallux dbpedia @@ -77090,8 +77096,8 @@ - - + + @@ -77132,24 +77138,24 @@ auditory cortex http://upload.wikimedia.org/wikipedia/commons/8/81/Brodmann_41_42.png - + - + - + MA - + Wikipedia @@ -77836,7 +77842,7 @@ - + A longissimus muscle that lies medial to the longissimus cervicis, between it and the semispinalis capitis. It arises by tendons from the transverse processes of the upper four or five thoracic vertebrae, and the articular processes of the lower three or four cervical vertebrae, and is inserted into the posterior margin of the mastoid process, beneath the splenius capitis and sternocleidomastoid.[WP,unvetted]. BTO:0001649 EMAPA:37650 @@ -77853,14 +77859,14 @@ longissimus capitis http://upload.wikimedia.org/wikipedia/commons/1/1f/Longissimus.png - + - + Wikipedia:Mastoid_process @@ -78095,8 +78101,8 @@ - - + + The Semispinalis dorsi (or semispinalis thoracis) consists of thin, narrow, fleshy fasciculi, interposed between tendons of considerable length. It arises by a series of small tendons from the transverse processes of the sixth to the tenth thoracic vertebræ, and is inserted, by tendons, into the spinous processes of the upper four thoracic and lower two cervical vertebrae. [WP,unvetted]. EMAPA:37696 FMA:22828 @@ -78114,11 +78120,11 @@ semispinalis thoracis http://upload.wikimedia.org/wikipedia/commons/6/65/Semispinalis.png - + - + @@ -78131,14 +78137,14 @@ - + transverse processes of the sixth to the tenth thoracic vertebre dbpedia - + spinous processes of the upper four thoracic and lower two cervical vertebrae dbpedia @@ -78193,8 +78199,8 @@ - - + + The semispinalis cervicis (semispinalis colli), thicker than the semispinalis dorsi, arises by a series of tendinous and fleshy fibers from the transverse processes of the upper five or six thoracic vertebræ, and is inserted into the cervical spinous processes, from the axis to the fifth inclusive. The fasciculus connected with the axis is the largest, and is chiefly muscular in structure. [WP,unvetted]. EMAPA:37695 FMA:22829 @@ -78209,11 +78215,11 @@ semispinalis cervicis http://upload.wikimedia.org/wikipedia/commons/7/7f/Gray384.png - + - + @@ -78226,14 +78232,14 @@ - + transverse processes of the upper five or six thoracic vertebrae dbpedia - + cervical spinous processes from the axis to the fifth dbpedia @@ -78269,7 +78275,7 @@ - + The Semispinalis capitis (Complexus) is situated at the upper and back part of the neck, deep to the Splenius, and medial to the Longissimus cervicis and capitis. It arises by a series of tendons from the tips of the transverse processes of the upper six or seven thoracic and the seventh cervical vertebræ, and from the articular processes of the three cervical above this. The tendons, uniting, form a broad muscle, which passes upward, and is inserted between the superior and inferior nuchal lines of the occipital bone. The medial part, usually more or less distinct from the remainder of the muscle, is frequently termed the Spinalis capitis; it is also named the Biventer cervicis since it is traversed by an imperfect tendinous inscription. [WP,unvetted]. EMAPA:37694 FMA:22830 @@ -78289,7 +78295,7 @@ semispinalis capitis http://upload.wikimedia.org/wikipedia/commons/7/7f/Gray384.png - + @@ -78302,7 +78308,7 @@ - + Transversal process of lower cervical and higher thoracal columna dbpedia @@ -78422,8 +78428,8 @@ - - + + @@ -78449,24 +78455,24 @@ basilic vein http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png - + - + - + FMA/obol - + FMA/obol @@ -78538,8 +78544,8 @@ - - + + A vein that accompanies the brachial artery between the shoulder and the elbow. Vein which collects blood from the forelimb and drains into the subclavian vein.[AAO] @@ -78558,24 +78564,24 @@ brachial vein http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png - + - + - + FMA/obol - + FMA/obol @@ -78612,7 +78618,7 @@ - + A vein between the biceps and pronator radii teres muscles that unites with the common ulnar vein to form the basilic vein within the forearm. Merged median cubital and basilic veins on basis of wikipedia synonym - needs verificied @@ -78634,14 +78640,14 @@ median basilic vein http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray574.png - + - + FMA/obol @@ -79027,8 +79033,8 @@ - - + + A vein formed by the confluence of the thoracodorsal and circumflex scapular veins and accompanying the subscapular artery to drain into the axillary vein. EMAPA:37190 @@ -79039,24 +79045,24 @@ subscapular vein - + - + - + FMA/obol - + FMA/obol @@ -79296,7 +79302,7 @@ - + The major preaxial endochondral bone in the anterior zeugopod[Phenoscape]. One of the two long bones of endochondral origin of the fore-epipodium; it is located on the lateral side of the ulna. Its upper end articulates with both the humerus and the ulna, whereas the lower articulates with the carpals.[AAO] @@ -79321,14 +79327,14 @@ Due to the presence of the radius in Tetrpodomorph fish this element is not inherently linked to the presence of digits or flexor musculature. The corresponding bone in the posterior fin/limb is the tibia.[Phenoscape]. In four-legged animals, the radius is the main load-bearing bone of the lower forelimb. Its structure is similar in most terrestrial tetrapods, but it may be fused with the ulna in some mammals (such as horses) and reduced or modified in animals with flippers or vestigial forelimbs [ISBN:0-03-910284-X] radius bone - + - + definitional @@ -79384,7 +79390,7 @@ - + The major postaxial endochondral bone in the anterior zeugopod[Phenoscape]. One of the two long bones of endochondral origin of the fore-epipodium; it is located on the medial (inner) side of the radius. The upper end of the ulna articulates with the lower end of the humerus forming a strong hinge joint with the carpals, whereas the lower articulates with the carpals.[AAO] @@ -79409,14 +79415,14 @@ ulna http://upload.wikimedia.org/wikipedia/commons/6/67/Illu_upper_extremity.jpg - + - + definitional @@ -81238,7 +81244,7 @@ - + @@ -81272,14 +81278,14 @@ here 'manus' includes both the wrist region, metatarsal region and acropodial region skeleton of manus - + - + EHDAA2 @@ -81355,7 +81361,7 @@ - + Subdivision of trunk proper, which is demarcated from the neck by the plane of the superior thoracic aperture and from the abdomen internally by the inferior surface of the diaphragm and externally by the costal margin and associated with the thoracic vertebral column and ribcage and from the back of the thorax by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines; together with the abdomen and the perineum, it constitutes the trunk proper[FMA]. FMA:24216 present in FMA1, but gone in subsequent versions @@ -81392,7 +81398,7 @@ chest http://upload.wikimedia.org/wikipedia/commons/d/db/Chest.jpg - + @@ -81405,7 +81411,7 @@ - + FMA MA @@ -81497,7 +81503,7 @@ - + @@ -81525,14 +81531,14 @@ here 'pes' includes both the ankle region, metatarsals and acropodial region skeleton of pes - + - + EHDAA2 @@ -82173,7 +82179,7 @@ - + @@ -82212,14 +82218,14 @@ navicular bone of pes http://upload.wikimedia.org/wikipedia/commons/8/81/Gray276.png - + - + numbers vary @@ -83372,7 +83378,7 @@ - + The elbow is the region surrounding the elbow-joint-the ginglymus or hinge joint in the middle of the arm. Three bones form the elbow joint: the humerus of the upper arm, and the paired radius and ulna of the forearm. The bony prominence at the very tip of the elbow is the olecranon process of the ulna, and the inner aspect of the elbow is called the antecubital fossa. [WP,unvetted,human-specific]. cubital Naming conventions for pod terms under discussion within phenoscape group @@ -83401,14 +83407,14 @@ elbow https://upload.wikimedia.org/wikipedia/commons/5/5c/Elbow_coude.JPG - + - + EHDAA2 @@ -83634,7 +83640,7 @@ - + The hip region is located lateral to the gluteal region (i.e. the buttock), inferior to the iliac crest, and overlying the greater trochanter of the thigh bone. In adults, three of the bones of the pelvis have fused into the hip bone which forms part of the hip region. The hip joint, scientifically referred to as the acetabulofemoral joint (art. coxae), is the joint between the femur and acetabulum of the pelvis and its primary function is to support the weight of the body in both static (e.g. standing) and dynamic (e.g. walking or running) postures. [WP,modified]. The pelvic girdle is never joined by contributions of dermal bone. From its first appearance in placoderms, the pelvic girdle is exclusively endoskeletal. It arose from pterygiophores, perhaps several times, in support of the fin.[well established][VHOG] coxal @@ -83666,14 +83672,14 @@ hip http://upload.wikimedia.org/wikipedia/commons/9/9f/Hip.jpg - + - + FMA-modified @@ -83784,7 +83790,7 @@ - + @@ -83824,14 +83830,14 @@ pedal digit http://upload.wikimedia.org/wikipedia/commons/5/5e/Toes.jpg - + - + PHENOSCAPE:ni @@ -83923,7 +83929,7 @@ - + A subdivision of the pectoral complex consisting of the structures in the region of the shoulder joint (which connects the humerus, scapula and clavicle). (...) endochondral elements of the early tetrapod shoulder develop from two centers of ossification, giving rise to a scapula and a 'coracoid'.[well established][VHOG] In FMA, the shoulder is part of the pectoral girdle region. in MA, shoulder structures like shoulder joints, bones, nerves etc are part of the shoulder and the forelimb. E.g. humerus is a shoulder bone @@ -83952,14 +83958,14 @@ shoulder http://upload.wikimedia.org/wikipedia/commons/9/90/Shoulderjoint.PNG - + - + FMA-modified @@ -84016,8 +84022,8 @@ - - + + The joint between adjacent vertebral bodies. May be composed of the nucleus pulposus, annular ligament, and the anterior and posterior longitudinal ligaments. FMA has 'intervertebral joint' as a GAT, and has two distinct classes 'intervertebral symphysis' and 'intervertebral syndesmosis', but note that the latter do not connect the centra vertebral joint @@ -84034,11 +84040,11 @@ UBERON:0001468 intervertebral joint - + - + @@ -84051,13 +84057,13 @@ - + FMA - + connects successive pairs of centra @@ -84106,14 +84112,30 @@ - - + + + + + + + + - - + + + + + + + + + + + + The sternoclavicular articulation is a double arthrodial joint composed of two portions separated by an articular disc. The parts entering into its formation are the sternal end of the clavicle, the upper and lateral part of the manubrium sterni, and the cartilage of the first rib, visible from the outside as the suprasternal notch. The articular surface of the clavicle is much larger than that of the sternum, and is invested with a layer of cartilage, which is considerably thicker than that on the latter bone. The ligaments of this joint are: Articular capsule Anterior sternoclavicular ligament Posterior sternoclavicular ligament Interclavicular ligament Costoclavicular ligament Articular disk [WP,unvetted]. sternoclavicular EMAPA:19203 @@ -84133,32 +84155,12 @@ sternoclavicular joint http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray325.png - - - - - - - - FMA - - - - - clavicular notch of the manubrium sterni - - - - - - sternal end of the clavicle and first rib - @@ -84564,12 +84566,20 @@ - + + + + - + + + + + + @@ -84619,16 +84629,6 @@ bone element - - - - - - - - - VSAO-modified - @@ -84753,20 +84753,20 @@ - - - + + + - - - - - + + + + + A muscle of shoulder which attaches to the scapula, clavicle and humerus.[FMA,generalized]. Muscle which originates as three heads, the pars externalis, pars clavicularis, and pars scapularis. The pars externalis originates from the lateral border of the omosternum and inserts on the distal portion of the humerus. The pars clavicularis originates from the ventro-lateral surface of the clavicle and inserts on the deltoid crest of the humerus. The pars scapularis originates from the lateral surface of the clavicle and inserts on the deltoid crest of the humerus.[AAO] @@ -84797,35 +84797,35 @@ deltoid http://upload.wikimedia.org/wikipedia/commons/9/93/Deltoideus.png - + - + - + - + - + - + - + - + @@ -84838,53 +84838,53 @@ - + EHDAA2 - + dbpedia - + EHDAA2 - + the anterior border and upper surface of the lateral third of the clavicle acromion spine of the scapula dbpedia - + the anterior border and upper surface of the lateral third of the clavicle acromion spine of the scapula dbpedia - + the anterior border and upper surface of the lateral third of the clavicle acromion spine of the scapula dbpedia - + deltoid tuberosity of humerus dbpedia - + dbpedia @@ -84961,9 +84961,9 @@ - - - + + + The infraspinatus muscle is a thick triangular muscle, which occupies the chief part of the infraspinatous fossa. The infraspinatus is a muscle of the rotator cuff. [WP,unvetted]. The pectoral muscles - the pectoralis major and pectoralis minor - evolved from a primitive muscle sheet that connected the coracoid to the humerus. In late reptilians and early mammals, this muscle structure was displaced dorsally; while most of its components evolved into the pectoralis major, some fibers eventually attached to the scapula and evolved into the supraspinatus, the infraspinatus, and parts of the subscapularis. @@ -84987,35 +84987,35 @@ infraspinatus muscle http://upload.wikimedia.org/wikipedia/commons/9/99/Arm_muscles_back_numbers.png - + - + - + - + Wikipedia - + infraspinous fossa of the scapula dbpedia - + middle facet of greater tubercle of the humerus dbpedia @@ -85063,9 +85063,9 @@ - - - + + + Teres major is a muscle of the upper limb and one of six scapulohumeral muscles. It is a thick but somewhat flattened muscle. [WP,unvetted]. EHDAA2:0002004 @@ -85087,35 +85087,35 @@ teres major muscle http://upload.wikimedia.org/wikipedia/commons/9/99/Arm_muscles_back_numbers.png - + - + - + - + EHDAA2 - + posterior aspect of the inferior angle of the scapula dbpedia - + medial lip of the intertubercular sulcus of the humerus dbpedia @@ -85338,7 +85338,7 @@ - + @@ -85363,14 +85363,14 @@ muscle of shoulder - + - + prolog @@ -85601,7 +85601,7 @@ - + The knee joint joins the thigh with the leg and consists of two articulations: one between the femur and tibia, and one between the femur and patella. It is the largest and most complicated joint in the human body. The knee is a mobile trocho-ginglymus (i.e. a pivotal hinge joint), which permits flexion and extension as well as a slight medial and lateral rotation[WP,unvetted]. EFO:0001957 @@ -85626,14 +85626,14 @@ knee joint http://upload.wikimedia.org/wikipedia/commons/c/ca/Knee.agr.jpg - + - + definitional @@ -85683,7 +85683,7 @@ - + @@ -85696,7 +85696,7 @@ - + A synovial joint that connects the femur to the acetbulum of the innominate bone. BTO:0001502 EMAPA:19136 @@ -85718,11 +85718,11 @@ hip joint - + - + @@ -85735,13 +85735,13 @@ - + FMA - + definitional @@ -86075,7 +86075,7 @@ - + A joint that connects the forelimb zeugopod and stylopod skeletons[Obol]. In human anatomy, the elbow joint is a compound joint that actually comprises three separate joints: the joints connecting the upper and lower arm: 1) Articulatio humero-ulnaris and 2) Articulatio humero-radialis as well as the proximal joint connecting the forarm bones: 3) Articulatio radio-ulnaris proximalis EMAPA:19102 @@ -86098,14 +86098,14 @@ elbow joint - + - + definitional @@ -86328,7 +86328,7 @@ - + @@ -86355,14 +86355,14 @@ http://upload.wikimedia.org/wikipedia/commons/e/ea/Brachial_plexus_2.svg https://upload.wikimedia.org/wikipedia/commons/d/d4/Brachial_plexus.jpg - + - + MA @@ -86571,7 +86571,7 @@ - + @@ -86614,14 +86614,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + EHDAA2 @@ -86676,7 +86676,7 @@ - + Any muscle organ that is part of a pelvic girdle [Automatically generated definition]. Note that in MA, this is a subclass of pelvis muscle; in FMA this is a hindlimb muscle, but recall in FMA hindlimb includes the girdle. UBERON:0003271 @@ -86696,14 +86696,14 @@ muscle of pelvic girdle - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -86772,7 +86772,7 @@ - + Any muscle organ that is part of a pes [Automatically generated definition]. BTO:0000477 EMAPA:36160 @@ -86786,14 +86786,14 @@ UBERON:0001498 muscle of pes - + - + prolog @@ -86838,7 +86838,7 @@ - + A muscle organ that is part of an arm [Automatically generated definition]. See notes on UBERON:0001460 for possible terminological confusion over term 'arm'. MA uses this consistent with uberon (forelimb muscle is subdivided into shoulder, arm and hand) @@ -86858,14 +86858,14 @@ muscle of arm - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -86928,7 +86928,7 @@ - + Any muscle organ that is part of a manus [Automatically generated definition]. EMAPA:32644 @@ -86944,14 +86944,14 @@ muscle of manus - + - + prolog @@ -87137,7 +87137,7 @@ - + The dorsal interossei of the hand are muscles that occupy the space between the metacarpals. There are four dorsal interossei in each hand. They are specified as 'dorsal' to contrast them with the palmar interossei, which are located on the anterior side of the metacarpals. The dorsal interosseous muscles are bipennate, with each muscle arising by two heads from the adjacent sides of the metacarpal bones, but more extensively from the metacarpal bone of the finger into which the muscle is inserted. They are inserted into the bases of the proximal phalanges and into the extensor expansion of the corresponding extensor digitorum tendon. The middle digit has two dorsal interossei insert onto it while the first digit (thumb) and the fifth digit (little finger) have none[WP]. EMAPA:37519 FMA:37418 @@ -87155,14 +87155,14 @@ Action: abducts medial digits dorsal interosseous of manus - + - + dbpedia @@ -87267,9 +87267,9 @@ - - - + + + The Coracobrachialis is the smallest of the three muscles that attach to the coracoid process of the scapula. (The other two muscles are pectoralis minor and biceps brachii. ) It is situated at the upper and medial part of the arm. It is perforated by and innervated by the musculocutaneous nerve. [WP,unvetted]. EMAPA:36182 @@ -87290,15 +87290,15 @@ coracobrachialis muscle http://upload.wikimedia.org/wikipedia/commons/8/8c/Coracobrachialis.png - + - + - + @@ -87311,20 +87311,20 @@ - + dbpedia - + coracoid process of scapula dbpedia - + medial humerus dbpedia @@ -87373,9 +87373,9 @@ - - - + + + The brachialis (brachialis anticus) is a muscle in the upper arm that flexes the elbow joint. It lies just deep of the biceps brachii, and is a synergist that assists the biceps brachii in flexing at the elbow. It makes up part of the floor of the region known as the cubital fossa. [WP,unvetted]. A muscle of the stylopodium, covering the distal half of the humerus and the anterior part of the elbow joint. It functions to flex the zeugopodium. [TFD][VHOG] @@ -87399,35 +87399,35 @@ brachialis muscle http://upload.wikimedia.org/wikipedia/commons/8/87/Brachialis.png - + - + - + - + dbpedia - + anterior surface of the humerus particularly the distal half of this bone dbpedia - + coronoid process and the tuberosity of the ulna dbpedia @@ -87479,11 +87479,11 @@ - - - - - + + + + + A muscle in the forelimb stylopod which in humans has several functions, the most important being to rotate the forearm and to flex the elbow. [WP,unvetted]. biceps BTO:0003419 @@ -87508,58 +87508,58 @@ biceps brachii https://upload.wikimedia.org/wikipedia/commons/5/5d/Biceps_brachii_muscle06.png - + - + - + - + - + - + Musculocutaneous nerve dbpedia - + short head: coracoid process of the scapula. long head: supraglenoid tubercle dbpedia - + short head: coracoid process of the scapula. long head: supraglenoid tubercle dbpedia - + radial tuberosity and bicipittal aponeurosis into deep fascia on medial part of forearm dbpedia - + dbpedia @@ -87630,7 +87630,7 @@ - + @@ -87677,14 +87677,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + left arch 4 in human embryology.ch @@ -87744,12 +87744,12 @@ - - - - - - + + + + + + The triceps brachii muscle (Latin for 'three-headed' muscle of the arm, it is called a three headed muscle because there are three bundles of muscle, each of different origin, joining together at the elbow) is the large muscle on the back of the human upper limb. It is the muscle principally responsible for extension of the elbow joint (i.e. straightening of the arm). Though a similarly-named muscle, the triceps surae, is found on the lower leg, the triceps brachii is commonly called simply the 'triceps'. [WP,unvetted]. EHDAA2:0002080 @@ -87775,69 +87775,69 @@ triceps brachii https://upload.wikimedia.org/wikipedia/commons/8/83/Triceps_brachii.png - + - + - + - + - + - + - + radial nerve and axillary nerve dbpedia - + radial nerve and axillary nerve dbpedia - + lateral head: posterior humerus dbpedia - + long head: infraglenoid tubercle of scapula dbpedia - + olecranon process of ulna dbpedia - + dbpedia @@ -88162,7 +88162,7 @@ - + @@ -88197,7 +88197,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + @@ -88210,7 +88210,7 @@ - + Wikipedia @@ -88300,12 +88300,6 @@ thoracic aorta http://upload.wikimedia.org/wikipedia/commons/7/75/Gray530.png - - - - - FMA - @@ -88348,7 +88342,7 @@ - + @@ -88396,14 +88390,14 @@ abdominal aorta http://upload.wikimedia.org/wikipedia/commons/a/af/Gray531.png - + - + FMA @@ -88694,11 +88688,11 @@ - - - - - + + + + + The pronator teres is a muscle of the human body (located mainly in the forearm) that, along with the pronator quadratus, serves to pronate the forearm (turning it so the palm faces posteriorly). [WP,unvetted]. EMAPA:36207 FMA:38450 @@ -88714,57 +88708,57 @@ pronator teres http://upload.wikimedia.org/wikipedia/commons/8/87/Pronator-teres.png - + - + - + - + - + - + dbpedia - + humeral head: medial epicondyle of humerus ulnar head: coronoid process of ulna dbpedia - + humeral head: medial epicondyle of humerus ulnar head: coronoid process of ulna dbpedia - + Middle of the lateral surface of the body of the radius dbpedia - + dbpedia @@ -88806,7 +88800,7 @@ - + A muscle of the forearm that acts to flex and abduct the manus. [WP,unvetted]. Muscle which originates on the inner border of the humerus and inserts on the carpus.[AAO] @@ -88826,14 +88820,14 @@ flexor carpi radialis muscle http://upload.wikimedia.org/wikipedia/commons/5/59/Flexor-carpi-radialis.png - + - + 2 and 3 in human @@ -88877,8 +88871,8 @@ - - + + The flexor carpi ulnaris muscle (FCU) is a muscle of the human forearm that acts to flex and adduct the manus. [WP,unvetted]. AAO has a class with the same name, the exact insertion point is unclear; consider grouping :Muscle which originates from the medial condyle of the humerus and inserts on the carpus. [AAO:0010734] @@ -88897,25 +88891,25 @@ flexor carpi ulnaris muscle http://upload.wikimedia.org/wikipedia/commons/c/c1/FCU.png - + - + - + medial epicondyle dbpedia - + dbpedia @@ -88957,9 +88951,9 @@ - - - + + + A muscle in the forearm that flexes the manual digits[WP,modified]. in EMAPA, this is part of the leg, which is presumably a mistake @@ -88978,15 +88972,15 @@ flexor digitorum profundus http://upload.wikimedia.org/wikipedia/commons/2/24/Flexor-digitorum-profundis.png - + - + - + @@ -88999,21 +88993,21 @@ - + upper 3/4 of the volar and medial surfaces of the body of the ulna interosseous membrane and deep fascia of the forearm dbpedia - + base of the distal phalanges of the fingers dbpedia - + dbpedia @@ -89054,8 +89048,8 @@ - - + + Extensor carpi radialis longus is one of the five main muscles that control movements at the wrist. This muscle is quite long, starting on the lateral side of the humerus, and attaching to the base of the second metacarpal bone (metacarpal of the index finger). [WP,unvetted]. EMAPA:36189 @@ -89073,25 +89067,25 @@ extensor carpi radialis longus muscle http://upload.wikimedia.org/wikipedia/commons/7/75/ECR-longus.png - + - + - + lateral supracondylar ridge dbpedia - + base dbpedia @@ -89127,8 +89121,8 @@ - - + + The Extensor carpi radialis brevis is shorter and thicker than the extensor carpi radialis longus. The longus muscle can be found above the distal end of the Extensor carpi radialis brevis. [WP,unvetted]. EMAPA:36188 @@ -89145,24 +89139,24 @@ extensor carpi radialis brevis muscle - + - + - + dbpedia - + base dbpedia @@ -89198,7 +89192,7 @@ - + @@ -89227,7 +89221,7 @@ http://upload.wikimedia.org/wikipedia/commons/2/25/Extensor_carpi_ulnaris_muscle.png http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray418.png - + @@ -89240,7 +89234,7 @@ - + deep part dbpedia @@ -89272,14 +89266,14 @@ - + - + The Abductor pollicis longus lies immediately below the Supinator and is sometimes united with it. [WP,unvetted]. EMAPA:36210 FMA:38515 @@ -89295,24 +89289,24 @@ abductor pollicis longus http://upload.wikimedia.org/wikipedia/commons/6/66/Gray1231.png - + - + - + dbpedia - + dbpedia @@ -89526,7 +89520,7 @@ - + @@ -89563,7 +89557,7 @@ common carotid artery plus branches http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg - + @@ -89576,7 +89570,7 @@ - + Wikipedia @@ -89699,8 +89693,8 @@ - - + + @@ -89750,11 +89744,11 @@ internal carotid artery http://upload.wikimedia.org/wikipedia/commons/9/9c/Gray513.png - + - + @@ -89767,13 +89761,13 @@ - + cjm - + FMA @@ -89852,8 +89846,8 @@ - - + + @@ -89896,24 +89890,24 @@ subclavian artery http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray506.svg - + - + - + EHDAA2 - + EHDAA2 @@ -90425,7 +90419,7 @@ - + The medial plantar artery (internal plantar artery), much smaller than the lateral, passes forward along the medial side of the foot. It is at first situated above the Abductor hallucis, and then between it and the Flexor digitorum brevis, both of which it supplies. At the base of the first metatarsal bone, where it is much diminished in size, it passes along the medial border of the first toe, anastomosing with the first dorsal metatarsal artery. Small superficial digital branches accompany the digital branches of the medial plantar nerve and join the plantar metatarsal arteries of the first three spaces. [WP,unvetted]. EMAPA:37101 @@ -90444,14 +90438,14 @@ medial plantar artery http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray555.png - + - + FMA @@ -90648,7 +90642,7 @@ - + The popliteal vein course runs alongside the popliteal artery but carries the blood from the knee joint and muscles in the thigh and calf back to the heart. Its origin is defined by the junction of the posterior tibial vein and anterior tibial vein. It drains the peroneal vein before reaching the knee joint and turns into the femoral vein when leaving the adductor canal (also known as Hunter's canal). The popliteal artery extends from the femoral artery behind the popliteal fossa which is the space behind the knee. [WP,unvetted]. EMAPA:37181 @@ -90668,14 +90662,14 @@ popliteal vein http://upload.wikimedia.org/wikipedia/commons/6/66/Gray609.png - + - + FMA/obol @@ -90710,8 +90704,8 @@ - - + + A vein of the lower limb that carries blood from the anterior compartment of the leg to the popliteal vein which is forms when it joins with the posterior tibial vein. Like most deep veins, the anterior tibial vein is accompanied by an artery of the same name, the anterior tibial artery, along its course. [WP,unvetted]. @@ -90730,11 +90724,11 @@ anterior tibial vein https://upload.wikimedia.org/wikipedia/commons/4/4e/Gray440_color.png - + - + @@ -90747,13 +90741,13 @@ - + FMA/obol - + FMA/obol @@ -90794,8 +90788,8 @@ - - + + A vein of the lower limb carries blood from the posterior compartment and plantar surface of the foot to the popliteal vein which it forms when it joins with the anterior tibial vein. Like most deep veins, the posterior tibial vein is accompanied by an artery of the same name, the posterior tibial artery, along its course. [WP,unvetted]. EMAPA:37183 @@ -90813,11 +90807,11 @@ posterior tibial vein http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray583.png - + - + @@ -90830,13 +90824,13 @@ - + FMA/obol - + FMA/obol @@ -90871,7 +90865,7 @@ - + The small saphenous vein (also lesser saphenous vein), is a relatively large vein of the superficial posterior leg. [WP,unvetted]. BTO:0003272 @@ -90892,14 +90886,14 @@ small saphenous vein http://upload.wikimedia.org/wikipedia/commons/6/62/Gray582.png - + - + FMA @@ -90934,7 +90928,7 @@ - + A continuation of the Dorsal venous arch of the foot and is the origin of the short saphenous vein. @@ -90949,14 +90943,14 @@ lateral marginal vein - + - + FMA/obol @@ -91061,7 +91055,7 @@ - + A continuation of the Dorsal venous arch of the foot and is the origin of the long saphenous vein. EMAPA:37170 @@ -91075,14 +91069,14 @@ medial marginal vein - + - + FMA/obol @@ -91113,7 +91107,7 @@ - + @@ -91128,14 +91122,14 @@ UBERON:0001551 vein of hindlimb zeugopod - + - + FMA @@ -91164,7 +91158,7 @@ - + @@ -91186,14 +91180,14 @@ kidney arcuate artery https://upload.wikimedia.org/wikipedia/commons/8/87/2610_The_Kidney.jpg - + - + MA @@ -91362,7 +91356,7 @@ - + A tube extending from the mouth to the anus. @@ -91404,14 +91398,14 @@ digestive tract - + - + NCBIBook:NBK10107 @@ -91717,8 +91711,8 @@ - - + + A group of muscles (or in some classifications, muscle bellies) that are located under the jaw and attach to the base of the cranium and typically attaches to the hyoid apparatus via a common tendon. this class refers to the mereological sum of digastric muscles in an organism (typically two). The digastric muscle (also digastricus) (named digastric as it has two bellies) is a small muscle located under the jaw. It lies below the body of the mandible, and extends, in a curved form, from the mastoid process to the symphysis menti. It belongs to the suprahyoid muscles group. A broad aponeurotic layer is given off from the tendon of the digastricus on either side, to be attached to body and greater cornu of the hyoid bone; this is termed the suprahyoid aponeurosis. Wikipedia:Digastric_muscle]. @@ -91741,11 +91735,11 @@ digastric muscle group http://upload.wikimedia.org/wikipedia/commons/2/26/Digastricus.png - + - + @@ -91758,14 +91752,14 @@ - + anterior belly - mandibular division of the trigeminal via the mylohyoid nerve; posterior belly - facial nerve dbpedia - + Orangutan DOI:10.1007/BF02547558 Intermediate tendon dbpedia @@ -91844,8 +91838,8 @@ - - + + A muscle that arises by four tendinous slips from the transverse processes of the third, fourth, fifth, and sixth cervical vertebrae and inserts into the inferior surface of the basilar part of the occipital bone.[WP,modified]. flexion of neck at atlanto-occipital joint AAO:0010666 @@ -91866,11 +91860,11 @@ longus capitis muscle https://upload.wikimedia.org/wikipedia/commons/7/7d/Longus_capitis.png - + - + @@ -91883,14 +91877,14 @@ - + anterior tubercles of the transverse processes of the third fourth fifth and sixth cervical vertebrae dbpedia - + basilar part of the occipital bone dbpedia @@ -91945,8 +91939,8 @@ - - + + The mylohyoid is a pharyngeal arch I muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to mylohyoid and attaches to the midline raphe linking right and left mylohyoid and the mandible. The mylohyoid is a pharyngeal arch I muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to mylohyoid and attaches to the midline raphe linking R and L mylohyoid and the mandible.[FEED] @@ -91970,11 +91964,11 @@ mylohyoid muscle https://upload.wikimedia.org/wikipedia/commons/9/92/Mylohyoid_muscle.PNG - + - + @@ -91987,14 +91981,14 @@ - + mylohyoid nerve from inferior alveolar branch of mandibular nerve V3 dbpedia - + body of hyoid bone and median raphe dbpedia @@ -92057,10 +92051,10 @@ - - - - + + + + The geniohyoid is a muscle that attaches to the mandible and the hyoid apparatus and is innervated by the first cervical nerve (C1). The geniohyoid is a muscle that attaches to the mandible and the hyoid apparatus and is innervated by C1.[FEED] @@ -92085,19 +92079,19 @@ geniohyoid muscle https://upload.wikimedia.org/wikipedia/commons/2/2c/Geniohyoid_muscle.PNG - + - + - + - + @@ -92110,27 +92104,27 @@ - + C1 via the hypoglossal nerve dbpedia - + C1 via the hypoglossal nerve dbpedia - + dbpedia - + dbpedia @@ -92188,7 +92182,10 @@ - + + + + @@ -92201,9 +92198,14 @@ - - - + + + + + + + + Intrinsic muscle of the larynx, innervated by the external division of the laryngeal nerve, a branch of the vagus nerve. It attaches to the anterolateral surface of the cricoid cartilage and the external surface of the thyroid cartilage. EMAPA:19270 @@ -92224,36 +92226,25 @@ cricothyroid muscle http://upload.wikimedia.org/wikipedia/commons/f/f4/Musculuscricothyreoideus.png - - - - - + - + - - external laryngeal branch of the vagus - dbpedia - - - - - + Anterior and lateral cricoid cartilage dbpedia - + Inferior cornu and lamina of the thyroid cartilage dbpedia @@ -92304,7 +92295,7 @@ - + A fleshy subdivision of one side of the face bounded by an eye, ear and the nose. Surface structure that includes the scales, skin, and muscles that are located ventral and posterior to the eye.[TAO] buccal @@ -92329,14 +92320,14 @@ cheek https://upload.wikimedia.org/wikipedia/commons/a/a9/Chica_cachetona.jpg - + - + FMA-abduced-lr @@ -92399,7 +92390,7 @@ - + @@ -92434,14 +92425,14 @@ muscle of larynx - + - + prolog @@ -92502,8 +92493,8 @@ - - + + The inferior pharyngeal constrictor, the thickest of the three constrictors, arises from the sides of the cricoid and thyroid cartilage. Similarly to the superior and middle pharyngeal constrictor muscles, it is innervated by the vagus nerve (cranial nerve X), specifically, by branches from the pharyngeal plexus and by neuronal branches from the recurrent laryngeal nerve. [WP,unvetted]. This is a pharyngeal arch 4/6 muscle that is integral to the pharyngeal tube, participates in oral/pharyngeal behaviors, is innervated by the pharyngeal plexus of the vagus n. and attaches to the laryngeal cartilages and the midline raphe.[FEED] EMAPA:18965 @@ -92528,25 +92519,25 @@ inferior pharyngeal constrictor http://upload.wikimedia.org/wikipedia/commons/2/22/Musculusconstrictorpharyngisinferior.png - + - + - + cricoid and thyroid cartilage dbpedia - + Wikipedia @@ -92640,14 +92631,14 @@ - + - + Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue. Either of a pair of lingual muscles with origin in the mandible, with insertion to the lingual fascia below the mucous membrane and epiglottis, with nerve supply from the hypoglossal nerve, and whose action depresses and protrudes the tongue. [TFD][VHOG] @@ -92676,11 +92667,11 @@ genioglossus muscle http://upload.wikimedia.org/wikipedia/commons/7/7e/Genioglossus.png - + - + @@ -92693,13 +92684,13 @@ - + EHDAA2 - + Wikipedia @@ -92792,7 +92783,7 @@ - + @@ -92821,7 +92812,7 @@ hyoglossus muscle http://upload.wikimedia.org/wikipedia/commons/7/7e/Hyoglossus.png - + @@ -92834,7 +92825,7 @@ - + lingual process in horse dbpedia @@ -92888,8 +92879,8 @@ - - + + The Styloglossus, the shortest and smallest of the three styloid muscles, arises from the anterior and lateral surfaces of the styloid process, near its apex, and from the stylomandibular ligament. Passing downward and forward between the internal and external carotid arteries, it divides upon the side of the tongue near its dorsal surface, blending with the fibers of the Longitudinalis inferior in front of the Hyoglossus; the other, oblique, overlaps the Hyoglossus and decussates with its fibers. [WP,unvetted]. Styloglossus is a muscle that attaches to the tongue and stylohyal and is innervated by Cranial Nerve XII.[FEED] EMAPA:18279 @@ -92905,11 +92896,11 @@ styloglossus http://upload.wikimedia.org/wikipedia/commons/1/16/Styloglossus.png - + - + @@ -92922,13 +92913,13 @@ - + dbpedia - + tip and sides of tongue dbpedia @@ -92967,9 +92958,9 @@ - - - + + + The palatoglossus, glossopalatinus, or palatoglossal muscle is a small fleshy fasciculus, narrower in the middle than at either end, forming, with the mucous membrane covering its surface, the glossopalatine arch. It arises from the anterior surface of the soft palate, where it is continuous with the muscle of the opposite side, and passing downward, forward, and lateralward in front of the palatine tonsil, is inserted into the side of the tongue, some of its fibers spreading over the dorsum, and others passing deeply into the substance of the organ to intermingle with the Transversus linguæ. [WP,unvetted]. Palatoglossus is a muscle that attaches to the soft palate and the tongue and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED] @@ -92991,35 +92982,35 @@ http://upload.wikimedia.org/wikipedia/commons/6/6e/Gray1014.png http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray1028.png - + - + - + - + Wikipedia - + aponeurosis dbpedia - + dbpedia @@ -93059,7 +93050,10 @@ - + + + + @@ -93072,7 +93066,12 @@ - + + + + + + @@ -93107,23 +93106,12 @@ extrinsic muscle of tongue - - - - true - - - - - check palatoglossus - Wikipedia - @@ -93167,7 +93155,10 @@ - + + + + @@ -93183,8 +93174,13 @@ - - + + + + + + + The intrinsic tongue muscles are an integral part of the tongue and completely contained within the tongue that are innervated by Cranial Nerve XII. The intrinsic tongue muscles are an integral part of the tongue that are innervated by Cranial Nerve XII.[FEED] @@ -93203,11 +93199,7 @@ intrinsic muscle of tongue - - - - - + @@ -93220,14 +93212,7 @@ - - FEED - Wikipedia - - - - - + EHDAA2 @@ -93284,7 +93269,7 @@ - + A muscle innervated by a facial nerve. FMA:46751 @@ -93318,14 +93303,14 @@ facial muscle http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png - + - + FEED Wikipedia @@ -93429,10 +93414,10 @@ - - - - + + + + @@ -93460,19 +93445,19 @@ orbicularis oculi muscle http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray379.png - + - + - + - + @@ -93485,26 +93470,26 @@ - + branches of the facial nerve and Zygomatic branches of Facial Nerve dbpedia - + dbpedia - + dbpedia - + dbpedia @@ -93548,7 +93533,10 @@ - + + + + @@ -93558,8 +93546,13 @@ - - + + + + + + + @@ -93619,24 +93612,14 @@ olfactory nerve http://upload.wikimedia.org/wikipedia/commons/b/be/Gray771.png - - - - - + - - ISBN:0471888893 - - - - - + ISBN:0471888893 @@ -93763,8 +93746,8 @@ - - + + The levator labii superioris (or quadratus labii superioris) is a broad sheet, the origin of which extends from the side of the nose to the zygomatic bone. Its medial fibers form the angular head, which arises by a pointed extremity from the upper part of the frontal process of the maxilla and passing obliquely downward and lateralward divides into two slips. One of these is inserted into the greater alar cartilage and skin of the nose; the other is prolonged into the lateral part of the upper lip, blending with the infraorbital head and with the Orbicularis oris. The intermediate portion or infraorbital head arises from the lower margin of the orbit immediately above the infraorbital foramen, some of its fibers being attached to the maxilla, others to the zygomatic bone. Its fibers converge, to be inserted into the muscular substance of the upper lip between the angular head and the Caninus. The lateral fibers, forming the zygomatic head, arise from the malar surface of the zygomatic bone immediately behind the zygomaticomaxillary suture and pass downward and medialward to the upper lip. [WP,unvetted]. EMAPA:37503 FMA:46805 @@ -93779,11 +93762,11 @@ levator labii superioris http://upload.wikimedia.org/wikipedia/commons/8/8f/Levator_labii_superioris.png - + - + @@ -93796,14 +93779,14 @@ - + Skin and muscle of the upper lip dbpedia - + Skin and muscle of the upper lip dbpedia @@ -93841,10 +93824,10 @@ - - - - + + + + A muscle of facial expression, innervated by the facial nerve, attached to the skin of the lower lip, orbicularis oris muscle, and mandible, and superficial and lateral to the mentalis muscle. See Diogo et al., 2009; Burrows et al., 2011). EMAPA:37516 FMA:46816 @@ -93858,19 +93841,19 @@ depressor labii inferioris http://upload.wikimedia.org/wikipedia/commons/9/96/Depressor_labii_inferioris.png - + - + - + - + @@ -93883,27 +93866,27 @@ - + FMA-abduced-lr - + oblique line of the mandible between the symphysis and the mental foramen dbpedia - + integument of the lower lip Orbicularis oris fibers its fellow of the opposite side dbpedia - + integument of the lower lip Orbicularis oris fibers its fellow of the opposite side dbpedia @@ -93983,8 +93966,8 @@ - - + + The buccinator is a muscle that is attached to the mandible, skin, pterygomandibular raphe and maxilla, and is innervated by Cranial Nerve VII and participates in oropharyngeal behavior. logical definition provided by FEED @@ -94007,25 +93990,25 @@ buccinator muscle http://upload.wikimedia.org/wikipedia/commons/d/df/Buccinator.jpg - + - + - + from the alveolar processes of the maxillary bone and mandible temporomandibular joint dbpedia - + dbpedia says: in the fibers of the orbicularis oris FEED @@ -94853,7 +94836,7 @@ - + An unpaired vein which in humans arises from the right ascending lumbar vein or the vena cava, enters the thorax through the aortic orifice in the diaphragm, and terminates in the superior vena cava; unlike humans, mice have a single and left-sided azygos vein that develops from the paired embryonic cardinal venous system and drains most of the right and left thoracic walls into the left anterior vena cava[MP]. check development relationships in different species @@ -94875,14 +94858,14 @@ azygos vein https://upload.wikimedia.org/wikipedia/commons/b/b4/Azygos_vein.png - + - + ISBN:0443065837 @@ -94912,7 +94895,7 @@ - + @@ -94942,14 +94925,14 @@ auricular muscle http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray906.png - + - + MA @@ -95074,7 +95057,7 @@ - + @@ -95087,9 +95070,9 @@ - - - + + + Pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors, is innervated by masseteric nerve branches of the trigeminal nerve (CN V), and attaches to mandible and zygomatic arch. The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati).[well established][VHOG] @@ -95121,40 +95104,52 @@ https://github.com/obophenotype/uberon/issues/540 http://upload.wikimedia.org/wikipedia/commons/7/78/Illu_head_neck_muscle.jpg - + - + - + - + - + + FMA + + + + + + FMA + + + + + zygomatic arch and maxilla dbpedia - + zygomatic arch and maxilla dbpedia - + FEED @@ -95201,18 +95196,6 @@ Wikipedia:Masseter_muscle - - - - - FMA - - - - - - FMA - @@ -95220,8 +95203,8 @@ - - + + Pharyngeal arch 1 muscle that is innervated by the deep temporal branches of the trigeminal nerve and attaches to the wall of the braincase (including the cranial vault) and mandible. Pharyngeal arch 1 muscle that is innervated by the deep temporal nerves and attaches to the wall of the braincase and mandible.[FEED] @@ -95251,25 +95234,25 @@ temporalis muscle http://upload.wikimedia.org/wikipedia/commons/d/d3/Gray382.png - + - + - + coronoid process of the mandible. dbpedia - + dbpedia @@ -95354,7 +95337,7 @@ - + The muscle that stabilizes the stapes bone. The stapedius emerges from a pinpoint foramen in the apex of the pyramidal eminence (a hollow, cone-shaped prominence in the posterior wall of the tympanic cavity), and inserts into the neck of the stapes. [WP,unvetted]. The depressor mandibulae of tetrapods, which opens the jaws, is the homologue of the levator operculi and epihyoidean. In mammals, the depressor mandibulae evolves into the stapedius (...).[well established][VHOG] @@ -95377,14 +95360,33 @@ stapedius muscle http://upload.wikimedia.org/wikipedia/commons/6/65/Musculusstapedius.png - + + + + + UMLS:C0038151 + ncithesaurus:Stapedius_Muscle + + + + + stapedius + EHDAA2:0001909 + + + + + musculus stapedius + Wikipedia:Stapedius_muscle + + - + neck of stapes dbpedia @@ -95404,25 +95406,6 @@ ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.398 http://bgee.unil.ch/ - - - - UMLS:C0038151 - ncithesaurus:Stapedius_Muscle - - - - - stapedius - EHDAA2:0001909 - - - - - musculus stapedius - Wikipedia:Stapedius_muscle - - @@ -95442,7 +95425,7 @@ - + @@ -95455,8 +95438,8 @@ - - + + The larger of the two muscles of the tympanic cavity, is contained in the bony canal above the osseous portion of the auditory tube. Its role is to dampen sounds produced from chewing. It arises from the cartilaginous portion of the auditory tube and the adjoining part of the great wing of the sphenoid, as well as from the osseous canal in which it is contained. Passing backward through the canal, it ends in a slender tendon which enters the tympanic cavity, makes a sharp bend around the extremity of the septum, known as the processus cochleariformis[1], and is inserted into the manubrium of the malleus, near its root[WP]. The division of the adductor mandibulae in the various lines of tetrapod evolution correlates with divergences in their methods of feeding. (...) As the jaws become stronger and their movements more complex in the line of evolution toward mammals, the adductor complex becomes divided into several distinct muscles (temporalis, masseter, pterygoideus, tensor tympani, tensor veli palati).[well established][VHOG] @@ -95484,35 +95467,35 @@ tensor tympani http://upload.wikimedia.org/wikipedia/commons/8/82/Gray912.png - + - + - + - + medial pterygoid nerve from the mandibular nerve dbpedia - + dbpedia - + handle of the malleus dbpedia @@ -95571,9 +95554,9 @@ - - - + + + Skeletal muscle derived from cranial mesoderm and controls eye movements. todo - resolve discrepancies in which muscles are considered extra-ocular @@ -95617,34 +95600,34 @@ extra-ocular muscle http://upload.wikimedia.org/wikipedia/commons/6/61/MRI_of_human_eye.jpg - + - + - + - + EHDAA2 - + HPO:pr - + EHDAA2 @@ -95751,7 +95734,7 @@ - + The medial rectus muscle is a muscle in the orbit. As with most of the muscles of the orbit, it is innervated by the inferior division of the oculomotor nerve (Cranial Nerve III). This muscle shares an origin with several other extrinsic eye muscles, the anulus tendineus, or common tendon. It is the largest of the extraocular muscles and its only action is adduction of the eyeball. [WP,unvetted]. @@ -95783,7 +95766,7 @@ medial rectus extraocular muscle http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png - + @@ -95796,7 +95779,7 @@ - + inferior division of the oculomotor nerve dbpedia @@ -95867,7 +95850,7 @@ - + The lateral rectus muscle is a muscle in the orbit. It is one of six extraocular muscles that control the movements of the eye (abduction in this case) and the only muscle innervated by the abducens nerve, cranial nerve VI. [WP,unvetted]. @@ -95901,7 +95884,7 @@ lateral rectus extra-ocular muscle http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png - + @@ -95914,7 +95897,7 @@ - + dbpedia @@ -95994,7 +95977,7 @@ - + @@ -96021,7 +96004,7 @@ levator palpebrae superioris http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png - + @@ -96034,7 +96017,7 @@ - + FMA @@ -96058,7 +96041,7 @@ - + The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. BTO:0000654 @@ -96080,7 +96063,7 @@ ciliary muscle http://upload.wikimedia.org/wikipedia/commons/2/28/Gray872.png - + @@ -96099,7 +96082,7 @@ - + FMA @@ -96216,10 +96199,10 @@ - - - - + + + + A sphincter muscle that is part of the iris. In humans, it functions to constrict the pupil in bright light or during accommodation. Its dimensions are about 0.75 mm wide by 0.15 mm thick. It is controlled by parasympathetic fibers that originate from the Edinger-Westphal nucleus, travel along the oculomotor nerve (CN III), synapse in the ciliary ganglion, and then enter the eye via the short ciliary nerves. Initially, all the myocytes are of the smooth muscle type, but much later in life, so that ultimately most cells are of the striated muscle type. [WP,unvetted] WP says: It is found in vertebrates and some cephalopods; this class refers to the vertebrate structure @@ -96253,19 +96236,19 @@ sphincter pupillae http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png - + - + - + - + @@ -96278,27 +96261,27 @@ - + ISBN:0781772214 - + encircles iris dbpedia - + encircles iris dbpedia - + dbpedia @@ -96406,10 +96389,10 @@ - - - - + + + + A smooth muscle of the eye, running radially in the iris that functions as a dilator. [WP,unvetted]. It is innervated by the sympathetic system, which acts by releasing noradrenaline, which acts on alpha1-receptors. Thus, when presented with a threatening stimuli that activates the fight-or-flight response, this innervation dilates the iris, thus temporarily letting more light reach the retina @@ -96445,19 +96428,19 @@ dilatator pupillae http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray878.png - + - + - + - + @@ -96470,27 +96453,27 @@ - + ISBN:0781772214 - + outer margins of iris dbpedia - + inner margins of iris dbpedia - + dbpedia @@ -96701,7 +96684,7 @@ - + @@ -96728,14 +96711,14 @@ lingual artery https://upload.wikimedia.org/wikipedia/commons/3/3c/Lingual_artery.PNG - + - + FMA-abduced-lr @@ -96792,7 +96775,7 @@ - + @@ -96820,14 +96803,14 @@ sublingual artery http://upload.wikimedia.org/wikipedia/commons/7/7a/Gray559.png - + - + FMA @@ -97472,8 +97455,8 @@ - - + + @@ -97502,25 +97485,25 @@ central retinal artery https://upload.wikimedia.org/wikipedia/commons/5/59/Gray514_updated.png - + - + - + proximal portion ISBN:0781772214 - + FMA @@ -97629,7 +97612,7 @@ - + @@ -97652,14 +97635,14 @@ lacrimal artery http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png - + - + FMA @@ -97756,7 +97739,7 @@ - + One of a pair of arteries on the brain that supply oxygen to most medial portions of frontal lobes and superior medial parietal lobes. The 2 anterior cerebral arteries arise from the internal carotid artery and are part of the Circle of Willis. @@ -97778,14 +97761,14 @@ anterior cerebral artery https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg - + - + FMA WP @@ -97939,7 +97922,7 @@ - + The middle cerebral artery (MCA) is one of the three major paired arteries that supplies blood to the cerebrum. The MCA arises from the internal carotid and continues into the lateral sulcus where it then branches and projects to many parts of the lateral cerebral cortex. It also supplies blood to the anterior temporal lobes and the insular cortices. The left and right MCAs rise from trifurcations of the internal carotid arteries and thus are connected to the anterior cerebral arteries and the posterior communicating arteries, which connect to the posterior cerebral arteries. The MCAs are not considered a part of the Circle of Willis. [WP,unvetted]. BTO:0005206 @@ -97962,14 +97945,14 @@ middle cerebral artery https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg - + - + FMA WP @@ -98006,15 +97989,23 @@ - + + + + - - + + + + + + + One of a pair of right-sided and left-sided blood vessels in the circle of Willis. It connects the three cerebral arteries of the same side. Anteriorly, it is one portion of the terminal trifurcation of the internal carotid artery. The anterior cerebral artery and the middle cerebral artery are the other two branches of the trifurcation. Posteriorly, it communicates with the posterior cerebral artery. @@ -98044,27 +98035,16 @@ posterior communicating artery http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg - - - - - + - + FMA-abduced-lr - - - - - FMA - ZFA - @@ -98306,8 +98286,8 @@ - - + + A major lymphatic vessel that drains lymph from the lower body, left appendage, and left thorax into the junction of the left jugular and subclavian veins. placement of the ZFA class here is dubious @@ -98335,24 +98315,24 @@ thoracic duct http://upload.wikimedia.org/wikipedia/commons/7/75/Gray599.png - + - + - + TAO - + EHDAA2 @@ -98436,7 +98416,7 @@ - + @@ -98472,14 +98452,14 @@ basilar artery http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg - + - + EHDAA2 @@ -98529,7 +98509,7 @@ - + @@ -98551,14 +98531,14 @@ mesencephalic artery - + - + ZFA @@ -98702,7 +98682,7 @@ - + @@ -98728,14 +98708,14 @@ posterior cerebral artery https://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg - + - + FMA-abduced-lr @@ -99090,10 +99070,10 @@ - - - - + + + + The first major branch of the abdominal aorta. EHDAA2:0004519 @@ -99124,44 +99104,44 @@ celiac artery http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png - + - + - + - + - + ISBN:0073040584 - + ISBN:0073040584 - + ISBN:0073040584 - + ISBN:0073040584 @@ -99329,7 +99309,7 @@ - + The superior sagittal sinus (also known as the superior longitudinal sinus), within a human cranium, is an area above/behind the brain, which allows blood veins to span the area, from the top of the head towards the back. It is believed that the cerebrospinal fluid drains through the arachnoid granulations into the dural venous sinuses of the superior sagittal sinus. [WP,unvetted]. EMAPA:18636 @@ -99347,14 +99327,14 @@ superior sagittal sinus https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.gif - + - + cjm @@ -99421,7 +99401,7 @@ - + @@ -99476,14 +99456,14 @@ oculomotor nerve http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png - + - + Wikipedia @@ -99805,7 +99785,7 @@ - + @@ -99865,14 +99845,14 @@ trigeminal nerve https://upload.wikimedia.org/wikipedia/commons/9/99/Gray778_Trigeminal.png - + - + Wikipedia @@ -99995,8 +99975,8 @@ - - + + @@ -100053,25 +100033,25 @@ abducens nerve https://upload.wikimedia.org/wikipedia/commons/2/29/Abducens_nerve1.png - + - + - + found in all vertebrates except lampreys and hagfishes Wikipedia - + Wikipedia @@ -100183,15 +100163,15 @@ - + - - + + @@ -100252,34 +100232,34 @@ facial nerve http://upload.wikimedia.org/wikipedia/commons/1/1f/Cranial_nerve_VII.svg - + - + - + - + ZFA - + Wikipedia - + Wikipedia @@ -100421,7 +100401,7 @@ - + @@ -100485,14 +100465,14 @@ vestibulocochlear nerve http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png - + - + ISBN:0471888893 @@ -100607,7 +100587,7 @@ - + @@ -100661,14 +100641,14 @@ glossopharyngeal nerve http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png - + - + motor Wikipedia @@ -101138,7 +101118,7 @@ - + The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted]. Vein which collects blood from muscles of the head and drains into the external jugular vein.[AAO] @@ -101161,14 +101141,14 @@ facial vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA @@ -101231,7 +101211,7 @@ - + @@ -101254,14 +101234,14 @@ supraorbital vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA @@ -101302,7 +101282,7 @@ - + A vein in the chin that is connected to the sublingual and anterior jugular veins and drains into the facial vein. EMAPA:37188 @@ -101315,14 +101295,14 @@ submental vein - + - + FMA/obol @@ -101350,7 +101330,7 @@ - + The retromandibular vein (temporomaxillary vein, posterior facial vein), formed by the union of the superficial temporal and maxillary veins, descends in the substance of the parotid gland, superficial to the external carotid artery but beneath the facial nerve, between the ramus of the mandible and the sternocleidomastoideus muscle. It divides into two branches: an anterior, which passes forward and unites with the anterior facial vein to form the common facial vein. a posterior, which is joined by the posterior auricular vein and becomes the external jugular vein. [WP,unvetted]. @@ -101370,14 +101350,14 @@ retromandibular vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA @@ -101425,7 +101405,7 @@ - + The superficial temporal vein is a vein of the side of the head. [WP,unvetted]. BTO:0003748 @@ -101443,14 +101423,14 @@ superficial temporal vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA Wikipedia @@ -101480,7 +101460,7 @@ - + @@ -101497,14 +101477,14 @@ middle temporal vein - + - + FMA TFD @@ -101591,7 +101571,7 @@ - + A vein that consists of a short trunk which accompanies the first part of the internal maxillary artery. It is formed by a confluence of the veins of the pterygoid plexus, and passes backward between the sphenomandibular ligament and the neck of the mandible, and unites with the superficial temporal vein to form the retromandibular vein. [WP,unvetted]. in horses, a branch of the external jugular gives off the occipital and caudal auricular vein @@ -101608,14 +101588,14 @@ maxillary vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA @@ -101698,7 +101678,7 @@ - + The anterior auricular veins are veins which drain the anterior aspect of the external ear. [WP,unvetted]. EMAPA:37132 @@ -101714,14 +101694,14 @@ anterior auricular vein http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray557.png - + - + FMA @@ -101882,9 +101862,9 @@ - - - + + + The triceps surae is a pair of muscles located at the calf - the gastrocnemius and the soleus. These muscles both insert into the calcaneus, the bone of the heel of the human foot, and form the major part of the muscle of the back part of the lower leg, commonly known as the calf muscle. The triceps surae is connected to the foot through the Achilles tendon, and has 3 heads deriving from the 2 major masses of muscle. The superficial portion (the gastrocnemius) gives off 2 heads attaching to the base of the femur directly above the knee. The deep (profundis) mass of muscle (the soleus) forms the remaining head which attaches to the superior posterior area of the tibia. The triceps surae is innervated by the tibial nerve, specifically, nerve roots L5-S2. [WP,unvetted]. A set of muscles in FMA, a single organ in MA @@ -101905,34 +101885,34 @@ triceps surae http://upload.wikimedia.org/wikipedia/commons/5/57/Illu_lower_extremity_muscles.jpg - + - + - + - + dbpedia - + dbpedia - + dbpedia @@ -102054,12 +102034,12 @@ - - - - - - + + + + + + The Tibialis posterior is the most central of all the leg muscles, and is located in the posterior compartment of the leg. It is the key stabilizing muscle of the lower leg. [WP,unvetted]. BTO:0000867 EMAPA:36255 @@ -102079,64 +102059,64 @@ tibialis posterior http://upload.wikimedia.org/wikipedia/commons/9/92/Gray442.png - + - + - + - + - + - + - + dbpedia - + dbpedia - + dbpedia - + dbpedia - + dbpedia - + dbpedia @@ -102445,8 +102425,8 @@ - - + + @@ -102473,25 +102453,25 @@ central retinal vein - + - + - + proximal portion ISBN:0781772214 - + FMA/obol @@ -102603,7 +102583,7 @@ - + @@ -102663,7 +102643,7 @@ trigeminal ganglion http://upload.wikimedia.org/wikipedia/commons/6/69/Gray776.png - + @@ -102676,7 +102656,7 @@ - + Bgee:AN @@ -102800,11 +102780,11 @@ - - - - - + + + + + @@ -102834,23 +102814,23 @@ occipital bone http://upload.wikimedia.org/wikipedia/commons/2/27/Gray194.png - + - + - + - + - + @@ -102863,32 +102843,32 @@ - + FMA - + basi paired exo and supra occipital bones MA-modified - + interparietal (postparietal) - + WP - + PMID:11523816 @@ -102950,10 +102930,10 @@ - - - - + + + + An unpaired bone situated at the base of the skull in front of the temporal bone and basilar part of the occipital bone. The sphenoid bone is one of the seven bones that articulate to form the orbit. Its shape somewhat resembles that of a butterfly or bat with its wings extended. part of viscerocranium (facial skeleton) in FMA @@ -102981,19 +102961,19 @@ sphenoid bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg - + - + - + - + @@ -103006,25 +102986,25 @@ - + orbito pre and basi sphenoid - + pterygoid process - + alisphenoid - + cjm @@ -103079,9 +103059,9 @@ - - - + + + The large, irregular bone located at the base and side of the skull; consists of three parts at birth: squamous, tympanic, and petrous. In many mammals, as in humans, the petrosal, ectotympanic and squamosal bones synostose to form the temporal bone + styloid process @@ -103107,15 +103087,15 @@ temporal bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg - + - + - + @@ -103128,20 +103108,20 @@ - + petrosal - + squamosal plus angular temporal series - + styloid process @@ -103203,7 +103183,7 @@ - + @@ -103238,7 +103218,7 @@ ethmoid bone http://upload.wikimedia.org/wikipedia/commons/6/66/Illu_cranial_bones2.jpg - + @@ -103251,7 +103231,7 @@ - + definitional @@ -103324,14 +103304,14 @@ - + - + @@ -103367,11 +103347,11 @@ lacrimal bone http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png - + - + @@ -103384,14 +103364,14 @@ - + orbital series ISBN:0073040584 - + FMA-abduced-lr @@ -103479,8 +103459,8 @@ - - + + @@ -103519,11 +103499,11 @@ nasal bone http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg - + - + @@ -103536,14 +103516,14 @@ - + facial series ISBN:0073040584 - + FMA-abduced-lr @@ -103641,8 +103621,8 @@ - - + + @@ -103683,11 +103663,11 @@ palatine bone http://upload.wikimedia.org/wikipedia/commons/4/44/Gray996.png - + - + @@ -103700,13 +103680,13 @@ - + FMA-abduced-lr - + ISBN:0073040584 @@ -103788,14 +103768,14 @@ - + - + @@ -103837,11 +103817,11 @@ jugal bone http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray164.png - + - + @@ -103854,14 +103834,14 @@ - + orbital series ISBN:0073040584 - + FMA-abduced-lr @@ -104081,8 +104061,8 @@ - - + + A horseshoe shaped bone situated in the anterior midline of the neck between the chin and the thyroid cartilage. The hyoid bone provides attachment to the muscles of the floor of the mouth and the tongue above, the larynx below, and the epiglottis and pharynx behind. [WP,modified]. Paired processes that extend posterolaterally from the posterior margin of the hyoid plate. These processes are the ossified posteromedial processes and invest the laryngeal apparatus.[AAO] @@ -104111,11 +104091,11 @@ hyoid bone http://upload.wikimedia.org/wikipedia/commons/1/1f/Gray186.png - + - + @@ -104128,13 +104108,13 @@ - + Wikipedia - + Wikipedia @@ -104356,9 +104336,9 @@ - - - + + + The stapes or stirrup is the stirrup-shaped small bone or ossicle in the middle ear which is attached to the incus laterally and to the fenestra ovalis, the 'oval window' medially. The oval window is adjacent to the vestibule of the inner ear. The stapes is the smallest and lightest bone in the human body. The stapes transmits the sound vibrations from the incus to the membrane of the inner ear inside the fenestra ovalis. The stapes is also stabilized by the stapedius muscle, which is innervated by the facial nerve. In non-mammalian vertebrates, the bone homologous to the stapes is usually called the columella; however, in reptiles, either term may be used[WP,unvetted]. @@ -104394,35 +104374,35 @@ stapes bone http://upload.wikimedia.org/wikipedia/commons/c/c1/Gray918.png - + - + - + - + Wikipedia - + DOI:10.1111/j.1469-7580.2006.00524.x classical definition - + definitional @@ -104554,7 +104534,7 @@ - + The incus or anvil is the anvil-shaped small bone or ossicle in the middle ear. It connects the malleus to the stapes. It was first described by Alessandro Achillin of Bologna. The incus transmits sound vibrations from the malleus to the stapes. The incus only exists in mammals, and is derived from a reptilian upper jaw bone, the quadrate bone. Embryologically it is derived from the first pharyngeal arch along with the rest of the bones of mastication, such as the maxilla and mandible. [WP,unvetted]. According to this theory (Reichert-Gaupp theory), the mammalian stapes is derived from the reptilian columella, the incus from the quadrate and the malleus from the articular (...).[well established][VHOG] @@ -104577,14 +104557,14 @@ incus bone http://upload.wikimedia.org/wikipedia/commons/d/df/Gray917.png - + - + EMAPA-implied @@ -104642,8 +104622,8 @@ - - + + The malleus or hammer is a hammer-shaped small bone or ossicle of the middle ear which connects with the incus and is attached to the inner surface of the eardrum. The word is Latin for hammer. It transmits the sound vibrations from the eardrum to the incus. The malleus is unique to mammals, and evolved from a lower jaw bone in basal amniotes called the articular, which still forms part of the jaw joint in reptiles. Embryologically it is derived from the first pharyngeal arch along with the rest of the bones of mastication, such as the maxilla and mandible. [WP,unvetted]. According to this theory (Reichert-Gaupp theory), the mammalian stapes is derived from the reptilian columella, the incus from the quadrate and the malleus from the articular (...).[well established][VHOG] @@ -104666,24 +104646,24 @@ malleus bone http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray916.png - + - + - + Wikipedia - + cjm @@ -105117,7 +105097,7 @@ - + @@ -105154,7 +105134,7 @@ exoccipital bone http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray131.png - + @@ -105167,7 +105147,7 @@ - + ZFA @@ -105283,7 +105263,7 @@ - + The petrous portion of the temporal bone or pyramid is pyramidal and is wedged in at the base of the skull between the sphenoid and occipital bones. Directed medially, forward, and a little upward, it presents for examination a base, an apex, three surfaces, and three angles, and contains, in its interior, the essential parts of the organ of hearing. The petrous portion is among the most basal elements of the skull and forms part of the endocranium.[WP,unvetted]. The petrosal bone arises from the two otic bones on the lateral wall of the chondrocranium and encases the inner ear of mammals. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Grande_L, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF, p.258, see_Liem_KF][VHOG] derivative of prootic and opisthotic @@ -105310,14 +105290,14 @@ petrous part of temporal bone http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png - + - + FMA @@ -105380,9 +105360,9 @@ - - - + + + @@ -105425,15 +105405,15 @@ http://upload.wikimedia.org/wikipedia/commons/e/eb/Skull_synapsida_1.png http://upload.wikimedia.org/wikipedia/commons/f/fd/Gray144.png - + - + - + @@ -105446,20 +105426,20 @@ - + see comments - + temporal series ISBN:0073040584 - + EHDAA2 PMID:11523816 @@ -105560,7 +105540,7 @@ - + @@ -105592,14 +105572,14 @@ orbit of skull - + - + FMA-abduced-lr @@ -105738,7 +105718,7 @@ - + The nervus intermedius, or intermediate nerve, is the part of the facial nerve (cranial nerve VII) located between the motor component of the facial nerve and the vestibulocochlear nerve (cranial nerve VIII). It contains the sensory and parasympathetic fibers of the facial nerve. Upon reaching the facial canal, it joins with the motor root of the facial nerve at the geniculate ganglion. [WP,unvetted]. BAMS:iVIIn BAMS:imn @@ -105763,14 +105743,14 @@ sensory root of facial nerve http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png - + - + Wikipedia @@ -105826,9 +105806,9 @@ - - - + + + @@ -105877,15 +105857,15 @@ geniculate ganglion http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray789.png - + - + - + @@ -105898,20 +105878,20 @@ - + EHDAA2:0004623 ZFA - + EHDAA2:0004623 - + EHDAA2:0000491 @@ -106017,8 +105997,8 @@ - - + + @@ -106048,11 +106028,11 @@ glossopharyngeal ganglion - + - + @@ -106065,7 +106045,7 @@ - + dorsal EHDAA2 ISBN:0471888893 @@ -106074,7 +106054,7 @@ - + ventrolateral EHDAA2 ISBN:0471888893 @@ -106384,9 +106364,9 @@ - - - + + + @@ -106424,34 +106404,34 @@ nasal septum http://upload.wikimedia.org/wikipedia/commons/6/65/Gray854.png - + - + - + - + AAO - + AAO - + EHDAA2-abduced @@ -106535,7 +106515,7 @@ - + @@ -106584,14 +106564,14 @@ nasal cavity http://upload.wikimedia.org/wikipedia/commons/d/d4/Illu01_head_neck.jpg - + - + cjm @@ -106720,7 +106700,7 @@ - + @@ -106773,14 +106753,14 @@ jaw skeleton - + - + cjm @@ -106987,7 +106967,7 @@ - + @@ -107021,14 +107001,14 @@ lower jaw region http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png - + - + Wikipedia:Mandibular_prominence @@ -107075,7 +107055,7 @@ - + @@ -107126,14 +107106,14 @@ eyelid https://upload.wikimedia.org/wikipedia/commons/8/84/Eye_makeup.jpg - + - + multiple @@ -107397,7 +107377,7 @@ - + Nuclear complex containing subnuclei that give rise to the axons of the occulomotor nerve, both motor and parasympathetic fibers, situated at the midline at the level of the superior colliculus in the midbrain tegmentum (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 533-534). @@ -107455,7 +107435,7 @@ oculomotor nuclear complex http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png - + @@ -107468,7 +107448,7 @@ - + ZFA @@ -107634,14 +107614,14 @@ - + - + @@ -107688,24 +107668,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - + - + - + EMAPA - + fusion http://www.indiana.edu/~anat550/hnanim/face/face.html @@ -107858,8 +107838,8 @@ - - + + Elongated nucleus located in the midbrain tegmentum that receives proprioceptive input from both teh extraocular and the masticatory muscles. Contrary to the general rule, the cell bodies that give rise to these sensory fibers are located within the mesencephalic nucleus rather than in a peripheral ganglion. Some of the sensory fibers in the mesencephalic root give off collaterals to the trigeminal motor nucleus, thereby providing the anatomic basis for the monosynaptic jaw reflex. (Heimer, L. The Human Brain and Spinal Cord, 2nd ed. 1996, page 248). develops from NC in some species[https://github.com/obophenotype/uberon/wiki/The-neural-crest] Not of NC origin[DOI:10.1002/dvdy.1197]. part of midbrain tegmentum in NIF and MA. the neurons of the mesencephalic trigeminal nucleus are the only centrally located primary sensory neurons in amniotes; all others are extramedullary @@ -107904,24 +107884,24 @@ mesencephalic nucleus of trigeminal nerve http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png - + - + - + NIF - + Wikipedia @@ -108042,7 +108022,7 @@ - + A region of histologically disparate cells located just dorsal to the inferior olivary nucleus in the lateral portion of the upper medulla. It receives upper motor neuron innervation directly via the corticobulbar tract This nucleus gives rise to the efferent motor fibers of the vagus nerve terminating in the laryngeal and pharyngeal muscles, as well as to the efferent motor fibers of the glossopharyngeal nerve (CN IX) terminating in the stylopharyngeus. [WP,unvetted]. @@ -108080,7 +108060,7 @@ nucleus ambiguus http://upload.wikimedia.org/wikipedia/commons/9/93/Gray695.png - + @@ -108093,7 +108073,7 @@ - + definitional @@ -108499,8 +108479,8 @@ - - + + @@ -108513,16 +108493,16 @@ - - - + + + - + A muscular organ in the floor of the mouth. in MA the tongue is part of the oral region, which in uberon is treated as the oral opening. consider revising oral opening - oral region equivalence. @@ -108569,27 +108549,27 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - + - + - + - + - + - + @@ -108602,7 +108582,7 @@ - + BTO EHDAA2 FMA @@ -108611,31 +108591,31 @@ - + MA - + anterior 2/3 - + Wikipedia - + Wikipedia - + definitional @@ -108715,7 +108695,7 @@ - + One of the paired paranasal sinuses, located in the body of the sphenoid bone and communicating with the highest meatus of the nasal cavity on the same side[MESH]. The sphenoidal sinuses (or sphenoid) contained within the body of the sphenoid vary in size and shape; owing to the lateral displacement of the intervening septum they are rarely symmetrical. The following are their average measurements: vertical height, 2.2 cm. ; transverse breadth, 2 cm. ; antero-posterior depth, 2.2 cm. [WP,unvetted]. FMA:54683 GAID:359 @@ -108733,14 +108713,14 @@ sphenoidal sinus http://upload.wikimedia.org/wikipedia/commons/e/e3/Gray856.png - + - + FMA-abduced-lr @@ -108795,12 +108775,6 @@ UBERON:0001725 cranial synchondrosis - - - - - FMA - @@ -108820,7 +108794,7 @@ - + BIRNLEX:4102 EMAPA:32777 FMA:54819 @@ -108835,14 +108809,14 @@ papilla of tongue - + - + FMA-modified @@ -108866,9 +108840,9 @@ - - - + + + @@ -108918,34 +108892,34 @@ taste bud http://upload.wikimedia.org/wikipedia/commons/5/5a/Gray1018.png - + - + - + - + NIF - + FMA - + http://dev.biologists.org/content/128/22/4573.full @@ -109148,7 +109122,7 @@ - + @@ -109186,14 +109160,14 @@ oropharynx https://upload.wikimedia.org/wikipedia/commons/4/4a/Illu_pharynx.jpg - + - + ISBN:0073040584-table13.1 @@ -109271,7 +109245,7 @@ - + @@ -109295,14 +109269,14 @@ UBERON:0001731 cavity of pharynx - + - + XAO @@ -109401,7 +109375,7 @@ - + The muscular, non-bony arch-shaped posterior portion of the palate extending from the posterior edge of the hard palate. A muscular arch-shaped structure that is composed of the musculus uvuli and parts of tensor veli palatini, levator veli palatini, palatoglossus and palatopharyngeus and attaches to the hard palate and modulates the connections between the oral cavity and pharynx soft tissue arch .[FEED] @@ -109430,7 +109404,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb https://upload.wikimedia.org/wikipedia/commons/8/81/Tonsils_diagram.jpg - + @@ -109443,7 +109417,7 @@ - + MA @@ -109514,7 +109488,7 @@ - + @@ -109546,14 +109520,14 @@ palatine uvula https://upload.wikimedia.org/wikipedia/commons/8/81/Tonsils_diagram.jpg - + - + PMID:1408233 @@ -109655,7 +109629,7 @@ - + @@ -109702,14 +109676,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - + - + FMA-abduced-lr @@ -109785,7 +109759,7 @@ - + @@ -109826,14 +109800,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-female/v1.1/assets/3d-vh-f-larynx.glb https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-male/v1.1/assets/3d-vh-m-larynx.glb - + - + EHDAA2 @@ -109883,7 +109857,7 @@ - + The largest of the laryngeal cartilages. The largest cartilage of the larynx, having two broad processes that join anteriorly to form the Adam's apple. [TFD][VHOG] [In anura] a dorsal pair of arytenoid cartilages (...), which support vocal cords, and a ventral pair (often fused) of cricoid cartilage (...). These cartilages are regarded as derivatives of posterior visceral arches of ancestors. Together they constitute the larynx, a structure characteristic of tetrapods. (...) [In mammals] Paired arytenoid cartilages help support and control the vocal cords. The cricoid cartilage is single. Two additional cartilages are present that are lacking in other vertebrates: a large ventral thyroid cartilage (...) and a cartilage in the epiglottis.[well established][VHOG] @@ -109912,14 +109886,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-female/v1.1/assets/3d-vh-f-larynx.glb https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-male/v1.1/assets/3d-vh-m-larynx.glb - + - + EHDAA2 @@ -110089,7 +110063,7 @@ - + The paired triangular laryngeal cartilages located postlaterally at the level of the thyroid cartilage. Paired, anteroposteriorly elongated cartilages that are associated with the vocal cords. These cartilages are medially separated and hemispherical, and their concave side faces ventromedially.[AAO] AAO:0000674 @@ -110116,14 +110090,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-female/v1.1/assets/3d-vh-f-larynx.glb https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-male/v1.1/assets/3d-vh-m-larynx.glb - + - + cjm @@ -110595,8 +110569,8 @@ - - + + A parenchyma that is part of a thyroid follicle [Automatically generated definition]. BTO:0004579 EMAPA:37769 @@ -110614,24 +110588,24 @@ UBERON:0001747 parenchyma of thyroid gland - + - + - + FMA - + FMA @@ -110765,8 +110739,8 @@ - - + + A parenchyma that is part of a parathyroid gland [Automatically generated definition]. EMAPA:35664 FMA:55569 @@ -110777,24 +110751,24 @@ UBERON:0001749 parenchyma of parathyroid gland - + - + - + FMA - + FMA @@ -110822,15 +110796,15 @@ - - + + - + @@ -110859,34 +110833,34 @@ lacrimal apparatus http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray896.png - + - + - + - + MA - + HPO:pr - + ISBN:0781772214 @@ -110947,7 +110921,7 @@ - + Collagen-rich odontogenic tissue characteristic of teeth and tooth-like skeletal elements (e.g., odontodes); mature dentine is mineralized and develops from predentine tissue; often (but not always) tubular and acellular. Mineralized collagen containing substance that forms the tooth structure.[TAO] Dentine is a bona fide vertebrate novelty, and dentine-secreting odontoblasts represent a cell type that is exclusively derived from the neural crest.[well established][VHOG] @@ -110978,7 +110952,7 @@ . dentine - + @@ -110991,7 +110965,7 @@ - + VSAO @@ -111049,8 +111023,8 @@ - - + + A dentine-like hypermineralized substance that covers the tooth tip. Enamel's primary mineral is hydroxylapatite, which is a crystalline calcium phosphate. Unlike dentin and bone, enamel does not contain collagen. Instead, it has two unique classes of proteins called amelogenins and enamelins[WP]. current classification under substance of tooth may be turned into taxon GCI (e.g. sharks have enamel in dermal denticles) @@ -111080,11 +111054,11 @@ enamel http://upload.wikimedia.org/wikipedia/commons/6/66/Enamelorgan11-17-05.jpg - + - + @@ -111097,13 +111071,13 @@ - + VSAO - + 85 Wikipedia:ENAM @@ -111160,7 +111134,7 @@ - + Odontoid tissue that is deposited by cementoblasts onto dentine tissue and functions to attach teeth, odontodes and other odontogenic derivatives to bone tissue and the integument. Odontoid tissue that is deposited by cementoblasts onto dentine tissue and functions to attach teeth, odontodes and other odontogenic derivatives to bone tissue and the integument.[VSAO] Substance of tooth produced by cementoblasts; surrounds the dentine of the root of the tooth[FMA:55630]. @@ -111187,7 +111161,7 @@ cementum https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg - + @@ -111200,7 +111174,7 @@ - + PMID:19767574 Wikipedia @@ -111265,7 +111239,7 @@ - + The part in the center of a tooth made up of living soft tissue and cells called odontoblasts[WP]. Material in the center of the dentine of the mature tooth. In secondary teeth the pulp contains blood vessels and odontoblast.[TAO] The oral cavity of vertebrates is generally thought to arise as an ectodermal invagination. Consistent with this, oral teeth are proposed to arise exclusively from ectoderm, contributing to tooth enamel epithelium, and from neural crest derived mesenchyme, contributing to dentin and pulp (reference 1); Teeth and tooth-like structures, together named odontodes, are repeated organs thought to share a common evolutionary origin. These structures can be found in gnathostomes at different locations along the body: oral teeth in the jaws, teeth and denticles in the oral-pharyngeal cavity, and dermal denticles on elasmobranch skin (reference 2).[uncertain][VHOG] @@ -111293,7 +111267,7 @@ dental pulp https://upload.wikimedia.org/wikipedia/commons/2/2e/Tooth_Section.svg - + @@ -111306,7 +111280,7 @@ - + ZFA @@ -111612,8 +111586,8 @@ - - + + @@ -111638,11 +111612,11 @@ periodontium https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg - + - + @@ -111655,13 +111629,13 @@ - + cjm - + FMA @@ -111733,7 +111707,7 @@ - + @@ -111796,14 +111770,14 @@ vagus nerve http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png - + - + motor Wikipedia @@ -111982,7 +111956,7 @@ - + A thickened and indented region in the midline in the floor of the rostral part of the pharyngeal region of the foregut, located between the second and third branchial arches that is the first indication of the thyroid primordium. [Kaufman_MH_and_Bard_JBL, The_anatomical_basis_of_mouse_development_(1999)_San_Diego:_Academic_Press, p.132]. foramen caecum foramen cecum @@ -111997,7 +111971,7 @@ future foramen cecum - + @@ -112010,7 +111984,7 @@ - + EHDAA2 @@ -112159,7 +112133,7 @@ - + @@ -112196,14 +112170,14 @@ odontogenic papilla http://upload.wikimedia.org/wikipedia/commons/2/22/Gray1011.png - + - + ZFA @@ -112805,7 +112779,7 @@ - + @@ -112847,14 +112821,14 @@ iris - + - + XAO @@ -112909,7 +112883,7 @@ - + @@ -112936,14 +112910,14 @@ lacrimal canaliculus - + - + FMA @@ -113091,7 +113065,7 @@ - + @@ -113142,14 +113116,14 @@ corneal epithelium http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png - + - + ISBN:0781772214 @@ -113245,16 +113219,16 @@ - - + + - - + + @@ -113295,44 +113269,44 @@ sclera http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + FMA - + ZFA - + ISBN:0781772214 - + cjm ISBN:0781772214 Wikipedia @@ -113385,7 +113359,7 @@ - + A skeletal muscle organ that is part of the trunk region. Note that this class excludes smooth muscle elements in the trunk region, such as the internal anal sphincter. This appears to be consistent with other ontologies such as FMA and ZFA which appear to only include skeletal muscles here. In fact the MA class 'trunk muscle' is classified as a 'set of skeletal muscles'. Many ontologies do not appear to have a coherent distinction between an individual muscle and the musculature (i.e. the set of muscles in a region), so we group all together here. @@ -113409,14 +113383,14 @@ skeletal muscle of trunk - + - + prolog @@ -113488,7 +113462,7 @@ - + @@ -113526,14 +113500,14 @@ ciliary body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + ISBN:0781772214 @@ -113581,14 +113555,14 @@ - + - + @@ -113650,24 +113624,24 @@ optic choroid http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + MA - + Wikipedia @@ -113767,7 +113741,7 @@ - + @@ -113815,14 +113789,14 @@ substantia propria of cornea http://upload.wikimedia.org/wikipedia/commons/6/66/Gray871.png - + - + cjm ISBN:0781772214 Wikipedia @@ -113890,15 +113864,23 @@ - + + + + - - - + + + + + + + + A double layer covering the ciliary body that produces aqueous humor. BTO:0001770 @@ -113917,15 +113899,11 @@ ciliary epithelium - - - - - + - + @@ -113938,19 +113916,13 @@ - - MA - - - - - + MP - + Wikipedia @@ -114271,7 +114243,7 @@ - + @@ -114331,14 +114303,14 @@ pigmented layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + - + Wikipedia @@ -114825,7 +114797,7 @@ - + @@ -114858,14 +114830,14 @@ photoreceptor layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + - + ZFA @@ -115037,7 +115009,7 @@ - + @@ -115083,14 +115055,14 @@ outer nuclear layer of retina - + - + soma ZFA @@ -115427,7 +115399,7 @@ - + @@ -115485,7 +115457,7 @@ ganglionic layer of retina http://upload.wikimedia.org/wikipedia/commons/5/55/Gray881.png - + @@ -115498,7 +115470,7 @@ - + FMA @@ -115574,7 +115546,7 @@ - + @@ -115629,14 +115601,14 @@ nerve fiber layer of retina - + - + FMA @@ -116012,7 +115984,7 @@ - + @@ -116047,14 +116019,14 @@ aqueous humor of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + FMA def states A and P located_in in EHDAA2 VHOG @@ -116242,7 +116214,7 @@ - + @@ -116265,7 +116237,7 @@ vitreous body http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + @@ -116278,7 +116250,7 @@ - + neural ectoderm of optic cup ISBN:0781772214 @@ -116470,7 +116442,7 @@ - + @@ -116502,14 +116474,14 @@ anterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/b/ba/Cataract_in_human_eye.png - + - + cjm @@ -116560,7 +116532,7 @@ - + @@ -116589,14 +116561,14 @@ posterior segment of eyeball http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + cjm @@ -116750,7 +116722,6 @@ - @@ -116776,7 +116747,7 @@ - + The elastic, clear, membrane-like structure, that is outer most layer of the lens. The transparent membrane which surrounds the lens of the eye. [Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier][VHOG] (...) we reach the inescapable conclusion that the last common ancestor of jawless and jawed vertebrates already possessed an eye that was comparable to that of extant lampreys and gnathostomes. Accordingly, a vertebrate camera-like eye must have been present by the time that lampreys and gnathostomes diverged, around 500 Mya (reference 1); Although the eye varies greatly in adaptative details among vertebrates, its basic structure is the same in all. The human eye is representative of the design typical for a tetrapod. (...) A watery aqueous humor fills the spaces in the eye in front of the lens (...) (reference 2).[well established][VHOG] @@ -116801,14 +116772,14 @@ capsule of lens http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png - + - + EHDAA2 @@ -116975,7 +116946,7 @@ - + @@ -117013,14 +116984,14 @@ sympathetic ganglion http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png - + - + DOI:10.1101/gr.157586.113 ISBN:0073040584 @@ -117315,12 +117286,6 @@ enteric ganglion - - - - - FMA - @@ -117346,8 +117311,8 @@ - - + + Anatomical junction where subdivisions of two or more neural trees interconnect with one another to form a network through which nerve fibers of the constituent nerve trees become regrouped; together with other nerve plexuses, nerves and ganglia, it constitutes the peripheral nervous system. Examples: cervical nerve plexus, brachial nerve plexus, sacral nerve plexus[FMA]. Made to be a subtype of junction rather than tissue to be consistent with FMA @@ -117368,24 +117333,24 @@ nerve plexus - + - + - + AEO - + AEO @@ -117421,9 +117386,9 @@ - - - + + + @@ -117471,15 +117436,15 @@ conjunctiva http://upload.wikimedia.org/wikipedia/commons/5/55/Gray883.png - + - + - + @@ -117492,19 +117457,19 @@ - + cjm - + MA - + ISBN:0781772214 @@ -117555,7 +117520,7 @@ - + @@ -117583,7 +117548,7 @@ lines the eyeballs palpebral conjunctiva - + @@ -117596,7 +117561,7 @@ - + FMA MA @@ -118250,8 +118215,8 @@ - - + + @@ -118288,25 +118253,25 @@ sweat gland http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg - + - + - + coiled tubular Wikipedia:Tubular_gland - + definitional @@ -118375,7 +118340,7 @@ - + @@ -118411,7 +118376,7 @@ sebaceous gland http://upload.wikimedia.org/wikipedia/commons/4/49/HairFollicle.png - + @@ -118424,7 +118389,7 @@ - + definitional @@ -118952,14 +118917,14 @@ - + - + @@ -119005,24 +118970,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb https://upload.wikimedia.org/wikipedia/commons/2/2e/Tooth_Section.svg - + - + - + Carranza - + ISBN:0013002015 @@ -119153,7 +119118,7 @@ - + @@ -119194,14 +119159,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - + - + FMA-abduced-lr @@ -119360,14 +119325,14 @@ - + - + @@ -119404,11 +119369,11 @@ http://upload.wikimedia.org/wikipedia/commons/9/90/Lips.JPG http://upload.wikimedia.org/wikipedia/commons/9/99/Mouth.jpg - + - + @@ -119421,7 +119386,7 @@ - + BTO FMA-implicit VHOG @@ -119430,7 +119395,7 @@ - + cjm @@ -119863,8 +119828,8 @@ - - + + @@ -119895,25 +119860,25 @@ bony labyrinth http://upload.wikimedia.org/wikipedia/commons/2/22/Gray920.png - + - + - + FMA MA - + FMA @@ -119942,7 +119907,7 @@ - + @@ -119983,7 +119948,7 @@ semicircular canal http://upload.wikimedia.org/wikipedia/commons/3/33/Balance_Disorder_Illustration_A.png - + @@ -119996,7 +119961,7 @@ - + OG @@ -120273,7 +120238,7 @@ - + @@ -120325,14 +120290,14 @@ http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg - + - + FMA VHOG XAO @@ -120424,7 +120389,7 @@ - + Transudate contained in the osseous labyrinth outside the membranous labyrinth.[FMA]. EMAPA:36549 FMA:60908 @@ -120444,14 +120409,14 @@ perilymph - + - + Wikipedia @@ -120493,7 +120458,7 @@ - + Complex labyrinthine structure that comprises sensory endorgans specialized for vestibular, auditory, and acoustico-vestibular sensation. The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)[TAO] The labyrinth, or inner ear, evolved very early in vertebrate history and, with many variations in configuration but none of basic design and function, has been retained by all vertebrates.[well established][VHOG] @@ -120535,14 +120500,14 @@ internal ear http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png - + - + definitional @@ -120734,7 +120699,7 @@ - + @@ -120772,14 +120737,14 @@ membranous labyrinth http://upload.wikimedia.org/wikipedia/commons/8/8c/Gray924.png - + - + FMA MA @@ -120837,7 +120802,7 @@ - + @@ -120870,7 +120835,7 @@ lacrimal drainage system - + @@ -120883,7 +120848,7 @@ - + FMA @@ -121225,7 +121190,7 @@ - + An endolymph filled cavity inside the cochlea, located in between the scala tympani and the scala vestibuli, separated by the basilar membrane and Reissner's membrane (the vestibular membrane) respectively. Houses the organ of Corti[WP]. TODO - check cochlear duct vs cochlear aqueduct vs scala media The coiled portion of the membranous labyrinth located inside the cochlea. It contains endolymph. [TFD][VHOG] @@ -121262,14 +121227,14 @@ cochlear duct of membranous labyrinth http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png - + - + FMA MA @@ -121369,8 +121334,8 @@ - - + + Any of the three loop-shaped membranous inner tubular parts of the semicircular canals that are about one-fourth the diameter of the corresponding outer bony canals, that communicate at each end with the utricle, and that have near one end an expanded ampulla containing an area of sensory epithelium. TODO - check canal vs duct. see Wikipedia:File:Gray927.png In gnathostomes, each membranous labyrinth has three semicircular ducts that connect with a chamber known as the utriculus (...); Gnathostome ears have a horizontal semicircular duct. This brings their complement to three semicircular ducts, a pattern retained throughout gnathostome evolution.[well established][VHOG] @@ -121387,24 +121352,24 @@ UBERON:0001856 semicircular duct - + - + - + MA - + FMA MA @@ -121706,9 +121671,9 @@ - - - + + + The canalis reuniens of Hansen is part of the human inner ear. It connects the lower part of the saccule to the ductus cochlearis near its vestibular extremity. EMAPA:17287 FMA:61252 @@ -121723,34 +121688,34 @@ UBERON:0001861 ductus reuniens - + - + - + - + EMAPA - + Wikipedia - + Wikipedia @@ -121862,7 +121827,7 @@ - + @@ -121889,7 +121854,7 @@ http://upload.wikimedia.org/wikipedia/commons/0/0c/Cochlea-crosssection.png http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png - + @@ -121902,7 +121867,7 @@ - + FMA @@ -121927,7 +121892,7 @@ - + @@ -121954,7 +121919,7 @@ scala tympani http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png - + @@ -121967,7 +121932,7 @@ - + FMA @@ -122278,7 +122243,7 @@ - + One of two bilateral, largely symmetrical organ subdivisions within the telencephalon which contain the cerebral cortex and cerebral white matter.[FMA]. Part of the telencephalon consisting of either of the two smooth, elongated halves of the cerebrum.[AAO] The presence of paired evaginated hemispheres and olfactory bulbs in both agnathan and gnathostome radiations suggests that such hemispheres were also present in the common ancestor.[well established][VHOG] @@ -122315,14 +122280,14 @@ cerebral hemisphere http://upload.wikimedia.org/wikipedia/commons/9/92/Hemispheres.png - + - + FMA-abduced-lr @@ -122688,7 +122653,7 @@ - + @@ -122735,14 +122700,14 @@ caudate nucleus http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg - + - + MA @@ -122797,7 +122762,7 @@ - + @@ -122844,14 +122809,14 @@ putamen http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg - + - + FMA @@ -122902,9 +122867,9 @@ - - - + + + @@ -122948,34 +122913,34 @@ globus pallidus https://upload.wikimedia.org/wikipedia/commons/e/ee/Brain_structure.gif - + - + - + - + MA - + BTO-weakened - + GO ISBN:1588900649 @@ -123051,8 +123016,8 @@ - - + + Subcortical brain region lying anterior to the hippocampal formation in the temporal lobe and anterior to the temporal horn of the lateral ventricle in some species. It is usually subdivided into several groups. Functionally, it is not considered a unitary structure (MM). Subdivision of basal ganglion of telencephalon which is an almond-shaped gray mass in the dorsomedial part of the temporal lobe[FMA:61841] @@ -123107,11 +123072,11 @@ amygdala http://upload.wikimedia.org/wikipedia/commons/8/8b/Amyg.png - + - + @@ -123124,13 +123089,13 @@ - + FMA - + BTO @@ -123343,7 +123308,7 @@ - + BAMS:SF @@ -123366,14 +123331,14 @@ UBERON:0001878 septofimbrial nucleus - + - + NIFSTD @@ -123426,7 +123391,7 @@ - + A brain structure that is part of the septal nuclear complex. It is connected with the hippocampus, hypothalamus and amygdala. BAMS:DB BAMS:NDB @@ -123454,14 +123419,14 @@ UBERON:0001879 nucleus of diagonal band - + - + MA @@ -123522,7 +123487,7 @@ - + @@ -123571,14 +123536,14 @@ bed nucleus of stria terminalis - + - + EMAPA FMA @@ -123793,14 +123758,14 @@ - + - + @@ -123849,25 +123814,25 @@ nucleus accumbens http://upload.wikimedia.org/wikipedia/commons/9/93/Circuit_du_syst%C3%A8me_de_recompense.jpg - + - + - + FMA GO - + MA @@ -123945,7 +123910,7 @@ - + @@ -123984,14 +123949,14 @@ olfactory tubercle http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png - + - + EHDAA2-inferred MA VHOG @@ -124139,7 +124104,7 @@ - + Part of the hippocampal formation forming a 'V' or 'U' shaped structure with the opening bounded by hippocampal area CA3. It consists of 3 layers from superficial to deep: molecular, granule cell and polymorphic or hilar layer. @@ -124180,14 +124145,14 @@ dentate gyrus of hippocampal formation http://upload.wikimedia.org/wikipedia/commons/a/ab/HippocampalRegions.jpg - + - + MA @@ -124655,7 +124620,7 @@ - + The most anterior region of the brain including both the telencephalon and diencephalon. @@ -124701,14 +124666,14 @@ forebrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -124784,14 +124749,14 @@ - + - + The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. developmental relationships need revised @@ -124843,24 +124808,24 @@ midbrain http://upload.wikimedia.org/wikipedia/commons/f/f9/Human_brain_inferior_view_description.JPG - + - + - + definitional - + Bgee:AN @@ -125075,7 +125040,7 @@ - + Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres. Organ component of neuraxis that has as its parts the cerebral cortex, cerebral white matter, basal ganglia, septum and fornix, as well as subcortical gray and white matter structures[FMA:62000]. @@ -125134,14 +125099,14 @@ telencephalon - + - + Bgee:AN @@ -125285,14 +125250,14 @@ - + - + The division of the forebrain that develops from the foremost primary cerebral vesicle. @@ -125356,24 +125321,24 @@ diencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + - + definitional - + definitional @@ -125504,7 +125469,7 @@ - + Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified]. Anterior part of the hindbrain ventral to the cerebellum[BIRNLEX:965]. @@ -125539,14 +125504,14 @@ metencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -125790,7 +125755,7 @@ - + @@ -125846,14 +125811,14 @@ dorsal plus ventral thalamus http://upload.wikimedia.org/wikipedia/commons/c/ce/Brain_chrischan_thalamus.jpg - + - + FMA-abduced-lr @@ -125966,8 +125931,8 @@ - - + + @@ -126031,18 +125996,18 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + - + FMA EHDAA2 Wikipedia @@ -126050,7 +126015,7 @@ - + WP @@ -126567,7 +126532,7 @@ - + An epithelium that is part of a small intestine [Automatically generated definition]. Intestinal epithelium which lines the lumen of the mid intestine.[TAO] BTO:0001258 @@ -126591,14 +126556,14 @@ epithelium of small intestine - + - + FMA @@ -126945,7 +126910,7 @@ - + @@ -126958,7 +126923,7 @@ - + @@ -127033,11 +126998,11 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + @@ -127050,14 +127015,14 @@ - + ZFA various - + EDITOR_NOTE add secretion @@ -127212,7 +127177,7 @@ - + @@ -127268,14 +127233,14 @@ subthalamic nucleus http://upload.wikimedia.org/wikipedia/commons/3/33/Basal-ganglia-coronal-sections-large.png - + - + part of hypothalamus in ABA @@ -127597,8 +127562,8 @@ - - + + @@ -127636,11 +127601,11 @@ habenular commissure http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png - + - + @@ -127653,13 +127618,13 @@ - + FMA - + ZFA-modified @@ -127735,7 +127700,7 @@ - + The Medial forebrain bundle (MFB), is a complex bundle of axons coming from the basal olfactory regions, the periamygdaloid region, and the septal nuclei, and passing to the lateral hypothalamus, with some carrying on into the tegmentum. It contains both ascending and descending fibers. It also represents a part of the mesolimbic pathway, carrying information between the ventral tegmentum and the nucleus accumbens. It is commonly accepted that the MFB is a part of the reward system, involved in the integration of reward and pleasure. Electrical stimulation of the medial forebrain bundle is believed to cause sensations of pleasure. This hypothesis is based upon intracranial self-stimulation (ICSS) studies. Animals will work for MFB ICSS, and humans report that MFB ICSS is intensely pleasurable. This is most likely because the medial forebrain bundle carries information from the ventral tegmental area (VTA) to the nucleus accumbens (nAcc or Acb). The nAcc is a recognized reward center, and activation of the pathway from the VTA to the nAcc is believed to be rewarding, which is why it is sometimes referred to as the hedonic highway. [WP,unvetted]. a pathway in NCIT @@ -127767,14 +127732,14 @@ medial forebrain bundle - + - + NIFSTD @@ -128564,7 +128529,7 @@ - + @@ -128604,14 +128569,14 @@ paraventricular nucleus of thalamus http://upload.wikimedia.org/wikipedia/en/thumb/e/ef/PVNss.jpg/200px-PVNss.jpg - + - + FMA @@ -128693,7 +128658,7 @@ - + Re BAMS:RE @@ -128720,14 +128685,14 @@ reuniens nucleus - + - + NIFSTD @@ -128801,7 +128766,7 @@ - + @@ -128842,14 +128807,14 @@ parafascicular nucleus - + - + FMA @@ -128940,7 +128905,7 @@ - + @@ -128980,14 +128945,14 @@ central medial nucleus - + - + NIFSTD @@ -129077,7 +129042,7 @@ - + @@ -129121,14 +129086,14 @@ paracentral nucleus - + - + NIFSTD @@ -129234,7 +129199,7 @@ - + The ventral lateral nucleus (VL) is a nucleus of the thalamus. [WP,unvetted]. VL @@ -129279,14 +129244,14 @@ ventral lateral nucleus of thalamus http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + FMA @@ -129425,7 +129390,7 @@ - + @@ -129473,14 +129438,14 @@ lateral geniculate body http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png - + - + FMA @@ -129589,8 +129554,8 @@ - - + + @@ -129639,24 +129604,24 @@ medial geniculate body http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + - + NIFSTD - + FMA @@ -129887,10 +129852,10 @@ - - - - + + + + @@ -129940,45 +129905,45 @@ http://upload.wikimedia.org/wikipedia/commons/d/d7/SONss.jpg http://upload.wikimedia.org/wikipedia/en/thumb/d/d7/SONss.jpg/200px-SONss.jpg - + - + - + - + - + ABA MA - + FMA - + Wikipedia - + Wikipedia @@ -130245,7 +130210,7 @@ - + The lateral preoptic nucleus is lateral to the medial preoptic nucleus. It also mediates non-REM sleep onset.[WP,unvetted]. @@ -130280,14 +130245,14 @@ lateral preoptic nucleus http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + - + GO @@ -130406,7 +130371,7 @@ - + The arcuate nucleus (or infundibular nucleus) is an aggregation of neurons in the mediobasal hypothalamus, adjacent to the third ventricle and the median eminence. The arcuate nucleus includes several important populations of neurons, including: Neuroendocrine neurons, Centrally-projecting neurons and Others. [WP,unvetted]. @@ -130451,14 +130416,14 @@ arcuate nucleus of hypothalamus http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + - + NIFSTD @@ -130566,7 +130531,7 @@ - + @@ -130590,14 +130555,14 @@ UBERON:0001933 retrochiasmatic area - + - + FMA NIFSTD @@ -130690,9 +130655,9 @@ - - - + + + The Dorsomedial hypothalamic nucleus is a nucleus of the hypothalamus. It is involved in feeding, drinking, and body weight regulation. [WP,unvetted]. @@ -130733,15 +130698,15 @@ dorsomedial nucleus of hypothalamus http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + - + - + @@ -130754,19 +130719,19 @@ - + MA - + FMA - + Wikipedia @@ -130872,7 +130837,7 @@ - + The ventromedial nucleus (sometimes referred to as the ventromedial hypothalamus) is a nucleus of the hypothalamus. [WP,unvetted]. @@ -130912,7 +130877,7 @@ ventromedial nucleus of hypothalamus http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + @@ -130925,7 +130890,7 @@ - + FMA @@ -131034,8 +130999,8 @@ - - + + The tuberomammillary nucleus is a subnucleus of the posterior third of the hypothalamus. It consists of, largely, histaminergic and is involved with the control of arousal, sleep and circadian rhythm. Axons of the tuberomammillary nucleus project primarily to the cerebral cortex, thalamus, basal ganglia, basal forebrain, and hypothalamus. The projections to the cerebral cortex directly increase cortical activation and arousal, and projections to acetylcholinergic neurons of the basal forebrain and dorsal pons do so indirectly, by increasing the release of acetylcholine in the cerebral cortex. [WP,unvetted]. @@ -131071,24 +131036,24 @@ tuberomammillary nucleus - + - + - + MA - + FMA @@ -131896,7 +131861,7 @@ - + Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. Together, our results reveal a shared basic organization in the tegmental domains of the diencephalon and midbrain of developing lamprey, indicating early appearance of the domain in vertebrate phylogeny.[well established][VHOG] @@ -131936,14 +131901,14 @@ midbrain tegmentum http://upload.wikimedia.org/wikipedia/commons/b/b6/Gray712.png - + - + ZFA @@ -132036,7 +132001,7 @@ - + Nuclear complex between dorsal thalamus and optic tectum whose nuclei receive afferents primarily from the retina and the optic tectum and are involved in modulating motor behavior in response to visual input. @@ -132095,7 +132060,7 @@ pretectal region - + @@ -132108,7 +132073,7 @@ - + ISBN:0471888893 @@ -132274,7 +132239,7 @@ - + Part of the midbrain tecturm consisting of paired bodies that sit caudal to the thalamus and surround the pineal gland in the mesencephalon of vertebrate brains. It comprises the rostral aspect of the midbrain, posterior to the periaqueductal gray and adjacent superior the inferior colliculus. The inferior and superior colliculi are known collectively as the corpora quadrigemina (Latin, quadruplet bodies). It consists of several identified cellular layers and also comprises the brachium of the superior colliculus and commissure of supeior colliculus from Wikipedia.org and Neuronames (MM). @@ -132336,14 +132301,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + FMA-abduced-lr @@ -132480,7 +132445,7 @@ - + Part of the midbrain tectum, consisting of paired predominantly gray matter elevations on the dorsal aspect of the midbrain, located caudal to the superior colliculus, dorsal to the periaqueductal gray of the cerebral aqueduct and rostral to the cerebellum. According to Neuronames, the inferior colliculus comprises the central, pericentral and external nucleus and two predominantly white matter structures, the brachium of the inferior colliculus and the commissure of the inferior colliculus (MM). BAMS:IC @@ -132518,14 +132483,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + FMA-abduced-lr @@ -132597,8 +132562,8 @@ - - + + @@ -132655,24 +132620,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + - + FMA - + ISBN:0471888893 @@ -133090,7 +133055,7 @@ - + An epithelium that is part of a nasopharynx [Automatically generated definition]. UBERON:0003237 BTO:0004480 @@ -133118,14 +133083,14 @@ UBERON:0001951 epithelium of nasopharynx - + - + EHDAA2 @@ -133231,7 +133196,7 @@ - + An epithelium that is part of a oropharynx [Automatically generated definition]. Composition varies with species and time. This is classified as nonkeratinizing stratified squamous in FMA, unilaminar in EHDAA2; the majority of the pharyngeal epithelium is unilaminar in zebrafish EHDAA2:0004083 @@ -133246,14 +133211,14 @@ UBERON:0001952 epithelium of oropharynx - + - + EHDAA2 @@ -133299,8 +133264,8 @@ - - + + A modified six-layered cortex between the subiculum and the main part of the parahippocampal gyrus. consider merging with BA27 @@ -133328,24 +133293,24 @@ presubiculum http://upload.wikimedia.org/wikipedia/commons/5/5f/Brodmann_Cytoarchitectonics_27.png - + - + - + NIFSTD - + FMA @@ -133417,10 +133382,10 @@ - - - - + + + + A part of the brain consisting of a three layered cortex located in the forebrain bordering the medial surface of the lateral ventricle. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum. @@ -133472,44 +133437,44 @@ Ammon's horn http://upload.wikimedia.org/wikipedia/commons/2/2e/Gray739-emphasizing-hippocampus.png - + - + - + - + - + FMA - + ABA - + FMA - + Wikipedia @@ -133719,7 +133684,7 @@ - + The hyaline cartilaginous structures that support the bronchi, present as irregular rings in the larger bronchi (and not as regular as in the trachea), and as small plates and islands in the smaller bronchi; as the branching continues through the bronchial tree, the amount of hyaline cartilage in the walls decreases until it is absent in the smallest bronchioles[MP]. @@ -133742,14 +133707,14 @@ cartilage of bronchus - + - + MP @@ -134318,7 +134283,7 @@ - + A diffuse collection of lymphpoid cells that participate in airway immune responses. FMA:62821 MA:0000135 @@ -134331,14 +134296,14 @@ Lymphoid tissue associated with airways in mice has functional similarities to human BALT[ISBN:0123813611] Notes: FMA classifies this as organized, not diffuse bronchial-associated lymphoid tissue - + - + ISBN:0123813611 @@ -135067,7 +135032,7 @@ - + @@ -135125,14 +135090,14 @@ bile - + - + 0.3% in humans @@ -135351,7 +135316,7 @@ - + A lamina propria that is part of a esophagus [Automatically generated definition]. EMAPA:26987 FMA:63050 @@ -135379,14 +135344,14 @@ UBERON:0001974 lamina propria of esophagus - + - + FMA @@ -135617,7 +135582,7 @@ - + @@ -135657,14 +135622,14 @@ epithelium of esophagus - + - + FMA @@ -136024,8 +135989,8 @@ - - + + @@ -136038,7 +136003,7 @@ - + @@ -136096,34 +136061,34 @@ blood vessel http://upload.wikimedia.org/wikipedia/commons/2/29/Circulatory_System_en.svg - + - + - + - + AEO - + EHDAA2 - + GO:0072360 @@ -136307,8 +136272,8 @@ - - + + @@ -136345,24 +136310,24 @@ http://upload.wikimedia.org/wikipedia/commons/3/38/Small_intestine_low_mag.jpg - + - + - + Wikipedia:Tubular_gland - + further investigation required ISBN:9780521617147 @@ -136693,9 +136658,9 @@ - - - + + + Organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin[GO]. The fetal portion of the placenta is known as the villous chorion. The maternal portion is known as the decidua basalis. The two portions are held together by anchoring villi that are anchored to the decidua basalis by the cytotrophoblastic shell. Phylogenetic analyses of the concatenated data set using maximum parsimony, maximum likelihood and distance based (neighbour joining) methods all converged on a nearly identical, well supported topology defining four principal eutherian lineages. The results affirm monophyly of traditional placental orders (except Artiodactyla and Insectivora), and also support some previously proposed, as well as new, superordinal clades.[well established][VHOG] @@ -136731,34 +136696,34 @@ http://upload.wikimedia.org/wikipedia/commons/f/f1/Placenta.svg https://cdn.humanatlas.io/digital-objects/ref-organ/placenta-full-term-female/v1.1/assets/3d-vh-f-placenta-full-term.glb - + - + - + - + ISBN:0073040584 - + Wikipedia - + ISBN:0073040584 @@ -137093,8 +137058,8 @@ - - + + The upper layer of the dermis beneath the epidermis, composed of dense irregular connective tissue[ncit,modified]. todo - check tissue composition Dense irregular connective tissue of the skin that consists of fibroblasts, various connective tissue cell types, and collagen, predominantly type III. @@ -137125,24 +137090,24 @@ papillary layer of dermis http://upload.wikimedia.org/wikipedia/commons/b/b4/Normal_Epidermis_and_Dermis_with_Intradermal_Nevus_10x.JPG - + - + - + WP - + FMA-text @@ -137254,7 +137219,7 @@ - + @@ -137288,14 +137253,14 @@ reticular layer of dermis - + - + FMA @@ -137351,7 +137316,7 @@ - + Cartilage tissue primarily composed of type II collagen (thin fibrils) and a glassy appearance. Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which is an amorphous gel with a perichondrium[FMA:64783]. Cartilage tissue primarily composed of type II collagen (thin fibrils) and a glassy appearance.[VSAO] @@ -137373,7 +137338,7 @@ http://upload.wikimedia.org/wikipedia/commons/2/2a/Gray292.png http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg - + @@ -137386,7 +137351,7 @@ - + VSAO-text-def @@ -137530,14 +137495,14 @@ - + - + Cartilage tissue that is flexible and contains abundant elastic fibers. Cartilage (tissue) which consists of chondrocytes and collagen, the intercellular matrix of which consists of elastic fibers[FMA:64785]. Cartilage tissue that is flexible and contains abundant elastic fibers.[VSAO] @@ -137562,11 +137527,11 @@ elastic cartilage tissue http://upload.wikimedia.org/wikipedia/commons/c/ca/Gray904.png - + - + @@ -137579,13 +137544,13 @@ - + Wikipedia - + VSAO @@ -137674,16 +137639,16 @@ - + - - - + + + @@ -137702,7 +137667,7 @@ - + A sensory epithelium inside the nasal cavity that is responsible for detecting odors[WP]. Sensory lining of the medial wall, roof and anterior aspects of the main olfactory cavity (cavum principale).[AAO] relationship loss: part_of principal cavity (AAO:0000992)[AAO] @@ -137744,54 +137709,54 @@ olfactory epithelium http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray857.png - + - + - + - + - + - + NIFSTD - + NBK26868 - + NBK26868 - + NBK26868 - + NCBIBook:NBK55982 @@ -137970,11 +137935,11 @@ - - - - - + + + + + @@ -138004,55 +137969,55 @@ https://github.com/obophenotype/uberon/issues/478 http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + - + - + - + - + dbpedia - + dbpedia - + dbpedia - + lesser trochanter of femur dbpedia - + dbpedia @@ -138116,7 +138081,7 @@ - + On of the muscles that make up the buttocks: the gluteus maximus muscle, gluteus medius muscle and gluteus minimus muscle. gluteal @@ -138138,14 +138103,14 @@ gluteal muscle - + - + EHDAA2 @@ -138190,7 +138155,7 @@ - + @@ -138207,14 +138172,14 @@ UBERON:0002001 joint of rib - + - + cjm @@ -138425,8 +138390,8 @@ - - + + @@ -138461,11 +138426,11 @@ enteric nervous system - + - + @@ -138478,7 +138443,7 @@ - + FMA MA NIF @@ -138487,7 +138452,7 @@ - + Wikipedia ZFA https://github.com/obophenotype/uberon/wiki/The-neural-crest @@ -138771,7 +138736,7 @@ - + @@ -138800,14 +138765,14 @@ pulmonary nerve plexus - + - + FMA @@ -139022,9 +138987,9 @@ - - - + + + @@ -139071,35 +139036,35 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png - + - + - + - + Wikipedia - + EHDAA2 XAO - + EHDAA2 @@ -139622,14 +139587,14 @@ - + - + Soft tissue that lines the non-cartilaginous surfaces within joints with cavities (synovial joints). Phylogenetically, synovium is one of the newer attributes of the vertebrate locomotor apparatus. The first synovial joints developed in the piscine jaw of ancestors of modern lungfish by an evolutionary process that modified preexisting fibrous and cartilaginous joints, which were the predominant articulation of the early sea- and land-dwelling vertebrates.[well established][VHOG] synovial layer @@ -139665,11 +139630,11 @@ http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png http://upload.wikimedia.org/wikipedia/commons/5/5d/Synovium.png - + - + @@ -139682,13 +139647,13 @@ - + EHDAA2 - + GAID @@ -140219,7 +140184,7 @@ - + Gray matter of the insular region of the neocortex. In gyrencephalic animals, it is part of the insular lobe and lies in the depths of the lateral fissure and covered by portions of the frontal, parietal and temporal lobes. It includes Brodmann areas 13-16. Consider splitting insular cortex from insular lobe. See https://github.com/obophenotype/uberon/issues/412 @@ -140262,14 +140227,14 @@ insula http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray731.png - + - + BTO NIF @@ -140410,8 +140375,8 @@ - - + + One of the four basal ganglia in each cerebral hemisphere that consists of a thin lamina of gray matter between the lentiform nucleus and the insula[BTO]. The claustrum, which is suspected to be present in all mammals, is a fairly thin (fraction of 1 mm to multiple mms) vertical curved sheet of subcortical gray matter oriented sagittally between the white matter tracts of the external capsule and extreme capsule. The claustrum is lateral to the putamen and medial to the insular cortex and is considered by some sources to be part of the basal ganglia. There are lateral and medial tracts connecting to many cortices and perhaps to the hippocampus, the amygdala, and the caudate nucleus (connections with subcortical centers are a matter of debate)[WP]. @@ -140448,11 +140413,11 @@ claustrum of brain http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg - + - + @@ -140465,13 +140430,13 @@ - + ISBN:0471888893 - + NIF @@ -140854,7 +140819,7 @@ - + @@ -140896,14 +140861,14 @@ http://upload.wikimedia.org/wikipedia/commons/2/20/Skinlayers.png https://upload.wikimedia.org/wikipedia/commons/e/e4/Epidermal_layers.png - + - + FMA @@ -140955,14 +140920,14 @@ - + - + The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. @@ -141012,25 +140977,25 @@ hindbrain http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + - + modified-source-relation ABA - + Bgee:AN @@ -141242,7 +141207,7 @@ - + Projection of skin containing the outlets for 15-20 lactiferous ducts arranged cylindrically around the tip. a male mouse has no nipples - mammary tissue regresses during embryonic development FMA makes this part of the breast, whereas in MA it is part of the mammary gland - @@ -141273,14 +141238,14 @@ https://github.com/obophenotype/uberon/issues/1873 http://upload.wikimedia.org/wikipedia/commons/5/59/Female_nipple_profile.jpg - + - + Stedmans @@ -141351,7 +141316,7 @@ - + @@ -141384,14 +141349,14 @@ epithelium of bronchus - + - + FMA @@ -141473,7 +141438,7 @@ - + @@ -141496,14 +141461,14 @@ http://upload.wikimedia.org/wikipedia/commons/f/f4/Brustwarze.JPG https://upload.wikimedia.org/wikipedia/commons/a/ad/Female_Areola.jpg - + - + MA @@ -141538,7 +141503,7 @@ - + @@ -141569,7 +141534,7 @@ arrector muscle of hair - + @@ -141582,7 +141547,7 @@ - + FMA @@ -141845,7 +141810,7 @@ - + The medial preoptic nucleus is bounded laterally by the lateral preoptic nucleus, and medially by the preoptic periventricular nucleus. It releases gonadotropin-releasing hormone, controls copulation in males, and is larger in males than in females.[WP,unvetted]. @@ -141878,14 +141843,14 @@ medial preoptic nucleus http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + - + MA @@ -142060,8 +142025,8 @@ - - + + @@ -142130,25 +142095,25 @@ cerebellum https://upload.wikimedia.org/wikipedia/commons/a/a7/Cerebellum_NIH.png - + - + - + FMA MA - + definitional @@ -142281,8 +142246,8 @@ - - + + @@ -142338,24 +142303,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + - + NIF - + FMA-abduced-lr @@ -142603,7 +142568,7 @@ - + @@ -142634,14 +142599,14 @@ lymphatic vessel endothelium - + - + FMA @@ -142696,7 +142661,7 @@ - + A large raphe nucleus extending from the anterior part of the pons through the mesencephalon; its neurons are serotoninergic[NIF]. The dorsal raphe nucleus is a part of the raphe nucleus and consists of rostral and caudal subdivisions. The rostral aspect of the dorsal raphe is further divided into interfascicular, ventral, ventrolateral and dorsal subnuclei. The projections of the dorsal raphe have been found to vary topographically, and thus the subnuclei differ in their projections. An increased number of cells in the lateral aspects of the dorsal raphe is characteristic of humans and other primates. [WP,unvetted]. TODO check dorsal vs inferior. ZF has no pons. @@ -142740,14 +142705,14 @@ http://upload.wikimedia.org/wikipedia/commons/c/c6/Drn.png http://upload.wikimedia.org/wikipedia/en/thumb/c/c6/Drn.png/200px-Drn.png - + - + Wikipedia @@ -142898,7 +142863,7 @@ - + Dk BAMS:Dk @@ -142929,14 +142894,14 @@ UBERON:0002044 ventral nucleus of posterior commissure - + - + FMA @@ -143175,8 +143140,8 @@ - - + + @@ -143222,24 +143187,24 @@ http://upload.wikimedia.org/wikipedia/commons/a/a3/Illu_thyroid_parathyroid.jpg http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg - + - + - + Wikipedia - + Wikipedia @@ -143319,7 +143284,7 @@ - + The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted]. @@ -143348,14 +143313,14 @@ pontine raphe nucleus - + - + Wikipedia @@ -143783,7 +143748,7 @@ - + @@ -143815,14 +143780,14 @@ epithelium of bronchiole - + - + FMA @@ -143927,7 +143892,7 @@ - + @@ -143960,7 +143925,7 @@ zona glomerulosa of adrenal gland http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png - + @@ -143973,7 +143938,7 @@ - + FMA @@ -144003,8 +143968,8 @@ - - + + @@ -144029,11 +143994,11 @@ zona fasciculata of adrenal gland http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png - + - + @@ -144046,13 +144011,13 @@ - + FMA - + FMA @@ -144081,8 +144046,8 @@ - - + + @@ -144107,11 +144072,11 @@ zona reticularis of adrenal gland http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray1185.png - + - + @@ -144124,13 +144089,13 @@ - + FMA - + FMA @@ -144287,7 +144252,7 @@ - + @@ -144320,14 +144285,14 @@ main ciliary ganglion http://upload.wikimedia.org/wikipedia/commons/3/30/Augennerven.jpg - + - + http://orcid.org/0000-0001-9114-8737 inferred @@ -144483,7 +144448,7 @@ - + The femoral artery is a large artery in the muscles of the thigh. It is a continuation of external iliac artery where it enters the femoral triangle at the mid inguinal point behind the inguinal ligament. It leaves femoral triangle through apex beneath the sartorius muscle. It enters the popliteal fossa by passing through the 5th osseo-aponeurotic(adductor hiatus) opening of adductor magnus where it becomes the Popliteal Artery. [WP,unvetted]. Artery which supplies blood via branches to the hindlimbs.[AAO] AAO:0010222 @@ -144505,14 +144470,14 @@ femoral artery http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray546.png - + - + FMA WP @@ -144553,9 +144518,9 @@ - - - + + + The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles. assume spelling error for ncit EHDAA2:0004143 @@ -144572,15 +144537,15 @@ truncus arteriosus - + - + - + @@ -144599,19 +144564,19 @@ - + MA - + EHDAA2 - + EHDAA2 @@ -144642,7 +144607,7 @@ - + The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves.[TAO] relationship loss: develops_from endocardial ring (TAO:0005072)[TAO] @@ -144673,14 +144638,14 @@ endocardial cushion http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png - + - + ZFA @@ -144763,8 +144728,8 @@ - - + + The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart. Heart region collecting blood from the paired common cardinal veins and delivering to the atrium. One of four components of the heart. The sinus venosus also acts as a pacemaker and is the first to contract. Kimmel et al, 1995.[TAO] @@ -144799,24 +144764,24 @@ sinus venosus http://upload.wikimedia.org/wikipedia/commons/c/c7/Gray465.png - + - + - + VHOG - + Bgee:AN @@ -145214,7 +145179,7 @@ - + @@ -145245,7 +145210,7 @@ - + The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]. Consider adding a layer-of-skin grouping class for all skin layers @@ -145284,24 +145249,24 @@ dermis http://upload.wikimedia.org/wikipedia/commons/2/23/EpidermisPainted.svg - + - + - + FMA - + definitional @@ -145357,14 +145322,14 @@ - + - + A fibrous remnant of the allantoic stalk, a narrow fetal canal connecting the apex of the urinary bladder with the umbilicus located in the space of Retzius, between the transversalis fascia anteriorly and the peritoneum posteriorly. its lumen is normally obliterated during development, transforming the urachus into a solid cord, a functionless remnant that persists throughout life as the median umbilical ligament; failure of complete lumen obliteration may result in distinct congenital urachal remnant anomalies[MP]. A fetal canal connecting the bladder with the allantois, persisting throughout life as a cord (median umbilical ligament). [TFD][VHOG] urachal @@ -145388,11 +145353,11 @@ urachus http://upload.wikimedia.org/wikipedia/commons/6/63/Gray1156.png - + - + @@ -145405,13 +145370,13 @@ - + EHDAA2 - + EHDAA2 @@ -145669,7 +145634,7 @@ - + @@ -145688,7 +145653,7 @@ - + Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP]. A layer separating the inner face of the dermis from the subjacent muscle cells. It is covered on both sides by a basement membrane. It contains pigment cells. Le Guellec et al, 2004.[TAO] @@ -145723,24 +145688,24 @@ hypodermis http://upload.wikimedia.org/wikipedia/commons/6/6d/Skin.svg - + - + - + ZFA - + FMA-modified @@ -145826,8 +145791,8 @@ - - + + @@ -145869,24 +145834,24 @@ hair follicle https://upload.wikimedia.org/wikipedia/commons/4/4d/Hair_follicle-en.svg - + - + - + FMA - + DOI:10.1016/j.cub.2008.12.005 @@ -145925,7 +145890,7 @@ - + The main part of the hair which is composed of trichocytes and is divided into the cortex and medulla. TODO - add distinct subclasses for coat hair vs vibrissa hair TODO - check definition of trichocyte in CL @@ -145944,14 +145909,14 @@ hair shaft - + - + DOI:10.1016/j.cub.2008.12.005 @@ -146433,8 +146398,8 @@ - - + + A cardiac ventricle that is in the right side of the heart. The muscular chamber on the right and in front of the left ventricle. It generally receives venous blood from the right atrium and conveys it into the pulmonary artery. [(1988)_Dorian_AF, Amsterdam, Dorian_AF, Elsevier's_encyclopaedic_dictionary_of_medicine, Part_B._Anatomy, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier, Part_B:_Anatomy_(1988)_Amsterdam_etc.:_Elsevier's_Encyclopaedic_Dictionary_of_Medicine][VHOG] @@ -146466,24 +146431,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.3/assets/3d-vh-f-heart.glb https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.3/assets/3d-vh-m-heart.glb - + - + - + PMID:17276708 - + cjm @@ -146663,7 +146628,7 @@ - + Cardiac chamber through which blood leaves the heart. A chamber of the heart that receives blood from one or more atria and pumps it by muscular contraction into the arteries.[AAO] One of four heart chambers.[TAO] @@ -146701,14 +146666,14 @@ cardiac ventricle - + - + Bgee:AN @@ -146765,8 +146730,8 @@ - - + + The vascular channel in the fetus passing through the liver and joining the umbilical vein with the inferior vena cava. add class for fetal shunt? The vascular channel in the fetus passing through the liver and joining the umbilical vein with the inferior vena cava. [TFD][VHOG] @@ -146787,11 +146752,11 @@ ductus venosus http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png - + - + @@ -146804,13 +146769,13 @@ - + EHDAA2 - + cjm @@ -147045,8 +147010,8 @@ - - + + A valve at the opening of the sinus venosus into the primordial atrium[TFD,modified]. in humans and mouse this is the opening from SV into right atrium. This class represents the valve connecting the SV to any atrium and is applicable to animals with a single atrium FMA:71120 @@ -147059,24 +147024,24 @@ sinoatrial valve - + - + - + ZFA-modified - + ZFA-modified @@ -147105,7 +147070,7 @@ - + @@ -147118,7 +147083,7 @@ - + The part of the heart connecting the atrium to the cardiac ventricle[ZFA]. In the developing heart, the constriction between the atrium and ventricle constitutes the atrial canal, and indicates the site of the future atrioventricular valves[WP]. The canal connecting the primitive atrium and ventricle in fishes and amniotes embryo. [TFD][VHOG] The heart is the first organ to form and function in a vertebrate. (...) Septation of the AV canal is initiated with the formation of inferior and superior endocardial cushions in response to signaling from the overlying myocardium. (...) Analysis of zebrafish mutants with cardiovascular defects uncovered a previously unexpected level of conservation between zebrafish and human cardiovascular physiology.[uncertain][VHOG] @@ -147149,24 +147114,24 @@ atrioventricular canal http://upload.wikimedia.org/wikipedia/commons/d/d8/Gray464.png - + - + - + EHDAA2 - + Bgee:AN @@ -147242,8 +147207,8 @@ - - + + The lateral thoracic vein is a tributary of the axillary vein. It runs with the lateral thoracic artery and drains the serratus ventralis muscle and the Pectoralis major muscle. Normally, the thoracoepigastric vein exists between this vein and superficial epigastric vein (a tributary of femoral vein), to act as a shunt for blood if the portal system (through the liver) develops hypertension or a blockage. [WP,unvetted]. EMAPA:37163 @@ -147258,24 +147223,24 @@ lateral thoracic vein http://upload.wikimedia.org/wikipedia/commons/e/e9/Gray576.png - + - + - + FMA/obol - + FMA/obol @@ -147315,7 +147280,7 @@ - + @@ -147331,14 +147296,14 @@ thoracodorsal vein - + - + FMA/obol @@ -148014,7 +147979,7 @@ - + @@ -148057,14 +148022,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/skin-female/v1.5/assets/3d-vh-f-skin.glb https://cdn.humanatlas.io/digital-objects/ref-organ/skin-male/v1.4/assets/3d-vh-m-skin.glb - + - + Wikipathways:WP2062 @@ -148931,7 +148896,7 @@ - + @@ -148982,14 +148947,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/spleen-male/v1.3/assets/3d-vh-m-spleen.glb https://upload.wikimedia.org/wikipedia/commons/d/d6/Illu_spleen.jpg - + - + multiple sources - true spleen appear in jawed vertebrates @@ -149047,16 +149012,16 @@ - + - - - + + + @@ -149136,19 +149101,19 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb https://upload.wikimedia.org/wikipedia/commons/6/64/Leber_Schaf.jpg - + - + - + - + @@ -149163,25 +149128,25 @@ - + ZFA - + ZFA-weakened - + EHDAA2 - + http://www.stembook.org/node/512 @@ -149451,7 +149416,7 @@ - + @@ -149503,7 +149468,7 @@ https://upload.wikimedia.org/wikipedia/commons/b/b1/GallbladderAnatomy-en.svg https://upload.wikimedia.org/wikipedia/commons/f/f4/Abdomal_organs.svg - + @@ -149516,7 +149481,7 @@ - + definitional @@ -149881,14 +149846,14 @@ - + - + @@ -149931,24 +149896,24 @@ kidney - + - + - + FMA - + definitional @@ -150121,7 +150086,7 @@ - + @@ -150164,7 +150129,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-female/v1.2/assets/3d-vh-f-small-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-male/v1.2/assets/3d-vh-m-small-intestine.glb - + @@ -150178,7 +150143,7 @@ - + Wikipedia @@ -150470,8 +150435,8 @@ - - + + @@ -150514,11 +150479,11 @@ Once the more complex mesonephros forms the pronephros undergoes apoptosis in amphibians. In fishes the nephron degenerates but the organ remains and becomes a component of the immune system[Wikipedia:Pronephros]. // TODO - check developmental relationships. Note that we previously include the ZFA/XAO terms under the more specific 'pronephric kidney', but these are now merged. TODO GCI: relationship: capable_of GO:0030104 pronephros - + - + @@ -150531,13 +150496,13 @@ - + OG - + ZFA @@ -150937,7 +150902,7 @@ - + @@ -150962,14 +150927,14 @@ solitary tract nuclear complex - + - + MA-abduced @@ -151273,7 +151238,7 @@ - + @@ -151311,14 +151276,14 @@ superior olivary complex http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png - + - + NIFSTD @@ -151420,7 +151385,7 @@ - + @@ -151466,14 +151431,14 @@ cerebellar cortex https://upload.wikimedia.org/wikipedia/commons/a/a7/Cerebellum_NIH.png - + - + Wikipedia @@ -151658,7 +151623,7 @@ - + @@ -151695,14 +151660,14 @@ anterior lobe of cerebellum http://upload.wikimedia.org/wikipedia/commons/1/13/CerebellumRegions.jpg - + - + Wikipedia @@ -151865,7 +151830,7 @@ - + @@ -151884,7 +151849,7 @@ - + A cardial valve in the atrioventricular region that separates the atrium from the ventricle and prevent backflow from the ventricles into the atria during systole. The atrioventricular valve has four distinct leaflets oriented anterior, posterior, left, and right of the atrioventricular orifice. Hu et al. 2001.[TAO] Valve in the heart through which blood flows from the atria to the ventricles. [TFD][VHOG] @@ -151908,24 +151873,24 @@ atrioventricular valve - + - + - + EHDAA2 - + FMA @@ -152127,9 +152092,9 @@ - - - + + + An atrioventricular valve that is part of the outflow part of the left atrium. @@ -152163,34 +152128,34 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.3/assets/3d-vh-f-heart.glb https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.3/assets/3d-vh-m-heart.glb - + - + - + - + FMA - + FMA - + FMA @@ -152253,7 +152218,7 @@ - + Layer of the dentate gyrus lying deep to the granule cell layer, within the opening of the C or V formed by the granule cell layer characterized by loosely packed polymorphic cells. BAMS:Hil BAMS:hdg @@ -152275,14 +152240,14 @@ Merge with CA4? hilus of dentate gyrus - + - + NIFSTD @@ -152571,7 +152536,7 @@ - + @@ -152624,7 +152589,7 @@ subcommissural organ http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png - + @@ -152637,7 +152602,7 @@ - + MA @@ -152812,7 +152777,7 @@ - + Nucleus that is part of the oculomotor nerve complex consisting of preganglionic parasympathetic neurons situated close to the midline at the level of the superior colliculus (Heimer, the Human Brain and Spinal Cord, 1994, pg 244). @@ -152863,14 +152828,14 @@ parvocellular oculomotor nucleus https://github.com/obophenotype/uberon/issues/2658 - + - + FMA MA ZFA @@ -153366,8 +153331,8 @@ - - + + A group of neuron cell bodies that form a thin, caplike configuration over the dorsolateral aspect of the crus cerebri; many of its cells are acetylcholinesterase positive. @@ -153393,24 +153358,24 @@ UBERON:0002144 peripeduncular nucleus - + - + - + NIFSTD - + MA @@ -153492,7 +153457,7 @@ - + IP BAMS:IPN @@ -153522,14 +153487,14 @@ interpeduncular nucleus - + - + NIF @@ -153833,7 +153798,7 @@ - + @@ -153890,14 +153855,14 @@ locus ceruleus http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png - + - + check ZFA NIFSTD @@ -154026,7 +153991,7 @@ - + Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703). @@ -154061,14 +154026,14 @@ superior salivatory nucleus http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray788.png - + - + definitional @@ -154527,7 +154492,7 @@ - + Regional part of medullary white matter (according to Neuronames) primarily found at the level of the pons, consisting of a very large bundle of fibers originating in the pontine nuclei projecting to the cerebellum (MM). BAMS:BP @@ -154561,14 +154526,14 @@ middle cerebellar peduncle http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray705.png - + - + FMA @@ -154799,12 +154764,20 @@ - + + + + - + + + + + + A nucleus of the lateral medullary nuclear complex. @@ -154836,22 +154809,12 @@ lateral reticular nucleus - - - - FMA - - - - - FMA - @@ -155057,7 +155020,7 @@ - + The nucleus raphe magnus, located directly rostral to the raphe obscurus, is afferently stimulated from axons in the spinal cord and cerebellum. This makes the magnus a likely candidate for part of the motor system; however, it seems to participate in the endogenous analgesia system. The magnus receives descending afferents from the periaqueductal gray, the paraventricular hypothalamic nucleus, central nucleus of the amygdala, lateral hypothalamic area, parvocellular reticular nucleus and the prelimbic, infralimbic, medial and lateral precentral cortices . All of these brain areas influence the main function of the raphe magnus. The main function of the magnus is mostly pain mediation; in fact it sends projections to the dorsal horn of the spinal cord to directly inhibit pain. The periaquiductal gray, the epicenter of analgesia, sends efferent connections to the nucleus raphe magnus in when it is stimulated by opiates (endogenous or otherwise). Electrical stimulation of the PAG produces analgesia, as well as administration of morphine to the PAG or n.r. magnus. The antinociceptic effects of electrical stimulation of the PAG can be blocked by administering naloxone, an opiate antagonist, to the n.r. magnus. All of this seems to indicate that the magnus is part of the endogenous opiate system, and acts to inhibit pain in the spinal cord. [WP,unvetted]. @@ -155089,14 +155052,14 @@ nucleus raphe magnus http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png - + - + FMA NIF Wikipedia @@ -155184,7 +155147,7 @@ - + The nucleus raphe pallidus receives afferent connections from the periaqueductal gray, the paraventricular hypothalamic nucleus, central nucleus of the amygdala, lateral hypothalamic area, and parvocellular reticular nucleus. Also, the pallidus receives afferents from the medial preoptic area, median preoptic nucleus and lateral paragigantocellular reticular nuclei . The pallidus has recently been shown to be involved in the activation of a fever as an immunoreaction. It has been implied that the preoptic area is constantly inhibiting the raphe pallidus, especially the rostral portion, with GABA. When the preoptic area receives immune signals from the body, the inhibition stops and the rostral portion of the raphe pallidus excites the intermediolateral cell column, which induces a fever . The raphe pallidus has also been known to mediate the tachycardia response, an extremely high heart rate known to be incited by emotional or psychological stress. Microinjections of a GABA-a antagonist into the raphe pallidus, induces an increased heart rate. Conversely, microinjections of muscimol, a GABA-a agonist, inhibit tachycardia in rats under air-stress stimuli. In both of these cases, GABA is mediating two different sympathetic responses, so clearly the nucleus raphe pallidus is a far more a complex nucleus than previously thought. [WP,unvetted]. @@ -155212,14 +155175,14 @@ nucleus raphe pallidus http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png - + - + FMA @@ -155501,7 +155464,7 @@ - + Nucleus in the caudal medulla that receive projections primarily from ipsilateral dorsal root ganglion cells via the posterior column of the spinal cord. in species with reduced hindlimbs (e.g. cetaceans) the size of this nucleus is reduced @@ -155533,7 +155496,7 @@ gracile nucleus http://upload.wikimedia.org/wikipedia/commons/d/df/Gray688.png - + @@ -155548,7 +155511,7 @@ - + Wikipedia @@ -155631,7 +155594,7 @@ - + @@ -155675,7 +155638,7 @@ area postrema http://upload.wikimedia.org/wikipedia/commons/7/77/Gray709.png - + @@ -155688,7 +155651,7 @@ - + MA ZFA @@ -155975,7 +155938,7 @@ - + The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. Layer that lines the lumen of the heart.[TAO] Part of the heart comprised of thin serous membrane, composed of endothelial tissue, that lines the interior of the heart.[AAO] @@ -156016,14 +155979,14 @@ endocardium http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png - + - + Bgee:AN @@ -156340,15 +156303,23 @@ - + + + + - - + + + + + + + @@ -156379,26 +156350,16 @@ alveolar sac - - - - - + - + MA - - - - - FMA - @@ -156481,12 +156442,6 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - - - - - FMA - @@ -156601,12 +156556,6 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - - - - - FMA - @@ -157196,7 +157145,7 @@ - + The white substance of the spinal cord lying on either side between the ventral median fissure and the ventral roots of the spinal nerves. FMA:74003 @@ -157220,14 +157169,14 @@ ventral funiculus of spinal cord http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg - + - + FMA-abduced-lr @@ -157394,7 +157343,7 @@ - + @@ -157436,14 +157385,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-female/v1.1/assets/3d-vh-f-main-bronchus.glb https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-male/v1.1/assets/3d-vh-m-main-bronchus.glb - + - + EHDAA2 @@ -157489,7 +157438,7 @@ - + @@ -157545,14 +157494,14 @@ lobar bronchus http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung05.jpg - + - + FMA @@ -157603,7 +157552,7 @@ - + @@ -157665,14 +157614,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - + - + FMA @@ -157804,8 +157753,8 @@ - - + + The conducting airway of the lungs found terminal to the bronchi; these structures contain neither cartilage nor mucous-secreting glands; the epithelium of the bronchioles becomes thinner with each branching. bronchiolar lacks submucosa and cartilage plates; they have 3 layers: mucosa, muscular layer and outer layer @@ -157834,24 +157783,24 @@ bronchiole https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png - + - + - + MA - + FMA @@ -157985,7 +157934,7 @@ - + @@ -158024,14 +157973,14 @@ respiratory bronchiole https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png - + - + ISBN:0123813611 @@ -158229,8 +158178,8 @@ - - + + Part of the hippocampal formation that is bounded by the entorhinal cortex and area CA1. It is characterized on the CA1 border by an abrupt widening of the pyramidal cell layer. A molecular layer is present that is continuous with that of CA1, although the stratum radiatum is no longer present. The stratum oriens is also not present. adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 468). @@ -158268,24 +158217,24 @@ subiculum https://upload.wikimedia.org/wikipedia/commons/9/99/Hippocampus.gif - + - + - + NIFSTD - + Wikipedia @@ -158664,15 +158613,15 @@ - - + + - + @@ -158734,34 +158683,34 @@ adenohypophysis http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray1181.png - + - + - + - + ZFA - + ZFA - + NCBIBook:NBK53175 ZFA @@ -158919,7 +158868,7 @@ - + Elevation on the ventral surface of the brain located at the zone of attachment between the hypothalamic floor and the hypophysis (Butler and Hodos, Comparative Vertebrate Neuroanatomy, 2nd ed., 2005, pg. 446). Region of the neurohypophysis.[AAO] It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG] @@ -158961,14 +158910,14 @@ median eminence of neurohypophysis http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + - + ISBN:0471888893 @@ -159068,15 +159017,15 @@ - + - - + + The posterior part of the pituitary gland that secretes hormones involved in blood pressure regulation such as oxytocin and antidiuretic hormon. request magnocellular cell from CL. Request oxytocin secretion from GO. Notes: 'The hypophysis or pituitary gland is derived, in part from an ectodermal outpocketing of the stomodeum (Rathke's Pouch) and in part from the floor of the diencephalon' @@ -159135,15 +159084,15 @@ neurohypophysis http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG - + - + - + @@ -159156,19 +159105,19 @@ - + ZFA - + Wikipedia - + Wikipedia @@ -159341,7 +159290,7 @@ - + @@ -159394,7 +159343,7 @@ integument - + @@ -159407,7 +159356,7 @@ - + FMA @@ -159745,7 +159694,7 @@ - + Vasculature that is part of the eye region. not part of the eye in ZFA. Note this changed to a blood vessel in ZFA @@ -159767,14 +159716,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + ISBN:0781772214 @@ -159919,7 +159868,7 @@ - + @@ -159952,7 +159901,7 @@ manubrium of sternum http://upload.wikimedia.org/wikipedia/commons/2/23/Gray116.png - + @@ -159965,7 +159914,7 @@ - + ISBN:0073040584 @@ -160006,8 +159955,8 @@ - - + + @@ -160058,24 +160007,24 @@ mammillary body http://upload.wikimedia.org/wikipedia/commons/9/97/Gray1180.png - + - + - + ABA - + GO definition @@ -160201,7 +160150,7 @@ - + A cartilaginous extension to the distal part of the sternum. this class may represent a mixed bony-cartilage element, or it may be the superclass of either purely cartilage or purely ossified elements usually ossified in the adult human. By age 15 to 29, the xiphoid usually fuses to the body of the sternum with a fibrous joint. Unlike the synovial articulation of major joints, this is non-movable. Much the way the first seven ribs articulate with the sternum, the cartilage in the celiac plexus joins on the xiphoid process, reinforcing it, and indirectly attaches the costal cartilage to the sternum. @@ -160229,14 +160178,14 @@ xiphoid process http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray117.png - + - + ISBN:0073040584 @@ -160327,7 +160276,7 @@ - + @@ -160348,14 +160297,14 @@ sternebra http://upload.wikimedia.org/wikipedia/commons/1/12/Illu_thoracic_cage.jpg - + - + MA @@ -160378,7 +160327,7 @@ - + Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis.[FMA]. A joint where fibrous tissue such as ligament connects two calcified tissues.[TAO] AEO:0000178 @@ -160397,7 +160346,7 @@ fibrous joint - + @@ -160410,7 +160359,7 @@ - + AEO @@ -160489,7 +160438,7 @@ A continuation of the neuron projection bundle component of a nerve inside, crossing or immediately outside the central nervous system. We consider cranial nerve roots to be primarily CNS structures, but model spinal nerve roots as PNS structures, due to the existence of ganglia on the roots. - The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, FBC:DOS]. + The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, https://orcid.org/0000-0002-7073-9172]. FMA has 'central zone of nerve' which is the superclass of cranial nerve tracts, which the FMA sometimes calls roots FMA:5981 FMA:82524 @@ -160515,8 +160464,8 @@ - The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, FBC:DOS]. - FBbt:00007602, FBC:DOS + The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, https://orcid.org/0000-0002-7073-9172]. + FBbt:00007602, https://orcid.org/0000-0002-7073-9172 @@ -160717,12 +160666,6 @@ cartilaginous joint - - - - - FMA - @@ -161090,7 +161033,7 @@ - + @@ -161117,7 +161060,7 @@ Gene notes: Gsc and Prx1 are essential for tympanic ring development tympanic ring - + @@ -161130,7 +161073,7 @@ - + MA @@ -161188,7 +161131,7 @@ - + Group of neurons situated on the ventral surface of the fornix at the level of the foramen of Monro in the third ventricle (adapted from Wikipedia via NIF). @@ -161215,7 +161158,7 @@ subfornical organ http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray715.png - + @@ -161228,7 +161171,7 @@ - + MA-modified @@ -161305,7 +161248,7 @@ - + @@ -161334,14 +161277,14 @@ https://github.com/obophenotype/uberon/issues/1795 http://upload.wikimedia.org/wikipedia/commons/b/b3/Gray197.png - + - + MA ZFA @@ -161458,7 +161401,7 @@ - + From the posterior wall of the saccule a canal, the ductus endolymphaticus, is given off; this duct is joined by the ductus utriculosaccularis, and then passes along the aquaeductus vestibuli and ends in a blind pouch, the endolymphatic sac, on the posterior surface of the petrous portion of the temporal bone, where it is in contact with the dura mater. Studies suggest that the endolymphatic duct and endolymphatic sac perform both absorptive and secretory, as well as phagocytic and immunodefensive,functions . [WP,unvetted]. EHDAA2 structure is embryonic The blind extremity of the endolymphatic duct. [TFD][VHOG] @@ -161481,7 +161424,7 @@ endolymphatic sac - + @@ -161494,7 +161437,7 @@ - + EHDAA2 @@ -161634,7 +161577,7 @@ - + The costal margin, sometimes referred to as the costal arch, is the medial margin formed by the false ribs, which in humans is from the eighth rib to the tenth rib. we treat margin and arch in FMA as equivalent here, as a temporary measure. This may be split in future. We follow MA in making this a part of the rib. EMAPA:37491 @@ -161653,7 +161596,7 @@ costal arch http://upload.wikimedia.org/wikipedia/commons/3/3d/Gray115.png - + @@ -161666,7 +161609,7 @@ - + MA @@ -161802,15 +161745,15 @@ - + - - + + @@ -161855,34 +161798,34 @@ http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png http://upload.wikimedia.org/wikipedia/commons/c/cb/Cochlea-crosssection.svg - + - + - + - + MA - + Wikipedia:Scala_media - + https://github.com/obophenotype/uberon/issues/387 @@ -161968,7 +161911,7 @@ - + An intersegmental rod-shaped bone that forms in the peritoneal membrane and attach to the vertebral parapophyses. Endochondral bone that is intersegmental and rod-shaped, forming in the peritoneal membrane and attached to the vertebral parapophyses. Ribs protect and support internal organs.[TAO] @@ -162003,14 +161946,14 @@ rib - + - + definitional @@ -162066,15 +162009,15 @@ - - + + - + @@ -162103,35 +162046,35 @@ interparietal bone - + - + - + - + vault series ISBN:0073040584 - + PMID:11523816 - + definitional @@ -162212,7 +162155,7 @@ - + @@ -162234,7 +162177,7 @@ head of rib http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray122.png - + @@ -162247,7 +162190,7 @@ - + PMID:15906248 @@ -162283,7 +162226,7 @@ - + EMAPA:36014 FMA:7577 MA:0001416 @@ -162297,14 +162240,14 @@ UBERON:0002231 body of rib - + - + PMID:15906248 @@ -162387,6 +162330,7 @@ + @@ -162394,7 +162338,7 @@ - + The overlaying membrane of the cochlear duct, an extracellular matrix of the inner ear that contacts the stereocilia bundles of specialized sensory hair cells; sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia, and leads to fluctuations in hair cell membrane potential, transducing sound into electrical signals[MP,modified]. The tectorial membrane (TM) is one of two acellular gels in the cochlea of the inner ear, the other being the basilar membrane (BM). The TM is located above the sulcus spiralis internus and the spiral organ of Corti and extends along the longitudinal length of the cochlea parallel to the BM. Radially the TM is divided into three zones, the limbal, middle and marginal zones. Of these the limbal zone is the thinnest (transversally) and overlies the auditory teeth of Huschke with its inside edge attached to the spiral limbus. The marginal zone is the thickest (transversally) and is divided from the middle zone by Hensen's Stripe. It overlies the sensory inner hair cells and electrically-motile outer hair cells of the organ of Corti and during acoustic stimulation stimulates the inner hair cells through fluid coupling, and the outer hair cells via direct connection to their tallest stereocilia[Wikipedia:Tectorial_membrane_(cochlea)]. in some squamate lineages, the tectorial membrane may not cover the whole cochlear duct/papilla. In some lineages, the tectorial membrane is divided into units called sallets[ISBN:9780387714691] @@ -162416,7 +162360,7 @@ tectorial membrane of cochlea - + @@ -162429,7 +162373,7 @@ - + limbal zone @@ -162556,13 +162500,21 @@ - + + + + - + + + + + + The tubercle of a rib is an eminence on the posterior surface, at the junction of the neck and body of the rib, and nearer the lower than the upper border. It consists of an articular and a non-articular portion. The articular portion, the lower and more medial of the two, presents a small, oval surface for articulation with the end of the transverse process of the lower of the two vertebrae to which the head is connected. The non-articular portion is a rough elevation, and affords attachment to the ligament of the tubercle. The tubercle is much more prominent in the upper than in the lower ribs[WP]. EMAPA:37736 @@ -162579,16 +162531,6 @@ tubercle of rib - - - - - - - - - FMA - @@ -162872,15 +162814,15 @@ - + - - + + Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). TODO - add superclass to unify with VNC? @@ -162938,34 +162880,34 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/spinal-cord-female/v1.1/assets/3d-vh-f-spinal-cord.glb https://cdn.humanatlas.io/digital-objects/ref-organ/spinal-cord-male/v1.1/assets/3d-vh-m-spinal-cord.glb - + - + - + - + ZFA - + definitional - + definitional @@ -163175,7 +163117,7 @@ - + @@ -163205,14 +163147,14 @@ nucleus pulposus http://upload.wikimedia.org/wikipedia/commons/d/d9/Cervical_vertebra_english.png - + - + mah ISBN:0073040584 Wikipedia @@ -163318,8 +163260,8 @@ - - + + One of the bones of the upper jaw situated between and in front of the maxillae[VHOG]. requires checking embryonic vs adult; isa fetal organ part in FMA; adult bone of upper jaw in AAO and ZFA; split. Note that we have loops if we add develops_from UBERON:0005620 primary palate @@ -163356,24 +163298,24 @@ premaxilla http://upload.wikimedia.org/wikipedia/commons/4/4a/Gray160.png - + - + - + ISBN:0073040584 - + Bgee:AN @@ -163756,7 +163698,7 @@ - + The passage between the venous and arterial mesocardia -i.e., between the aorta and pulmonary artery in front and the superior vena cava behind. Also, the sinus that forms in the pericardial cavity where the dorso-mesentary pericardium reside.[WP,unvetted]. transverse sinus EHDAA2:0002077 @@ -163772,14 +163714,14 @@ transverse pericardial sinus http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png - + - + MA @@ -163907,11 +163849,11 @@ - - - - - + + + + + The iliocostalis is the muscle immediately lateral to the longissimus that is the nearest to the furrow that separates the epaxial muscles from the hypaxial. It lies very deep to the fleshy portion of the serratus ventralis (serratus anterior). [WP,unvetted]. EMAPA:37603 FMA:77177 @@ -163929,23 +163871,23 @@ iliocostalis muscle http://upload.wikimedia.org/wikipedia/commons/8/89/Iliostalis.png - + - + - + - + - + @@ -163958,33 +163900,33 @@ - + Wikipedia - + dbpedia - + Sacrum/Illiac Crest/Spinous Processes of lower lumbar/thoracic vertebrae dbpedia - + Sacrum/Illiac Crest/Spinous Processes of lower lumbar/thoracic vertebrae dbpedia - + Ribs dbpedia @@ -164095,7 +164037,7 @@ - + An embryological anatomical structure that forms an open connection between the initial area of development of the thyroid gland and its final position; it is located exactly midline, between the anterior 2/3rds and posterior 1/3rd of the tongue; this duct normally atrophies and closes off as the foramen cecum before birth. An embryonic duct extending between the thyroid primordium and the posterior tongue. [TFD][VHOG] A duct, called the thyroglossal duct in mammals, is considered to be characteristic of thyroid development. The thyroglossal duct, degenerating in many species during late development, marks the way the thyroid primordium relocates during embryonic development from the pharynx to its position deep in the cervical mesenchyme. We cannot exclude that the duct of the endostyle and the thyroglossal duct may have evolved independently, but as they both represent a more or less persistent connection of the organ to the pharynx, it is likely that they are homologous structures.[well established][VHOG] @@ -164116,7 +164058,7 @@ thyroglossal duct https://upload.wikimedia.org/wikipedia/commons/f/fd/Illu08_thyroid.jpg - + @@ -164129,7 +164071,7 @@ - + MA VHOG @@ -164204,9 +164146,9 @@ - - - + + + An organ thought to supplement the olfactory system in receiving pheromonic communication. The sensory part of the organ is in two long, thin sacs, situated on either side of the nasal septum at its base. An organ thought to supplement the olfactory system in receiving pheromonic communication. The sensory part of the organ is in two long, thin sacs, situated on either side of the nasal septum at its base. [TFD][VHOG] (...) the vomeronasal organ is known only in some tetrapods. It is absent in most turtles, crocodiles, birds, some bats, and aquatic mammals. In amphibians, it is in a recessed area off the main nasal cavity. (...) In mammals possesing this organ, it is an isolated area of olfactory membrane within the nasal cavity that is usually connected to the mouth via the nasopalatine duct (reference 1); The opinions concerning the presence and functioning of the vomeronasal organ in humans are controversial. The vomeronasal cavities appear early in human foetuses. (...) Historical examination of the nasal septum revealed the presence of vomeronasal cavities in approximately 70% of adults. In contrast to the situation in other mammals, the organ is not supported by a rigid tube of bone or cartilage (reference 2); (...) the best evidence for the homology of the human VNO to that of other primates (and of mammals in general) is ontogenetic in nature, based on a common embryonic origin from a thickening (vomeronasal primordium) on the medial aspect of each olfactory pit (reference 3); (...) suggesting that lungfish possess a region homologous to the accessory olfactory bulb of tetrapods. Based on these results, it seems appropriate to refer to the recess epithelium as a primordium of the vomeronasal organ (reference 4). [debated][VHOG] @@ -164239,34 +164181,34 @@ vomeronasal organ http://upload.wikimedia.org/wikipedia/commons/8/84/Gray51.png - + - + - + - + Wikipedia - + Wikipedia - + EHDAA2-abduced @@ -164334,8 +164276,8 @@ - - + + @@ -164387,24 +164329,24 @@ dorsal horn of spinal cord http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg - + - + - + FMA-abduced-lr - + GO @@ -164541,7 +164483,7 @@ - + @@ -164591,14 +164533,14 @@ ventral horn of spinal cord - + - + FMA-abduced-lr @@ -164730,7 +164672,7 @@ - + The white substance of the spinal cord lying on either side between the posterior median sulcus and the dorsal root. ZFA class is undefined. We currently do not place this as part of the DCML pathway as this would lead to taxon constraint violations. FMA:77461 @@ -164753,14 +164695,14 @@ dorsal funiculus of spinal cord http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg - + - + FMA-abduced-lr @@ -165053,7 +164995,7 @@ - + @@ -165095,7 +165037,7 @@ dorsal root of spinal cord https://upload.wikimedia.org/wikipedia/commons/d/d2/Spinal_nerve.svg - + @@ -165108,7 +165050,7 @@ - + Wikipedia @@ -165279,7 +165221,7 @@ - + @@ -165315,14 +165257,14 @@ lentiform nucleus http://upload.wikimedia.org/wikipedia/commons/f/fc/Gray741.png - + - + MA @@ -165382,8 +165324,8 @@ - - + + @@ -165451,24 +165393,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + - + ZFA - + ISBN:0471888893 @@ -165884,7 +165826,7 @@ - + The laterodorsal tegmental nucleus (or lateroposterior tegmental nucleus) is a nucleus situated in the brainstem, spanning the midbrain tegmentum and the pontine tegmentum. [WP,unvetted]. @@ -165909,14 +165851,14 @@ laterodorsal tegmental nucleus - + - + MA @@ -166082,7 +166024,7 @@ - + The pupillary membrane in mammals exists in the fetus as a source of blood supply for the lens. It normally atrophies from the time of birth to the age of four to eight weeks. FMA:77663 MA:0001293 @@ -166090,14 +166032,14 @@ UBERON:0002269 pupillary membrane - + - + MA-modified @@ -166115,17 +166057,17 @@ - - - - + + + + - + @@ -166164,23 +166106,23 @@ hyaloid artery http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + - + - + - + @@ -166193,31 +166135,31 @@ - + Wikipedia - + ZFA - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -166516,7 +166458,7 @@ - + The osseous spiral lamina consists of two plates of bone, and between these are the canals for the transmission of the filaments of the acoustic nerve. On the upper plate of that part of the lamina which is outside the vestibular membrane, the periosteum is thickened to form the limbus spiralis (or limbus laminæ spiralis), this ends externally in a concavity, the sulcus spiralis internus, which represents, on section, the form of the letter C. [WP,unvetted]. EMAPA:35496 @@ -166535,14 +166477,14 @@ lamina of spiral limbus http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray930.png - + - + MA @@ -166576,7 +166518,7 @@ - + A concavity in the floor of the cochlear duct, formed by either the overhanging vestibular lip (inner spiral sulcus) or the spiral prominence and the spiral organ (outer spiral sulcus). EMAPA:35800 FMA:77744 @@ -166585,14 +166527,14 @@ UBERON:0002277 spiral sulcus - + - + MA @@ -166608,7 +166550,7 @@ - + @@ -166634,14 +166576,14 @@ perilymphatic space - + - + ZFA @@ -166725,7 +166667,7 @@ - + @@ -166771,14 +166713,14 @@ otolith http://upload.wikimedia.org/wikipedia/commons/c/cb/Bigotolith.jpg - + - + MP Wikipedia @@ -166951,7 +166893,7 @@ - + The upper portion of the spiral ligament contains numerous capillary loops and small blood vessels, and is termed the stria vascularis. It produces endolymph for the scala media, one of the three fluid-filled compartments of the cochlea. [WP,unvetted]. represented as a wall in FMA. MESH def implies part of spiral ligament but better represented as adjacency / overlaps BIRNLEX:2525 @@ -166979,14 +166921,14 @@ stria vascularis of cochlear duct http://upload.wikimedia.org/wikipedia/commons/c/c7/Cochlea-crosssection.png - + - + FMA MA @@ -167181,7 +167123,7 @@ - + A brain ventricle that is part of a telencephalon. In mammals and species with an evaginated telencephalon, this is one of a pair of lateral structures, one in each hemisphere. The lateral ventricles are part of the ventricular system of the brain. Classified as part of the telencephalon, they are the largest of the ventricles. The lateral ventricles connect to the central third ventricle through the interventricular foramina of Monro[WP]. @@ -167233,14 +167175,14 @@ telencephalic ventricle http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png - + - + material to immaterial EHDAA2 @@ -167337,7 +167279,7 @@ - + @@ -167386,14 +167328,14 @@ third ventricle http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png - + - + EHDAA2 @@ -167638,7 +167580,7 @@ - + Part of ventricular system of brain consisting of a narrow channel in the midbrain connecting the third and fourth ventricles. (Maryann Martone). The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG] @@ -167699,14 +167641,14 @@ midbrain cerebral aqueduct http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png - + - + EHDAA2 @@ -167925,8 +167867,8 @@ - - + + @@ -167987,11 +167929,11 @@ central canal of spinal cord http://upload.wikimedia.org/wikipedia/commons/d/dc/Medulla_spinalis_-_Section_-_English.svg - + - + @@ -168004,13 +167946,13 @@ - + MA - + FMA @@ -168371,7 +168313,7 @@ - + @@ -168393,7 +168335,7 @@ scala media http://upload.wikimedia.org/wikipedia/commons/b/bc/Gray928.png - + @@ -168406,7 +168348,7 @@ - + FMA @@ -168430,7 +168372,7 @@ - + @@ -168459,14 +168401,14 @@ dorsal mesentery http://upload.wikimedia.org/wikipedia/commons/8/85/Gray985.png - + - + EHDAA2 @@ -168758,7 +168700,7 @@ - + @@ -168771,7 +168713,7 @@ - + @@ -168807,24 +168749,24 @@ alveolus of lung https://upload.wikimedia.org/wikipedia/commons/4/46/Alveolus_diagram.svg - + - + - + MA - + PMID:12625309 PMID:12869615 @@ -169034,7 +168976,7 @@ - + @@ -169053,7 +168995,7 @@ - + An anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate[GO]. a microscopic structure in the kidney, which regulates the function of each nephron. The juxtaglomerular apparatus is named for its proximity to the glomerulus: it is found between the vascular pole of the renal corpuscle and the returning distal convoluted tubule of the same nephron. This location is critical to its function in regulating renal blood flow and glomerular filtration rate. The three cellular components of the apparatus are the macula densa, extraglomerular mesangial cells, and juxtaglomerular cells (also known as granular cells)[WP]. BTO:0005157 @@ -169074,24 +169016,24 @@ juxtaglomerular apparatus - + - + - + MA - + GO @@ -169493,8 +169435,8 @@ - - + + @@ -169535,25 +169477,25 @@ hippocampus fimbria http://upload.wikimedia.org/wikipedia/commons/6/6b/Gray749.png - + - + - + Need to determine whether the fimbria is part of the fornix. Sometimes the language suggests it isn't always thought of that way, but I see no useful reason why it should be separate; it all forms one continuous white matter tract. Neuronames and others include this as part of the hippocampal formation (MM) NIFSTD - + MA NIFSTD @@ -169788,7 +169730,7 @@ - + Dorsal part of the midbrain, consisting of the superior and inferior colliculi and the pretectal nuclei (MM). The tectum - a multisensory, topologically mapped structure in the roof of the midbrain presents a remarkable degree of conservation in all vertebrate radiations; although it varies in the extent of its development in different vertebrate classes, there is considerable evidence now to deem its layered structure, its cell types, and its hodological pattern as homologous in all vertebrates.[well established][VHOG] In adult humans it is present only in the mesencephalon as the inferior and the superior colliculi @@ -169826,14 +169768,14 @@ midbrain tectum http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray685.png - + - + Wikipedia @@ -170154,7 +170096,7 @@ - + Regional part of cerebellum consisting of the myelinated axons lying deep to the granule cell layer, excluding the deep cerebellar nuclei and the cerebellar peduncles. CNS white matter that is part of the cerebellum.[TAO] in NIF this is a composite structure; in MA and FMA it is explicitly part of cerebellum. This leads to consistency problems with strict parcellation schemes like ABA, see cerebellar peduncles. In NIF this is a composite structure, this is followed partially here in weakening the relationship to overlaps @@ -170183,14 +170125,14 @@ white matter of cerebellum - + - + FMA-weakened MA-weakened @@ -170455,7 +170397,7 @@ - + @@ -170477,14 +170419,14 @@ glomerular mesangium - + - + GO @@ -170501,8 +170443,8 @@ - - + + The tissue comprised of mesangial cells that fill the triangular space between the macula densa and the afferent and efferent arterioles of the juxtaglomerular apparatus. EMAPA:28278 FMA:84141 @@ -170512,24 +170454,24 @@ EDITOR_NOTE check MA part_ofs - should be spatially disjoint from renal glomerulus? extraglomerular mesangium - + - + - + MA - + MA @@ -170591,7 +170533,7 @@ - + @@ -170629,14 +170571,14 @@ EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct coelemic cavity lumen - + - + definitional @@ -170733,7 +170675,7 @@ - + Any muscle organ that is part of a back [Automatically generated definition]. EMAPA:35161 @@ -170746,14 +170688,14 @@ muscle of back - + - + prolog @@ -170995,8 +170937,8 @@ - - + + @@ -171052,11 +170994,11 @@ notochord http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + @@ -171075,13 +171017,13 @@ - + ZFA - + EHDAA2 @@ -171166,7 +171108,7 @@ - + Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. EDITOR_NOTE currently classified as an epithelial vesicle, consistent with EHDAA2 and https://github.com/obophenotype/uberon/wiki/The-neural-crest. Consider making 'somitic mesoderm' a separate term and correlate with regionalization processes. Consider moving ZFA term to 'trunk somite' as it is part of the trunk @@ -171211,7 +171153,7 @@ somite http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -171224,7 +171166,7 @@ - + ZFA @@ -171706,8 +171648,8 @@ - - + + The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus[GO]. not part of a nephron or distal tubule in MA and FMA @@ -171725,24 +171667,24 @@ macula densa - + - + - + MA - + GO @@ -171772,7 +171714,7 @@ - + @@ -171819,7 +171761,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + @@ -171839,7 +171781,7 @@ - + Wikipedia @@ -171957,7 +171899,7 @@ - + A lamina propria that is part of a bronchus [Automatically generated definition]. EMAPA:35194 FMA:86619 @@ -171985,14 +171927,14 @@ UBERON:0002338 lamina propria of bronchus - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -172498,11 +172440,11 @@ - - - - - + + + + + A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. EDITOR_NOTE consider including subclasses for pre- and post- migratory (e.g. sheets/paths/streams). @@ -172540,55 +172482,55 @@ http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray644.png https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + - + - + - + XAO https://github.com/obophenotype/uberon/wiki/The-neural-crest - + BTO - + PMID:11523831 - + pre migratory https://github.com/obophenotype/uberon/wiki/The-neural-crest - + PMID:11523831 @@ -172955,15 +172897,15 @@ - - + + - + A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart. External layer of the heart.[TAO] @@ -172992,34 +172934,34 @@ EDITOR_NOTE TODO - check links with UBERON:0002425 visceral serous pericardium. develops from proepicardium. WP:Epicardium -- When considered as a part of the pericardium, it is the inner layer, or visceral pericardium, continuous with the serous layer. epicardium - + - + - + - + multiple - + FMA-inferred - + FMA @@ -173204,11 +173146,11 @@ - - - - - + + + + + @@ -173244,23 +173186,23 @@ conducting system of heart - + - + - + - + - + @@ -173273,31 +173215,31 @@ - + FMA - + FMA - + FMA - + FMA - + FMA @@ -173364,7 +173306,7 @@ - + @@ -173421,7 +173363,7 @@ http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg - + @@ -173434,7 +173376,7 @@ - + ZFA @@ -173710,8 +173652,8 @@ - - + + @@ -173748,11 +173690,11 @@ http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png http://upload.wikimedia.org/wikipedia/commons/b/b6/ECG_Principle_fast.gif - + - + @@ -173765,13 +173707,13 @@ - + GO - + FMA @@ -173839,8 +173781,8 @@ - - + + @@ -173869,11 +173811,11 @@ cardiac Purkinje fiber http://upload.wikimedia.org/wikipedia/commons/9/96/Gray498.png - + - + @@ -173886,7 +173828,7 @@ - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -173894,7 +173836,7 @@ - + FMA @@ -174040,7 +173982,7 @@ - + Subdivision of trunk proper, which is demarcated from the pelvis by the inferior surface of the pelvic diaphragm and from the lower limbs by the perineofemoral lines; together with the thorax, abdomen, and pelvis, it constitutes the trunk[FMA]. perianal FMA has class anal part of perineum, which may be the same as what EHDAA2 calls perineum @@ -174066,7 +174008,7 @@ perineum http://upload.wikimedia.org/wikipedia/commons/e/ef/Gray406.png - + @@ -174079,7 +174021,7 @@ - + EHDAA2 @@ -174116,7 +174058,7 @@ - + @@ -174129,7 +174071,7 @@ - + Serous membrane which is divided into parietal and visceral serous pericardium. EMAPA:19030 FMA:9582 @@ -174142,24 +174084,24 @@ serous pericardium - + - + - + FMA - + FMA @@ -174200,7 +174142,7 @@ - + @@ -174237,14 +174179,14 @@ peritoneum http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray1040.png - + - + MP @@ -174297,14 +174239,14 @@ - + - + Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA]. most superficial part of pericardium; continuous with the outer adventitial layer of the neighboring great blood vessels. [Wikipedia:Pericardium] EMAPA:19029 @@ -174319,11 +174261,11 @@ fibrous pericardium - + - + @@ -174336,13 +174278,13 @@ - + FMA - + WP @@ -174372,7 +174314,7 @@ - + Membrane organ that surrounds the brain and the spinal cord. Membrane covering the brain and spinal cord. It is represented by a single layer in fishes, two in amphibians, reptiles and birds and three in mammals (named dura mater, arachnoid and pia mater). [TFD][VHOG] In fishes, the meninges consist of a single membrane, the primitive meninx, wrapped around the brain and spinal cord. With the adoption of terrestrial life, the meninges doubled. In amphibians, reptiles, and birds, the meninges include a thick outer dura mater derived from mesoderm and a thin inner secondary meninx. (...) In mammals, the dura mater persists, but division of the secondary meninx yields both the arachnoid and the pia mater from ectomesoderm.[well established][VHOG] @@ -174408,7 +174350,7 @@ meninx https://upload.wikimedia.org/wikipedia/commons/4/48/Illu_meninges.jpg - + @@ -174421,7 +174363,7 @@ - + Bgee:AN @@ -174478,7 +174420,7 @@ - + @@ -174523,14 +174465,14 @@ http://upload.wikimedia.org/wikipedia/commons/3/31/Gray770-en.svg http://upload.wikimedia.org/wikipedia/commons/6/65/Gray770.png - + - + check-aves ISBN:0073040584 @@ -174571,7 +174513,7 @@ - + @@ -174604,14 +174546,14 @@ arachnoid mater http://upload.wikimedia.org/wikipedia/commons/a/a0/Gray767.png - + - + ISBN:0073040584 @@ -174652,8 +174594,8 @@ - - + + Thick, fibrous meningeal covering surrounding the brain and spinal cord. It is the outermost of the three meningeal coverings. It consists of two layers: the periosteal dura linking the inner surface of the skull and the meningeal dura that lies above the arachnoid dural membrane. The meningeal layer draws away from the periosteal layer and certain locations to form the dural reflections. the outermost of the three layers of the meninges surrounding the brain and spinal cord. The other two meningeal layers are the pia mater and the arachnoid mater. The dura surrounds the brain and the spinal cord and is responsible for keeping in the cerebrospinal fluid[Wikipedia:Dura_mater]. @@ -174682,24 +174624,24 @@ dura mater http://upload.wikimedia.org/wikipedia/commons/8/8e/Meninges-en.svg - + - + - + PMID:16496288 - + definitional @@ -174745,7 +174687,7 @@ - + @@ -174764,8 +174706,8 @@ - - + + @@ -174803,15 +174745,15 @@ tympanic membrane - + - + - + @@ -174824,19 +174766,19 @@ - + MA - + Wikipedia - + cjm @@ -175274,7 +175216,7 @@ - + Either of a pair of complex endocrine organs near the anterior medial border of the kidney consisting of a mesodermal cortex that produces glucocorticoid, mineralocorticoid, and androgenic hormones and an ectodermal medulla that produces epinephrine and norepinephrine[BTO]. Anatomical structure which is found on the surface of the kidney and secretes various hormones including epinephrine, norephinephrine, aldosterone, corticosterone, and cortisol.[AAO] All craniates have groups of cells homologous to the mammalian adrenocortical and chromaffin tissues, but they are scattered in and near the kidneys in fishes. (...) The cortical and chromaffin tissues come together to form adrenal glands in tetrapods.[well established][VHOG] @@ -175318,14 +175260,14 @@ http://upload.wikimedia.org/wikipedia/commons/9/9d/Illu_endocrine_system_New.png http://upload.wikimedia.org/wikipedia/commons/c/c6/Illu_endocrine_system.jpg - + - + FMA-abduced-lr @@ -175464,7 +175406,7 @@ - + Anatomical structure of largely lymphoid tissue that functions in cell-mediated immunity by being the site where T cells develop. check - a subtype of gland? not in GO. NCIT has thymus and thymus gland. EHDAA2 has ductless gland. @@ -175508,7 +175450,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/thymus-male/v1.3/assets/3d-vh-m-thymus.glb https://upload.wikimedia.org/wikipedia/commons/c/cf/Illu_thymus.jpg - + @@ -175521,7 +175463,7 @@ - + ZFA @@ -175584,7 +175526,7 @@ - + @@ -175641,14 +175583,14 @@ bone marrow http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg - + - + FMA MA @@ -175704,7 +175646,7 @@ - + @@ -175745,14 +175687,14 @@ tonsil - + - + cjm @@ -175793,8 +175735,8 @@ - - + + Tonsils on the left and right sides at the back of the throat. one of the mucosa-associated lymphoid tissues (MALT), located at the entrance to the upper respiratory and gastrointestinal tracts to protect the body from the entry of exogenous material through mucosal sites[WP]. @@ -175823,18 +175765,18 @@ palatine tonsil https://upload.wikimedia.org/wikipedia/commons/f/f6/Illu_mouth.jpg - + - + - + the dorsal elongation of the second pouch endoderm of all mammals, with the exception of rodents, gives rise to the epithelial lining of palatine tonsils; in rodents, the ventral portion of the second pouch appears to degenerate whereas the remaining part is incorporated into the lateral border of the pharynx; it appears that rodents no longer require tonsils as their function is carried out by the NALT (Nose/Nasal-Associated Lymphoid Tissue) system in the upper respiratory tract ISBN:1607950324 MP:anna @@ -175843,7 +175785,7 @@ - + Wikipedia @@ -175968,8 +175910,8 @@ - - + + A cartilaginous ring that provides support for the arytenoid cartilages and forms the caudal part of the larynx. Cartilaginous ring that provides support for the arytenoid cartilages. Its ventral part is bent posteriorly to form a V.[AAO] The ringlike cartilage forming the caudal part of the larynx. [TFD][VHOG] @@ -176005,11 +175947,11 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-female/v1.1/assets/3d-vh-f-larynx.glb https://cdn.humanatlas.io/digital-objects/ref-organ/larynx-male/v1.1/assets/3d-vh-m-larynx.glb - + - + @@ -176022,13 +175964,13 @@ - + EHDAA2 - + Wikipedia @@ -176147,8 +176089,8 @@ - - + + @@ -176186,24 +176128,24 @@ defined generically so could in theory encompass FBbt:00003260 'skeletal muscle of head', or the muscle of a starfish Aristotle's lantern, but we restrict this to craniates. Skeletal muscles of the head originate from the non-segmented head mesoderm (Noden, 1983; Wachtler et al., 1984) cranial muscle - + - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + EHDAA2-abduced @@ -176278,7 +176220,7 @@ - + Any muscle that is part of the cervical (neck) region. FMA:9617 @@ -176298,14 +176240,14 @@ muscle of neck - + - + prolog @@ -176363,7 +176305,7 @@ - + @@ -176394,14 +176336,14 @@ muscle of abdomen - + - + prolog @@ -176452,7 +176394,7 @@ - + Any muscle organ that is part of a perineum [Automatically generated definition]. EMAPA:36629 @@ -176469,14 +176411,14 @@ perineal muscle - + - + prolog @@ -176529,12 +176471,12 @@ - - - - - - + + + + + + A large superficial muscle that extends longitudinally from the occipital bone to the lower thoracic vertebrae and laterally to the spine of the scapula (shoulder blade). Its functions are to move the scapulae and support the arm. The trapezius has three functional regions: the superior region (descending part), which supports the weight of the arm; the intermediate region (transverse part), which retracts the scapulae; and the inferior region (ascending part), which medially rotates and depresses the scapulae. [WP,unvetted]. The sternomastoid and the three parts of the trapezius are branchiomeric muscles that have secondarily acquired an attachment to the pectoral girdle. They evolved from the fish cucullaris.[well established][VHOG] @@ -176555,68 +176497,68 @@ trapezius muscle http://upload.wikimedia.org/wikipedia/commons/6/60/Trapezius.png - + - + - + - + - + - + - + external occipital protuberance nuchal ligament medial superior nuchal line spinous processes of vertebrae C7-T12 dbpedia - + external occipital protuberance nuchal ligament medial superior nuchal line spinous processes of vertebrae C7-T12 dbpedia - + posterior border of the lateral third of the clavicle acromion process and spine of scapula dbpedia - + posterior border of the lateral third of the clavicle acromion process and spine of scapula dbpedia - + dbpedia - + dbpedia @@ -176668,10 +176610,10 @@ - - - - + + + + The pectoralis major is a thick, fan-shaped muscle, situated at the upper front of the chest wall. It makes up the bulk of the chest muscles in the male and lies under the breast in the female. Underneath the pectoralis major is the pectoralis minor, a thin, triangular muscle. [WP,unvetted]. EHDAA2:0001424 @@ -176695,19 +176637,19 @@ pectoralis major https://upload.wikimedia.org/wikipedia/commons/6/6c/Pectoralis_major.png - + - + - + - + @@ -176720,28 +176662,28 @@ - + lateral pectoral nerve and medial pectoral nerveClavicular head: C5 and C6Sternocostal head: C7 C8 and T1 dbpedia - + anterior surface of the sternum and the superior six costal cartilages and the aponeurosis of the external oblique muscle dbpedia - + anterior surface of the medial half of the clavicle dbpedia - + Lateral lip of intertubercular groove of the humerus dbpedia @@ -176771,7 +176713,7 @@ - + @@ -176812,14 +176754,14 @@ rectus abdominis muscle https://upload.wikimedia.org/wikipedia/commons/9/95/Rectus_abdominis.png - + - + XAO @@ -176861,9 +176803,9 @@ - - - + + + The supraspinatus is a relatively small muscle of the upper limb that takes its name from its origin from the supraspinous fossa superior to the spine of the scapula. It is one of the four rotator cuff muscles and also abducts the arm at the shoulder. The spine of the scapula separates the supraspinatus muscle from the infraspinatus muscle, which originates below the spine. [WP,unvetted]. EHDAA2:0001967 @@ -176885,35 +176827,35 @@ supraspinatus muscle http://upload.wikimedia.org/wikipedia/commons/9/99/Arm_muscles_back_numbers.png - + - + - + - + Wikipedia - + supraspinous fossa of the scapula dbpedia - + middle facet of greater tubercle of the humerus dbpedia @@ -177170,7 +177112,7 @@ - + @@ -177233,14 +177175,14 @@ http://upload.wikimedia.org/wikipedia/commons/3/3b/Veins.jpg https://upload.wikimedia.org/wikipedia/commons/5/50/Forearm_labeled.png - + - + MA @@ -177546,7 +177488,7 @@ - + @@ -177584,14 +177526,14 @@ manual digit - + - + PHENOSCAPE:ni @@ -177655,8 +177597,8 @@ - - + + @@ -177704,24 +177646,24 @@ hematopoietic system - + - + - + FMA - + definitional @@ -178128,15 +178070,23 @@ - + + + + - - + + + + + + + @@ -178183,25 +178133,14 @@ bile duct http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png - - - - - + - - EMAPA - MA - - - - - + XAO @@ -178529,15 +178468,15 @@ - - + + - + @@ -178588,15 +178527,15 @@ maxilla http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png - + - + - + @@ -178615,20 +178554,20 @@ - + facial series ISBN:0073040584 - + FMA-abduced-lr - + EHDAA2 @@ -178854,8 +178793,8 @@ - - + + The double layer of peritoneum that extends from the liver to the lesser curvature of the stomach and the start of the duodenum. [WP,unvetted]. A membranous extension of the peritoneum from the peritoneal layers covering the ventral and the dorsal surfaces of the stomach and the first part of the duodenum. The lesser omentum extends from the portal fissure of the liver to the diaphragm, where the layers separate to enclose the end of the esophagus. It also forms two ligaments, one associated with the liver, the hepatogastric ligament, and the other, the heptatoduodenal ligament, with the duodenum. [TFD][VHOG] EHDAA2:0000991 @@ -178878,24 +178817,24 @@ lesser omentum http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray984.png - + - + - + MA - + EHDAA2 Wikipedia @@ -179050,7 +178989,7 @@ - + @@ -179094,14 +179033,14 @@ visceral pleura - + - + FMA @@ -179175,7 +179114,7 @@ - + @@ -179220,14 +179159,14 @@ pleural cavity http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png - + - + Wikipedia @@ -179287,7 +179226,7 @@ - + An intercostal muscle that aids in forced expiration (quiet expiration is a passive process). Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG] @@ -179309,14 +179248,14 @@ internal intercostal muscle http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png - + - + EHDAA2 @@ -179504,7 +179443,7 @@ - + A double-walled sac containing the heart and the roots of the great vessels. FMA:9868 RETIRED_EHDAA2:0001443 @@ -179516,14 +179455,14 @@ pericardial sac http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png - + - + FMA @@ -179540,7 +179479,7 @@ - + @@ -179596,14 +179535,14 @@ pericardium http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png - + - + MA @@ -179793,7 +179732,7 @@ - + @@ -179848,7 +179787,7 @@ autonomic nervous system http://upload.wikimedia.org/wikipedia/commons/f/f7/Gray839.png - + @@ -179861,7 +179800,7 @@ - + EMAPA MA NIFSTD @@ -179977,8 +179916,8 @@ - - + + @@ -180008,11 +179947,11 @@ clitoris http://upload.wikimedia.org/wikipedia/commons/c/cf/Clitoris_anatomy_labeled-en.svg - + - + @@ -180025,13 +179964,13 @@ - + MA - + EHDAA2 Wikipedia @@ -180864,8 +180803,8 @@ - - + + Hippocampus (proper) plus dentate gyrus and subiculum[definition derived from NIF comments and ontology alignment]. The term hippocampus is often used synonymously with hippocampal formation which consists of the hippocampus proper or Cornu Ammonis, the dentate gyrus and the subiculum @@ -180903,25 +180842,25 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + - + MBA-indirect NIFSTD - + Wikipedia:Hippocampus @@ -181023,7 +180962,7 @@ - + @@ -181084,14 +181023,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + EHDAA2 @@ -181321,7 +181260,7 @@ - + An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues. consider including separate class for developmental structure (adult human is stratified; in EHDAA2 is unilaminar) The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds[ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24]. @@ -181347,14 +181286,14 @@ oral epithelium - + - + AAO-modified @@ -181417,8 +181356,8 @@ - - + + @@ -181444,24 +181383,24 @@ visceral serous pericardium - + - + - + cjm - + FMA @@ -181956,7 +181895,7 @@ - + @@ -182009,14 +181948,14 @@ pars intermedia of adenohypophysis http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray1181.png - + - + FMA ZFA @@ -182206,7 +182145,7 @@ - + @@ -182289,14 +182228,14 @@ pituitary stalk http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG - + - + NIFSTD FMA MA @@ -182512,9 +182451,9 @@ - - - + + + @@ -182565,34 +182504,34 @@ striatum http://upload.wikimedia.org/wikipedia/commons/3/33/BrainCaudatePutamen.svg - + - + - + - + GO - + BTO - + NIFSTD @@ -182697,7 +182636,7 @@ - + The visual area of the brain that is specialized for processing information about static and moving objects. The primary visual cortex, which is defined by its function or stage in the visual system, is approximately equivalent to the striate cortex, also known as Brodmann area 17, which is defined by its anatomical location. BAMS:17 BAMS:V1 @@ -182731,14 +182670,14 @@ In some species, parcellations of lobes are not well defined if at all. The primary visual cortex being part of the occiptal lobe hence could refer to it being part of the most posterior region of the mammalian cerebral cortex. primary visual cortex - + - + WP @@ -182942,7 +182881,7 @@ - + A nucleus of brain that is part of a ventral tegmental area. @@ -182993,14 +182932,14 @@ ventral tegmental nucleus - + - + DHBA EMAPA MA @@ -183211,7 +183150,7 @@ - + @@ -183257,14 +183196,14 @@ myenteric nerve plexus - + - + FMA @@ -184146,7 +184085,7 @@ - + @@ -184191,7 +184130,7 @@ decidua http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray33.png - + @@ -184204,7 +184143,7 @@ - + maternal MA @@ -184289,7 +184228,7 @@ - + The mucous secreting gland associated with the mucuous membrane lining the uterus. simple or branched tubular @@ -184316,7 +184255,7 @@ endometrial gland http://upload.wikimedia.org/wikipedia/commons/2/28/Gray1169.png - + @@ -184329,7 +184268,7 @@ - + Wikipedia:Tubular_gland @@ -184957,7 +184896,7 @@ - + Any skeletal muscle organ that is part of a anterior abdominal wall. Examples: the obliques, pyramidalis and transversus abdominus. EHDAA2:0000125 @@ -184972,7 +184911,7 @@ anterior abdominal wall muscle - + @@ -184985,7 +184924,7 @@ - + EHDAA2 @@ -185021,16 +184960,16 @@ - - + + - - + + A bundle of muscles and tendons that is paired and runs more or less vertically. It extends throughout the lumbar, thoracic and cervical regions, and lies in the groove to the side of the vertebral column. isa muscle organ in MA. BTO:0001652 @@ -185056,19 +184995,19 @@ erector spinae muscle group http://upload.wikimedia.org/wikipedia/commons/d/de/Gray1124.png - + - + - + - + @@ -185087,26 +185026,26 @@ - + dbpedia - + EHDAA2 - + Spinous processes of T1 and T2 thoracic vertebrae and the cervical vertebrae dbpedia - + Spinous processes of T1 and T2 thoracic vertebrae and the cervical vertebrae dbpedia @@ -185179,10 +185118,10 @@ - - - - + + + + Any of the posterior thigh muscles. [WP,modified]. check FMA, singular. UBERON:0008538 @@ -185212,45 +185151,45 @@ http://upload.wikimedia.org/wikipedia/commons/b/bc/Biceps_femoris_muscle_long_head.PNG http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray1239.png - + - + - + - + - + sciatic nerve dbpedia - + dbpedia - + dbpedia - + dbpedia @@ -185374,7 +185313,7 @@ - + @@ -185423,14 +185362,14 @@ lymphoid system http://upload.wikimedia.org/wikipedia/commons/b/b3/TE-Lymphatic_system_diagram.svg - + - + FMA @@ -185868,7 +185807,7 @@ - + @@ -185918,14 +185857,14 @@ autopod region - + - + definitional @@ -186223,8 +186162,8 @@ - - + + A composite structure of the brain stem, which is subdivided into the superior cerebellar peduncle of pons, the decussation of superior cerebellar peduncle and the superior cerebellar peduncle of midbrain (MM)[NIF, based on NN]. TODO - this requires work for making consistent with ABA, which strictly separates cerebellum from brainstem. in MA, cerebellar peduncle is part of both brainstem and cerebellar white matter. BAMS:cbp @@ -186247,24 +186186,24 @@ cerebellar peduncular complex - + - + - + NIF-isa - + MA @@ -186607,7 +186546,7 @@ - + The more medial segment of the globus pallidus. @@ -186670,14 +186609,14 @@ medial globus pallidus https://upload.wikimedia.org/wikipedia/commons/e/ee/Brain_structure.gif - + - + MA @@ -186939,7 +186878,7 @@ - + @@ -186992,14 +186931,14 @@ orbitosphenoid http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png - + - + FMA-abduced-lr @@ -187154,7 +187093,7 @@ - + The main division of the lateral geniculate body; consists of two magnocellular layers [TA] (strata magnocellularia [TA]) and four parvocellular layers [TA] (strata parvocellularia [TA]) and serves as a processing station in the major pathway from the retina to the cerebral cortex, receiving fibers from the optic tract and giving rise to the geniculocalcarine radiation to the visual cortex in the occipital lobe. @@ -187186,14 +187125,14 @@ UBERON:0002479 dorsal lateral geniculate nucleus - + - + NIFSTD @@ -187809,7 +187748,7 @@ - + @@ -187834,14 +187773,14 @@ prostate duct https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.2/assets/3d-vh-m-prostate.glb - + - + PMID:18977204 @@ -187993,7 +187932,7 @@ - + The helix is the prominent rim of the pinna. FMA:60992 MA:0002793 @@ -188012,14 +187951,14 @@ helix of outer ear - + - + Wikipedia-uncited @@ -188142,7 +188081,7 @@ - + A suture that connects the two frontal bones of the skull. in humans, the frontal suture is a dense connective tissue structure that divides the two halves of the frontal bone of the skull in infants and children. It usually disappears by the age of six, with the two halves of the frontal bone being fused together. If it does not disappear it may be called a 'metopic suture' or 'sutura frontalis persistens. ' If the suture is not present at birth (craniosynostosis) it will cause a keel-shaped deformity of the skull called 'trigonocephaly. ' It is present in a fetal skull so that the skull can bend and is very elastic at the time of birth. The baby's head literally bends when coming out of the mother's womb. The space is filled as the child grows older. [WP,unvetted] EMAPA:19226 @@ -188164,14 +188103,14 @@ http://upload.wikimedia.org/wikipedia/commons/1/17/Gray134.png https://upload.wikimedia.org/wikipedia/commons/d/d1/Frontal_suture.png - + - + two halves of the frontal bone @@ -188233,7 +188172,7 @@ - + @@ -188267,14 +188206,14 @@ lambdoid suture https://upload.wikimedia.org/wikipedia/commons/3/3d/Gray188-Lambdoid_suture.png - + - + HP @@ -188323,7 +188262,7 @@ - + The dense, fibrous connective tissue joint between the tetrapod parietal bones. EMAPA:19224 FMA:52929 @@ -188338,14 +188277,14 @@ sagittal suture http://upload.wikimedia.org/wikipedia/commons/2/24/Kort-lang-skalle.gif - + - + both parietals @@ -188391,7 +188330,7 @@ - + @@ -188431,14 +188370,14 @@ uterine artery http://upload.wikimedia.org/wikipedia/commons/a/ae/Gray1170.png - + - + FMA-abduced-lr @@ -188616,7 +188555,7 @@ - + @@ -188637,14 +188576,14 @@ stapes base - + - + MA @@ -188891,7 +188830,7 @@ - + @@ -188913,14 +188852,14 @@ cochlear labyrinth http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png - + - + FMA @@ -188944,7 +188883,7 @@ - + The bony arch in vertebrates that extends along the side or front of the skull beneath the eye socket and is formed by the temporal process of the zygomatic bone and the zygomatic process of the temporal bone. The zygomatic arch is significant in evolutionary biology, as it is part of the structures derived from the ancestral single temporal fenestra of the synapsid ancestor of mammals. The zygomatic process of the temporal arises by two roots: an anterior, directed inward in front of the mandibular fossa, where it expands to form the articular tubercle. a posterior, which runs backward above the external acoustic meatus and is continuous with the supramastoid crest. The upper border of the arch gives attachment to the temporal fascia; the lower border and medial surface give origin to the Masseter @@ -188967,7 +188906,7 @@ zygomatic arch https://upload.wikimedia.org/wikipedia/commons/f/f4/Gray188-Sphenozygomatic_suture.png - + @@ -188980,7 +188919,7 @@ - + FMA-abduced-lr @@ -189137,7 +189076,7 @@ - + The greater trochanter (great trochanter) of the femur is a large, irregular, quadrilateral eminence and a part of the skeletal system. It is directed a little lateralward and backward, and, in the adult, is about 1 cm lower than the head. Because the pelvic outlet in the female is larger than in the male, there is a greater distance between the greater trochanters in the female. It has two surfaces and four borders. [WP,unvetted]. EMAPA:37594 FMA:32852 @@ -189155,14 +189094,14 @@ greater trochanter http://upload.wikimedia.org/wikipedia/commons/9/97/Gray243.png - + - + FMA @@ -189197,7 +189136,7 @@ - + The lesser trochanter (small trochanter) of the femur is a conical eminence, which varies in size in different subjects [WP,unvetted]. EMAPA:37595 FMA:32853 @@ -189215,14 +189154,14 @@ lesser trochanter http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray341.png - + - + FMA @@ -189302,14 +189241,22 @@ - + + + + - - + + + + + + + @@ -189334,11 +189281,7 @@ iris epithelium - - - - - + @@ -189351,13 +189294,7 @@ - - MA - - - - - + MP @@ -189738,7 +189675,7 @@ - + @@ -189765,14 +189702,14 @@ trabecula carnea - + - + WP @@ -189848,7 +189785,7 @@ - + @@ -189893,7 +189830,7 @@ corpus luteum http://upload.wikimedia.org/wikipedia/commons/5/57/Folliclesinovary.jpg - + @@ -189906,7 +189843,7 @@ - + MA @@ -189965,7 +189902,7 @@ - + @@ -189998,7 +189935,7 @@ https://github.com/obophenotype/uberon/wiki/Modeling-endochondral-elements-Design-Pattern http://upload.wikimedia.org/wikipedia/commons/e/ee/Hypertrophic_Zone_of_Epiphyseal_Plate.jpg - + @@ -190011,7 +189948,7 @@ - + VSAO @@ -190639,8 +190576,8 @@ - - + + @@ -190665,11 +190602,11 @@ tunica media https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg - + - + @@ -190682,13 +190619,13 @@ - + cjm - + cjm @@ -190724,8 +190661,8 @@ - - + + The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong]. the FMA class represents a more generic layer which is the superclass of the layer found in both blood vessels and lymph vessels (and also endocardium) - we should probably follow this structure @@ -190750,11 +190687,11 @@ tunica intima https://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg - + - + @@ -190767,13 +190704,13 @@ - + check for exceptions, e.g. capillaries - + ISBN:0073040584 @@ -191544,7 +191481,7 @@ - + @@ -191561,7 +191498,7 @@ paired fin - + @@ -191574,7 +191511,7 @@ - + PHENOSCAPE:wd ZFA @@ -191840,8 +191777,8 @@ - - + + One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches. One of a series of bony or cartilaginous arches that develop in the walls of the mouth cavity and pharynx of the embryo.[AAO] A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down.[well established][VHOG] @@ -191876,11 +191813,11 @@ pharyngeal arch http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray41.png - + - + @@ -191893,13 +191830,13 @@ - + PMID:16313389 - + PMID:16313389 @@ -192356,7 +192293,7 @@ - + Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. Do not merge with neurogenic placode Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons @@ -192374,7 +192311,7 @@ cranial placode - + @@ -192387,7 +192324,7 @@ - + PMID:11523831 PMID:22512454 @@ -192666,7 +192603,7 @@ - + The Anterior trigeminothalamic tract (or ventral trigeminothalamic tract) serves as pain, temperature, and light touch pathway from the face, head and neck. It receives input from trigeminal nerve, facial nerve, glossopharyngeal nerve and vagus nerve. It receives discriminative tactile and pressure input from the contralateral principal sensory nucleus of CN V, which terminates in the ventral posteromedial nucleus of the thalamus. It then ascends to the contralateral sensory cortex via three neurons . BAMS:v5 @@ -192692,14 +192629,14 @@ ventral trigeminal tract - + - + FMA @@ -192887,7 +192824,7 @@ - + The largest and most prominent of the cell groups of the medial longitudinal fasciculus. ICjl @@ -192918,14 +192855,14 @@ UBERON:0002551 interstitial nucleus of Cajal - + - + FMA @@ -193270,7 +193207,7 @@ - + BAMS:cte BAMS:ctt BIRNLEX:1016 @@ -193288,7 +193225,7 @@ UBERON:0002556 corticotectal tract - + @@ -193301,7 +193238,7 @@ - + NIFSTD @@ -193358,8 +193295,8 @@ - - + + Li BIRNLEX:1018 DHBA:12230 @@ -193372,24 +193309,24 @@ The mesocorticolimbic dopamine (DA) system plays important roles in reward, motivation, learning, memory, and movement. This system arises from the A10 region, comprising the ventral tegmental area and three adjacent midline nuclei (caudal linear nucleus, interfascicular nucleus, and rostral linear nucleus of the raphe)[PMID:21653852] linear nucleus - + - + - + FMA - + PMID:21653852 @@ -194766,7 +194703,7 @@ - + The reticular formation is a part of the brain that is involved in actions such as awaking/sleeping cycle, and filtering incoming stimuli to discriminate irrelevant background stimuli. It is essential for governing some of the basic functions of higher organisms, and is one of the phylogenetically oldest portions of the brain. [WP,unvetted]. BAMS:PRF BAMS:PRN @@ -194794,14 +194731,14 @@ pontine reticular formation http://upload.wikimedia.org/wikipedia/commons/9/9b/Gray701.png - + - + FMA @@ -195476,7 +195413,7 @@ - + A commissure that is part of a superior colliculus [Automatically generated definition]. BAMS:SCC @@ -195512,14 +195449,14 @@ commissure of superior colliculus - + - + NIFSTD-modified @@ -195766,7 +195703,7 @@ - + The calcarine fissure is an anatomical landmark located at the caudal end of the medial surface of the brain. [WP,unvetted]. CCS BIRNLEX:1086 @@ -195786,14 +195723,14 @@ calcarine sulcus - + - + NIFSTD @@ -195944,7 +195881,7 @@ - + @@ -195980,14 +195917,14 @@ decussation of superior cerebellar peduncle http://upload.wikimedia.org/wikipedia/commons/2/26/Gray711.png - + - + FMA @@ -196080,8 +196017,8 @@ - - + + Part of the corticospinal tract located in the spinal cord, formed as 75 to 90% of the corticospinal fibers cross to the opposite side of the brainstem in the pyramidal decussation. This tract descends the length of the spinal cord in the lateral white column (Adapted from Brain Info). BAMS:lcsp BAMS:py @@ -196112,11 +196049,11 @@ lateral corticospinal tract http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg - + - + @@ -196129,13 +196066,13 @@ - + FMA - + NIFSTD @@ -196232,7 +196169,7 @@ - + Prepyriform area (or prepiriform cortex) is a portion of the rhinencephalon consisting of paleocortex. Some sources state that it is part of the primary olfactory cortex. @@ -196266,14 +196203,14 @@ prepyriform area - + - + NIFSTD @@ -196540,7 +196477,7 @@ - + Fibers interconnecting the cerebellum and vestibular nuclei, traveling medial to the restiform body (inferior cerebellar peduncle) (Nolte, The Human Brain, 6th ed., pg 497). BAMS:jrb BAMS:jx @@ -196558,14 +196495,14 @@ juxtarestiform body http://upload.wikimedia.org/wikipedia/commons/f/fc/Gray677.png - + - + NIFSTD @@ -196842,7 +196779,7 @@ - + Part of thalamus receiving primary somatic sensory information via the medial lemniscal pathway that projects to the primary somatosensory cortex (adapted from Paxinos, The Rat Nervous System, 2nd Ed, Academic Press, 1995). VP BAMS:VP @@ -196876,14 +196813,14 @@ ventral posterior nucleus of thalamus http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + FMA @@ -197001,8 +196938,8 @@ - - + + The principal sensory nucleus (or chief sensory nucleus of V) is a group of second order neurons which have cell bodies in the dorsal Pons. It receives information about discriminative sensation and light touch of the face as well as conscious proprioception of the jaw via first order neurons of CN V. Most of the sensory information crosses the midline and travels to the contralateral ventral posteriomedial (VPM) of the thalamus via the Ventral Trigeminothalamic Tract, but information of the oral cavity travels to the ipsilateral Ventral Posteriomedial (VPM) of the thalamus via the Dorsal Trigeminothalamic Tract. [WP,unvetted]. @@ -197055,11 +196992,11 @@ principal sensory nucleus of trigeminal nerve http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png - + - + @@ -197072,13 +197009,13 @@ - + NIF - + Wikipedia @@ -197488,7 +197425,7 @@ - + A small paired band that passes around the splenium of the corpus callosum from the lateral longitudinal stria to the dentate gyrus[Biology-Online]. A posterior and upward extension of the dentate gyrus, forming a transitional area between the dentate gyrus and the indusium griseum[BTO]. TODO - existing definitions, synonyms and relationships in existing AOs seem contradictory; to be resolved. We take the dentate gyrus relationship from BTO, and it is also implied by the FMA synonym. However, FMA says archiortex (embryonic archicortex corresponds to the cortex of the dentate gyrus and hippocampus) and NIF says limbic lobe (which is more general than hippocampus). ABA xref made on basis of BTO related synonym @@ -197517,14 +197454,14 @@ UBERON:0002601 fasciolar gyrus - + - + NIFSTD @@ -197845,7 +197782,7 @@ - + The lateral lemniscus is a tract of axons in the brainstem that carries information about sound from the cochlear nucleus to various brainstem nuclei and ultimately the contralateral inferior colliculus of the midbrain. Three distinct, primarily inhibitory, cellular groups are located interspersed within these fibers, and are thus named the nuclei of the lateral lemniscus. [WP,unvetted]. BAMS:NLLv @@ -197871,14 +197808,14 @@ ventral nucleus of lateral lemniscus https://upload.wikimedia.org/wikipedia/commons/4/44/Lateral_lemniscus.PNG - + - + FMA NIF @@ -198273,7 +198210,7 @@ - + The cochlear nuclei consist of: (a) the dorsal cochlear nucleus, corresponding to the tuberculum acusticum on the dorso-lateral surface of the inferior peduncle; and (b) the ventral or accessory cochlear nucleus, placed between the two divisions of the nerve, on the ventral aspect of the inferior peduncle. [WP,unvetted]. @@ -198301,14 +198238,14 @@ cochlear nuclear complex http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png - + - + MA FMA @@ -199250,8 +199187,8 @@ - - + + Part of hypothalamus consisting of hollow eminence of gray matter situated between the mammilary bodies and the optic chiasm visible on the basal surface of the brain (adapted from Wikipedia). TBCN BAMS:TuCn @@ -199284,24 +199221,24 @@ tuber cinereum http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray724.png - + - + - + MA - + FMA @@ -199698,7 +199635,7 @@ - + Component of the inferior frontal gyrus.defined as the first gyrus from the precentral gyrus.the remainder of the inferior frontal gyrus once the pars opercularis and triangularis have been defined (Christine Fennema-Notestine)., NeuroNames. pars orbitalis, inferior frontal gyrus @@ -199720,14 +199657,14 @@ orbital part of inferior frontal gyrus - + - + FMA @@ -199794,8 +199731,8 @@ - - + + The median preoptic nucleus is located along the midline in a position significantly dorsal to the other 3 preoptic nuclei, at least in the macaca fascicularis brain. It wraps around the top (dorsal), front, and bottom (ventral) surfaces of the anterior commissure. The median preoptic nucleus generates thirst. Drinking decreases noradrenaline release in the median preoptic nucleus. @@ -199824,24 +199761,24 @@ median preoptic nucleus - + - + - + Wikipedia - + Wikipedia @@ -200133,7 +200070,7 @@ - + Component of the inferior frontal gyrus.defined as the second gyrus from the precentral gyrus (Christine Fennema-Notestine). BAMS:IFGTr @@ -200158,14 +200095,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + FMA @@ -200316,8 +200253,8 @@ - - + + The cerebral crus is the anterior portion of the cerebral peduncle which contains the motor tracts, the plural of which is cerebral crura. In some older texts, it is used as a synonym for the entire cerebral peduncle, not just the anterior portion of it. [WP,unvetted]. CCR BAMS:cp @@ -200351,24 +200288,24 @@ cerebral crus http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png - + - + - + BTO - + FMA-abduced-lr @@ -200510,7 +200447,7 @@ - + MML BAMS:MMM @@ -200536,14 +200473,14 @@ UBERON:0002632 medial part of medial mammillary nucleus - + - + NIFSTD @@ -200631,8 +200568,8 @@ - - + + @@ -200693,24 +200630,24 @@ motor nucleus of trigeminal nerve http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png - + - + - + MA - + NIF @@ -200901,7 +200838,7 @@ - + A loose heterogeneous collection of cells in the anterior hypothalamus, continuous rostrally with the medial and lateral preoptic areas and caudally with the tuber cinereum. @@ -200942,14 +200879,14 @@ anterior nucleus of hypothalamus http://upload.wikimedia.org/wikipedia/commons/8/8c/HypothalamicNuclei.PNG - + - + WP @@ -201121,7 +201058,7 @@ - + LPul BAMS:LPul @@ -201139,14 +201076,14 @@ UBERON:0002636 lateral pulvinar nucleus - + - + FMA @@ -201212,7 +201149,7 @@ - + The ventral anterior nucleus is a nucleus of the thalamus. VA @@ -201246,14 +201183,14 @@ ventral anterior nucleus of thalamus http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + BTO FMA NIF @@ -201921,7 +201858,7 @@ - + MDD BIRNLEX:1255 DHBA:10399 @@ -201935,14 +201872,14 @@ UBERON:0002645 densocellular part of medial dorsal nucleus - + - + NIFSTD @@ -202100,7 +202037,7 @@ - + See https://github.com/obophenotype/uberon/issues/2229 MDM BIRNLEX:1262 @@ -202126,14 +202063,14 @@ UBERON:0002647 magnocellular part of medial dorsal nucleus - + - + FMA @@ -202295,7 +202232,7 @@ - + Part of Lissauer's tract located in the medulla. resolve distinction between Lissauer's tract and the medullary component BAMS:d1 @@ -202322,7 +202259,7 @@ dorsolateral fasciculus of medulla - + @@ -202335,7 +202272,7 @@ - + FMA @@ -202422,7 +202359,7 @@ - + MDPL BAMS:MDPL BIRNLEX:1276 @@ -202446,14 +202383,14 @@ UBERON:0002650 paralaminar part of medial dorsal nucleus - + - + FMA @@ -202864,7 +202801,7 @@ - + MDPC BAMS:MDPC BIRNLEX:1283 @@ -202891,14 +202828,14 @@ UBERON:0002654 parvocellular part of medial dorsal nucleus - + - + FMA NIFSTD @@ -203141,7 +203078,7 @@ - + consider splitting BAMS:PA BAMS:PAM @@ -203172,14 +203109,14 @@ UBERON:0002656 periamygdaloid area - + - + FMA @@ -203295,7 +203232,7 @@ - + The posterior parahippocampal gyrus is a portion of the parahippocampal gyrus. It can show deterioration in Alzheimer's disease. @@ -203317,14 +203254,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + FMA @@ -203385,9 +203322,9 @@ - - - + + + Part of medial lemniscus located within the midbrain. MLMB BAMS:mlmb @@ -203402,15 +203339,15 @@ UBERON:0002658 medial lemniscus of midbrain - + - + - + @@ -203423,19 +203360,19 @@ - + FMA - + NIFSTD - + NIFSTD @@ -203842,7 +203779,7 @@ - + Collection of nerve cells in the medial forebrain lying generally in front of the anterior commissure (Maryann Martone). Any of the groups of neural nuclei situated in the septal region which have afferent and cholinergic efferent connections with a variety of forebrain and brainstem areas including the hippocampus, the lateral hypothalamus, the tegmentum, and the amygdala. The septal nuclei are structures in the middle anteroventral cerebrum that are composed of medium-size neurons grouped into medial, lateral, and posterior groups. The septal nuclei receive reciprocal connections from the olfactory bulb, hippocampus, amygdala, hypothalamus, midbrain, habenula, cingulate gyrus, and thalamus. The septal nuclei play a role in reward and reinforcement along with the nucleus accumbens. In the 1950s, Olds &amp; Milner showed that rats with electrodes implanted in this area will self-stimulate repeatedly in order to experience a euphoric feeling (i.e. press a bar to receive electrical current that will stimulate the neurons). [WP,unvetted][Wikipedia:Septal_nuclei]. @@ -203868,14 +203805,14 @@ septal nuclear complex - + - + NIFSTD @@ -203940,7 +203877,7 @@ - + MML BAMS:ML BAMS:MML @@ -203964,14 +203901,14 @@ UBERON:0002664 lateral part of medial mammillary nucleus - + - + NIFSTD @@ -204058,7 +203995,7 @@ - + BAMS:HiS BAMS:SCG BAMS:Supracallosal_gyrus @@ -204076,7 +204013,7 @@ supracallosal gyrus - + @@ -204089,7 +204026,7 @@ - + FMA @@ -204454,7 +204391,7 @@ - + BAMS:ahls BIRNLEX:1327 @@ -204476,7 +204413,7 @@ UBERON:0002669 anterior horizontal limb of lateral sulcus - + @@ -204489,7 +204426,7 @@ - + NIFSTD @@ -204590,7 +204527,7 @@ - + BAMS:aals BIRNLEX:1330 @@ -204614,7 +204551,7 @@ UBERON:0002670 anterior ascending limb of lateral sulcus - + @@ -204627,7 +204564,7 @@ - + NIFSTD @@ -204871,8 +204808,8 @@ - - + + Nuclear complex containing the vestibular nuclei. In TA they are grouped in both the pons and medulla; DHBA has 'vestibular nuclei of pons', with LVN and SVN underneath; WP+MA says the SVN is in the pons, and GO includes VNC development under pons development, but this is not supported by ABA. Todo - check with NIF. @@ -204908,18 +204845,18 @@ vestibular nuclear complex http://upload.wikimedia.org/wikipedia/commons/5/52/Gray691.png - + - + - + ABA FMA NIF @@ -204927,7 +204864,7 @@ - + Wikipedia:Vestibular_nuclei @@ -205094,7 +205031,7 @@ - + The ventral supraoptic decussation is the crossover point for signals from the left and right eye, en route respectively to the right and left sides of the visual cortex. Occupying the posterior part of the commissure of the optic chiasma is a strand of fibers, the Ventral supraoptic decussation (commissure of Gudden, Gudden's inferior commissure), which is not derived from the optic nerves; it forms a connecting link between the medial geniculate bodies. [WP,unvetted]. VSOX BAMS:supv @@ -205123,7 +205060,7 @@ ventral supraoptic decussation http://upload.wikimedia.org/wikipedia/commons/c/c0/Gray722.png - + @@ -205136,7 +205073,7 @@ - + FMA @@ -205322,7 +205259,7 @@ - + @@ -205355,14 +205292,14 @@ UBERON:0002679 anterodorsal nucleus of thalamus - + - + FMA NIFSTD @@ -205526,7 +205463,7 @@ - + @@ -205555,14 +205492,14 @@ UBERON:0002681 anteromedial nucleus of thalamus - + - + NIFSTD @@ -205672,7 +205609,7 @@ - + Nucleus located beneath the floor of the 4th ventricle in the pontine tegmentum, containing motor neurons innervating the lateral rectus muscle of the eye (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 533). @@ -205724,7 +205661,7 @@ abducens nucleus http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png - + @@ -205737,7 +205674,7 @@ - + ABA ZFA GO @@ -205923,7 +205860,7 @@ - + In the human brain, the rhinencephalon appears as a longitudinal elevation, with a corresponding internal furrow, on the under surface of the hemisphere close to the lamina terminalis; it is separated from the lateral surface of the hemisphere by a furrow, the external rhinal fissure (or rhinal sulcus), and is continuous behind with that part of the hemisphere, which will ultimately form the anterior end of the temporal lobe. [WP,unvetted]. RHS BAMS:rf @@ -205950,14 +205887,14 @@ rhinal sulcus http://upload.wikimedia.org/wikipedia/commons/c/ce/Gehirn,_basal_-_beschriftet_lat.svg - + - + NIFSTD @@ -206037,7 +205974,7 @@ - + The raphe obscurus projects to the cerebellar lobes VI and VII and to crus II along with the nucleus raphe pontis . This so called obscure nucleus has also been implicated in the modulation of the hypoglossal nerve. It has been observed that the ablation of this nucleus causes a change in the firing pattern in the XII nerve . In addition, the raphe obscurus mediates expiration via the inhibitory effect of serotonin and depresses periodic synaptic potentials . It has also been shown that this nucleus stimulates gastrointestinal motor function; microinjections of 5-HT into the n.r. obscurus increase gastric movement . [WP,unvetted]. @@ -206064,14 +206001,14 @@ nucleus raphe obscurus http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png - + - + FMA @@ -206157,7 +206094,7 @@ - + @@ -206196,14 +206133,14 @@ UBERON:0002685 anteroventral nucleus of thalamus - + - + NIFSTD @@ -206435,7 +206372,7 @@ - + X BIRNLEX:1379 DHBA:12653 @@ -206453,14 +206390,14 @@ UBERON:0002687 area X of ventral lateral nucleus - + - + FMA @@ -206620,8 +206557,8 @@ - - + + One of the circumventricular organs of the brain. The OVLT is outside the blood brain barrier, and so neurons in this region can respond to factors that are present in the systemic circulation. @@ -206659,11 +206596,11 @@ UBERON:0002689 supraoptic crest - + - + @@ -206676,13 +206613,13 @@ - + FMA - + Wikipedia @@ -206839,7 +206776,7 @@ - + @@ -206869,14 +206806,14 @@ UBERON:0002690 anteroventral periventricular nucleus - + - + FMA @@ -207189,8 +207126,8 @@ - - + + BAMS:RaM BIRNLEX:1420 FMA:68874 @@ -207206,24 +207143,24 @@ UBERON:0002692 medullary raphe nuclear complex - + - + - + FMA - + Wikipedia @@ -207769,7 +207706,7 @@ - + DSOX BAMS:dsox BAMS:supd @@ -207795,14 +207732,14 @@ UBERON:0002697 dorsal supraoptic decussation - + - + NIFSTD @@ -207990,7 +207927,7 @@ - + SOH BAMS:soh BIRNLEX:1440 @@ -208006,7 +207943,7 @@ UBERON:0002699 supraopticohypophysial tract - + @@ -208019,7 +207956,7 @@ - + FMA NIFSTD @@ -208147,7 +208084,7 @@ - + AM3 nucleus anteromedialis BAMS:AM3 @@ -208169,14 +208106,14 @@ UBERON:0002701 anterior median oculomotor nucleus - + - + NIFSTD @@ -208728,7 +208665,7 @@ - + The posterior nucleus of the hypothalamus is one of the many nuclei that make up the hypothalamic region of the brain. Its function is thermoregulation (heating) of the body. Damage or destruction of this nucleus causes hypothermia. @@ -208760,14 +208697,14 @@ UBERON:0002706 posterior nucleus of hypothalamus - + - + NIFSTD @@ -209032,7 +208969,7 @@ - + PPe BAMS:PPe BAMS:PVp @@ -209055,14 +208992,14 @@ UBERON:0002708 posterior periventricular nucleus - + - + NIFSTD @@ -209148,7 +209085,7 @@ - + Part of thalamus comprising ill defined cellular groups in the caudal thalamus at the meso-diencephalic junction. It is not a homogeneous structure but consists of several distinct cellular groups, including the suprageniculate and limitans nuclei, the magnocellular division of the medial geniculate body, portions of the pulvinar nucleus and an area of mixed cell types intercalated between the ventroposterior nucleus and the nucleus lateral posterior (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 97). ZFA grouping dubious @@ -209183,14 +209120,14 @@ posterior nuclear complex of thalamus - + - + FMA @@ -209550,7 +209487,7 @@ - + PMm BAMS:PM BAMS:PMm @@ -209566,7 +209503,7 @@ UBERON:0002712 premammillary nucleus - + @@ -209579,7 +209516,7 @@ - + FMA @@ -210141,7 +210078,7 @@ - + White matter tract arising in red nucleus and projecting to spinal cord ventral horn. BAMS:rs BAMS:rust @@ -210164,14 +210101,14 @@ http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg - + - + FMA NIF combined @@ -210376,7 +210313,7 @@ - + @@ -210403,14 +210340,14 @@ rostral interstitial nucleus of medial longitudinal fasciculus http://upload.wikimedia.org/wikipedia/commons/9/90/Gray710.png - + - + FMA NIF @@ -210566,7 +210503,7 @@ - + The spino-olivary tract is located in the ventral funiculus of the spinal cord. This tract carries proprioception information from muscles and tendons as well as cutaneous impulses to the olivary nucleus. [WP,unvetted]. BAMS:spo BIRNLEX:1484 @@ -210586,14 +210523,14 @@ spino-olivary tract - + - + Wikipedia @@ -210653,7 +210590,7 @@ - + White matter bundle in the posterior hypothalamus containing ascending afferent fibers to the mammillary bodies from the ventral and dorsal tegmental nuclei (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 671). MPE BAMS:mp @@ -210675,14 +210612,14 @@ UBERON:0002720 mammillary peduncle - + - + FMA @@ -210750,7 +210687,7 @@ - + A sulcus that divides the frontal lobe and parietal lobe above from the temporal lobe below. It is in both hemispheres of the brain but is longer in the left hemisphere. The lateral sulcus is one of the earliest-developing sulci of the human brain. It first appears around the fourteenth gestational week[WP,modified]. LS BAMS:lf @@ -210786,7 +210723,7 @@ lateral sulcus https://upload.wikimedia.org/wikipedia/commons/4/41/Lateral_sulcus2.png - + @@ -210799,7 +210736,7 @@ - + NIFSTD @@ -211116,7 +211053,7 @@ - + MPR BAMS:mpr BAMS:pm @@ -211135,7 +211072,7 @@ UBERON:0002723 mammillary princeps fasciculus - + @@ -211148,7 +211085,7 @@ - + FMA @@ -211456,7 +211393,7 @@ - + Thin sheet of white matter dividing the external and internal segments of the globus pallidus in primates. BAMS:mml @@ -211491,7 +211428,7 @@ UBERON:0002727 medial medullary lamina of globus pallidus - + @@ -211504,7 +211441,7 @@ - + FMA NIFSTD @@ -211668,15 +211605,15 @@ - - + + - + Component of the temporal lobe on the mesial surface. The rostral and caudal boundaries of the entorhinal cortex are the rostral end of the collateral sulcus and the caudal end of the amygdala respectively. The medial boundary is the medial aspect of the temporal lobe and the lateral boundary is the collateral sulcus. (DK). TODO - check area vs complex. MBA:909 this is part of the hippocampal formation via retrohippocampal region @@ -211716,34 +211653,34 @@ entorhinal cortex http://upload.wikimedia.org/wikipedia/commons/f/f8/Gray-Brodman-Entorhinal_Cortex_EC_.png - + - + - + - + FMA - + BTO - + BTO @@ -211833,8 +211770,8 @@ - - + + BAMS:ClA BAMS:VCl BIRNLEX:1515 @@ -211851,24 +211788,24 @@ UBERON:0002729 claustral amygdaloid area - + - + - + FMA - + NIF @@ -211973,7 +211910,7 @@ - + @@ -211998,14 +211935,14 @@ UBERON:0002731 vestibulocochlear nerve root - + - + FMA @@ -212065,7 +212002,7 @@ - + BAMS:lfp BAMS:lp BIRNLEX:1523 @@ -212085,7 +212022,7 @@ UBERON:0002732 longitudinal pontine fibers - + @@ -212098,7 +212035,7 @@ - + NIFSTD @@ -212401,7 +212338,7 @@ - + BAMS:tfp BAMS:tpf BIRNLEX:1535 @@ -212422,7 +212359,7 @@ UBERON:0002735 transverse pontine fibers - + @@ -212435,7 +212372,7 @@ - + NIFSTD @@ -212833,7 +212770,7 @@ - + The medial dorsal nucleus (or dorsomedial nucleus of thalamus) is a large nucleus in the thalamus. It receives inputs from the Pre-Frontal Cortex and the Limbic System and in turn relays them to the Pre-Frontal Association Cortex. As a result, it plays a crucial role in attention, planning, organization, abstract thinking, multi-tasking and active memory. The connections of the medial dorsal nucleus have even been used to delineate the prefrontal cortex of the Göttingen minipig brain. By stereology the number of brain cells in the region has been estimated to around 6.43 million neurons in the adult human brain and 36.3 million glial cells, and with the newborn having quite different numbers: around 11.2 million neurons and 10.6 million glial cells. Lesions of the medial dorsal nucleus have been associated with Wernicke's encephalopathy [WP,unvetted]. @@ -212890,14 +212827,14 @@ medial dorsal nucleus of thalamus http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + Wikipedia @@ -213189,7 +213126,7 @@ - + A white fibre bundle descending in the precommissural septum toward the base of the forebrain, immediately rostral to the lamina terminalis; at the base, the bundle turns in the caudolateral direction; traveling through the ventral substantia innominata alongside the optic tract, it fades before reaching the amygdala. BAMS:db BIRNLEX:1551 @@ -213226,14 +213163,14 @@ diagonal band of Broca http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray724.png - + - + FMA @@ -213380,7 +213317,7 @@ - + @@ -213410,14 +213347,14 @@ lamina of septum pellucidum - + - + FMA @@ -213476,7 +213413,7 @@ - + A region of the brain consisting of ventral and rostral subcortical regions of the telencephalon, including among others, the basal ganglia, septal nuclei, amygdala, ventral pallidum, substantia innominata, and basal nucleus of Meynert. BAMS:Basal_forebrain @@ -213499,14 +213436,14 @@ basal forebrain http://upload.wikimedia.org/wikipedia/commons/a/a4/Basal_Forebrain_Monakhos_2007.png - + - + BTO @@ -213548,7 +213485,7 @@ - + The mouth of the flasklike dentate nucleus of the cerebellum, directed inward (rostromedial), and giving exit to many of the fibers that compose the superior cerebellar peduncle or brachium conjunctivum. BAMS:hdt BIRNLEX:1561 @@ -213562,7 +213499,7 @@ UBERON:0002744 hilum of dentate nucleus - + @@ -213575,7 +213512,7 @@ - + NIFSTD @@ -213622,7 +213559,7 @@ - + BAMS:vaf BIRNLEX:1563 FMA:61977 @@ -213634,7 +213571,7 @@ UBERON:0002745 ventral amygdalofugal projection - + @@ -213647,7 +213584,7 @@ - + FMA @@ -213690,7 +213627,7 @@ - + IPe BAMS:IPe BAMS:PVI @@ -213709,14 +213646,14 @@ UBERON:0002746 intermediate periventricular nucleus - + - + NIFSTD @@ -213846,8 +213783,8 @@ - - + + Part of medial lemniscus located within the medulla. BAMS:mlm BIRNLEX:1570 @@ -213860,11 +213797,11 @@ UBERON:0002748 medial lemniscus of medulla - + - + @@ -213877,14 +213814,14 @@ - + FMA NIFSTD - + NIFSTD @@ -214068,7 +214005,7 @@ - + Component of the temporal lobe, lateral aspect. The rostral boundary is the rostral extent of the inferior temporal sulcus whereas the caudal boundary is designated as the temporo-occipital incisure on the cortical surface. The occipitotemporal sulcus is the medial boundary and the inferior temporal sulcus is the lateral boundary (Christine Fennema-Notestine). BAMS:ITG @@ -214096,14 +214033,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + Wikipedia @@ -214249,7 +214186,7 @@ - + It ascends the dorsal part of the lateral funiculus and enters the cerebellum via the restiform body. Within the cerebellum, its axons terminate in the ipsilateral hindlimb area of the anterior lobe and in the pyramis and the paramedian lobule predominantly ipsilaterally. Rostrally, it extends to lobules I and II. Afferents from the upper trunk, forelimbs, and the neck to the cerebellum. The dorsal spinocerebellar tract (posterior spinocerebellar tract, Flechsig's fasciculus, Flechsig's tract) conveys proprioceptive information from the body to the cerebellum. It is part of the somatosensory system and runs in parallel with the ventral spinocerebellar tract. Proprioceptive information is taken to the via central processes of dorsal root ganglia (first order neurons). These central processes travel through the dorsal horn where they synapse with second order neurons of Clarke's nucleus. Axon fibers from Clarke's Nucleus convey this proprioceptive information in the spinal cord in the peripheral region of the posteriolateral funiculus ipsilaterally until it reaches the cerebellum, where unconscious proprioceptive information is processed. This tract involves two neurons and ends up on the same side of the body. [WP,unvetted][Wikipedia:Dorsal_spinocerebellar_tract]. @@ -214275,14 +214212,14 @@ http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg - + - + Wikipedia @@ -214417,7 +214354,7 @@ - + @@ -214459,7 +214396,7 @@ pyramidal decussation http://upload.wikimedia.org/wikipedia/commons/a/ac/Gray684.png - + @@ -214472,7 +214409,7 @@ - + NIFSTD @@ -215086,8 +215023,8 @@ - - + + Part of pyramidal tract (corticospinal tract) containing uncrossed fibers and traveling in the ventral funiculus of the spinal cord. BAMS:vcsp BIRNLEX:1618 @@ -215122,24 +215059,24 @@ ventral corticospinal tract http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg - + - + - + NIFSTD - + modified part_of to overlaps NIFSTD @@ -215480,7 +215417,7 @@ - + Thin bundle of myelinated axons that divides the medial pallidal segment into outer and inner portions (Carpenter, Core Text of Neuroanatomy, 3rd ed., 1985, pg. 303). BAMS:aml @@ -215505,7 +215442,7 @@ UBERON:0002763 accessory medullary lamina of globus pallidus - + @@ -215518,7 +215455,7 @@ - + NIFSTD @@ -215690,7 +215627,7 @@ - + The lateral medullary lamina is a thin white structure located in the basal ganglia of the primate brain. Bounded laterally by the putamen and medially by the globus pallidus, it is defined on the basis of Nissl or myelin stain ( Carpenter-1983 ). BAMS:lml BIRNLEX:1634 @@ -215726,7 +215663,7 @@ UBERON:0002765 lateral medullary lamina of globus pallidus - + @@ -215739,7 +215676,7 @@ - + FMA NIFSTD @@ -216076,8 +216013,8 @@ - - + + A long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the vestibular nucleus of the pons towards target cells in the spinal cord[GO]. BAMS:vs BIRNLEX:1643 @@ -216101,11 +216038,11 @@ http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg - + - + @@ -216118,14 +216055,14 @@ - + weakened NIFSTD - + weakened NIFSTD @@ -216659,7 +216596,7 @@ - + A pathway that terminates on the hair cells of the cochlea or equivalent organ in the inner ear. BAMS:ocb BIRNLEX:1666 @@ -216677,7 +216614,7 @@ UBERON:0002775 olivocochlear bundle - + @@ -216690,7 +216627,7 @@ - + FMA @@ -216930,8 +216867,8 @@ - - + + Part of the globus pallidus, consisting of the more medial of the two segments. In some species, e.g., primates, it is separated from the lateral segment by the fibers of the medial medullary lamina (MM). BAMS:PALv BIRNLEX:1674 @@ -216950,11 +216887,11 @@ UBERON:0002778 ventral pallidum - + - + @@ -216967,14 +216904,14 @@ - + BTO NIF-def - + NIFSTD @@ -217027,7 +216964,7 @@ - + One of two recognized nuclei comprising the superior olive. The lateral superior olivary nucleus is much less prominent in humans than in many rodents and carnivores. In the latter species, it is frequently described as S- or V-shaped. BAMS:IOda @@ -217058,14 +216995,14 @@ lateral superior olivary nucleus http://upload.wikimedia.org/wikipedia/commons/9/9a/Gray679.png - + - + NIFSTD @@ -217188,7 +217125,7 @@ - + VPLC BAMS:VPLC BAMS:VPLp @@ -217211,14 +217148,14 @@ UBERON:0002781 caudal part of ventral posterolateral nucleus of thalamus - + - + NIFSTD @@ -217313,8 +217250,8 @@ - - + + One of two subnuclei of the superior olive located within the caudal pontine tegmentum. Appears as a parasagittal row of transversely oriented bipolar neurons in transverse sections of human, with elongated somata in humans and other primates and large caliber dendrites. BAMS:MSO BIRNLEX:1682 @@ -217347,24 +217284,24 @@ medial superior olivary nucleus http://upload.wikimedia.org/wikipedia/commons/4/46/Gray713.png - + - + - + NIFSTD - + NIFSTD @@ -217466,7 +217403,7 @@ - + @@ -217483,7 +217420,7 @@ UBERON:0002783 central tegmental tract of pons - + @@ -217496,7 +217433,7 @@ - + FMA @@ -217604,7 +217541,7 @@ - + @@ -217631,20 +217568,14 @@ UBERON:0002786 root of abducens nerve - + - - FMA - - - - - + ZFA-abduced @@ -217726,7 +217657,7 @@ - + @@ -217754,14 +217685,14 @@ UBERON:0002787 decussation of trochlear nerve - + - + FMA @@ -218317,7 +218248,7 @@ - + Part of dorsal longitudinal fasciculus located within the pons. BAMS:dlfp BIRNLEX:1707 @@ -218329,7 +218260,7 @@ UBERON:0002793 dorsal longitudinal fasciculus of pons - + @@ -218342,7 +218273,7 @@ - + NIFSTD @@ -218553,7 +218484,7 @@ - + TODO - check ZFA BAMS:m5 BAMS:mV @@ -218586,14 +218517,14 @@ UBERON:0002796 motor root of trigeminal nerve - + - + Wikipedia @@ -218709,7 +218640,7 @@ - + The dorsal trigeminal tract (dorsal trigeminothalamic tract, or lemniscus) is a tract which receives signals from Meissner's corpuscles and Pacinian corpuscles. this tract arises from Principal trigeminal nucleus and terminates in the VPM nucleus of the thalamus. [WP,unvetted]. BAMS:d5 BAMS:tth @@ -218740,14 +218671,14 @@ This tract arises from Principal trigeminal nucleus and terminates in the ipsilateral VPM nucleus of the thalamus.[WP] dorsal trigeminal tract - + - + FMA NIFSTD @@ -218864,7 +218795,7 @@ - + @@ -218892,7 +218823,7 @@ UBERON:0002798 spinothalamic tract of pons - + @@ -218905,7 +218836,7 @@ - + FMA @@ -219074,7 +219005,7 @@ - + BAMS:sp5p BIRNLEX:1725 FMA:72507 @@ -219086,14 +219017,14 @@ UBERON:0002800 spinal trigeminal tract of pons - + - + NIFSTD @@ -219128,7 +219059,7 @@ - + The thalamus consists chiefly of gray substance, but its upper surface is covered by a layer of white substance, named the stratum zonale. BAMS:SZ BIRNLEX:1727 @@ -219143,14 +219074,14 @@ UBERON:0002801 stratum zonale of thalamus - + - + NIFSTD @@ -220140,7 +220071,7 @@ - + The cupula is a structure in the vestibular system, sensing proprioception. The cupula is located within the ampullae of each of the three semicircular canals. As fluid rushes by the cupula, hair cells within it sense rotational acceleration, and transmit the corresponding signal to the brain through the vestibulocochlear nerve (CN VIII) In their natural orientation within the head, the cupulae are located on the medial aspect of the semicircular canals. In this orientation, the kinocilia rest on the posterior aspect of the cupula. [WP,unvetted]. BIRNLEX:2523 BIRNLEX:2555 @@ -220161,14 +220092,14 @@ apex of cochlea - + - + Wikipedia @@ -220609,9 +220540,9 @@ - - - + + + The group of neuron cell bodies associated with the eighth cranial nerve during embryogenesis; splits in later development to form the cochlear and vestibular ganglia. Consider follow MA naming scheme. The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)[TAO] @@ -220653,15 +220584,15 @@ vestibulocochlear ganglion - + - + - + @@ -220674,19 +220605,19 @@ - + ZFA - + NCBIBook:NBK53175 - + EHDAA2 @@ -221073,7 +221004,7 @@ - + AVCo BAMS:AVCo @@ -221094,14 +221025,14 @@ UBERON:0002830 anteroventral cochlear nucleus - + - + NIFSTD @@ -221186,7 +221117,7 @@ - + PVCo BAMS:PVCo BIRNLEX:2573 @@ -221204,14 +221135,14 @@ UBERON:0002831 posteroventral cochlear nucleus - + - + NIFSTD @@ -221278,7 +221209,7 @@ - + @@ -221301,14 +221232,14 @@ UBERON:0002832 ventral nucleus of trapezoid body - + - + Wikipedia @@ -221369,7 +221300,7 @@ - + Nucleus in the pontine tegmentum of most mammals that receives projections from the ventral cochlear nucleus via the large specialized synapse, the Calyx of Held. It is not clear whether a well defined nucleus is present in humans, although humans may possess scattered cells with similar input. BIRNLEX:2595 @@ -221379,14 +221310,14 @@ UBERON:0002833 medial nucleus of trapezoid body - + - + Wikipedia @@ -223273,13 +223204,21 @@ - + + + + - + + + + + + CGM BAMS:CGM BIRNLEX:2638 @@ -223296,16 +223235,6 @@ UBERON:0002867 central gray substance of medulla - - - - - - - - - FMA - @@ -223568,7 +223497,7 @@ - + A cranial nerve nucleus for the vagus nerve in the medulla that lies under the floor of the fourth ventricle. It mostly serves parasympathetic vagal functions in the gastrointestinal tract, lungs, and other thoracic and abdominal vagal innervations. The cell bodies for the preganglionic parasympathetic vagal neurons that innervate the heart reside in the nucleus ambiguus.[WP,unvetted]. @@ -223625,14 +223554,14 @@ dorsal motor nucleus of vagus nerve http://upload.wikimedia.org/wikipedia/commons/8/82/Gray697.png - + - + definitional @@ -224053,7 +223982,7 @@ - + @@ -224092,14 +224021,14 @@ inferior salivatory nucleus http://upload.wikimedia.org/wikipedia/commons/a/a0/Gray843.png - + - + definitional @@ -225261,7 +225190,7 @@ - + BAMS:ABA BAMS:BAM BIRNLEX:2686 @@ -225286,14 +225215,14 @@ UBERON:0002885 accessory basal amygdaloid nucleus - + - + NIFSTD @@ -225397,7 +225326,7 @@ - + The sensory interface of the amygdala where plasticity is mediated (Phelps & LeDoux, 2005, http://www.ncbi.nlm.nih.gov/pubmed/ 16242399). @@ -225430,14 +225359,14 @@ lateral amygdaloid nucleus - + - + NIFSTD @@ -225521,7 +225450,7 @@ - + BAMS:ABL BAMS:BL @@ -225550,14 +225479,14 @@ UBERON:0002887 basal amygdaloid nucleus - + - + NIFSTD @@ -225907,7 +225836,7 @@ - + BAMS:AA BAMS:AAA @@ -225933,14 +225862,14 @@ anterior amygdaloid area - + - + NIFSTD @@ -226001,7 +225930,7 @@ - + Three layered structure that is located in the caudal aspect of the amygdala bordering the periamygdaloid cortex laterally. @@ -226033,14 +225962,14 @@ cortical amygdaloid nucleus - + - + NIFSTD @@ -226143,7 +226072,7 @@ - + BAMS:MEA BAMS:Me @@ -226170,14 +226099,14 @@ medial amygdaloid nucleus - + - + NIFSTD @@ -226383,8 +226312,8 @@ - - + + @@ -226421,24 +226350,24 @@ olfactory cortex - + - + - + VHOG - + MA @@ -226506,7 +226435,7 @@ - + Brodmann's area 28; major gateway for neocortical input to the hippocampus; origin of the perforant pathway; a component of the medial temporal lobe memory system. (CSP) * The cytoarchitecturally well-defined area of multilaminate cerebral cortex on the medial aspect of the parahippocampal gyrus, immediately caudal to the olfactory cortex of the uncus. The entorhinal cortex is the origin of the major neural fiber system afferent to the hippocampus, the so-called PERFORANT PATHWAY. (Stedman, 25th ed). FMA considers this a syn of entorhinal cortex. See also brodman definition BAMS:Ent @@ -226523,14 +226452,14 @@ secondary olfactory cortex - + - + NIF @@ -227039,12 +226968,20 @@ - + + + + - + + + + + + The anterior end of the hemisphere is named the frontal pole. The posterior end is named the occipital pole. The anterior end of the temporal lobe, the temporal pole. [WP,unvetted]. OCP @@ -227070,16 +227007,6 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - - - - - - - - - BTO - @@ -227275,7 +227202,7 @@ - + A groove located within the boundaries of the lingual gyrus in the human. Identified by dissection, it is oriented parallel to the inferior margin of the occipital lobe ( Ono-1990; Duvernoy-1992 ). It is not found in the macaque or in the smooth cerebral cortex of the rat or mouse ( NeuroNames ) ILS @@ -227289,7 +227216,7 @@ UBERON:0002905 intralingual sulcus - + @@ -227302,7 +227229,7 @@ - + cjm @@ -227592,7 +227519,7 @@ - + One of two branches of the lateral fissure at its posterior terminus identified by dissection in the human. The other is the terminal descending limb of the lateral fissure ( Ono-1990 ). It is not found in the macaque ( Martin-2000 ), the rat ( Swanson-2004 ) or the mouse ( Hof-2000 ). PALS BAMS:pals @@ -227611,7 +227538,7 @@ UBERON:0002910 posterior ascending limb of lateral sulcus - + @@ -227624,7 +227551,7 @@ - + NIFSTD @@ -227779,7 +227706,7 @@ - + The marginal sulcus is the portion of the cingulate sulcus adjacent to the paracentral lobule and the precuneus. It is sometimes known as the 'marginal part of the cingulate sulcus'. [WP,unvetted]. MS BIRNLEX:4030 @@ -227800,7 +227727,7 @@ marginal sulcus http://upload.wikimedia.org/wikipedia/commons/d/d0/Gray727_marginal_sulcus.svg - + @@ -227813,7 +227740,7 @@ - + FMA @@ -228169,7 +228096,7 @@ - + @@ -228211,14 +228138,14 @@ http://upload.wikimedia.org/wikipedia/commons/8/8e/Gray726_central_sulcus.svg https://upload.wikimedia.org/wikipedia/commons/b/b6/Central_sulcus.png - + - + NIFSTD @@ -228333,7 +228260,7 @@ - + The Medial parabrachial nucleus is a nucleus of the pons which constitutes part of the pneumotaxic center. It gets its name from its location relative to the superior cerebellar peduncles, which is also known as the 'brachia conjunctiva'. [WP,unvetted]. BAMS:MPB @@ -228353,14 +228280,14 @@ medial parabrachial nucleus - + - + FMA @@ -228705,7 +228632,7 @@ - + A small triangular area in front of the anterior perforated substance. Its apex, directed forward, occupies the posterior part of the olfactory sulcus, and is brought into view by throwing back the olfactory tract (adapted from Wikipedia). OLT BAMS:OTr @@ -228724,14 +228651,14 @@ olfactory trigone http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray732.png - + - + BTO-def @@ -228834,8 +228761,8 @@ - - + + The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest. The terminal nerve, located anterior to cranial nerve I, is comprised of a group of cells with somata adjacent to the olfactory bulb and processes that extend anteriorly to the olfactory epithelium and posteriorly to the telencephalon. In teleost fish an additional group of axons extends along the optic tract and delivers putative neuromodulators to the retina. It is thought to develop from cranial neural crest. Whitlock 2004. Also see Grens, Greenwood and Fernald, Brain Behav Evol 2005; 66(1):1-9.[TAO] TRN @@ -228861,11 +228788,11 @@ http://www.ncbi.nlm.nih.gov/pubmed/2286018 state: 'The presence of an additional cranial nerve (the nervus terminalis or cranial nerve zero) is well documented in many non-human vertebrate species. However, its existence in the adult human has been disputed. The present study focused on the structure and incidence of this nerve in the adult human brain. The nerve was examined post-mortem in 10 adult brains using dissection microscopy, light microscopy, transmission electron microscopy, and immunohistochemistry. In all specimens, the nervus terminalis was identified bilaterally as a microscopic plexus of unmyelinated peripheral nerve fascicles in the subarachnoid space covering the gyrus rectus of the orbital surface of the frontal lobes. The plexus appeared in the region of the cribriform plate of the ethmoid and coursed posteriorly to the vicinity of the olfactory trigone, medial olfactory gyrus, and lamina terminalis. We conclude that the terminal nerve is a common finding in the adult human brain, confirming early light microscopic reports.' terminal nerve - + - + @@ -228878,13 +228805,13 @@ - + ISBN:0471888893 - + ISBN:0471888893 @@ -229096,7 +229023,7 @@ - + @@ -229109,14 +229036,14 @@ UBERON:0002926 gustatory epithelium - + - + NIFSTD @@ -229226,7 +229153,7 @@ - + BIRNLEX:701 DHBA:12364 FMA:72505 @@ -229240,7 +229167,7 @@ UBERON:0002930 tectopontine tract - + @@ -229253,7 +229180,7 @@ - + FMA @@ -229302,7 +229229,7 @@ - + BAMS:DS BIRNLEX:704 FMA:61877 @@ -229313,14 +229240,14 @@ UBERON:0002931 dorsal septal nucleus - + - + NIFSTD @@ -229548,7 +229475,7 @@ - + V3 BIRNLEX:713 DHBA:12205 @@ -229563,14 +229490,14 @@ UBERON:0002934 ventral oculomotor nucleus - + - + NIFSTD @@ -229626,7 +229553,7 @@ - + VAMC BAMS:VAMC BIRNLEX:716 @@ -229653,14 +229580,14 @@ UBERON:0002935 magnocellular part of ventral anterior nucleus - + - + FMA @@ -229901,7 +229828,7 @@ - + VAPC BAMS:VAPC BIRNLEX:722 @@ -229919,14 +229846,14 @@ UBERON:0002937 parvocellular part of ventral anterior nucleus - + - + FMA @@ -230123,7 +230050,7 @@ - + BAMS:VP BAMS:VPI BIRNLEX:728 @@ -230156,14 +230083,14 @@ UBERON:0002939 ventral posteroinferior nucleus - + - + FMA @@ -230278,7 +230205,7 @@ - + BAMS:afx @@ -230294,14 +230221,14 @@ UBERON:0002940 anterior column of fornix - + - + NIFSTD @@ -230431,7 +230358,7 @@ - + The ventral posterolateral nucleus (VPL) is a nucleus of the thalamus. Together with the ventral posteromedial nucleus (VPM) it constitutes the ventral posterior nucleus. [WP,unvetted]. @@ -230473,14 +230400,14 @@ ventral posterolateral nucleus http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + FMA NIF @@ -230717,14 +230644,14 @@ - + - + Part of spinothalamic tract that is in the medulla. spinothalamic tract BAMS:stm @@ -230742,11 +230669,11 @@ spinothalamic tract of medulla http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg - + - + @@ -230759,13 +230686,13 @@ - + FMA - + GO @@ -230813,7 +230740,7 @@ - + The ventral posteromedial nucleus is a nucleus of the thalamus. [WP,unvetted]. @@ -230866,14 +230793,14 @@ ventral posteromedial nucleus of thalamus http://upload.wikimedia.org/wikipedia/commons/1/1b/ThalamicNuclei.png - + - + FMA @@ -231214,8 +231141,8 @@ - - + + A long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the superior colliculus of the midbrain towards target cells in the ventral spinal cord[GO]. NIF and FMA differ in placement (spinal cord vs medulla) BAMS:ts @@ -231241,11 +231168,11 @@ tectospinal tract http://upload.wikimedia.org/wikipedia/commons/b/be/Gray670.png - + - + @@ -231258,14 +231185,14 @@ - + weakened FMA - + weakened NIFSTD @@ -231563,7 +231490,7 @@ - + A relatively small region of the hypothalamus located inferior to the hypothalamic sulcus. Brain structure which is the dorsal most region of the hypothalamus and expands laterally and emerges caudal to the ventral zone and is separated from the median tuberal portion by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain[ZFA:0000347, ISBN:3764351209, ZFA:curator]. In humans it contains the following nuclei: portions of the dorsomedial nucleus [TA] (nucleus dorsomedialis [TA]), endopeduncular nucleus [TA]) (nucleus endopeduncularis [TA]), and portions of the nucleus of the ansa lenticularis (nucleus ansae lenticularis @@ -231586,14 +231513,14 @@ ). dorsal hypothalamic area - + - + NIFSTD @@ -231668,7 +231595,7 @@ - + @@ -231695,14 +231622,14 @@ UBERON:0002955 rhomboidal nucleus - + - + NIFSTD @@ -231930,7 +231857,7 @@ - + CC3 BAMS:CC3 BIRNLEX:780 @@ -231947,14 +231874,14 @@ UBERON:0002957 caudal central oculomotor nucleus - + - + NIFSTD @@ -232004,8 +231931,8 @@ - - + + Part of medial lemniscus located within the pons. BAMS:mlp BIRNLEX:781 @@ -232022,11 +231949,11 @@ UBERON:0002958 medial lemniscus of pons - + - + @@ -232039,14 +231966,14 @@ - + FMA NIFSTD - + FMA @@ -232111,7 +232038,7 @@ - + SF BAMS:SF BIRNLEX:783 @@ -232122,14 +232049,14 @@ UBERON:0002959 subfascicular nucleus - + - + NIFSTD @@ -232168,7 +232095,7 @@ - + C3 BIRNLEX:786 DHBA:12201 @@ -232184,14 +232111,14 @@ UBERON:0002960 central oculomotor nucleus - + - + NIFSTD @@ -232240,8 +232167,8 @@ - - + + A portion of the cerebral cortex that, with the paleocortex, develops in association with the olfactory system, and which is phylogenetically older than the neocortex and lacks its layered structure. The embryonic archicortex corresponds to the cortex of the dentate gyrus and hippocampus in mature mammals. Being part of the limbic system, it has functions related to emotions and formation of memory. Signals being sent from the limbic lobe to the hippocampal formations can go via the archicortex as an intermediate. BAMS:ACx BIRNLEX:787 @@ -232259,11 +232186,11 @@ archicortex - + - + @@ -232276,13 +232203,13 @@ - + FMA - + Wikipedia @@ -232317,10 +232244,10 @@ - - - - + + + + A muscle in the manus that functions to adduct the thumb. It has two heads: transverse and oblique. It is a fleshy, flat, triangular, and fan-shaped muscle deep in the thenar compartment beneath the long flexor tendons and the lumbrical muscles at the center of the palm. It overlies the metacarpal bones and the interosseous muscles[WP]. EMAPA:36213 @@ -232335,46 +232262,46 @@ adductor pollicis muscle http://upload.wikimedia.org/wikipedia/commons/d/df/Musculusadductorpollicis.png - + - + - + - + - + medial side of the base of the proximal phalanx of the thumb and the ulnar sesamoid dbpedia - + medial side of the base of the proximal phalanx of the thumb and the ulnar sesamoid dbpedia - + dbpedia - + dbpedia @@ -232524,7 +232451,7 @@ - + D3 BAMS:D3 BIRNLEX:793 @@ -232539,14 +232466,14 @@ UBERON:0002964 dorsal oculomotor nucleus - + - + NIFSTD @@ -232595,7 +232522,7 @@ - + RIL BAMS:RIL @@ -232613,14 +232540,14 @@ UBERON:0002965 rostral intralaminar nuclear group - + - + FMA @@ -232842,7 +232769,7 @@ - + @@ -232867,14 +232794,14 @@ UBERON:0002968 central gray substance of pons - + - + FMA @@ -233060,7 +232987,7 @@ - + I3 BAMS:I3 BIRNLEX:803 @@ -233076,14 +233003,14 @@ UBERON:0002970 intermediate oculomotor nucleus - + - + NIFSTD @@ -233231,7 +233158,7 @@ - + In the anatomy of the brain, the centromedian nucleus, also known as the centrum medianum, (CM or Cm-Pf) is a part of the intralaminar nucleus (ILN) of the thalamus. There are two centromedian nuclei arranged bilaterally. It contains about 2000 neurons per cubic millimetre and has a volume of about 310 cubic millimetres with 664,000 neurons in total. [WP,unvetted]. CMn @@ -233270,14 +233197,14 @@ centromedian nucleus of thalamus - + - + FMA @@ -233416,11 +233343,11 @@ - - - - - + + + + + Component of the temporal lobe on the mesial surface, posterior to the entorhinal cortex. The rostral and caudal boundaries are the posterior end of the netorhinal cortex and the caudal portion of the hippocampus, respectively. The medial boudnary is designated as the medial aspect off the temporal lobe and the lateral boundary is the collateral sulcus (Christine Fennema-Notestine). BAMS:PHG @@ -233449,55 +233376,55 @@ parahippocampal gyrus http://upload.wikimedia.org/wikipedia/commons/b/b1/Human_brainstem_anterior_view_2_description.JPG - + - + - + - + - + - + FMA - + FMA - + FMA NIF - + Wikipedia - + Wikipedia @@ -233680,7 +233607,7 @@ - + M3 BAMS:M3 BIRNLEX:813 @@ -233695,14 +233622,14 @@ UBERON:0002975 medial oculomotor nucleus - + - + NIFSTD @@ -233795,7 +233722,7 @@ - + BAMS:STN BAMS:TRS @@ -233816,14 +233743,14 @@ UBERON:0002977 triangular septal nucleus - + - + NIFSTD @@ -234147,7 +234074,7 @@ - + Component of the inferior frontal gyrus.defined as the first gyrus from the precentral gyrus. inferior frontal gyrus, pars opercularis @@ -234173,14 +234100,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + FMA @@ -234262,7 +234189,7 @@ - + One of a set of nuclei located in the posterior thalamus, that projects to all or nearly all extra-striate visual areas. Pul @@ -234295,14 +234222,14 @@ pulvinar nucleus http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray719.png - + - + FMA @@ -234464,7 +234391,7 @@ - + The lateral posterior nucleus is a nucleus of the thalamus. It acts in concert with the pulvinar. @@ -234501,14 +234428,14 @@ lateral posterior nucleus of thalamus - + - + NIFSTD @@ -234629,7 +234556,7 @@ - + The lateral dorsal nucleus is a nucleus of the thalamus. It acts in concert with the anterior nuclei of thalamus. It receives significant input from several subdivisions of visual cortex, and has a primary output to parietal cortex on the dorsolateral cortical convexity, giving it access to limbic forebrain nuclei important for emotion and behavior functions. @@ -234669,14 +234596,14 @@ UBERON:0002984 lateral dorsal nucleus - + - + NIFSTD @@ -235040,14 +234967,14 @@ - + - + Runs through the ventrolateral surface of the spinal cord. It enters the cerebellum through the superior cerebellar peduncle. It crosses the midline at the segmental level and recrosses in the cerebellum. Its terminals are distributed in the cerebellar anterior lobe, preferentially in the ipsilateral intermediate cortex. Rostrally, it extends to lobule II. The ventral spinocerebellar tract conveys proprioceptive information from the body to the cerebellum. It is part of the somatosensory system and runs in parallel with the dorsal spinocerebellar tract. Both these tracts involve two neurons and end up on the same side of the body. The ventral tract (under L2/L3) gets its proprioceptive/fine touch/vibration information from a first order neuron, with its cell body in a dorsal ganglion. The axon runs via the fila radicularia to the dorsal horn of the grey matter. There it makes a synapse with the dendrites of two neurons: they send their axons bilaterally to the ventral border of the lateral funiculi. The ventral spinocerebellar tract then enters the cerebellum via the superior cerebellar peduncle. This is in contrast with the dorsal spinocerebellar tract (C8 - L2/L3), which only has 1 unilateral axon that has its cell body in the Clarke's nuclei (only at the level of C8 - L2/L3). The fibers of the ventral spinocerebellar tract then eventually enter the cerebellum via the superior cerebellar peduncle. This is one of the few afferent tracts through the superior cerebellar peduncle. Originates from ventral horn at lumbosacral spinal levels. Axons first cross midline in the spinal cord and run in the ventral border of the lateral funiculi. These axons ascend up to the pons where they join the superior cerebellar peduncle to enter the cerebellum. Once in the deep white matter of the cerebellum, the axons recross the midline, give off collaterals to the globose and emboliform nuclei, and terminate in the cortex of the anterior lobe and vermis of the posterior lobe. [WP,unvetted][Wikipedia:Ventral_spinocerebellar_tract]. BAMS:asc @@ -235074,24 +235001,24 @@ http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg http://upload.wikimedia.org/wikipedia/commons/f/fe/Medulla_spinalis_-_tracts_-_English.svg - + - + - + FMA - + Wikipedia @@ -235203,9 +235130,9 @@ - - - + + + A small muscle on the posterior aspect of the elbow joint. AAO:0010714 @@ -235224,15 +235151,15 @@ anconeus muscle http://upload.wikimedia.org/wikipedia/commons/7/77/Gray1232.png - + - + - + @@ -235245,20 +235172,20 @@ - + dbpedia - + lateral epicondyle of the humerus proximally dbpedia - + lateral surface of the olecranon process and the superior part of the posterior ulna distally dbpedia @@ -235389,7 +235316,7 @@ - + SUMX BAMS:smd BAMS:sumx @@ -235411,7 +235338,7 @@ UBERON:0002991 supramammillary commissure - + @@ -235424,7 +235351,7 @@ - + FMA @@ -235507,7 +235434,7 @@ - + One of the median nuclei of the thalamus, situated ventral and medial to the stria medullaris. PT @@ -235534,14 +235461,14 @@ UBERON:0002992 paratenial nucleus - + - + ABA FMA NIF @@ -235715,7 +235642,7 @@ - + @@ -235748,14 +235675,14 @@ UBERON:0002995 substantia nigra pars lateralis - + - + MA @@ -235889,7 +235816,7 @@ - + Predominantly gray matter structure consisting of large multipoloar cells lying aong axons of the brachium of the superior colliculus, lyaing adjaent to the dorsal terminal nucleus of the accessory optic system. In several species, cells of this nucleus receive input from the contralateral retina (Sefton and Dreher in Paxinos, G. The rat nervous system, 1995, pg. 862). @@ -235911,7 +235838,7 @@ UBERON:0002996 nucleus of optic tract - + @@ -235924,7 +235851,7 @@ - + ISBN:0471888893 @@ -236373,7 +236300,7 @@ - + The median raphe nucleus (or superior central nucleus) is composed of polygonal, fusiform and pyriform neurons and exists rostral to the nucleus raphe pontis. One trait of the MRN is its inhibition by lysergic acid diethylamide and psilocin, two serotonin antagonist hallucinogens. The inactivation of the nucleus centralis superior via LSD produces a dose dependent inactivation in the MRN, but not in the raphe pallidus[WP,unvetted]. TODO - The term medial raphe nucleus refers to a composite structure that consists of the superior central nucleus and the inferior central nucleus of the pontine reticular formation ( Carpenter-1983 ) @@ -236402,14 +236329,14 @@ median raphe nucleus - + - + Wikipedia @@ -236495,8 +236422,8 @@ - - + + Part of dorsal longitudinal fasciculus located in the midbrain tegmentum. DLFMB BAMS:dlfmb @@ -236516,11 +236443,11 @@ UBERON:0003005 dorsal longitudinal fasciculus of midbrain - + - + @@ -236533,13 +236460,13 @@ - + FMA - + NIFSTD @@ -236716,7 +236643,7 @@ - + The lateral parabrachial nucleus induces thirst by stimulating the median preoptic nucleus. It gets its name from its location relative to the superior cerebellar peduncles, which is also known as the 'brachia conjunctiva'. [WP,unvetted]. BAMS:LPB BIRNLEX:897 @@ -236734,14 +236661,14 @@ lateral parabrachial nucleus - + - + FMA @@ -236782,8 +236709,8 @@ - - + + Part of dorsal longitudinal fasciculus located within the hypothalamus. classified as tract in FMA DLFH @@ -236797,24 +236724,24 @@ UBERON:0003008 dorsal longitudinal fasciculus of hypothalamus - + - + - + FMA - + NIFSTD @@ -236869,7 +236796,7 @@ - + DTGX BAMS:dtd BAMS:dtgx @@ -236894,7 +236821,7 @@ UBERON:0003009 dorsal tegmental decussation - + @@ -236907,7 +236834,7 @@ - + FMA @@ -237011,7 +236938,7 @@ - + LPL BAMS:lpl BIRNLEX:902 @@ -237030,7 +236957,7 @@ UBERON:0003010 lateral pes lemniscus - + @@ -237043,7 +236970,7 @@ - + FMA @@ -237317,7 +237244,7 @@ - + @@ -237349,14 +237276,14 @@ flocculonodular lobe http://upload.wikimedia.org/wikipedia/commons/4/43/CerebellumDiv.png - + - + Wikipedia @@ -237647,7 +237574,7 @@ - + A predominantly gray matter structure of the basal telencephalon defined on the basis of Nissl stain. Caudal to the anterior commissure it lies deep to the globus pallidus and dorsal to the amygdala. Rostral to the anterior commissure it lies deep to the striatum. The more rostral portion contains the basal forebrain nucleus ( Anthoney-1994 ). In the late twentieth century the region containing the substantia innominata was resegmented on the basis of neurochemistry and connectivity to constitute the striatopallidal system ( Heimer-1995 ). In this scheme the caudal portion of substantia innominata is located largely in the ventral pallidum and the rostral portion in the ventral striatum. (from Brain Info). @@ -237678,14 +237605,14 @@ substantia innominata http://upload.wikimedia.org/wikipedia/commons/3/36/Substantia_innominata_MRI.PNG - + - + ABA @@ -237768,7 +237695,7 @@ - + VPMPC BAMS:Gus BAMS:VPMPC @@ -237801,14 +237728,14 @@ UBERON:0003018 parvocellular part of ventral posteromedial nucleus - + - + NIFSTD @@ -237949,7 +237876,7 @@ - + VPLO BAMS:VIM BAMS:VPLO @@ -237972,14 +237899,14 @@ UBERON:0003019 oral part of ventral posterolateral nucleus - + - + NIFSTD @@ -238177,7 +238104,7 @@ - + The central lobule is a small square lobule, situated in the anterior cerebellar notch. It overlaps the lingula, from which it is separated by the precentral fissure; laterally, it extends along the upper and anterior part of each hemisphere, where it forms a wing-like prolongation, the ala lobuli centralis. [WP,unvetted]. Note in FMA this is classified as a hemispheric lobule, which leads to inconsistencies. In ABA it is vermic, and FMA actually places it in the anterior vermis. @@ -238200,14 +238127,14 @@ central lobule http://upload.wikimedia.org/wikipedia/commons/e/e4/Gray703.png - + - + FMA @@ -238423,7 +238350,7 @@ - + VPMPr BAMS:VPMPr BIRNLEX:927 @@ -238437,14 +238364,14 @@ UBERON:0003024 principal part of ventral posteromedial nucleus - + - + NIFSTD @@ -238703,7 +238630,7 @@ - + The cingulate cortex is a part of the brain situated in the medial aspect of the cortex. It is extended from the corpus callosum below to the cingulate sulcus above, at least anteriorly. [WP,unvetted]. BIRNLEX:934 BM:Tel-Cx-Cg @@ -238725,14 +238652,14 @@ cingulate cortex http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray727_cingulate_gyrus.png - + - + NIFSTD cjm @@ -238936,7 +238863,7 @@ - + White matter structure in the brain consisting of fibers running along the lateral margin of the ventricular surface of the thalamus. The stria terminalis covers the thalamostriate vein, marking a line of separation between the thalamus and the caudate nucleus as seen upon gross dissection of the ventricles of the brain, viewed from the superior aspect. The stria terminalis extends from the region of the interventricular foramen to the temporal horn of the lateral ventricle, carrying fibers from the amygdala to the septal, hypothalamic, and thalamic areas of the brain. It also carries fibers projecting from these areas back to the amygdala. (Wikipedia:Stria_terminalis). BAMS:STR BAMS:st @@ -238965,14 +238892,14 @@ stria terminalis http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray683.png - + - + FMA @@ -239060,12 +238987,20 @@ - + + + + - + + + + + + PTh BAMS:PTh BIRNLEX:939 @@ -239087,17 +239022,6 @@ posterior nucleus of thalamus - - - - - - - - - FMA - NIFSTD - @@ -239360,7 +239284,7 @@ - + CD circular nucleus BAMS:CD @@ -239379,14 +239303,14 @@ UBERON:0003034 central dorsal nucleus of thalamus - + - + FMA NIFSTD @@ -239480,7 +239404,7 @@ - + @@ -239509,14 +239433,14 @@ UBERON:0003036 central lateral nucleus - + - + NIFSTD @@ -239934,7 +239858,7 @@ - + Periaqueductal gray (PAG; also called the 'central gray') is the gray matter located around the cerebral aqueduct within the midbrain. It plays a role in the descending modulation of pain and in defensive behaviour. The ascending pain and temperature fibers of the spinothalamic tract also send information to the PAG via the spinomesencephalic tract. The spinomesencephalic tract is so-named because the fibers originate in the spine and terminate in the mesencephalon, another name for the midbrain, the part of the brain in which the PAG resides. [WP,unvetted]. @@ -240002,14 +239926,14 @@ central gray substance of midbrain http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png - + - + NIFSTD @@ -240528,7 +240452,7 @@ - + @@ -240566,7 +240490,7 @@ uncinate fasciculus http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray751.png - + @@ -240579,7 +240503,7 @@ - + NIFSTD @@ -241029,7 +240953,7 @@ - + @@ -241063,7 +240987,7 @@ Olfactory placodes are the only ectodermal placodes to produce glia, a cell type typically derived from neural crest // Note that NBK53171 classifies this as non-neurogenic olfactory placode - + @@ -241077,7 +241001,7 @@ - + EHDAA2 @@ -241288,7 +241212,7 @@ - + @@ -241301,7 +241225,7 @@ - + The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. consider adding class for organizer. Consider adding separate class for isthmus as a structure Lampreys also have an MHB [midbrain hindbrain boundary], expressing a similar repertoire of regulatory gene cognates as in gnathostomes.[well established][VHOG] @@ -241330,31 +241254,24 @@ midbrain-hindbrain boundary - + - + - - ZFA - https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/106/ - - - - - + ZFA - + ZFA @@ -241399,8 +241316,8 @@ - - + + Proliferative region that is part of the ventricular system. Proliferative zone in the region of the neural tube adjacent to the lumen. There are two primary regions that are thought to give rise to neurons that make up the cerebellum. The first region is the ventricular zone (the roof of the fourth ventricle). This area produces Purkinje cells and deep cerebellar nuclear neurons[BTO:0003654]. @@ -241425,24 +241342,24 @@ ventricular zone - + - + - + MA - + ZFA @@ -241778,7 +241695,7 @@ - + The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta[GO]. A transient rod-like structure which is endodermally derived and located immediately ventral to the notochord. The hypochord is thought to play a role in positioning the dorsal aorta. Eriksson and Lofberg, 2000.[TAO] Unsegmented ventral structure in the caudal region of anuran larvae; near metamorphosis the hypochord fuses to the coccyx, thereby forming the urostyle.[AAO] @@ -241797,14 +241714,14 @@ Unlike in frogs and axolotl, the hypochord does not appear to be endodermally derived[ZFA]. near metamorphosis the hypochord fuses to the coccyx, thereby forming the urostyle[AAO] hypochord - + - + Bgee:AN @@ -241871,7 +241788,10 @@ - + + + + @@ -241888,7 +241808,12 @@ - + + + + + + Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO] It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG] @@ -241912,16 +241837,6 @@ presomitic mesoderm - - - - - - - - - Bgee:AN - @@ -241979,8 +241894,8 @@ - - + + In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]. Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO] The first-formed kidney duct, which drains the kidney of most anamniotes and becomes the ductus deferens of male amniotes. [Bemis_WE, Functional_Anatomy_of_the_Vertebrates:_An_Evolutionary_Perspective, Glossary_G-3, Grande_L, Liem_KF, Third_Edition_(2001)_Orlando_Fla.:_Harcourt_College_Publishers, Walker_WF][VHOG] @@ -242002,11 +241917,11 @@ The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney[GOC:mtg_kidney_jan10, PMID:15647339, XAO:0000063, ZFA:0000150] pronephric duct - + - + @@ -242019,13 +241934,13 @@ - + Wikipedia - + XAO @@ -242213,15 +242128,15 @@ - - + + - + Organizer for gastrulation in vertebrates. The primitive knot starts as a regional knot of cells that forms on the blastodisc immediately anterior to where the outer layer of cells will begin to migrate inwards - an area known as the primitive streak. Posterior to the node is the primitive pit, where the cells of the epiblast (the upper layer of embryonic cells) initially begin to invaginate. This invagination expands posteriorly into the primitive groove as the cells layers continue to move into the space between the embryonic cells and the yolk. This differentiates the embryo into the germ layers - endoderm, mesoderm, and ectoderm. The primitive knot migrates posteriorly as gastrulation proceeds, eventually being absorbed into the tail bud.[WP]. the regional thickening of cells at the rostral tip of the vertebrate primitive streak through which gastrulating cells migrate anteriorally to form tissues in the future head and neck; this region organizes the formation of the three embryonic layers and establishes the longitudinal axis and the polarity of the embryo[MP]. This class groups together possibly disparate structures, following homology class in vHOG; early development terms need review A signaling center that directs the development of the whole embryo or of part of the embryo.[AAO] @@ -242266,15 +242181,15 @@ primitive knot - + - + - + @@ -242287,19 +242202,19 @@ - + ZFA - + EHDAA - + Bgee:AN @@ -242446,8 +242361,8 @@ - - + + A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue. TODO - check; developmental relationship to anterior hypoblast in ZFA? Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region. Kimmel et al, 1995.[TAO] @@ -242471,24 +242386,24 @@ prechordal plate - + - + - + ZFA - + PMID:16313393 @@ -242545,9 +242460,9 @@ - - - + + + @@ -242588,34 +242503,34 @@ intermediate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + - + - + - + AAO - + EMAPA - + XAO @@ -243242,7 +243157,7 @@ - + @@ -243279,7 +243194,7 @@ eye primordium - + @@ -243292,7 +243207,7 @@ - + PMID:16496288 XAO @@ -243348,8 +243263,8 @@ - - + + @@ -243377,24 +243292,24 @@ optic cup - + - + - + ZFA - + ZFA @@ -243459,7 +243374,7 @@ - + @@ -243499,7 +243414,7 @@ lens placode http://upload.wikimedia.org/wikipedia/commons/2/2f/Gray864.png - + @@ -243512,7 +243427,7 @@ - + ZFA @@ -243582,7 +243497,7 @@ - + Paired organ that connects the primitive kidney Wolffian body (or mesonephros) to the cloaca and serves as the anlage for certain male reproductive organs. the Wolffian duct is what remains of the pronephric duct after the atrophy of the pronephros[WP]. In Zebrafish: Duct of the adult kidney (mesonephros), present bilaterally ventral to the somites and leading to the cloacal chamber[ZFA]. Consider adding subclasses for male and female specific variants TODO - mesonephric portion of the nephric duct @@ -243616,7 +243531,7 @@ mesonephric duct http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png - + @@ -243629,7 +243544,7 @@ - + EHDAA2 @@ -243718,8 +243633,8 @@ - - + + A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO] @@ -243751,24 +243666,24 @@ neural plate https://upload.wikimedia.org/wikipedia/commons/8/8f/Neural_Crest.png - + - + - + Wikipedia - + Bgee:AN @@ -243885,7 +243800,7 @@ - + The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. Mesoderm lateral to the neural tube and notochord that is divided into cranial and post-cranial portions. The trunk portions further segment into somites.[AAO] Presently, Cephalochordata, Urochordata, and Vertebrata are placed as subphyla of the phylum Chordata, in which the overall organization of embryonic tissues (dorsal hollow nerve cord, ventral digestive tract, axial notochord, and bilateral paraxial mesoderm) is largely conserved. In contrast, the echinoderms and hemichordates are sister groups of the chordates and they lack the notochord and paraxial mesoderm. Thus, the basic mesodermal organization of vertebrates must have appeared first in the common ancestor of the chordates.[well established][VHOG] @@ -243913,7 +243828,7 @@ paraxial mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -243926,7 +243841,7 @@ - + Bgee:AN @@ -243995,8 +243910,8 @@ - - + + @@ -244021,11 +243936,11 @@ epibranchial placode - + - + @@ -244039,13 +243954,13 @@ - + ZFA - + EHDAA2-abduced @@ -244113,7 +244028,7 @@ - + @@ -244156,14 +244071,14 @@ floor plate http://upload.wikimedia.org/wikipedia/commons/8/89/Gray642.png - + - + Wikipedia @@ -244258,7 +244173,7 @@ - + @@ -244301,7 +244216,7 @@ lateral plate mesoderm http://upload.wikimedia.org/wikipedia/commons/6/64/Gray19_with_color.png - + @@ -244314,7 +244229,7 @@ - + EHDAA2 VHOG @@ -244398,7 +244313,7 @@ - + @@ -244440,7 +244355,7 @@ myotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + @@ -244453,7 +244368,7 @@ - + EHDAA2-abduced @@ -244514,7 +244429,7 @@ - + Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]. Post-cranial portion of the neural crest. Exact anatomical derivations not experimentally resolved in amphibians.[AAO] We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] @@ -244533,14 +244448,14 @@ trunk neural crest - + - + ZFA @@ -244583,15 +244498,15 @@ - - + + - + Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. should probably be merged with heart rudiment. Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline between 21 and 26 somites to form the heart rudiment or cone. Stainier 2001.[TAO] @@ -244610,15 +244525,15 @@ heart primordium - + - + - + @@ -244631,19 +244546,19 @@ - + ZFA - + ZFA - + XAO @@ -244988,8 +244903,8 @@ - - + + Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. Skeletogenic portion of somites.[AAO] The vertebrate sclerotome has no equivalent in amphioxus and is a novelty linked with the evolution of the axial skeleton.[well established][VHOG] @@ -245016,11 +244931,11 @@ sclerotome http://upload.wikimedia.org/wikipedia/commons/9/96/Gray65.png - + - + @@ -245039,13 +244954,13 @@ - + VHOG:0000680 - + ZFA @@ -245115,7 +245030,7 @@ - + The lateral line that is located above the eye. One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)[TAO] The lateral line that is located above the eye. [Butler_AB_and_Hodos_W, Comparative_vertebrate_neuroanatomy:_Evolution_and_Adaptation_(1996)_New_York:_Wiley-Liss_Inc., p.27][VHOG] @@ -245131,14 +245046,14 @@ supraorbital lateral line - + - + TAO @@ -245198,9 +245113,9 @@ - - - + + + The initial thyroid precursor, the thyroid primordium, starts as a simple midline thickening and develops to form the thyroid diverticulum. This structure is initially hollow, although it later solidifies and becomes bilobed. The 2 lobes are located on either side of the midline and are connected via an isthmus. Portion of tissue part of the pharyngeal endoderm that is fated to become thyroid follicle[ZFIN:curator]. In all vertebrates the thyroid arises from the ventral aspect of the second pouch @@ -245220,15 +245135,15 @@ thyroid primordium - + - + - + @@ -245241,19 +245156,19 @@ - + ZFA - + VHOG - + ISBN:0073040584 PMID:16313389 @@ -245303,9 +245218,9 @@ - - - + + + An outpocketing of one of the caudal pharyngeal pouches that is comprised on calcitonin-producing parafollicular cells. TODO - ensure developmental relationships correct across species. WP says pouch 4, but this isn't supported by Kardong (table 13.1 or fig 15.5). MP says 'fifth pouch in human or as the ventral component of the fourth pouch in mouse'. EHDAA2 says 6th arch mesenchyme http://www.ncbi.nlm.nih.gov/pubmed/16313389 says: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, but mammals do not contain this structure Anatomical structure which includes small, calcitonin producing glands originating as epithelial growths from the sixth pharyngeal pouch.[AAO] @@ -245341,15 +245256,15 @@ ultimobranchial body - + - + - + @@ -245362,19 +245277,19 @@ - + Wikipedia - + Wikipedia - + ISBN:0073040584 @@ -245483,7 +245398,7 @@ - + One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)[TAO] The mechanosensory lateral line system is widely distributed in aquatic anamniotes. It was apparently present in the earliest vertebrates, as it has been identified in agnathans, cartilaginous fishes, bony fishes, lungfishes, the crossopterygian Latimeria, and aquatic amphibians.[well established][VHOG] AAO:0011075 @@ -245496,14 +245411,14 @@ occipital lateral line - + - + TAO @@ -245532,7 +245447,7 @@ - + The lateral line that is located below the eye. One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)[TAO] The lateral line that is located below the eye. [Butler_AB_and_Hodos_W, Comparative_vertebrate_neuroanatomy:_Evolution_and_Adaptation_(1996)_New_York:_Wiley-Liss_Inc., p.27][VHOG] @@ -245547,14 +245462,14 @@ infraorbital lateral line - + - + TAO @@ -245666,7 +245581,7 @@ - + One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)[TAO] relationship loss: develops_from middle lateral line primordium (TAO:0005118)[TAO] relationship loss: part_of middle lateral line system (TAO:0005114)[TAO] @@ -245680,14 +245595,14 @@ middle lateral line - + - + TAO @@ -246299,8 +246214,8 @@ - - + + Embryonic tissue derived from the mesodermal germ layer that contains the dorsal aorta, genital ridges and mesonephros. This region is the first autonomous embryonic site for definitive haematopoiesis. Region located near the pronephros and pronephric ducts that is a site of hematopoiesis in the embryo.[AAO] Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf.[TAO] @@ -246315,24 +246230,24 @@ dorsal lateral plate region - + - + - + XAO - + XAO @@ -246501,7 +246416,7 @@ - + @@ -246535,7 +246450,7 @@ Meckel's cartilage - + @@ -246548,7 +246463,7 @@ - + EHDAA2 @@ -246617,7 +246532,7 @@ - + (1) the arrangement of bones which supports the jaw from the braincase; (2) in teleost fish, a large, usually triangular, bone which supports the jaw. The teleost suspensorium is formed by fusion of various elements which vary among different taxa. requires review, possible split; TAO/ZFA structure is splanchoncranium (but includes some dermal bones as parts). Note AAO also includes 'palatoquadrate and suspensorium' as a class @@ -246631,14 +246546,14 @@ UBERON:0003108 suspensorium - + - + ZFA @@ -248265,7 +248180,7 @@ - + @@ -248312,14 +248227,14 @@ chorion membrane http://upload.wikimedia.org/wikipedia/commons/5/51/Gray24.png - + - + ISBN:0073040584 @@ -248510,7 +248425,7 @@ - + @@ -248561,14 +248476,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/trachea-female/v1.1/assets/3d-vh-f-trachea.glb https://cdn.humanatlas.io/digital-objects/ref-organ/trachea-male/v1.1/assets/3d-vh-m-trachea.glb - + - + EHDAA2 @@ -250376,7 +250291,7 @@ - + A follicle of the insect ovary. It is formed by germ cells (one oocyte and several nurse cells) encapsulated in follicle cells (Armstrong et al., 2020). FBbt:00004894 NCIT:C61362 @@ -250386,14 +250301,14 @@ UBERON:0003199 egg chamber - + - + https://github.com/obophenotype/uberon/issues/476 @@ -250961,7 +250876,7 @@ - + Anterior portion of the palate consisting of bone and mucous membranes [GO]. The hard palate is formed from bony processes of the maxilla, premaxilla and palatine bone [Kardong]. in FMA this is divided into bony parts and submucosa EMAPA:18952 @@ -250985,7 +250900,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb https://upload.wikimedia.org/wikipedia/commons/f/f6/Illu_mouth.jpg - + @@ -250998,7 +250913,7 @@ - + check this EMAPA @@ -251042,7 +250957,7 @@ - + The posterior pituitary (or neurohypophysis) comprises the posterior lobe of the pituitary gland and is part of the endocrine system. Despite its name, the posterior pituitary gland is not a gland, per se; rather, it is largely a collection of axonal projections from the hypothalamus that terminate behind the anterior pituitary gland. [WP,unvetted]. TODO - compare with UBERON:0002198 It (the hypophysis) develops embryonically in all vertebrates from two ectodermal evaginations that meet and unite. An infundibulum grows ventrally from the diencephalon of the brain, and Rathke's pouch extends dorsally from the roof of the developing mouth, or stomodaeum. The infundibulum remains connected to the floor of the diencephalon, which becomes the hypothalamus, and gives rise to the part of the gland known as the neurohypophysis. (...) Rathke's pouch loses its connection with the stomodaeum in most adult vertebrates and gives rise to the rest of the gland, the adenohypophysis. (...) A well-developed hypophyseal system with functional connections to the hypothalamus is unique to craniates.[well established][VHOG] @@ -251089,14 +251004,14 @@ neural lobe of neurohypophysis http://upload.wikimedia.org/wikipedia/commons/b/b9/Pituitary_gland_representation.PNG - + - + MP-def @@ -251348,7 +251263,7 @@ - + @@ -251375,14 +251290,14 @@ Genes: The positional specification of the metanephrogenic mesenchyme is negatively regulated by Foxc1 and Foxc2. Next the permanent kidney forming metanephrogenic mesenchyme is specified by Hox11 genes. The competence to respond to ureteric bud inducers is regulated by WT1. GDNF secretion restricted to posterior region by Robo2 and Sprouty1. The receptors for GDNF are synthesized in the nephric ducts and later in ureteric buds [ISBN:9780878932504 "Developmental Biology"] metanephric mesenchyme - + - + ISBN:9780878932504 @@ -251540,10 +251455,10 @@ - - - - + + + + An extrinsic flexor muscle of the fingers at the proximal interphalangeal joints.[WP]. EMAPA:36202 @@ -251556,19 +251471,19 @@ flexor digitorum superficialis http://upload.wikimedia.org/wikipedia/commons/5/53/Gray421.png - + - + - + - + @@ -251581,27 +251496,27 @@ - + dbpedia - + medial epicondyle of the humerus as well as parts of the radius and ulna. dbpedia - + anterior margins on the bases of the middle phalanges of the four fingers dbpedia - + dbpedia @@ -251643,14 +251558,30 @@ - - + + + + + + + + - - + + + + + + + + + + + + An extraembryonic structure that develops_from a syncytiotrophoblast and is part of a chorion. TODO - check EHDAA2:0001973 @@ -251658,27 +251589,6 @@ UBERON:0003224 chorion syncytiotrophoblast - - - - - - - - - - - - - EHDAA2 - - - - - - polar trophectoderm syncytiotrophoblast - EHDAA2 - @@ -251722,11 +251632,11 @@ - - - - - + + + + + A muscle which originates on the distal humerus, inserts on the radius and accomplishes supination (rotation of the wrist). TODO - The term 'supinator' can also refer more generally to a muscle that causes supination of a part of the body. In older texts, the term 'supinator longus' was used to refer to the brachioradialis, and 'supinator brevis' was used to the muscle now known as the supinator. @@ -251743,23 +251653,23 @@ supinator muscle http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray420.png - + - + - + - + - + @@ -251772,34 +251682,34 @@ - + deep branch of radial nerve dbpedia - + Lateral epicondyle of humerus supinator crest of ulna radial collateral ligament annular ligament dbpedia - + Lateral epicondyle of humerus supinator crest of ulna radial collateral ligament annular ligament dbpedia - + palaeos - + dbpedia @@ -251846,7 +251756,7 @@ - + An epithelium that is part of a elbow [Automatically generated definition]. EHDAA2:0000430 EHDAA:4168 @@ -251863,14 +251773,14 @@ UBERON:0003229 epithelium of elbow - + - + EHDAA2 @@ -251945,7 +251855,7 @@ - + An epithelium that is part of a wrist [Automatically generated definition]. EHDAA2:0000219 EHDAA:5198 @@ -251959,7 +251869,7 @@ UBERON:0003230 epithelium of carpal region - + @@ -251972,7 +251882,7 @@ - + EHDAA2 @@ -252047,7 +251957,7 @@ - + An epithelium that is part of a hip [Automatically generated definition]. EHDAA2:0000784 EHDAA:5155 @@ -252068,14 +251978,14 @@ UBERON:0003231 epithelium of hip - + - + EHDAA2 @@ -252174,7 +252084,7 @@ - + An epithelium that is part of a knee [Automatically generated definition]. EHDAA2:0000896 EHDAA:5161 @@ -252187,14 +252097,14 @@ UBERON:0003232 epithelium of knee - + - + EHDAA2 @@ -252245,7 +252155,7 @@ - + An epithelium that is part of a shoulder [Automatically generated definition]. EHDAA2:0001835 EHDAA:4182 @@ -252258,14 +252168,14 @@ UBERON:0003233 epithelium of shoulder - + - + EHDAA2 @@ -252299,11 +252209,11 @@ - - - - - + + + + + The Extensor pollicis longus is much larger than the Extensor pollicis brevis muscle, the origin of which it partly covers. EMAPA:36196 @@ -252318,23 +252228,23 @@ extensor pollicis longus muscle http://upload.wikimedia.org/wikipedia/commons/3/3e/Extensor_pollicis_longus_muscle.png - + - + - + - + - + @@ -252347,31 +252257,31 @@ - + dbpedia - + dbpedia - + dbpedia - + dbpedia - + dbpedia @@ -252812,10 +252722,10 @@ - - - - + + + + An epithelium that is part of a utricle of membranous labyrinth [Automatically generated definition]. TODO - check relationships w.r.t macula EHDAA:4730 @@ -252843,19 +252753,19 @@ UBERON:0003241 epithelium of utricle - + - + - + - + @@ -252868,25 +252778,25 @@ - + FMA - + FMA - + FMA - + FMA @@ -253015,9 +252925,9 @@ - - - + + + An epithelium that is part of a saccule of membranous labyrinth [Automatically generated definition]. TODO - check relationships w.r.t macula EHDAA:4724 @@ -253045,34 +252955,34 @@ UBERON:0003242 epithelium of saccule - + - + - + - + FMA - + FMA - + FMA @@ -253316,7 +253226,7 @@ - + @@ -253343,14 +253253,14 @@ epithelium of mammary gland - + - + EHDAA2 Wikipathways:WP2062 @@ -253500,7 +253410,7 @@ - + An epithelium that is part of a lower arm [Automatically generated definition]. EHDAA2:0000554 EHDAA:4174 @@ -253511,14 +253421,14 @@ UBERON:0003247 epithelium of forearm - + - + EHDAA2 @@ -253552,7 +253462,7 @@ - + An epithelium that is part of a footplate. EHDAA2:0000548 EHDAA:5145 @@ -253563,7 +253473,7 @@ UBERON:0003248 epithelium of footplate - + @@ -253576,7 +253486,7 @@ - + EHDAA2 @@ -253680,7 +253590,7 @@ - + A muscle that arises from the upper surface of the transverse process of the atlas and inserts into the under surface of the jugular process of the occipital bone. Lateral flexion @@ -253698,7 +253608,7 @@ rectus capitis lateralis muscle http://upload.wikimedia.org/wikipedia/commons/b/b7/Rectus_capitis_lateralis_muscle.PNG - + @@ -253711,7 +253621,7 @@ - + jugular process Wikipedia @@ -253892,7 +253802,7 @@ - + The neck of the rib is the flattened portion which extends lateralward from the head; it is about 2.5 cm. long, and is placed in front of the transverse process of the lower of the two vertebrC& with which the head articulates. Its anterior surface is flat and smooth, its posterior rough for the attachment of the ligament of the neck, and perforated by numerous foramina. Of its two borders the superior presents a rough crest (crista colli costE) for the attachment of the anterior costotransverse ligament; its inferior border is rounded. On the posterior surface at the junction of the neck and body, and nearer the lower than the upper border, is an eminencebthe tubercle; it consists of an articular and a non-articular portion. The articular portion, the lower and more medial of the two, presents a small, oval surface for articulation with the end of the transverse process of the lower of the two vertebrC& to which the head is connected. The non-articular portion is a rough elevation, and affords attachment to the ligament of the tubercle. The tubercle is much more prominent in the upper than in the lower ribs. EMAPA:37826 FMA:7576 @@ -253905,14 +253815,14 @@ neck of rib http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray122.png - + - + PMID:15906248 @@ -253956,8 +253866,8 @@ - - + + we make the germ layer relationship develops_from, as currently the germ layers are declared to be purely embryonic. TODO - check. WP:Amnion - In the human embryo the earliest stages of the formation of the amnion have not been observed; in the youngest embryo which has been studied the amnion was already present as a closed sac, and appears in the inner cell-mass as a cavity. This cavity is roofed in by a single stratum of flattened, ectodermal cells, the amniotic ectoderm, and its floor consists of the prismatic ectoderm of the embryonic disk-the continuity between the roof and floor being established at the margin of the embryonic disk. Outside the amniotic ectoderm is a thin layer of mesoderm, which is continuous with that of the somatopleure and is connected by the body-stalk with the mesodermal lining of the chorion. UBERON:0008359 @@ -253973,11 +253883,11 @@ amniotic ectoderm - + - + @@ -253996,13 +253906,13 @@ - + EHDAA2 - + EHDAA2-via-amnioblasts ISBN:9780878932504 @@ -254301,7 +254211,7 @@ - + An endoderm that is part of a thyroid primordium. UBERON:0005235 EHDAA:956 @@ -254312,14 +254222,14 @@ UBERON:0003261 thyroid primordium endoderm - + - + ZFA-propagated @@ -254479,7 +254389,7 @@ - + A mesenchyme that is part of a chorion. TODO - check UBERON:0003423 @@ -254497,7 +254407,7 @@ UBERON:0003265 chorionic mesenchyme - + @@ -254516,7 +254426,7 @@ - + ISBN:0073040584 @@ -255153,7 +255063,7 @@ - + @@ -255183,14 +255093,14 @@ skeleton of lower jaw - + - + VHOG-modified @@ -255399,12 +255309,20 @@ - + + + + - + + + + + + @@ -255430,22 +255348,12 @@ mesentery of stomach - - - - MA - - - - - MA - @@ -256138,7 +256046,7 @@ - + A meninx that is part of a hindbrain [Automatically generated definition]. consider changing genus to subdivision of meninx Meninges that are part of the hindbrain. [Bgee_curator][VHOG] @@ -256155,14 +256063,14 @@ UBERON:0003291 meninx of hindbrain - + - + definitional @@ -256388,13 +256296,21 @@ - + + + + - + + + + + + Racemose mucous glands beneath the mucous membrane of the pharynx. BTO:0004849 EHDAA2:0001461 @@ -256406,16 +256322,6 @@ pharyngeal gland - - - - - - - - - BTO - @@ -257287,7 +257193,7 @@ - + A blood island that is part of a mesoderm. in EHDAA2, gives rise to blood and dorsal aorta UBERON:0003305 @@ -257298,7 +257204,7 @@ UBERON:0003304 mesoderm blood island - + @@ -257311,7 +257217,7 @@ - + EHDAA2 @@ -258234,7 +258140,7 @@ - + Mesenchyme that is part of a developing camera-type eye. TODO - change mesenchyme relationships to precursor_of EHDAA2:0000485 @@ -258245,14 +258151,14 @@ UBERON:0003314 eye mesenchyme - + - + EHDAA2 @@ -258803,7 +258709,7 @@ - + Mesenchyme that is part of a developing upper jaw [Automatically generated definition]. EHDAA2:0002124 EHDAA:8031 @@ -258815,14 +258721,14 @@ UBERON:0003323 mesenchyme of upper jaw - + - + EHDAA2 @@ -258873,7 +258779,7 @@ - + Mesenchyme that is part of a developing lower jaw [Automatically generated definition]. EHDAA2:0001024 EHDAA:8003 @@ -258885,14 +258791,14 @@ UBERON:0003324 mesenchyme of lower jaw - + - + EHDAA2 @@ -259206,7 +259112,7 @@ - + Mesenchyme that is part of a footplate. We group two EMAPA classes here but these may need to be separated UBERON:0005260 @@ -259220,14 +259126,14 @@ UBERON:0003328 mesenchyme of footplate - + - + EHDAA2 @@ -260789,15 +260695,23 @@ - + + + + - - + + + + + + + An epithelium that is part of a pharynx [Automatically generated definition]. Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007.[TAO] BSA:0000112 @@ -260816,24 +260730,14 @@ pharyngeal epithelium - - - - - + - - ZFA - - - - - + ZFA @@ -260885,12 +260789,20 @@ - + + + + - + + + + + + An epithelium that is part of a midgut. BTO:0005053 EHDAA2:0001195 @@ -260902,16 +260814,6 @@ UBERON:0003352 epithelium of midgut - - - - - - - - - BTO - @@ -261964,7 +261866,7 @@ - + An epithelium that is part of a vomeronasal organ [Automatically generated definition]. TODO - add cell types EHDAA2:0004102 @@ -261983,7 +261885,7 @@ UBERON:0003367 epithelium of vomeronasal organ - + @@ -261996,7 +261898,7 @@ - + EHDAA2 @@ -262128,7 +262030,7 @@ - + Found in the right atrium of the heart, the fossa ovalis is an embryonic remnant of the foramen ovale, which normally closes shortly after birth. In a heart specimen of a neonate, the fossa ovalis is translucent, but later in life the membrane thickens. FMA:9246 SCTID:277719009 @@ -262138,14 +262040,14 @@ UBERON:0003369 fossa ovalis of heart - + - + Wikipedia @@ -262185,14 +262087,14 @@ - + - + An unilaminar epithelium that surrounds a pelvic appendage bud. UBERON:0005232 EHDAA2:0001034 @@ -262207,24 +262109,24 @@ UBERON:0003371 pelvic appendage bud ectoderm - + - + - + EHDAA2 - + EHDAA2 @@ -262291,14 +262193,14 @@ - + - + An unilaminar epithelium that surrounds a pectoral appendage bud. UBERON:0005231 UBERON:0005663 @@ -262314,24 +262216,24 @@ UBERON:0003372 pectoral appendage bud ectoderm - + - + - + EHDAA2 - + EHDAA2 @@ -262430,7 +262332,10 @@ - + + + + @@ -262441,7 +262346,12 @@ - + + + + + + An extraembryonic structure that develops_from a ectoderm and is part of a chorion. BTO:0005145 EMAPA:16113 @@ -262451,16 +262361,6 @@ UBERON:0003374 chorionic ectoderm - - - - - - - - - ISBN:0073040584 - @@ -263868,7 +263768,7 @@ - + A lobar bronchus that is part of a right lung [Automatically generated definition]. EMAPA:17664 MA:0003134 @@ -263882,14 +263782,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -263941,7 +263841,7 @@ - + A lobar bronchus that is part of a left lung [Automatically generated definition]. EMAPA:17388 EMAPA:17656 @@ -263956,14 +263856,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -264997,14 +264897,22 @@ - + + + + - - + + + + + + + Mesenchyme that is part of a developing vomeronasal organ [Automatically generated definition]. EHDAA2:0004103 EMAPA:18445 @@ -265015,24 +264923,14 @@ UBERON:0003421 mesenchyme of vomeronasal organ - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -265090,7 +264988,7 @@ - + A gelatinous substance within the umbilical cord, largely made up of mucopolysaccharides (hyaluronic acid and chondroitin sulfate). It also contains some fibroblasts and macrophages. It is derived from Extra Embryonic Mesoderm[WP]. TODO - check @@ -265104,14 +265002,14 @@ mesenchyme of umbilical cord - + - + Wikipedia @@ -267623,7 +267521,7 @@ - + Nodular lymphoid structures on the serosal surface of the small intestine. add subtypes for jejunum, ileum @@ -267641,14 +267539,14 @@ UBERON:0003454 small intestine Peyer's patch - + - + ncithesaurus @@ -268317,12 +268215,20 @@ - + + + + - + + + + + + A bone that is part of a facial skeleton [Automatically generated definition]. test whether 'facial bone' is an exact synonym EMAPA:19019 @@ -268342,16 +268248,6 @@ facial bone - - - - - - - - - MA - @@ -268818,8 +268714,8 @@ - - + + @@ -268838,24 +268734,24 @@ ureteric segment of renal artery - + - + - + FMA - + FMA @@ -268932,7 +268828,7 @@ - + @@ -268954,14 +268850,14 @@ artery of upper lip - + - + FMA @@ -269021,7 +268917,7 @@ - + @@ -269044,14 +268940,14 @@ artery of lower lip - + - + FMA @@ -270173,7 +270069,7 @@ - + An endothelium of capillary that is part of a respiratory system [Automatically generated definition]. EMAPA:37575 MA:0001808 @@ -270203,14 +270099,14 @@ UBERON:0003489 respiratory system capillary endothelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -270501,7 +270397,7 @@ - + A reticular lamina that is part of a bronchus [Automatically generated definition]. EMAPA:37811 MA:0001834 @@ -270525,14 +270421,14 @@ UBERON:0003492 bronchus reticular lamina - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -270668,7 +270564,7 @@ - + A reticular lamina that is part of a trachea [Automatically generated definition]. EMAPA:37554 MA:0001856 @@ -270684,14 +270580,14 @@ UBERON:0003493 trachea reticular lamina - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -270838,21 +270734,21 @@ - + An arteriole that is part of a respiratory system [Automatically generated definition]. EMAPA:37568 MA:0001803 UBERON:0003495 respiratory system arteriole - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -270886,7 +270782,7 @@ - + A blood vessel that is part of a head [Automatically generated definition]. EMAPA:36610 MA:0000575 @@ -270897,14 +270793,14 @@ UBERON:0003496 head blood vessel - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -274348,36 +274244,34 @@ - + + + + - - + + + + + + + A macula densa that is part of a distal convoluted tubule [Automatically generated definition]. MA:0001668 UBERON:0003546 distal convoluted tubule macula densa - - - - - + - - MA - - - - - + MA @@ -286086,7 +285980,7 @@ - + A bone that is part of a mesopodial skeleton. The carpus (wrist) and tarsus (ankle) of land vertebrates primitively had three rows of carpal or tarsal bones. Often some of these have become lost or fused in evolution. Three proximals. In the hand humans has all three. In the foot the middle proximal appears in 5-15% of people as an os trigonum. Centrale or os centrale, on the medial side. In humans and our closest relatives the African apes (chimpanzees and gorillas) it fuses to the scaphoid where it forms the articulation with the trapezoid bone; occasionally it stays separate. In Man's foot it is the navicular. Some early land vertebrates had more than one (up to three) os centrale per hand or foot. Distals, one per finger / toe at the base of each metacarpal or metatarsal. In mammals the 4th and 5th fuse. In the horse the 1st is lost EMAPA:36579 @@ -286099,7 +285993,7 @@ UBERON:0003656 mesopodium bone - + @@ -286112,7 +286006,7 @@ - + https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern @@ -286219,7 +286113,7 @@ - + Any muscle organ that is part of a hip [Automatically generated definition]. MA:0000657 hip muscle organ @@ -286231,14 +286125,14 @@ UBERON:0003658 hip muscle - + - + prolog @@ -286528,7 +286422,7 @@ - + @@ -286546,14 +286440,14 @@ limb muscle - + - + prolog @@ -286599,7 +286493,7 @@ - + Any muscle organ that is part of a forelimb. FMA and MA class actually refer to muscles of entire pectoral complex UBERON:0005634 @@ -286620,14 +286514,14 @@ UBERON:0003662 forelimb muscle - + - + prolog @@ -286724,7 +286618,7 @@ - + Any muscle organ that is part of a hindlimb [Automatically generated definition]. AAO:0000222 @@ -286747,14 +286641,14 @@ hindlimb muscle - + - + prolog @@ -287337,7 +287231,7 @@ - + A combination of exfoliated (shed) epithelial cells, transudated skin oils, and moisture. It occurs in both female and male mammalian genitalia[WP]. FMA:19656 GAID:1170 @@ -287348,14 +287242,14 @@ UBERON:0003670 smegma - + - + Wikipedia @@ -287583,14 +287477,14 @@ - + - + A tooth that is typically long and pointed and bearing a single cusp. @@ -287623,25 +287517,25 @@ cuspid https://upload.wikimedia.org/wikipedia/commons/5/57/Azawakh_K9.jpg - + - + - + 1 EDITOR_NOTE cardinality not allowed with transitivity in OWL - + Wikipedia @@ -288094,7 +287988,7 @@ - + In humans: Muscles arising in the zygomatic arch that close the jaw. Their nerve supply is masseteric from the mandibular division of the trigeminal nerve. (From Stedman, 25th ed). we use this specifically for a jaw muscle that is innervates by the mandibular nerve. @@ -288116,14 +288010,14 @@ masticatory muscle http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray781.png - + - + dbpedia @@ -288502,7 +288396,7 @@ - + Dental alveolus (plural, alveoli) are sockets in the jaws in which the roots of teeth are held in the alveolar process of maxilla with the periodontal ligament. The lay term for dental alveoli is tooth sockets. A joint that connect the roots of the teeth and the alveolus are called gomphosis (plural gomphoses). In mammals, tooth sockets are found in the maxilla and the mandible. [WP,unvetted]. FMA:57490 GAID:217 @@ -288519,14 +288413,14 @@ tooth socket https://upload.wikimedia.org/wikipedia/commons/2/2e/Alveole_zahn.jpg - + - + MESH-modified @@ -288698,7 +288592,7 @@ - + The sella turcica is a saddle-shaped depression in the sphenoid bone at the base of the human skull. [WP,unvetted]. for consistency with FMA we have a separate class for the cavity of the sella turcica CALOHA:TS-2342 @@ -288717,7 +288611,7 @@ sella turcica http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png - + @@ -288730,7 +288624,7 @@ - + FMA @@ -288774,7 +288668,10 @@ - + + + + @@ -288787,7 +288684,12 @@ - + + + + + + @@ -288822,22 +288724,12 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-male/v1.3/assets/3d-vh-m-pelvis.glb - - - - FMA - - - - - FMA - @@ -289851,7 +289743,7 @@ - + @@ -289897,14 +289789,14 @@ temporomandibular joint http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray309.png - + - + FMA-abduced-lr @@ -290001,7 +289893,7 @@ - + @@ -290038,7 +289930,7 @@ calcaneal tendon http://upload.wikimedia.org/wikipedia/commons/3/3c/Achilles-tendon.jpg - + @@ -290051,7 +289943,7 @@ - + FMA @@ -290105,7 +289997,7 @@ - + The passage in the lower abdominal wall through which the spermatic cord in the male or the round ligament in the female, nerves and vessels pass from the pelvic cavity to the scrotum or labia majora, respectively. In most mammals the canal remains open, and the testis can pass from the scrotum to the abdominal cavity. In humans the canal closes after testicular descent[DOI:10.1046/j.1469-7580.2002.00087.x] In tammar wallabies, closes between days 50 and 60 pp[DOI:10.1046/j.1469-7580.2002.00087.x] @@ -290124,7 +290016,7 @@ inguinal canal http://upload.wikimedia.org/wikipedia/commons/b/b4/Gray1227.png - + @@ -290137,7 +290029,7 @@ - + Wikipedia @@ -290225,12 +290117,20 @@ - + + + + - + + + + + + @@ -290256,22 +290156,6 @@ intrahepatic bile duct - - - - - - - - - FMA - - - - - - MA - @@ -290312,7 +290196,7 @@ - + A small bulge in the small intestine present at birth. It is a vestigial remnant of the omphalomesenteric duct. finding in ncit; GALT in chickens FMA:14967 @@ -290329,14 +290213,14 @@ UBERON:0003705 Meckel's diverticulum - + - + Wikipedia @@ -290389,7 +290273,7 @@ - + Either of two pairs of folds of mucous membrane projecting into the larynx. we follow FMA in modeling this is mucous membrane plus ligament BTO:0005084 @@ -290410,14 +290294,14 @@ laryngeal vocal fold - + - + FMA-abduced-lr @@ -290475,7 +290359,7 @@ - + @@ -290505,14 +290389,14 @@ sinus of Valsalva http://upload.wikimedia.org/wikipedia/commons/5/54/Gray497.png - + - + FMA MP @@ -290623,8 +290507,8 @@ - - + + A circle of arteries that supply blood to the brain. The Circle of Willis comprises the following arteries: Anterior cerebral artery (left and right); Anterior communicating artery; Internal carotid artery (left and right); Posterior cerebral artery (left and right); Posterior communicating artery (left and right).The basilar artery and middle cerebral arteries, supplying the brain, are also considered part of the circle. In zebrafish, the circle of vessels comprised of the basal communicating artery (BCA) and posterior communicating segments (PCS) superficially resemble but are not homologous to the human circle of Willis arterial circle @@ -290646,24 +290530,24 @@ circle of Willis http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg - + - + - + FMA-modified - + FMA-modified @@ -291203,7 +291087,7 @@ - + @@ -291230,14 +291114,14 @@ recurrent laryngeal nerve - + - + Wikipedia @@ -291357,7 +291241,7 @@ - + Any of the rapidly adapting mechanoreceptors found in subcutaneous tissue beneath both hairy and glabrous skin, and which normally contain an afferent nerve fiber surrounded by a capsule with multiple concentric layers. may also be present in the mesentery of cats, in pancreas, in lymph nodes [ISBN:9780849388118] consists of a nerve fiber, an inner core of modified Schwann cells, a subcapsular space and a capsule [ISBN:9780849388118] @@ -291393,7 +291277,7 @@ Pacinian corpuscle http://upload.wikimedia.org/wikipedia/commons/5/52/Gray935.png - + @@ -291406,7 +291290,7 @@ - + may also be located in organs - check @@ -292091,7 +291975,7 @@ - + The central part of the thoracic cavity enclosed by the left and right pleurae. mediastinal CALOHA:TS-2338 @@ -292112,14 +291996,14 @@ mediastinum http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png - + - + FMA @@ -292326,7 +292210,7 @@ - + @@ -292343,14 +292227,14 @@ UBERON:0003820 prostate bud - + - + PMID:18977204 @@ -292390,7 +292274,7 @@ - + A bone of the metapodial skeleton. EMAPA:37284 MA:0000301 @@ -292403,14 +292287,14 @@ UBERON:0003821 metapodium bone - + - + https://github.com/obophenotype/uberon/wiki/Skeleton-partonomy-Design-Pattern @@ -292469,7 +292353,7 @@ - + @@ -292517,14 +292401,14 @@ forelimb stylopod - + - + MA @@ -292631,7 +292515,7 @@ - + @@ -292691,14 +292575,14 @@ hindlimb zeugopod - + - + MA @@ -293225,7 +293109,7 @@ - + Any muscle organ that is part of a thorax [Automatically generated definition]. MA:0000561 muscle organ of thorax @@ -293234,14 +293118,14 @@ UBERON:0003830 thoracic segment muscle - + - + prolog @@ -293358,7 +293242,7 @@ - + Any muscle organ that is part of a esophagus [Automatically generated definition]. merge muscle and muscle layer? EMAPA:26983 @@ -293374,14 +293258,14 @@ UBERON:0003832 esophagus muscle - + - + MA @@ -294400,7 +294284,7 @@ - + Epithelium that is part of a developing tooth or dental organ. see comments for dental organ. todo - full developmental relationships @@ -294424,14 +294308,14 @@ dental epithelium - + - + epithelium JB @@ -294675,7 +294559,7 @@ - + @@ -294707,14 +294591,14 @@ thymus epithelium - + - + PMID:21293377 @@ -295298,12 +295182,20 @@ - + + + + - + + + + + + A neural plate that develops_from a future spinal cord. Neural plate that is part of the spinal cord. [Bgee_curator][VHOG] (...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...)[well established][VHOG] @@ -295315,16 +295207,6 @@ UBERON:0003854 spinal cord neural plate - - - - - - - - - ZFA - @@ -295442,7 +295324,7 @@ - + @@ -295467,14 +295349,14 @@ uncondensed odontogenic mesenchyme - + - + see comments @@ -295554,7 +295436,7 @@ - + Mesenchyme that is part of a developing upper eyelid [Automatically generated definition]. EHDAA2:0002117 EHDAA:9051 @@ -295566,14 +295448,14 @@ UBERON:0003857 upper eyelid mesenchyme - + - + cjm @@ -295624,7 +295506,7 @@ - + Mesenchyme that is part of a developing lower eyelid [Automatically generated definition]. EHDAA2:0001017 EHDAA:9045 @@ -295636,14 +295518,14 @@ UBERON:0003858 lower eyelid mesenchyme - + - + EHDAA2 @@ -297580,7 +297462,7 @@ - + The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. consider merging with coelom. TODO - add spatial relationships to halves of LPM. Note the OG places XAO and ZFA coelem terms here. editor note: TODO check ZFA, which appears to be a structure present in adults (...) I regard it unlikely that coeloms of all bilaterian animals are comparable and evolved very early. Considering all these questions, few convincing characters concerning the evolution of body cavities remain to be named. (...) A segmental coelom appears to have evolved at least two times, in Annelida and in Myomerata (Acrania and Craniota).[well established][VHOG] @@ -297595,14 +297477,14 @@ intraembryonic coelom - + - + Wikipedia @@ -297756,7 +297638,7 @@ - + @@ -297807,14 +297689,14 @@ fallopian tube http://upload.wikimedia.org/wikipedia/commons/6/68/Scheme_female_reproductive_system-en.svg - + - + FMA-abduced-lr @@ -297889,7 +297771,7 @@ - + Paired ducts of the embryo that run down the lateral sides of the urogenital ridge and terminate at the mullerian eminence in the primitive urogenital sinus. In the female, they will develop to form the fallopian tubes, uterus, and the upper portion of the vagina; in the male, they are lost. These ducts are made of tissue of mesodermal origin[WP]. develops either by lengthwise splitting of the archinephric duct (in chondrichthyans and some amphibians) or by a elongated invagination of the coelomic epithelium (other vertebrates) In males, the oviducts regress. The cranial end of the oviduct maintains an opening into the coelom (which primitively may have been the anteriormost coelomic funnels connecting the nephrocoel with the coelom). This opening is the ostium tubae[USM]. Either of the paired embryonic ducts developing into the uterine tubes, uterus, and vagina in the female and becoming largely obliterated in the male. [TFD][VHOG] Transient developmental organ which gives rise to oviducts in female (documented to persist in some male frogs).[AAO] @@ -297918,14 +297800,14 @@ Mullerian duct http://upload.wikimedia.org/wikipedia/commons/6/6d/Gray1109.png - + - + Wikipedia @@ -298066,8 +297948,8 @@ - - + + @@ -298101,11 +297983,11 @@ liver primordium - + - + @@ -298118,19 +298000,13 @@ - - XAO - - - - - + EHDAA2 - + ventral foregut endoderm Zaret 1996 @@ -298326,7 +298202,7 @@ - + @@ -298345,14 +298221,14 @@ UBERON:0003898 skeletal muscle tissue of trunk - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -298465,7 +298341,7 @@ - + @@ -298496,14 +298372,14 @@ horizontal septum - + - + ISBN:0073040584 @@ -298546,7 +298422,10 @@ - + + + + @@ -298564,7 +298443,12 @@ - + + + + + + The part of the retina that contains neurons and photoreceptor cells[GO]. (...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG] @@ -298595,16 +298479,6 @@ retinal neural layer - - - - - - - - - Bgee:AN - @@ -298675,7 +298549,7 @@ - + @@ -298698,14 +298572,14 @@ bursa of Fabricius - + - + Wikipedia @@ -299576,7 +299450,7 @@ - + @@ -299605,14 +299479,14 @@ pancreas primordium http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png - + - + Wikipedia @@ -299654,16 +299528,16 @@ - - + + - - + + The embryonic pancreas develops from two separate anlagen in the foregut epithelium, one dorsal and two ventral pancreatic buds[PMID]. EFO:0003470 EMAPA:35645 @@ -299683,19 +299557,19 @@ http://upload.wikimedia.org/wikipedia/commons/4/49/Suckale08FBS_fig1_pancreas_development.jpeg http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png - + - + - + - + @@ -299708,26 +299582,26 @@ - + EHDAA2 - + Wikipedia:Pancreas#Embryological_development - + zebrafish Wikipedia:Pancreatic_bud - + EHDAA2-inferred @@ -299769,8 +299643,8 @@ - - + + Pancreatic bud that gives rise to the accessory pancreatic duct. The pancreatic bud that gives rise to the accessory pancreatic duct.[AAO] In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG] @@ -299797,24 +299671,24 @@ dorsal pancreatic bud http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png - + - + - + EHDAA2 - + XAO @@ -299861,8 +299735,8 @@ - - + + Pancreatic bud that gives rise to the major pancreatic duct. In chick, Xenopus laevis, and the teleost fish Medaka, the pancreas develops from three buds that emerge from the gut tube, two from its ventral aspect, and one from its dorsal aspect. In mouse, although there are initially three buds that arise from the gut tube at the point of contact between the endoderm and the vasculature, the pancreas develops from only two of these buds, one dorsal and one ventral. (...) In this study, we use a transgenic zebrafish line (...). We provide evidence for the existence of two distinct pancreatic anlagen - a ventral anterior bud and a dorsal posterior bud - that join to form the definitive pancreas (reference 1); The pancreas develops from the fusion of distinct endoderm-derived dorsal and ventral diverticula. In humans, by day 35 of development, the ventral pancreatic bud begins to migrate backwards and comes into contact and eventually fuses with the dorsal pancreatic bud during the sixth week of development (reference 2).[well established][VHOG] The ventral pancreatic bud becomes the head and uncinate process, and comes from the hepatic diverticulum[WP] @@ -299889,24 +299763,24 @@ ventral pancreatic bud http://upload.wikimedia.org/wikipedia/commons/d/db/Gray982.png - + - + - + EHDAA2 - + PMID:16417468 WP @@ -299939,7 +299813,7 @@ - + @@ -299965,14 +299839,14 @@ photoreceptor inner segment layer - + - + MA @@ -300011,7 +299885,7 @@ - + @@ -300036,14 +299910,14 @@ photoreceptor outer segment layer - + - + MA @@ -301967,7 +301841,7 @@ - + @@ -302003,14 +301877,14 @@ rete testis http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg - + - + Wikipedia @@ -302046,8 +301920,8 @@ - - + + @@ -302071,24 +301945,24 @@ styloid process of temporal bone http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png - + - + - + ISBN:0073040584 - + MP-implied-by-def @@ -302212,7 +302086,7 @@ - + The small parasympathetic ganglion that supplies nerve fibers to the lacrimal, nasal, palatine and pharyngeal glands. BAMS:GptVII @@ -302235,14 +302109,14 @@ pterygopalatine ganglion http://upload.wikimedia.org/wikipedia/commons/a/a9/Gray779.png - + - + definitional @@ -302737,7 +302611,7 @@ - + One of the conchae of the ethmoid bone, which occupy the caudal part of the nasal fossae and form the lateral and superior portions of the turbinate bones in mammals[MP]. The ethmoturbinals are associated with the cribiform plate. They are covered with olfactory epithelium. Primarily, they serve to increase the surface area over which olfactory receptor neurons can come in contact with respiratory air. These olfactory receptor nerves then synapse with the mitral cells of the olfactory lobes through the cribiform plate in the manner described above[Palaeos]. FMA considers nasal concha and nasal concha of ethmoid bone to be synonymous. We disambiguate these here EMAPA:37914 @@ -302751,14 +302625,14 @@ nasal concha of ethmoid bone - + - + ISBN:0073040584 @@ -302800,7 +302674,7 @@ - + @@ -302835,7 +302709,7 @@ upper part of vagina - + @@ -302848,7 +302722,7 @@ - + EMAPA @@ -304081,7 +303955,7 @@ - + @@ -304110,7 +303984,7 @@ interventricular foramen of CNS - + @@ -304123,7 +303997,7 @@ - + MP @@ -304333,8 +304207,8 @@ - - + + @@ -304374,11 +304248,11 @@ hyoid bone greater horn - + - + @@ -304391,13 +304265,13 @@ - + FMA-abduced-lr - + Wikipedia @@ -304544,8 +304418,8 @@ - - + + @@ -304576,11 +304450,11 @@ hyoid bone lesser horn - + - + @@ -304593,13 +304467,13 @@ - + FMA-abduced-lr - + MP-implied-by-def @@ -305184,8 +305058,8 @@ - - + + The embryonic pseudostratified epithelium of the fourth cerebellar ventricle that eventually forms the vermis and ventral neuroepithelium. DHBA:12698 EHDAA2:0004401 @@ -305196,11 +305070,11 @@ cerebellar plate - + - + @@ -305213,13 +305087,13 @@ - + EHDAA2 - + EHDAA2 @@ -305438,7 +305312,7 @@ - + One of the folds of skin which form the inner lips on both sides of the vaginal opening. FMA:20374 MA:0002845 @@ -305457,14 +305331,14 @@ labium minora http://upload.wikimedia.org/wikipedia/commons/b/b7/Vulva_labeled_english.jpg - + - + Wikipedia @@ -305551,7 +305425,7 @@ - + A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells. Not to be confused with 'dermatome segment of skin'. @@ -305578,7 +305452,7 @@ dermatome http://upload.wikimedia.org/wikipedia/commons/f/f3/Gray64.png - + @@ -305591,7 +305465,7 @@ - + EHDAA2-abduced @@ -305647,7 +305521,7 @@ - + The mesenchymal cells that give rise to the corneal endothelium, corneal stroma, sclera, iris stroma, ciliary muscle, ciliary stroma, and trabecular meshwork of the eye[MP]. Periocular mesenchyme (PM) is a mesencephalic neural crest derived cell population which as a result of an interaction with the retinal pigment epithelium forms the scleral cartilage of the avian eye Check XAO once it has a definition. @@ -305658,14 +305532,14 @@ periocular mesenchyme - + - + PMID:3709965 @@ -305807,7 +305681,7 @@ - + @@ -305826,14 +305700,14 @@ spongiotrophoblast layer - + - + PMID:19829370 @@ -306210,7 +306084,7 @@ - + The vascular structure encircling the anterior chamber of the eye, through which the aqueous humor is returned to the blood circulation. EMAPA:37456 FMA:51873 @@ -306228,14 +306102,14 @@ canal of Schlemm - + - + FMA/obol @@ -306632,7 +306506,7 @@ - + @@ -306650,14 +306524,14 @@ cortical intermediate zone - + - + Wikipedia @@ -306752,7 +306626,7 @@ - + The nodules of antigen-activated, differentiating B cells, follicular dendritic cells, antigen-presenting T cells and macrophages in the spleen white pulp. EMAPA:37961 @@ -306763,14 +306637,14 @@ spleen secondary B follicle - + - + CL:tm @@ -306804,7 +306678,7 @@ - + The spherical enlargement at the base of each semicircular canal where they connect with the utricle, containing the crista ampullaris which detects movement of the fluid within the canals. TODO check duct vs canal. Also check FMA - has many subtypes of semicircular canal such as 'ampulla of anterior semicircular canal' EMAPA:32831 @@ -306819,14 +306693,14 @@ semicircular canal ampulla http://upload.wikimedia.org/wikipedia/commons/6/65/Vestibular_system%27s_semicircular_canal-_a_cross-section.jpg - + - + MA @@ -307386,8 +307260,8 @@ - - + + @@ -307408,11 +307282,11 @@ primitive pit - + - + @@ -307425,13 +307299,13 @@ - + EHDAA2 - + EHDAA2 @@ -307535,7 +307409,7 @@ - + @@ -307561,14 +307435,14 @@ biliary ductule - + - + BTO @@ -307671,7 +307545,7 @@ - + The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. consider merging with 'ventricular zone'; note that the MA class probably does not belong here, as this is an embryonic structure The layer of undifferentiated, proliferating cells that line the neural tube lumen @@ -307688,7 +307562,7 @@ neural tube ventricular layer - + @@ -307701,7 +307575,7 @@ - + NCBIBook:NBK10047 @@ -307761,7 +307635,7 @@ - + @@ -307784,7 +307658,7 @@ neural tube mantle layer - + @@ -307797,7 +307671,7 @@ - + by division NCBIBook:NBK10047 @@ -307834,7 +307708,7 @@ - + @@ -307850,14 +307724,14 @@ neural tube marginal layer - + - + forms from axons @@ -307964,7 +307838,7 @@ - + @@ -307988,14 +307862,14 @@ neural tube basal plate - + - + Shh Swenson @@ -308119,8 +307993,8 @@ - - + + The lateral area of the two branches of a horseshoe-shaped mesenchymal swelling in the future nasal region of the embryo; it separates the olfactory pit from the developing eye and the ala of the nose/snout develops from it. EHDAA2:0000916 @@ -308138,24 +308012,24 @@ lateral nasal prominence http://upload.wikimedia.org/wikipedia/commons/2/2d/Gray48.png - + - + - + EHDAA2 - + Wikipedia @@ -308203,14 +308077,14 @@ - + - + The central area of the two limbs of a horseshoe-shaped mesenchymal swelling that lie medial to the olfactory placode or pit in the future nasal region of the embryo; it joins with the ipsilateral maxillary prominence in the formation of half of the upper jaw, and the nasal tip and philtrum of the upper lip develop from it. Fusion of right and left medial nasal processes forms a primary palate rostrally and the nasal septum caudally. The incisive bone, including upper incisor teeth and the rostral up- per lip, are derived from the primary palate. The nasal septum consists of bone, cartilage, and a patch of soft tissue membrane that separates right & left halves of the nasal cavity. EHDAA2:0001076 @@ -308230,24 +308104,24 @@ medial nasal prominence http://upload.wikimedia.org/wikipedia/commons/8/85/Gray45.png - + - + - + EHDAA2 - + Wikipedia @@ -308295,14 +308169,14 @@ - + - + The forebrain region that coordinates sensory signaling arising from the vomeronasal organ; it is located on the dorsal-posterior portion of the main olfactory bulb, and the axons that leave the accessory olfactory bulb project to targets in the amygdala and hypothalamus. @@ -308327,24 +308201,24 @@ Projection notes: Site of termination of vomeronasal nerve; projects to: other parts of pallial amygdala, medial amygdala, subpallial nucleus (Butler and Hodos) accessory olfactory bulb - + - + - + cjm - + ISBN:0471888893 @@ -308471,7 +308345,7 @@ - + The nucleus composed of the globose and emoliform nuclei of the cerebellum; in some mammalian species the globose nucleus is not distinguishable. The interposed nucleus is a deep nucleus of the cerebellum and is composed of the globose nuclei and the emboliform nuclei. It is located in in the roof (dorsal aspect) of the fourth ventricle, lateral to the fastigial nucleus. It receives its afferent supply from the anterior lobe of the cerebellum and sends output via the superior cerebellar peduncle to the red nucleus. @@ -308494,14 +308368,14 @@ cerebellum interpositus nucleus - + - + ISBN:0471888893 @@ -308667,7 +308541,7 @@ - + @@ -308697,7 +308571,7 @@ cerebellum vermis lobule II - + @@ -308710,7 +308584,7 @@ - + ABA @@ -308750,7 +308624,7 @@ - + @@ -308782,7 +308656,7 @@ cerebellum vermis lobule III - + @@ -308795,7 +308669,7 @@ - + ABA @@ -308829,7 +308703,7 @@ - + @@ -308858,7 +308732,7 @@ cerebellum vermis lobule IV - + @@ -308871,7 +308745,7 @@ - + ABA @@ -308899,7 +308773,7 @@ - + The uvula (uvular lobe) forms a considerable portion of the inferior vermis; it is separated on either side from the tonsil by the sulcus valleculC&, at the bottom of which it is connected to the tonsil by a ridge of gray matter, indented on its surface by shallow furrows, and hence called the furrowed band. BAMS:UVU BAMS:Uvu @@ -308928,7 +308802,7 @@ The uvula is the second largest lobule, following the culmen. It pertains to the paleocerebellum and is separated from the nodule by the posterolateral fissure. cerebellum vermis lobule IX - + @@ -308941,7 +308815,7 @@ - + NIFSTD @@ -309005,7 +308879,7 @@ - + @@ -309039,7 +308913,7 @@ cerebellum vermis lobule V - + @@ -309052,7 +308926,7 @@ - + ABA @@ -309098,7 +308972,7 @@ - + @@ -309132,7 +309006,7 @@ cerebellum vermis lobule VI - + @@ -309145,7 +309019,7 @@ - + MP @@ -309376,7 +309250,7 @@ - + @@ -309408,7 +309282,7 @@ cerebellum vermis lobule X - + @@ -309421,7 +309295,7 @@ - + NIFSTD @@ -309481,8 +309355,8 @@ - - + + @@ -309511,24 +309385,24 @@ genital labium - + - + - + MA - + FMA-abduced-lr @@ -309568,7 +309442,7 @@ - + One of the folds of skin which form the outer lips on both sides of the vaginal opening. FMA:20367 MA:0002844 @@ -309587,14 +309461,14 @@ labium majora http://upload.wikimedia.org/wikipedia/commons/2/26/Gray1229.png - + - + posterior labial commissure Wikipedia @@ -310293,7 +310167,7 @@ - + One of the two jaw ridges either on the roof of the mouth between the upper teeth and the hard palate or on the bottom of the mouth behind the lower teeth[WP]. The alveolar ridges contain the sockets (alveoli) of the teeth[HP]. in BTO, this is part of an embryo BTO:0001383 @@ -310315,14 +310189,14 @@ alveolar ridge - + - + PMID:19767574 Wikipedia @@ -310461,7 +310335,7 @@ - + Horizontal piece of cartilage located outside the ear canal that divides the upper and lower parts of the ear. FMA:61024 NCIT:C32410 @@ -310474,14 +310348,14 @@ crus of ear - + - + Wikipedia-uncited @@ -310517,9 +310391,9 @@ - - - + + + Part of the cranium, the clivus is a shallow depression behind the dorsum sellC& that slopes obliquely backward. It forms a gradual sloping process at the anterior most portion of the basilar occipital bone at its junction with the sphenoid bone. On axial planes, it sits just posterior to the sphenoid sinuses. Just lateral to the clivus bilaterally is the foramen lacerum which contains the internal carotid artery, proximal to its anastamosis with the Circle of Willis. Posterior to the clivus is the basilar artery. The clivus supports the upper part of the pons. check relationships. FMA:75747 @@ -310538,15 +310412,15 @@ clivus of occipital bone http://upload.wikimedia.org/wikipedia/commons/c/c5/Clivus.png - + - + - + @@ -310559,19 +310433,19 @@ - + FMA - + HP:0010558 - + Wikipedia @@ -310938,7 +310812,7 @@ - + @@ -310963,7 +310837,7 @@ tympanic cavity http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png - + @@ -310976,7 +310850,7 @@ - + EHDAA2 @@ -311273,7 +311147,7 @@ - + An internal pocketing of pharyngeal endoderm that contacts a region of ectoderm (a pharyngeal cleft) and interdigitates in the anterior and posterior directions with the pharyngeal arches. Outpocketings of pharyngeal endoderm that interdigitate with the neural crest derived pharyngeal arches. The pouches later fuse with the surface ectoderm to form the gill slits. Crump et al, 2004.[TAO] A conserved feature of all vertebrate embryos is the presence of a series of bulges on the lateral surface of the head, the pharyngeal arches; it is within these structures that the nerves, muscles and skeletal components of the pharyngeal apparatus are laid down. The pharyngeal arches are separated by endodermal outpocketings, the pharyngeal pouches.[well established][VHOG] @@ -311305,14 +311179,14 @@ The pouches are polarized structures. For example, whereas the rostral half of each pouch expresses Bmp-7, the caudal half expresses FGF-8 and the dorsal aspect of each pouch is marked via its expression of Pax-1. each pouch has an individual sense of identity. Shh expression is a prominent early feature of the caudal endoderm of the second arch, and individual pouches mark the anterior limits of expression of Hox genes within the pharyngeal endoderm; Hox-a2 has a rostral boundary at the second pouch, Hox-a3 at the third pouch and Hox-a4 at the most caudal pouch[PMID:16313389] pharyngeal pouch - + - + EHDAA2 ZFA @@ -311926,7 +311800,7 @@ - + A myocardium trabecular layer that is part of a cardiac ventricle. TODO - check FMA FMA:83511 @@ -311939,14 +311813,14 @@ trabecular layer of ventricle - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -311991,7 +311865,7 @@ - + The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle. The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle.[TAO] EMAPA:37833 @@ -312006,14 +311880,14 @@ compact layer of ventricle - + - + ZFA @@ -312063,9 +311937,9 @@ - - - + + + @@ -312097,34 +311971,34 @@ optic vesicle http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray863.png - + - + - + - + ZFA - + GO-def - + ZFA @@ -312291,7 +312165,7 @@ - + The sensory trigeminal nerve nuclei are the largest of the cranial nerve nuclei, and extend through the whole of the midbrain, pons and medulla. The nucleus is divided into three parts, from rostral to caudal (top to bottom in humans): * The mesencephalic nucleus * The chief sensory nucleus (or pontine nucleus or main sensory nucleus or primary nucleus) * The spinal trigeminal nucleus[WP]. TODO - check ZFA link. note this is part of medulla in ZFA, but we do not include this link here as it leads to inconsistencies EMAPA:35884 @@ -312311,14 +312185,14 @@ trigeminal sensory nucleus http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png - + - + MA @@ -312390,8 +312264,8 @@ - - + + In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the loop of Henle. It has a brush border epithelial morphology[GO]. TODO - ensure definition works across species. @@ -312407,24 +312281,24 @@ proximal tubule - + - + - + GO - + GO @@ -312483,7 +312357,7 @@ - + The intermediate tubule is a nephron tubule that lies between the proximal and distal tubules. TODO - check for applicability across species FMA:17718 @@ -312492,14 +312366,14 @@ UBERON:0004136 intermediate tubule - + - + FMA @@ -312602,8 +312476,8 @@ - - + + A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. this term denotes the primary heart field; GO:0003128 denotes the superclass of primary and secondary: specific region of the lateral mesoderm into the area which will form the primary beating heart tube[GO:0003138] XAO:0004185 @@ -312615,24 +312489,24 @@ UBERON:0004140 primary heart field - + - + - + GO:0003128 - + https://orcid.org/0000-0003-3308-6245 @@ -312691,7 +312565,7 @@ - + An epithelial tube that will give rise to the mature heart. the paired, longitudinal, endothelial-lined channels formed from the cardiogenic mesoderm in embryonic development; angiogenic cell clusters (aka angioblastic cords) located in a horse-shoe shape configuration in the cardiogenic plate coalesce to form the right and left endocardial heart tubes which then fuse in cephalo-caudal direction to form a single primitive heart tube. AAO:0010411 @@ -312710,14 +312584,14 @@ heart tube - + - + ZFA-modified @@ -312879,8 +312753,8 @@ - - + + The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. the intraventricular conduction system from the bundle of His to the distal Purkinje fibers, which carries the impulse to the ventricles. HPS @@ -312890,11 +312764,11 @@ UBERON:0004146 His-Purkinje system - + - + @@ -312907,13 +312781,13 @@ - + GO - + PMID:12626327 PMID:21234997 github:michaelerice @@ -313148,7 +313022,7 @@ - + The bulbus arteriosus is an elastic heart chamber[GO]. Multi-tissue structure that consists of three layers and through which the blood exits the heart. The bulbus arteriosus is a pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches[ZFA]. A pear shaped chamber that functions as a capacitor, maintaining continuous blood flow into the gill arches. The bulbus arteriosus has three distinct layers. Hu et al. 2000.[TAO] replaces conus arteriosis in cartilaginous fish @@ -313160,14 +313034,14 @@ bulbus arteriosus - + - + definitional @@ -313200,7 +313074,7 @@ - + Endocardial cushions project into the atrial canal, and, meeting in the middle line, unite to form the septum intermedium which divides the canal into two channels, the future right and left atrioventricular orifices[Gray's via WP]. SCTID:361468003 Wikipedia:Septum_intermedium @@ -313209,14 +313083,14 @@ ventricular septum intermedium http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray467.png - + - + Wikipedia @@ -313424,8 +313298,8 @@ - - + + An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium. propepicardial Proepicardial clusters in Zebrafish form on the pericardial wall, adjacent to the atrioventricular (AV) junction and near the venous pole[ZFA] @@ -313436,24 +313310,24 @@ UBERON:0004160 proepicardium - + - + - + todo check other taxa - + ZFA @@ -313619,8 +313493,8 @@ - - + + @@ -313637,24 +313511,24 @@ UBERON:0004164 branchiomeric muscle - + - + - + ISBN:0073040584 - + PMID:21610022 @@ -313699,13 +313573,13 @@ - + Missing definition for term UBERON:0004166. Please replace it using linked reference. check ZFA structures superior reticular formation medial column & tegmentum UBERON:0004166 superior reticular formation - + @@ -313718,7 +313592,7 @@ - + GO @@ -313735,7 +313609,7 @@ - + @@ -313766,14 +313640,14 @@ orbitofrontal cortex - + - + FMA MP @@ -313972,7 +313846,7 @@ - + The trigeminothalamic tract is one of the major routes of nociceptive and temperature signaling from the face. BAMS:tth BIRNLEX:4097 @@ -313985,14 +313859,14 @@ UBERON:0004171 trigeminothalamic tract - + - + GO @@ -314383,8 +314257,8 @@ - - + + A saclike structure of the prostate gland, comprised of at least three cell layers: an innermost layer of secretory columnar luminal epithelium, a middle layer of squamous basal epithelium that also contains neuroendocrine cells, transit amplifying cells, and stem cells, and an outer layer of smooth muscle intermixed with other stromal cells. the muscle layer is implicitly treated as outside the acinus @@ -314396,11 +314270,11 @@ prostate glandular acinus - + - + @@ -314413,13 +314287,13 @@ - + GO - + PMID:18977204 @@ -315454,8 +315328,8 @@ - - + + The S1 portion is the initial portion of the proximal convoluted tubule and is responsible for avid reabsorption of water and solutes[GO]. UBERON:0006432 @@ -315470,24 +315344,24 @@ proximal convoluted tubule segment 1 - + - + - + GO - + GO @@ -315522,8 +315396,8 @@ - - + + The S2 portion of the tubule is involved in reabsorption of water and sodium chloride[GO]. UBERON:0006433 @@ -315538,24 +315412,24 @@ proximal convoluted tubule segment 2 - + - + - + GO - + GO @@ -315589,8 +315463,8 @@ - - + + The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron. EMAPA:27681 ZFA:0005588 @@ -315599,24 +315473,24 @@ comma-shaped body - + - + - + cjm - + ZFA @@ -315638,8 +315512,8 @@ - - + + The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron. TODO EMAPA:27756 @@ -315651,24 +315525,24 @@ S-shaped body - + - + - + cjm - + GO @@ -316200,20 +316074,20 @@ - + The prebend segment is a part of the descending thin limb that lies before the bend and exhibits robust sodium chloride reabsorption. prebend segment UBERON:0004207 prebend segment of loop of Henle - + - + GO @@ -316416,7 +316290,7 @@ - + @@ -316454,14 +316328,14 @@ glomerular capillary - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -316892,8 +316766,8 @@ - - + + A portion of smooth muscle tissue that is part of a large intestine [Automatically generated definition]. MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa EMAPA:35469 @@ -316908,24 +316782,24 @@ UBERON:0004220 large intestine smooth muscle - + - + - + MA - + consider merging @@ -317006,7 +316880,7 @@ - + @@ -317042,14 +316916,14 @@ intestine smooth muscle - + - + consider merging @@ -319433,7 +319307,7 @@ - + A portion of smooth muscle tissue that is part of a small intestine [Automatically generated definition]. MA class may specifically mean muscle layer, but we treat as the sum of smooth muscle in both muscle layer and muscularis mucosa EMAPA:35783 @@ -319457,14 +319331,14 @@ small intestine smooth muscle - + - + consider merging @@ -320221,7 +320095,7 @@ - + A portion of smooth muscle tissue that is part of a prostate gland [Automatically generated definition]. BTO:0003159 @@ -320249,14 +320123,14 @@ prostate gland smooth muscle - + - + FMA @@ -321453,7 +321327,7 @@ - + Any muscle organ that is part of a hindlimb stylopod (upper leg)[Automatically generated definition]. UBERON:0000374 BTO:0001367 @@ -321468,14 +321342,14 @@ hindlimb stylopod muscle - + - + prolog @@ -321601,7 +321475,7 @@ - + Any muscle organ that is part of a forelimb zeugopod (lower arm)[Automatically generated definition]. EMAPA:32622 FMA:37371 @@ -321614,14 +321488,14 @@ UBERON:0004254 forelimb zeugopod muscle - + - + prolog @@ -321674,7 +321548,7 @@ - + Any muscle organ that is part of a forelimb stylopod (upper arm)[Automatically generated definition]. the FMA class 'muscle of arm' belongs here, do not move See notes on UBERON:0001460 for possible terminological confusion over term 'arm' @@ -321691,14 +321565,14 @@ forelimb stylopod muscle - + - + prolog @@ -321758,7 +321632,7 @@ - + Any muscle organ that is part of a hindlimb zeugopod (lower leg) [Automatically generated definition]. the FMA class 'muscle of leg' belongs here, do not move[cjm] @@ -321775,14 +321649,14 @@ hindlimb zeugopod muscle - + - + prolog @@ -323338,12 +323212,20 @@ - + + + + - + + + + + + @@ -323358,16 +323240,6 @@ eye muscle - - - - - - - - - MA - @@ -323485,7 +323357,7 @@ - + The bilaminar epithelium formed from the myotome and dermatome. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis. Within the dermomyotome there is also a medio-lateral difference. The central region makes dermis, the mesenchymal connective tissue of the back skin. The medial region (closest to neural tube) makes epaxial muscle, and the lateral region (furthest from neural tube) makes hypaxial muscle[http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=eurekah&part=A66768]. Epithelial sheet on the external surface of the somite that gives rise to trunk, muscle and dermis.[TAO] @@ -323507,7 +323379,7 @@ UBERON:0004290 dermomyotome - + @@ -323526,7 +323398,7 @@ - + EHDAA2 ZFA @@ -323771,8 +323643,8 @@ - - + + @@ -323791,24 +323663,24 @@ parasympathetic nerve - + - + - + NCBIBook:NBK10065 - + NCBIBook:NBK10065 @@ -327813,7 +327685,7 @@ - + @@ -327845,14 +327717,14 @@ Terminology notes. we include calvarium as a synonym, but Gray's Anatomy's list includes the Ethmoid and Sphenoid bone in the Calvaria. Some books (and HPO) state that calvaria consists of just the frontal bone, parietal bone, temporal bone, and occipital bone. Note vault may not be precisely equivalent to calvaria vault of skull - + - + small pharyngeal arch and sclerotomal contribution @@ -327911,11 +327783,11 @@ - - - - - + + + + + A membranous sac that develops from the posterior part of the alimentary canal in the embryos of mammals, birds, and reptiles, and it is important in the formation of the umbilical cord and placenta in mammals[VHOG]. A membranous sac that develops from the posterior part of the alimentary canal in the embryos of mammals, birds, and reptiles, and it is important in the formation of the umbilical cord and placenta in mammals. [TFD][VHOG] Structures homologous to the four extraembryonic membranes of reptiles and birds appear in mammals: amnion, chorion, yolk sac, and allantois.[well established][VHOG] @@ -327939,55 +327811,55 @@ allantois http://upload.wikimedia.org/wikipedia/commons/a/a5/Gray25.png - + - + - + - + - + - + EHDAA2-modified - + Hymans - + Hymans - + hindgut diverticulum endoderm ISBN:0073040584 - + ISBN:0073040584 @@ -328225,14 +328097,14 @@ - + - + Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition. distinction between trophectoderm and trophoblast unclear/inconsistent in many sources The outer cellular layer of the mammalian blastocyst. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.750, see_Kardong_KV][VHOG] @@ -328249,11 +328121,11 @@ trophectoderm - + - + @@ -328266,13 +328138,13 @@ - + EHDAA2 - + EHDAA2 @@ -328316,14 +328188,14 @@ - + - + @@ -328347,11 +328219,11 @@ gubernaculum (male or female) http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1138.png - + - + @@ -328364,13 +328236,13 @@ - + BTO - + Wikipedia @@ -328437,7 +328309,7 @@ - + @@ -328464,14 +328336,14 @@ developmentally_induced_by Fgf10, capable of initiating limb forming interactions between endoderm and mesoderm limb bud - + - + ISBN:9780878932504 @@ -329167,9 +329039,9 @@ - - - + + + The fibrous cord that connects the tip of the styloid process of the temporal bone to the lesser horn of the hyoid bone. FMA:72308 MA:0002957 @@ -329182,15 +329054,15 @@ stylohyoid ligament - + - + - + @@ -329203,19 +329075,19 @@ - + Wikipedia - + Wikipedia - + MP-implied-by-def @@ -329382,7 +329254,7 @@ - + @@ -329437,14 +329309,14 @@ pharyngeal arch artery http://upload.wikimedia.org/wikipedia/commons/8/84/Gray473.png - + - + ZFA @@ -329719,7 +329591,7 @@ - + A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. Acellular anatomical structure composed of collagen, Descemet's membrane is secreted as a basement membrane of the corneal endothelium. Located between the stroma and the corneal endothelium, it is approximately 0.15 micrometer thick at 6 months post-fertilization.[ZFIN] @@ -329750,14 +329622,14 @@ Descemet's membrane https://github.com/obophenotype/uberon/issues/15 - + - + Cline et al @@ -329836,7 +329708,7 @@ - + @@ -329864,14 +329736,14 @@ Reichert's cartilage - + - + EHDAA2 @@ -329977,6 +329849,7 @@ + @@ -334705,7 +334578,7 @@ - + @@ -334733,7 +334606,7 @@ metacarpus region https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg - + @@ -334746,7 +334619,7 @@ - + PHENOSCAPE:ni @@ -337015,12 +336888,20 @@ - + + + + - + + + + + + A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition]. Note placement of MA class based on parthood relationship FMA:261726 @@ -337029,16 +336910,6 @@ cardiac muscle tissue of myocardium - - - - - - - - - MA - @@ -338238,20 +338109,20 @@ - + A portion of trabecula carnea cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. FMA:84429 UBERON:0004525 cardiac muscle tissue of trabecula carnea of right ventricle - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -338280,20 +338151,20 @@ - + A portion of trabecula carnea cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. FMA:84430 UBERON:0004526 cardiac muscle tissue of trabecula carnea of left ventricle - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -339342,7 +339213,7 @@ - + Any of the series of white matter fiber tracts in the brain that run between the most lateral segment of the lentiform nucleus and the claustrum; the white matter of the external capsule contains fibers known as corticocortical association fibers which are responsible for connecting the cerebral cortex to another cortical area; the capsule appears as a thin white sheet of white matter and provides a route for cholinergic fibers from the basal forebrain to the cerebral cortex; it eventually joins the internal capsule around the lentiform nucleus. brain external capsule external capsule @@ -339367,14 +339238,14 @@ external capsule of telencephalon http://upload.wikimedia.org/wikipedia/commons/9/91/Telencephalon-Horiconatal.jpg - + - + FMA @@ -339421,7 +339292,7 @@ - + A zone of the ethmoid that is received into the ethmoidal notch of the frontal bone and roofs in the nasal cavities. [WP,modified]. BTO:0004141 EMAPA:19201 @@ -339438,14 +339309,14 @@ cribriform plate http://upload.wikimedia.org/wikipedia/commons/9/93/Gray149.png - + - + MA @@ -339676,7 +339547,7 @@ - + @@ -339721,7 +339592,7 @@ gastroesophageal sphincter - + @@ -339733,7 +339604,7 @@ - + MA @@ -340049,7 +339920,7 @@ - + EMAPA:37229 FMA:22926 @@ -340064,14 +339935,14 @@ Some sources distinguish between the "proper palmar digital veins", which are more distal, and the "common palmar digital veins", which are more proximal. proper palmar digital vein - + - + FMA/obol @@ -341168,7 +341039,7 @@ - + The third of the seven cervical vertebrae[ncit,modified]. under discussion: whether to generalize this beyond mammals, making it purely order-defined elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae @@ -341191,14 +341062,14 @@ mammalian cervical vertebra 3 - + - + FMA @@ -341239,7 +341110,7 @@ - + The fourth of the seven cervical vertebrae[ncit,modified]. elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae @@ -341259,14 +341130,14 @@ mammalian cervical vertebra 4 - + - + FMA @@ -341307,7 +341178,7 @@ - + The fifth of the seven cervical vertebrae[ncit,modified]. elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae @@ -341327,14 +341198,14 @@ mammalian cervical vertebra 5 - + - + FMA @@ -341375,7 +341246,7 @@ - + The sixth of the seven cervical vertebrae[ncit,modified]. elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae @@ -341395,14 +341266,14 @@ mammalian cervical vertebra 6 - + - + FMA @@ -341443,7 +341314,7 @@ - + Vertebra prominens is the proper name for the seventh cervical vertebra. The most distinctive characteristic of this vertebra is the existence of a long and prominent spinous process which is palpable from the skin surface, hence the name. This spinous process is thick, nearly horizontal in direction, not bifurcated, but terminating in a tubercle to which the lower end of the ligamentum nuchae is attached. The seventh cervical vertebra (C7) has the most prominent spinous process only in about 70% of people; in the remainder, either C6 or T1 (the first thoracic vertebra) will be the most prominent. The transverse processes are of considerable size, their posterior roots are large and prominent, while the anterior are small and faintly marked; the upper surface of each has usually a shallow sulcus for the eighth spinal nerve, and its extremity seldom presents more than a trace of bifurcation. The foramen transversarium may be as large as that in the other cervical vertebrae, but is generally smaller on one or both sides; occasionally it is double, sometimes it is absent. On the left side it occasionally gives passage to the vertebral artery; more frequently the vertebral vein traverses it on both sides; but the usual arrangement is for both artery and vein to pass in front of the transverse process, and not through the foramen. Sometimes the anterior root of the transverse process attains a large size and exists as a separate bone, which is known as a cervical rib. elements are to be defined spatially/topologically. all mammals have 7 cervical vertebrae @@ -341466,14 +341337,14 @@ mammalian cervical vertebra 7 - + - + FMA @@ -341587,7 +341458,7 @@ - + The second lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -341605,14 +341476,14 @@ lumbar vertebra 2 - + - + FMA @@ -341647,7 +341518,7 @@ - + The third lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -341665,14 +341536,14 @@ lumbar vertebra 3 - + - + FMA @@ -341707,7 +341578,7 @@ - + The fourth lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -341724,14 +341595,14 @@ lumbar vertebra 4 - + - + FMA @@ -341766,7 +341637,7 @@ - + The fifth lumbar vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -341784,14 +341655,14 @@ lumbar vertebra 5 - + - + FMA @@ -342089,7 +341960,7 @@ - + The second thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342107,14 +341978,14 @@ thoracic vertebra 2 - + - + FMA @@ -342155,7 +342026,7 @@ - + The third thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342173,14 +342044,14 @@ thoracic vertebra 3 - + - + FMA @@ -342221,7 +342092,7 @@ - + The fourth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342239,14 +342110,14 @@ thoracic vertebra 4 - + - + FMA @@ -342287,7 +342158,7 @@ - + The fifth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342305,14 +342176,14 @@ thoracic vertebra 5 - + - + FMA @@ -342353,7 +342224,7 @@ - + The sixth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342371,14 +342242,14 @@ thoracic vertebra 6 - + - + FMA @@ -342419,7 +342290,7 @@ - + The seventh thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342437,14 +342308,14 @@ thoracic vertebra 7 - + - + FMA @@ -342485,7 +342356,7 @@ - + The ninth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342503,14 +342374,14 @@ thoracic vertebra 9 - + - + FMA @@ -342551,7 +342422,7 @@ - + The tenth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342569,14 +342440,14 @@ thoracic vertebra 10 - + - + FMA @@ -342617,7 +342488,7 @@ - + The eleventh thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342635,14 +342506,14 @@ thoracic vertebra 11 - + - + FMA @@ -342683,7 +342554,7 @@ - + The twelfth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. elements are to be defined spatially/topologically @@ -342701,14 +342572,14 @@ thoracic vertebra 12 - + - + FMA @@ -342950,7 +342821,7 @@ - + @@ -342992,14 +342863,14 @@ renal afferent arteriole http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -343069,7 +342940,7 @@ - + @@ -343099,14 +342970,14 @@ renal efferent arteriole http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -343611,7 +343482,7 @@ - + @@ -343644,7 +343515,7 @@ liver lobule - + @@ -343657,7 +343528,7 @@ - + FMA MA @@ -343789,7 +343660,7 @@ - + @@ -343821,14 +343692,14 @@ sphenoid bone pterygoid process http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png - + - + FMA-abduced-lr @@ -344158,8 +344029,8 @@ - - + + The temporal process of the zygomatic bone, directed backward and medialward, is concave, presenting medially a rough, triangular area, for articulation with the maxilla, and laterally a smooth, concave surface, the upper part of which forms the anterior boundary of the temporal fossa, the lower a part of the infratemporal fossa. Near the center of this surface is the zygomaticotemporal foramen for the transmission of the zygomaticotemporal nerve. EMAPA:37807 @@ -344176,24 +344047,24 @@ temporal process of zygomatic bone http://upload.wikimedia.org/wikipedia/commons/d/da/Gray166.png - + - + - + MA - + MA @@ -344242,8 +344113,8 @@ - - + + The zygomatic process of the temporal bone is a long, arched process projecting from the lower part of the squamous portion of the temporal bone. It articulates with the zygomatic bone. This process is at first directed lateralward, its two surfaces looking upward and downward; it then appears as if twisted inward upon itself, and runs forward, its surfaces now looking medialward and lateralward. UBERON:0004653 EMAPA:19015 @@ -344260,24 +344131,24 @@ zygomatic process of temporal bone http://upload.wikimedia.org/wikipedia/commons/9/96/Gray137.png - + - + - + MA - + MA @@ -344916,7 +344787,7 @@ - + @@ -344947,14 +344818,14 @@ interventricular septum membranous part - + - + Wikipedia @@ -345314,7 +345185,7 @@ - + The portion of the frontal lobe medial to the medial orbital gyrus is named the gyrus rectus (or straight gyrus), and is continuous with the superior frontal gyrus on the medial surface. A specific function for the gyrus rectus has not yet been elucidated. BAMS:GRe @@ -345337,7 +345208,7 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + @@ -345350,7 +345221,7 @@ - + FMA @@ -345893,7 +345764,7 @@ - + A triangular field that is a lateralward projection of the postero-lateral part of the anterior column[WP, modified by cjm]. TODO - check relationship to spinal cord lateral column. in FMA funiculus=white and horn=grep BIRNLEX:2666 @@ -345918,14 +345789,14 @@ spinal cord lateral horn http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray675.png - + - + FMA-abduced-lr @@ -346416,7 +346287,7 @@ - + Part of fornix adjacent to the crura where they join together at the midline underneath the corpus callosum. The columns (anterior pillars; fornicolumns) of the fornix arch downward in front of the interventricular foramen and behind the anterior commissure, and each descends through the gray substance in the lateral wall of the third ventricle to the base of the brain, where it ends in the corpus mammillare. [WP,unvetted][Wikipedia:Columns_of_fornix]. @@ -346444,14 +346315,14 @@ body of fornix http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png - + - + FMA NIF @@ -346663,7 +346534,7 @@ - + A transitional zone between the presubiculum and the entorhinal area in the mouse (Paxinos-2001), the rat (Swanson-1998) and the primate (Zilles-1990). Defined on the basis of cytoarchitecture, it is more similar to the presubiculum than to the entorhinal area (Zilles-1990). (from Brain Info). @@ -346687,14 +346558,14 @@ UBERON:0004683 parasubiculum - + - + NIFSTD @@ -346758,8 +346629,8 @@ - - + + The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. BAMS:RA EMAPA:35721 @@ -346787,25 +346658,25 @@ raphe nuclei http://upload.wikimedia.org/wikipedia/commons/9/94/Gray694.png - + - + - + GO Wikipedia - + Wikipedia @@ -346909,7 +346780,7 @@ - + @@ -346922,7 +346793,7 @@ - + @@ -346949,11 +346820,11 @@ gastro-splenic ligament http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray1039.png - + - + @@ -346966,14 +346837,14 @@ - + FMA Wikipedia - + MA-modified Wikipedia @@ -347032,8 +346903,8 @@ - - + + @@ -347064,11 +346935,11 @@ Multiple sources support greater omentum assignment. E.g. http://medical-dictionary.thefreedictionary.com/splenorenal+ligament. We change the MA part_of assignment to develops_from lieno-renal ligament - + - + @@ -347081,13 +346952,13 @@ - + FMA - + MA-modified @@ -347221,7 +347092,7 @@ - + The nasofrontal vein is a vein in the eye which drains to the superior ophthalmic vein. EMAPA:37227 @@ -347234,14 +347105,14 @@ naso-frontal vein - + - + FMA/obol @@ -347269,7 +347140,7 @@ - + A vein running parallel to the superior and inferior pancreatico-duodenal arteries that drains blood from the pancreas and duodenum into the superior mesenteric or portal veins. EMAPA:37177 FMA:15398 @@ -347286,14 +347157,14 @@ UBERON:0004690 pancreaticoduodenal vein - + - + FMA/obol @@ -348211,7 +348082,6 @@ - @@ -348260,13 +348130,21 @@ - + + + + - + + + + + + @@ -348291,7 +348169,7 @@ - + @@ -348313,30 +348191,14 @@ paired limb/fin - - - - - + - - VSAO - - - - - - VSAO - - - - - + definitional @@ -348418,7 +348280,7 @@ - + @@ -348439,14 +348301,14 @@ pelvic appendage - + - + definitional @@ -348515,7 +348377,7 @@ - + @@ -348538,14 +348400,14 @@ pectoral appendage - + - + definitional @@ -349551,7 +349413,7 @@ - + @@ -349575,14 +349437,14 @@ crista ampullaris http://upload.wikimedia.org/wikipedia/commons/e/ec/Semicircular_canal_-_ampulla.png - + - + MA @@ -349835,7 +349697,7 @@ - + @@ -349880,14 +349742,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + Wikipedia @@ -350798,8 +350660,8 @@ - - + + @@ -350813,25 +350675,25 @@ UBERON:0004737 metanephric collecting duct - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + Wikipedia-abduced @@ -350864,20 +350726,20 @@ - + Juxtaglomerular apparatus of the mature vertebrate kidney, or metanephros. juxtaglomerular apparatus of metanephros UBERON:0004738 metanephric juxtaglomerular apparatus - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -350911,7 +350773,7 @@ - + The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment. a glomus differs from a glomerulus in that each vascular glomus services several tubules Paired highly vascularized portion of the pronephros. Left and right glomeruli are fused at the midline. Begins to function between 40 and 48hpf. Drummond, 2000.[TAO] @@ -350934,14 +350796,14 @@ UBERON:0004739 pronephric glomerulus - + - + XAO @@ -351233,15 +351095,15 @@ - + - - + + The dentary is a dermal bone that forms the antero-lateral part of the lower jaw in fishes and amphibians, extending to the whole lower jaw in mammals[VHOG,modified]. Dermal bone that is usually the anteriormost bone of the lower jaw, and that articulates with the angular, or anguloarticular bone, posteriorly, and carries part of the mandibular sensory canal and pore openings of the mandibular sensory canal on its lateral surface. The dentary is a paired bone.[TAO] Ossified element of intramembranous origin that invests the lateral margin of Meckel's cartilage thereby forming the lateral side of the mandible in anurans and salamanders (Duellman & Trueb, 1994:293). In caecilians, the dentary is part of a compound bone termed the pseudodentary.[AAO] @@ -351264,15 +351126,15 @@ dentary - + - + - + @@ -351285,7 +351147,7 @@ - + mandibular series ISBN:0073040584 ZFA @@ -351293,13 +351155,13 @@ - + EHDAA2 - + EHDAA2-modified @@ -351550,8 +351412,8 @@ - - + + TODO - resolve part_of relationships Dermal and endochondral compound bone that results from the fusion of the dermal angular and the endochondral articular and forms the posterior part of the lower jaw. It articulates with the dentary anteriorly and with the retroarticular postero-medially. The anguloarticular is paired.[TAO] Endochondral ossification of the posterior articular part of Meckel's cartilage.[AAO] @@ -351580,11 +351442,11 @@ articular/anguloarticular https://github.com/obophenotype/uberon/issues/98 - + - + @@ -351603,14 +351465,14 @@ - + ZFA-modifed cjm - + ZFA @@ -351735,9 +351597,9 @@ - - - + + + A tooth- or denticle-covered plate which is attached to the sphenoid stem[Palaeos]. Azygous, dermal bone of intramembranous origin that underlies the ventral surface of the braincase in anurans and salamanders. In caecilians, the parasphenoid and other bones are fused to form the Os basale.[AAO] Dermal bone that forms part of the base of the skull and the lateral walls of the braincase through its ascending processes. It may articulate with the vomer anteriorly, the prootics and exoccipitals laterally, and the basioccipital posteriorly. The parasphenoid is an elongate median bone.[TAO] @@ -351754,34 +351616,34 @@ UBERON:0004745 parasphenoid - + - + - + - + ZFA - + ZFA - + ZFA-modified @@ -352264,9 +352126,9 @@ - - - + + + Paired element that articulates anterioly with the basihyal and posteriorly with the ceratohyal hypohyals.[AAO] Replacement bone that is bilaterally paired and articulates with the anterior ceratohyal posteriorly.[TAO] relationship loss: part_of hyoid apparatus skeleton (AAO:0000682)[AAO] @@ -352277,15 +352139,15 @@ UBERON:0004751 hypohyal bone - + - + - + @@ -352298,19 +352160,19 @@ - + AAO - + TAO - + TAO @@ -352354,8 +352216,8 @@ - - + + The dorsal component of the mandibular arch. Column of catilage, remnant in the adult of the larval palatoquadrate cartilage, that is located lateral or antero-lateral to the auditory capsule.[AAO] AAO:0000379 @@ -352369,11 +352231,11 @@ UBERON:0004752 palatoquadrate cartilage - + - + @@ -352386,13 +352248,13 @@ - + AAO - + ZFA @@ -352442,7 +352304,7 @@ - + Skeletal element that consists of the scapula and the coracoid[VSAO, modified]. todo - decide whether to create separate classes for cartilage & ossified. Wikipedia considers this absent in Therians, but if considered as a grouping of scapula and coracoid then it would be present Fused, ossified portions of the scapula, procoracoid, and coracoid.[AAO] @@ -352465,14 +352327,14 @@ UBERON:0004753 scapulocoracoid - + - + VSAO @@ -352644,7 +352506,7 @@ - + A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO] EMAPA:37744 @@ -352657,7 +352519,7 @@ Four classes of mineralized tissues are found in vertebrates: bone, cartilage, dentine, and enamel. We think of cartilage and bone as skeletal tissues and of enamel and dentine as dental tissues, but enamel and dentine arose evolutionarily together with bone as skeletal tissues in the dermal skeleton (exoskeleton) of early vertebrates. Scales and teeth of sharks are examples of dermal skeletal elements that are still composed of the three ancient components-enamel, dentine, and bone. Cartilage, on the other hand, provided the basis for the second vertebrate skeletal system, the endoskeleton (Smith and Hall, 1990; Hall, 1998a,b). some invertebrate skeletal tissues have surprisingly bone-like features. Examples include chondrocytes interconnected by cell processes in cephalopod cartilages (Cole and Hall, 2004a,b), and the calcium phosphate layer in the shells of brachiopods (Rodland et al., 2003). However, neither bone nor mineralized cartilage have been found in invertebrates. Editors notes: TODO - develops_from skeletal tissue - + @@ -352670,7 +352532,7 @@ - + 2012-08-14 VSAO:0000015 VSAO @@ -353002,7 +352864,7 @@ - + The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP]. in contrast to chondrocranium, this structure is entirely cartiliginous. In Chondricthyes this is the same as the neurocranium. FMA:76621 is an undefined fetal structure, so we assume the correct placement is here. Note that this is distinct from MA:0000317 which is the uberon:neurocranium (the part of the cranium that encloses the brain) AAO:0000094 @@ -353022,7 +352884,7 @@ UBERON:0004761 cartilaginous neurocranium - + @@ -353035,7 +352897,7 @@ - + PMC1571569 @@ -353202,7 +353064,7 @@ - + Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. Organ entity that is typically involved in mechanical support and may have different skeletal tissue compositions at different stages.[VSAO] Organ entity that may have different tissue compositions at different stages and is typically involved in mechanical support.[TAO] @@ -353217,14 +353079,14 @@ skeletal element - + - + VSAO @@ -353456,7 +353318,7 @@ - + @@ -353488,14 +353350,14 @@ UBERON:0004770 articular system - + - + FMA @@ -353670,7 +353532,7 @@ - + @@ -353694,7 +353556,7 @@ eyelid tarsus - + @@ -353707,7 +353569,7 @@ - + cjm @@ -354262,7 +354124,7 @@ - + A lamina propria that is part of a respiratory system [Automatically generated definition]. EMAPA:37576 MA:0001821 @@ -354276,14 +354138,14 @@ UBERON:0004779 respiratory system lamina propria - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -354359,7 +354221,7 @@ - + A lamina propria that is part of a gastrointestinal system. MA:0001899 NCIT:C49299 @@ -354367,14 +354229,14 @@ UBERON:0004780 gastrointestinal system lamina propria - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -354408,7 +354270,7 @@ - + A lamina propria that is part of a gallbladder [Automatically generated definition]. EMAPA:35371 FMA:278594 @@ -354426,14 +354288,14 @@ UBERON:0004781 gallbladder lamina propria - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -355022,10 +354884,10 @@ - - - - + + + + A mucosa that is part of a gastrointestinal system. BTO:0000546 BTO:0005568 @@ -355040,44 +354902,44 @@ The gut mucosa of amphioxus has insulin-secreting cells. http://www.ncbi.nlm.nih.gov/pubmed/16417468 gastrointestinal system mucosa - + - + - + - + - + PMID:16417468 - + PMID:16417468 - + PMID:16417468 - + BTO-modified @@ -355465,12 +355327,20 @@ - + + + + - + + + + + + @@ -355492,16 +355362,6 @@ thymus trabecula - - - - - - - - - MA - @@ -358033,8 +357893,8 @@ - - + + @@ -358065,11 +357925,11 @@ pulmonary alveolus epithelium - + - + @@ -358082,13 +357942,13 @@ - + FMA - + FMA @@ -358978,7 +358838,7 @@ - + An endothelium of artery that is part of a respiratory system [Automatically generated definition]. EMAPA:37566 @@ -358998,14 +358858,14 @@ respiratory system arterial endothelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -360076,9 +359936,9 @@ - - - + + + Dermal bone that covers the otic region and may articulate with its antimere medially, with the frontal bone anteriorly, the pterotic laterally, the supraoccipital medio-posteriorly, and the epiotic and extrascapula latero-posteriorly. The parietal is a paired bone.[TAO]. Dermal bone that covers the otic region and may articulate with its antimere medially, with the frontal bone anteriorly, the pterotic laterally, the supraoccipital medio-posteriorly, and the epiotic and extrascapula latero-posteriorly. The parietal is a paired bone.[TAO] relationship loss: overlaps frontal-parietal joint (TAO:0005255)[TAO] @@ -360097,34 +359957,34 @@ UBERON:0004865 actinopterygian parietal bone - + - + - + - + ZFA - + ZFA - + PMID:11523816 @@ -360228,9 +360088,9 @@ - - - + + + Dermal bone that bears part of the supraorbital canal and usually covers a large area of the neurocranium occupying part of the ethmoidal, orbitosphenoid, and otic regions. Commonly, the frontal bone articulates with its antimere medially, with lateral ethmoid, orbitosphenoid and pterosphenoid ventrolaterally, with supraorbital bone(s), autosphenotic and pterotic laterally, and with parietal posteriorly.[TAO]. Dermal bone that bears part of the supraorbital canal and usually covers a large area of the neurocranium occupying part of the ethmoidal, orbitosphenoid, and otic regions. Commonly, the frontal bone articulates with its antimere medially, with lateral ethmoid, orbitosphenoid and pterosphenoid ventrolaterally, with supraorbital bone(s), autosphenotic and pterotic laterally, and with parietal posteriorly.[TAO] relationship loss: overlaps frontal-parietal joint (TAO:0005255)[TAO] @@ -360249,15 +360109,15 @@ UBERON:0004866 actinopterygian frontal bone - + - + - + @@ -360270,19 +360130,19 @@ - + ZFA - + PMID:11523816 - + ZFA-modified @@ -360485,7 +360345,7 @@ - + A part of the epithalamus present in some animal species. The eye may be photoreceptive and is usually associated with the pineal gland, regulating circadian rhythmicity and hormone production for thermoregulation. The parietal eye is a part of the epithalamus, which can be divided into two major parts; the epiphysis (the pineal organ, or pineal gland if mostly endocrine) and the parietal organ (often called the parietal eye, or third eye if it is photoreceptive). It arises as an anterior evagination of the pineal organ or as a separate outgrowth of the roof of the diencephalon. In some species, it protrudes through the skull.[4] The parietal eye uses a different biochemical method of detecting light than rod cells or cone cells in a normal vertebrate eye[WP]. @@ -360495,7 +360355,7 @@ UBERON:0004869 parietal organ - + @@ -360508,7 +360368,7 @@ - + cjm @@ -360705,7 +360565,7 @@ - + @@ -360727,14 +360587,14 @@ splanchnopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png - + - + EHDAA2 @@ -360762,7 +360622,7 @@ - + @@ -360784,14 +360644,14 @@ somatopleure http://upload.wikimedia.org/wikipedia/commons/2/28/Gray16.png - + - + EHDAA2 @@ -360856,9 +360716,9 @@ - - - + + + @@ -360878,34 +360738,34 @@ urogenital fold - + - + - + - + EHDAA2 - + Wikipedia - + EHDAA2 @@ -362133,7 +361993,7 @@ - + The fetal urogenital sinus (from which the prostate derives) is a simple cylinder of stratified basal epithelium, surrounded by mesenchyme and positioned between the embryonic bladder and pelvic urethra. we follow EHDAA2 in dividing the UGS into epithelium and lumen EHDAA2:0004061 @@ -362143,14 +362003,14 @@ UBERON:0004902 urogenital sinus epithelium - + - + EHDAA2 @@ -362653,8 +362513,8 @@ - - + + EHDAA2:0000171 EMAPA:16561 EMAPA_RETIRED:16565 @@ -362664,11 +362524,11 @@ biliary bud http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png - + - + @@ -362681,13 +362541,13 @@ - + EHDAA2 - + EHDAA2-modified @@ -363038,8 +362898,8 @@ - - + + A urethral sphincter muscle which constricts the internal urethral orifice. It is the junction of the urethra with the urinary bladder. The muscle is made of smooth muscle, so therefore it is under involuntary control. It is kept tonically contracted by the sympathetic nervous system and during micturition, is relaxed via the parasympathetic nervous system. This is the primary muscle for preventing the release of urine[WP]. FMA:45769 SCTID:277856008 @@ -363057,25 +362917,25 @@ internal urethral sphincter http://upload.wikimedia.org/wikipedia/commons/b/ba/Gray407.png - + - + - + Sympathetics from L1-L2 through lumbar splanchnic and hypogastric/pelvic plexus dbpedia - + Sympathetics from L1-L2 through lumbar splanchnic and hypogastric/pelvic plexus dbpedia @@ -363135,8 +362995,8 @@ - - + + EMAPA:37790 FMA:85274 MA:0002401 @@ -363158,25 +363018,25 @@ http://upload.wikimedia.org/wikipedia/commons/7/70/Gray1166.png http://upload.wikimedia.org/wikipedia/commons/d/d7/Gray1142.png - + - + - + Junction of the inferior rami of the pubis and ischium to the extent of 1.25 to 2 cm. dbpedia - + Junction of the inferior rami of the pubis and ischium to the extent of 1.25 to 2 cm. dbpedia @@ -363267,12 +363127,6 @@ - - - - - - @@ -363332,7 +363186,7 @@ - + @@ -363384,14 +363238,14 @@ postnatal subventricular zone - + - + GO @@ -364740,7 +364594,7 @@ - + The submucous layer of the wall of the urinary bladder. BTO:0002117 @@ -364758,14 +364612,14 @@ submucosa of urinary bladder - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -365517,7 +365371,7 @@ - + A mucosa that is part of a ureter [Automatically generated definition]. FMA:15894 SCTID:40476001 @@ -365537,14 +365391,14 @@ UBERON:0004980 mucosa of ureter - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -368073,7 +367927,7 @@ - + A mucosa that is part of a pyloric antrum [Automatically generated definition]. BTO:0004107 FMA:17055 @@ -368105,14 +367959,14 @@ UBERON:0004997 mucosa of pyloric antrum - + - + BTO @@ -375792,7 +375646,7 @@ - + @@ -375815,7 +375669,7 @@ gizzard - + @@ -375828,7 +375682,7 @@ - + Wikipedia @@ -375940,7 +375794,7 @@ - + A nerve cord in the dorsal mid-line that is the most prominent nerve cord. BTO:0002329 @@ -375950,14 +375804,14 @@ UBERON:0005054 primary dorsal nerve cord - + - + http://tolweb.org/Chordata/2499 @@ -376326,30 +376180,30 @@ - - + + Missing definition for term UBERON:0005063. Please replace it using linked reference. UBERON:0005063 left ventricular compact myocardium - + - + - + GO - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -376377,19 +376231,19 @@ - + Missing definition for term UBERON:0005064. Please replace it using linked reference. UBERON:0005064 left ventricular trabecular myocardium - + - + GO @@ -376416,30 +376270,30 @@ - - + + Missing definition for term UBERON:0005065. Please replace it using linked reference. UBERON:0005065 right ventricular compact myocardium - + - + - + GO - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -376467,19 +376321,19 @@ - + Missing definition for term UBERON:0005066. Please replace it using linked reference. UBERON:0005066 right ventricular trabecular myocardium - + - + GO @@ -376762,7 +376616,7 @@ - + @@ -376787,14 +376641,14 @@ UBERON:0005075 forebrain-midbrain boundary - + - + definitional @@ -377216,7 +377070,7 @@ - + @@ -377234,14 +377088,14 @@ UBERON:0005086 hair follicle placode - + - + Wikipathways:WP2062 @@ -377299,7 +377153,7 @@ - + @@ -377322,7 +377176,7 @@ UBERON:0005087 tooth placode - + @@ -377335,7 +377189,7 @@ - + check for other species Wikipedia:Tooth_development @@ -377409,7 +377263,7 @@ - + @@ -377421,7 +377275,7 @@ UBERON:0005088 sebaceous gland placode - + @@ -377434,7 +377288,7 @@ - + Wikipathways:WP2062 @@ -377462,7 +377316,7 @@ - + @@ -377474,7 +377328,7 @@ UBERON:0005089 sweat gland placode - + @@ -377487,7 +377341,7 @@ - + Wikipathways:WP2062 @@ -377719,21 +377573,21 @@ - + Missing definition for term UBERON:0005095. Please replace it using linked reference. class added for consistency with GO - consider merging with kidney mesenchyme. kidney anlage UBERON:0005095 kidney rudiment - + - + GO @@ -377848,7 +377702,7 @@ - + The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct[GO]. BTO:0004539 @@ -377865,14 +377719,14 @@ renal connecting tubule http://upload.wikimedia.org/wikipedia/commons/0/02/Gray1128.png - + - + Wikipedia @@ -378270,7 +378124,7 @@ - + A metanephric nephron is the functional unit of the metanephros[GO]. The primitive form of the vertebrate nephron consists of a vascular filtration surface overlain with podocytes, a specialized coelomic cavity to receive the ultrafiltrate, and a tubule for modification to final urine. Although previously thought to be unique to the vertebrates, this design is now known to be widespread among invertebrates, including most of the protochordates, and especially their larvae.[well established][VHOG] UBERON:0005142 @@ -378278,14 +378132,14 @@ UBERON:0005110 metanephric nephron - + - + Bgee:AN @@ -378356,19 +378210,19 @@ - + EHDAA2:0001140 UBERON:0005113 metanephric cortex mesenchyme - + - + EHDAA2 @@ -378390,19 +378244,19 @@ - + The metanephric ascending thin limb is a segment of a nephron tubule in the metanephros lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent[GO]. UBERON:0005114 metanephric ascending thin limb - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378429,31 +378283,31 @@ - - + + The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex[GO]. UBERON:0005115 metanephric cortical collecting duct - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378481,19 +378335,19 @@ - + It extends to the tip of the metanephric loop of Henle[GO]. UBERON:0005116 metanephric descending thin limb - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378522,20 +378376,20 @@ - + The metanephric distal convoluted tubule is a portion of the metanephric nephron tubule that connects the metanephric loop of Henle to the collecting duct[GO]. VHOG:0001569 UBERON:0005117 metanephric distal convoluted tubule - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378564,31 +378418,31 @@ - - + + The metanephric early distal convoluted tubule contains metanephric DCT cells and is vasopressin-insensitive[GO]. UBERON:0005118 metanephric early distal convoluted tubule - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378615,19 +378469,19 @@ - + The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus[GO]. UBERON:0005119 metanephric glomerular mesangium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378656,31 +378510,31 @@ - - + + The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive[GO]. UBERON:0005120 metanephric late distal convoluted tubule - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378742,19 +378596,19 @@ - + The metanephric macula densa is an area of specialized cells in the distal tubule of the metanephros that makes contact with the vascular pole of the glomerulus[GO]. UBERON:0005122 metanephric macula densa - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378782,19 +378636,19 @@ - + The metanephric prebend segment is a part of the metanephric descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability[GO]. UBERON:0005123 metanephric prebend segment - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378823,20 +378677,20 @@ - + The metanephric proximal convoluted tubule is the most proximal portion of the metanephric proximal tubule and extends from the metanephric glomerular capsule to the metanephric proximal straight tubule[GO]. VHOG:0001570 UBERON:0005124 metanephric proximal convoluted tubule - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378865,20 +378719,20 @@ - + The metanephric proximal straight tubule is the part of the metanephric descending limb that extends from the metanephric proximal convoluted tubule to the metanephric descending thin tubule[GO]. TODO - place mammalian xrefs here rather than at parent UBERON:0005125 metanephric proximal straight tubule - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -378906,19 +378760,19 @@ - + The S1 portion is the initial portion of the metanephric proximal convoluted tubule and is responsible for avid reabsorption of water and solutes[GO]. UBERON:0005126 metanephric S1 - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379089,20 +378943,20 @@ - + The metanephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the metanephric glomerulus[GO]. UBERON:0005143 UBERON:0005133 metanephric glomerulus vasculature - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379131,19 +378985,19 @@ - + The metanephric nephron epithelium is a tissue that covers the surface of a nephron in the metanephros[GO]. UBERON:0005134 metanephric nephron epithelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379172,19 +379026,19 @@ - + A metanephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the metanephros[GO]. UBERON:0005135 metanephric glomerular epithelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379213,19 +379067,19 @@ - + The metanephric glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus of the metanephros[GO]. UBERON:0005136 metanephric glomerular endothelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379388,31 +379242,31 @@ - - + + This process pertains to the initial formation of a structure from unspecified parts[GO]. UBERON:0005144 metanephric glomerular capillary - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379476,21 +379330,21 @@ - + A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros[GO]. UBERON:0005128 UBERON:0005152 UBERON:0005146 metanephric nephron tubule - + - + ISBN:9780878932504 @@ -379519,7 +379373,7 @@ - + @@ -379534,14 +379388,14 @@ UBERON:0005147 metanephric renal vesicle - + - + EHDAA2 @@ -379568,19 +379422,19 @@ - + The metanephric S-shaped body is the successor of the metanephric comma-shaped body that contributes to the morphogenesis of a nephron in the metanephros[GO]. UBERON:0005148 metanephric S-shaped body - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -379648,20 +379502,20 @@ - + The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology[GO]. UBERON:0005131 UBERON:0005151 metanephric proximal tubule - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -380010,7 +379864,7 @@ - + Pelvic spurs are the externally visible portion of the vestigial remnants of legs found on each side of the vent in primitive snakes, such as boas and pythons. The remnants of a pelvis and femur, which have no connection with the spine, simply 'float' in the muscle mass. The femur protrudes from the snake's body and is covered by a corneal spur, which resembles a claw. Males' spurs are generally longer and more pointed than females', and are used for clasping and tickling during courtship and mating, as well as combat with other males in some species. this class refers to the external portion and its corneal covering rather than the combined pelvis plus femur. Wikipedia:Pelvic_spur @@ -380019,14 +379873,14 @@ UBERON:0005161 pelvic spur - + - + Wikipedia @@ -381222,7 +381076,7 @@ - + @@ -381244,14 +381098,14 @@ deferent duct artery - + - + Wikipedia @@ -381301,7 +381155,7 @@ - + One of: anterior or posterior ethmoidal arteries. EMAPA:37081 MA:0001949 @@ -381314,7 +381168,7 @@ ethmoidal artery - + @@ -381327,7 +381181,7 @@ - + FMA-abduced @@ -381455,7 +381309,7 @@ - + @@ -381479,14 +381333,14 @@ spleen germinal center - + - + CL:tm @@ -381527,8 +381381,8 @@ - - + + TODO - check EHDAA:3778 EMAPA:16990 @@ -381539,11 +381393,11 @@ UBERON:0005197 segmental spinal nerve - + - + @@ -381556,13 +381410,13 @@ - + EHDAA2 - + EHDAA2 @@ -381636,7 +381490,7 @@ - + A lactiferous gland that is located in the thoracic region/breast. Most primates have one pair of mammary glands, which are thoracic. @@ -381655,14 +381509,14 @@ thoracic mammary gland - + - + BTO @@ -381715,37 +381569,35 @@ - + + + + - - + + + + + + + A macula densa that is part of an ascending limb of loop of Henle [Automatically generated definition]. TODO - unify terminology - check DST = TAL? Note EMAPA class appears to refer to this segment MA:0002604 UBERON:0005202 distal straight tubule macula densa - - - - - + - - MA - - - - - + MA @@ -382104,7 +381956,7 @@ - + @@ -382125,14 +381977,14 @@ UBERON:0005211 renal medulla interstitium - + - + MA @@ -382271,13 +382123,21 @@ - + + + + - - + + + + + + + A portion of interstitial tissue that is part of a outer medulla of kidney [Automatically generated definition]. EMAPA:28337 MA:0002621 @@ -382286,24 +382146,14 @@ UBERON:0005213 outer renal medulla interstitium - - - - - + - - MA - - - - - + MA @@ -382334,13 +382184,21 @@ - + + + + - - + + + + + + + A portion of interstitial tissue that is part of a inner medulla of kidney [Automatically generated definition]. EMAPA:28364 MA:0002620 @@ -382350,24 +382208,14 @@ UBERON:0005214 inner renal medulla interstitium - - - - - + - - MA - - - - - + MA @@ -382893,7 +382741,7 @@ - + An epithelium that is part of a hindlimb stylopod [Automatically generated definition]. EHDAA2:0002131 EMAPA:17500 @@ -382901,14 +382749,14 @@ UBERON:0005225 upper leg epithelium - + - + EHDAA2 @@ -382941,7 +382789,7 @@ - + An epithelium that is part of a toe [Automatically generated definition]. EMAPA:32946 VHOG:0001031 @@ -382951,7 +382799,7 @@ UBERON:0005226 pedal digit epithelium - + @@ -382964,7 +382812,7 @@ - + EHDAA2 @@ -383011,7 +382859,7 @@ - + An epithelium that is part of a finger [Automatically generated definition]. EHDAA2:0000406 EMAPA:32647 @@ -383022,14 +382870,14 @@ UBERON:0005227 manual digit epithelium - + - + EHDAA2 @@ -383076,7 +382924,7 @@ - + An epithelium that is part of a forelimb stylopod [Automatically generated definition]. EHDAA2:0002113 EMAPA:17425 @@ -383084,14 +382932,14 @@ UBERON:0005228 upper arm epithelium - + - + EHDAA2 @@ -383124,7 +382972,7 @@ - + An epithelium that is part of a lower leg [Automatically generated definition]. EHDAA2:0001031 EMAPA:17497 @@ -383132,14 +382980,14 @@ UBERON:0005229 lower leg epithelium - + - + EHDAA2 @@ -383929,7 +383777,7 @@ - + @@ -383950,14 +383798,14 @@ UBERON:0005252 lesser sac cavity - + - + EHDAA2 @@ -384027,7 +383875,7 @@ - + Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head. (Source: BioGlossary, www.Biology-Text.com)[TAO] EFO:0003492 @@ -384048,14 +383896,14 @@ head mesenchyme - + - + EHDAA2 @@ -384155,7 +384003,7 @@ - + Mesenchyme that is part of a developing toe [Automatically generated definition]. EMAPA:32947 VHOG:0000463 @@ -384167,14 +384015,14 @@ UBERON:0005255 pedal digit mesenchyme - + - + EHDAA2 @@ -384238,7 +384086,7 @@ - + Mesenchyme that is part of a developing trunk. EFO:0003485 EHDAA2:0002092 @@ -384253,14 +384101,14 @@ trunk mesenchyme - + - + EHDAA2 @@ -384644,7 +384492,7 @@ - + @@ -384667,14 +384515,14 @@ renal cortex artery - + - + MA @@ -384720,7 +384568,7 @@ - + @@ -384742,14 +384590,14 @@ renal cortex vein - + - + MA @@ -384780,13 +384628,21 @@ - + + + + - - + + + + + + + @@ -384805,24 +384661,14 @@ UBERON:0005270 renal cortex interstitium - - - - - + - - MA - - - - - + MA @@ -384856,7 +384702,7 @@ - + The part of the renal cortex nearest to the medulla. EMAPA:37623 @@ -384870,14 +384716,14 @@ juxtamedullary cortex - + - + FMA KUPO @@ -384924,7 +384770,7 @@ - + The tiny blood vessels that receive blood from the efferent arterioles of the glomerulus, and interact with superficial cortical nephrons allowing reabsorption and secretion between blood and the inner lumen of the nephron; peritubular capillaries are situated around the tubule and are at low pressure. EMAPA:36558 @@ -384935,14 +384781,14 @@ peritubular capillary - + - + Wikipedia @@ -385001,20 +384847,20 @@ - + EMAPA:37509 MA:0002709 UBERON:0005274 proximal nail bed - + - + MA @@ -385364,7 +385210,7 @@ - + @@ -385392,14 +385238,14 @@ tela choroidea - + - + FMA @@ -385762,7 +385608,7 @@ - + The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. The posterior of the two brain vesicles formed by specialization of the rhombencephalon in the developing embryo, it comprises the medulla oblongata. [TFD][VHOG] @@ -385786,14 +385632,14 @@ myelencephalon http://upload.wikimedia.org/wikipedia/commons/5/54/EmbryonicBrain.svg - + - + definitional @@ -386199,7 +386045,7 @@ - + The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP]. TODO - check primary vs testis EHDAA2:0002011 @@ -386215,14 +386061,14 @@ testis sex cord - + - + Bgee:AN @@ -386610,8 +386456,8 @@ - - + + @@ -386639,24 +386485,24 @@ submucous nerve plexus - + - + - + FMA-modified - + FMA-modified @@ -386948,12 +386794,20 @@ - + + + + - + + + + + + The pronephric nephron tubule is an epithelial tube that is part of the pronephric nephron and connects the filtration unit (glomerulus or glomus) of the pronephros to the pronephric duct[GO]. Bilaterally paired tubes connecting the pronephric glomeruli to the pronephric ducts. In zebrafish and other teleosts, the pronephric nephron and tubules form after the pronephric duct, connecting to the anterior-most tip of the pronephric ducts. Drummond, 2000.[TAO] @@ -386965,16 +386819,6 @@ UBERON:0005310 pronephric nephron tubule - - - - - - - - - GO - @@ -387015,8 +386859,8 @@ - - + + The mammary placode is a transient lens shaped structure that will give rise to the mammary bud proper[GO]. TODO develops_from in mouse, five pairs of symmetrically positioned mammary placodes (three thoracic and two inguinal) form at reproducible locations along the mammary line at E11.5; the individual pairs develop asynchronously and in a distinct order; pair 3 is first, followed by pair 4, then by pairs 1 and 5 (which develop together), and finally by pair 2; the orientation of placodal cells is not uniform, suggesting that placodes are formed by migration of cells from the mammary line; between E11.5 and E12.5, each mammary placode expands and invaginates into the underlying mesenchyme to form an early bulb-shaped mammary bud[MP] @@ -387025,11 +386869,11 @@ UBERON:0005311 mammary placode - + - + @@ -387042,13 +386886,13 @@ - + PMID:20484386 - + Stedmans @@ -387275,21 +387119,21 @@ - + The collecting duct is the final common path through which urine flows before entering the ureter and then emptying into the bladder[GO]. AAO:0010390 XAO:0000151 UBERON:0005319 mesonephric collecting duct - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -387391,7 +387235,7 @@ - + A nephron that is part of a mesonephros. The structure that is the basic functional unit of the kidney.[AAO] AAO:0010387 @@ -387402,14 +387246,14 @@ UBERON:0005322 mesonephric nephron - + - + XAO @@ -387491,19 +387335,19 @@ - + The mesonephric macula densa is an area of specialized cells in the distal tubule of the mesonephros that makes contact with the vascular pole of the glomerulus[GO]. UBERON:0005324 mesonephric macula densa - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -387605,19 +387449,19 @@ - + The mesonephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the mesonephric glomerulus[GO]. UBERON:0005326 mesonephric glomerulus vasculature - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -387646,19 +387490,19 @@ - + A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros[GO]. UBERON:0005327 mesonephric glomerular epithelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -387747,19 +387591,19 @@ - + The mesonephric nephron epithelium is a tissue that covers the surface of a nephron in the mesonephros[GO]. UBERON:0005330 mesonephric nephron epithelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -387788,7 +387632,7 @@ - + @@ -387802,14 +387646,14 @@ UBERON:0005331 mesonephric renal vesicle - + - + ZFA @@ -387961,7 +387805,7 @@ - + The chorioallantoic membrane is a vascular membrane found in eggs of some amniotes, such as birds and reptiles. It is formed by the fusion of the mesodermal layers of two developmental structures: the allantois and the chorion. Three different layers compose the chorioallantoic membrane; these are called the chorionic epithelium, the mesenchyme and the allantoic epithelium. Blood capillaries and sinuses are found between epithelial cells of the chorionic layer, allowing close contact (within 0.2 N<m) with air found in pores of the shell membrane of the egg. As a result, the chorioallantoic membrane allows exchange of gases, such as oxygen, to developing embryos. During embryonic development of birds, the chorioallantoic membrane also plays an essential role in bone formation by transporting calcium into the embryo from the eggshell. Chorioalloantoic membranes from developing chicken eggs are routinely used in biological and biomedical research to investigate development, angiogenesis, tumors, and to propagate and investigate viruses or helminths. respiratory membrane @@ -387975,14 +387819,14 @@ chorioallantoic membrane https://upload.wikimedia.org/wikipedia/commons/f/f8/Smallpox_CAM.png - + - + Hymans @@ -388029,7 +387873,7 @@ - + @@ -388052,14 +387896,14 @@ capillary layer of choroid - + - + overlaps via basement membrane. consider also adjacency Wikipedia:Bruch's_membrane @@ -388325,7 +388169,7 @@ - + The outer neural tube region in which post-mitotic neuroblasts migrate along radial glia to form the adult cortical layers[MP]. A single stem cell in the ventricular layer can give rise to neurons (and glial cells) in any of the cortical layers (Walsh and Cepko 1988)[NCBIBook:NBK10047] in humans develops into cortical layers II-VI @@ -388346,14 +388190,14 @@ cortical plate - + - + NCBIBook:NBK10047 @@ -389521,8 +389365,8 @@ - - + + A pouch of ectoderm that grows out from the upper surface of the embryonic stomodeum and gives rise to the anterior and intermediate lobes of the pituitary gland[MP]. In embryogenesis, Rathke's pouch is a depression in the roof of the developing mouth in front of the buccopharyngeal membrane. It gives rise to the anterior pituitary (adenohypophysis), a part of the endocrine system[WP]. A depression that forms in the roof of the mouth of an embryo, anterior to the buccopharyngeal membrane. The walls of the diverticulum develop into the anterior lobe of the pituitary gland. [TFD][VHOG] @@ -389560,11 +389404,11 @@ Rathke's pouch - + - + @@ -389577,13 +389421,13 @@ - + MP - + NCBIBook:NBK53175 @@ -390268,8 +390112,8 @@ - - + + The large group of sensory neuron cell bodies, anterior to the jugular vein, associated with the vagus nerve (tenth cranial nerve). These (the epibranchial placodes) are focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches in all vertebrates, and they produce the neuroblasts which migrate and condense to form the distal cranial ganglia: the geniculate, petrosal and nodose ganglia. (...) The one substantial difference between the vertebrate pharyngeal arches and those of the protochordates is the presence of the epibranchial placodes but the evolution of these structures was undoubtedly driven by the endoderm.[well established][VHOG] @@ -390302,24 +390146,24 @@ inferior vagus X ganglion - + - + - + EHDAA2 - + EHDAA2 @@ -390968,7 +390812,7 @@ - + @@ -390999,14 +390843,14 @@ spinal cord dorsal column - + - + Wikipedia @@ -391064,7 +390908,7 @@ - + @@ -391085,14 +390929,14 @@ spinal cord lateral column - + - + checkme @@ -391523,7 +391367,7 @@ - + @@ -391566,14 +391410,14 @@ dorsal striatum - + - + NIFSTD @@ -391661,7 +391505,7 @@ - + @@ -391714,14 +391558,14 @@ caudate-putamen - + - + MA @@ -392048,7 +391892,7 @@ - + One of the small globular masses of dense neuropil in the olfactory bulb, containing the first synapse in the olfactory pathway[BTO]. Multi-tissue structure part of the olfactory bulb that is roughly spheroidal and encircled by olfactory sensory neuron axons that formed an anatomically distinct stalk connected to the olfactory nerve[ZFA]. UBERON:0011916 @@ -392062,14 +391906,14 @@ UBERON:0005387 olfactory glomerulus - + - + ZFA @@ -392201,7 +392045,7 @@ - + The most superficial layer of the neocortex characterized by a paucity of cell bodies. ABA:CTX1 BTO:0004906 @@ -392230,14 +392074,14 @@ UBERON:0005390 cortical layer I - + - + NBK10047 @@ -392340,7 +392184,7 @@ - + Layer of neocortex lying just deep to molecular layer characterized by numerous small cell bodies. ABA:CTX2 EMAPA:35256 @@ -392368,14 +392212,14 @@ UBERON:0005391 cortical layer II - + - + BRAINSPAN @@ -392465,7 +392309,7 @@ - + Layer of neocortex lying deep to the external granule cell layer defined cytoarchitecturally by numerous small pyramidal neurons. ABA:CTX3 EMAPA:35257 @@ -392495,14 +392339,14 @@ UBERON:0005392 cortical layer III - + - + BRAINSPAN @@ -392623,7 +392467,7 @@ - + Layer of neocortex lying deep to the external pyramidal cell layer defined cytoarchitecturally by the presence of numerous small cells. ... Relatively undeveloped in some mammals such as the tenrec. @@ -392652,14 +392496,14 @@ UBERON:0005393 cortical layer IV - + - + BRAINSPAN @@ -392779,7 +392623,7 @@ - + Layer of neocortex lying deep to the internal granule cell layer (layer 4) defined cytoarchitecturally by the predominance of large pyramidal cell bodies. ABA:CTX5 EMAPA:35259 @@ -392814,14 +392658,14 @@ UBERON:0005394 cortical layer V - + - + BRAINSPAN @@ -393491,14 +393335,14 @@ - + - + @@ -393525,11 +393369,11 @@ philtrum https://github.com/obophenotype/uberon/pull/2691 - + - + @@ -393542,13 +393386,13 @@ - + EMAPA - + Wikipedia @@ -393590,7 +393434,7 @@ - + @@ -393623,14 +393467,14 @@ ventral striatum - + - + MA @@ -394154,7 +393998,7 @@ - + An otic capsule endochondral element that is composed primarily of cartilage tissue. Bilaterally paired cartilage encasing the semicircular canals of the inner ear.[TAO] relationship type change: overlaps neurocranium (TAO:0001580) CHANGED TO: develops_from neurocranium (UBERON:0001703)[TAO] @@ -394173,14 +394017,14 @@ cartilaginous otic capsule - + - + EHDAA2 @@ -394246,7 +394090,7 @@ - + @@ -394262,14 +394106,14 @@ bony otic capsule - + - + EHDAA2 @@ -394292,8 +394136,8 @@ - - + + Groove that is in the developing ventral optic cup and through which blood vessels pass to the enclosed mesenchyme[ZFA]. a ventral fissure in the developing optic cup through which blood vessels pass to the enclosed mesenchyme[Free online medical dictionary]. A break in the continuity of the optic cup where the two sides of the cup meet.[AAO] @@ -394322,11 +394166,11 @@ optic fissure http://upload.wikimedia.org/wikipedia/commons/9/98/Gray865.png - + - + @@ -394339,13 +394183,13 @@ - + EHDAA2 - + cjm @@ -394997,7 +394841,7 @@ - + An apical ectodermal ridge that is part of a pectoral appendage bud. An ectodermal thickening at the end of the forelimb bud in the developing embryo. [TFD][VHOG] Apical ectodermal ridge that is part of the pectoral fin bud.[TAO] @@ -395023,14 +394867,14 @@ pectoral appendage apical ectodermal ridge - + - + EHDAA2 @@ -395147,7 +394991,7 @@ - + An apical ectodermal ridge that is part of a pelvic appendage bud. An ectodermal thickening at the end of the hindlimb bud in the developing embryo. [TFD][VHOG] Apical ectodermal ridge that is part of the pelvic fin bud.[TAO] @@ -395169,14 +395013,14 @@ pelvic appendage apical ectodermal ridge - + - + EHDAA2 @@ -395250,7 +395094,7 @@ - + @@ -395605,14 +395449,14 @@ - + Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. TAO:0002188 ZFA:0001688 UBERON:0005427 corneal primordium - + @@ -395631,7 +395475,7 @@ - + ZFA @@ -395721,7 +395565,7 @@ - + A pancreatic duct that develops from the dorsal pancreatic bud. These data show that ducts within the zebrafish pancreas originally arise in situ from isolated progenitor cells rather than arising from reiterative branching of the pancreatic epithelium. This process of pancreatic duct formation in zebrafish may be analogous to the mechanism of duct formation in the mammalian mammary and salivary glands. (...) A related mechanism of duct formation has also been proposed to occur within the mammalian pancreatic epithelium.[uncertain][VHOG] @@ -395749,7 +395593,7 @@ dorsal pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png - + @@ -395762,7 +395606,7 @@ - + EHDAA2 @@ -395844,7 +395688,7 @@ - + A loop of nerves that are part of the cervical plexus that lies superficial to the internal jugular vein in the carotid sheath. Branches from the ansa cervicalis innervate three of the four infrahyoid muscles, including the sternohyoid muscle, the sternothyroid muscle, and the omohyoid muscle. BAMS:ancer EHDAA2:0000124 @@ -395858,14 +395702,14 @@ ansa cervicalis http://upload.wikimedia.org/wikipedia/commons/e/e6/Gray795.png - + - + EHDAA2 @@ -395896,7 +395740,7 @@ - + A blood vessel that supplies the anterior portion of the spinal cord. It arises from branches of the vertebral arteries and is supplied by the anterior segmental medullary arteries, including the artery of Adamkiewicz, and courses along the anterior aspect of the spinal cord. @@ -395918,14 +395762,14 @@ anterior spinal artery http://upload.wikimedia.org/wikipedia/commons/7/73/Anterior_spinal_cord_-_very_low_mag.jpg - + - + EHDAA2 @@ -395992,7 +395836,7 @@ - + The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates. the merged ventral aortae of the embryo which supplies blood to the aortic arches[TMD][http://medical-dictionary.thefreedictionary.com/aortic+sac]. EHDAA2:0004145 @@ -396006,7 +395850,7 @@ aortic sac - + @@ -396019,7 +395863,7 @@ - + EHDAA2 @@ -396479,7 +396323,7 @@ - + @@ -396498,7 +396342,7 @@ - + A fetal blood vessel connecting the pulmonary artery with the descending aorta[MESH]. In the developing fetus, the ductus arteriosus is a shunt connecting the pulmonary artery to the aortic arch. It allows most of the blood from the right ventricle to bypass the fetus' fluid-filled lungs, protecting the lungs from being overworked and allowing the left ventricle to strengthen. There are two other fetal shunts, the ductus venosus and the foramen ovale[MP]. the fetal vessel that connects the left pulmonary artery with the descending aorta; the ductus arteriosus normally regresses into a fibrous cord, the ligamentum arteriousum after birth[MP]. The temporary channel or blood vessel between the aorta and pulmonary artery in the fetus. [TFD][VHOG] On the other hand, in the sister clade of the actinopterygians, the sarcopterygians, the gill circulation is supplemented with lung ventilation. As a result, the pulmonary artery and vein and a functional ductus arteriosus arose as a major evolutionary innovation from the sixth arch, giving the organism a flexible shunt to balance blood supply to and from gills and lungs according to environmental conditions.[well established][VHOG] @@ -396530,24 +396374,24 @@ ductus arteriosus http://upload.wikimedia.org/wikipedia/commons/e/ee/Gray502.png - + - + - + EHDAA2 - + left branch embryology.ch @@ -396646,7 +396490,7 @@ - + An intercostal muscle that aids in quiet and forced inhalation via elevation of the ribs, and expanding the transverse dimensions of the thoracic cavity. Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG] @@ -396677,7 +396521,7 @@ external intercostal muscle http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png - + @@ -396690,7 +396534,7 @@ - + EHDAA2 @@ -396811,15 +396655,15 @@ - + - - + + The lateral abdominal wall muscle that is the most superficial, immediately superficial to the internal oblique. Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG] @@ -396856,35 +396700,35 @@ abdominal external oblique muscle http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg - + - + - + - + lower 6 intercostal nerve + subcostal nerve dbpedia - + dbpedia - + EHDAA2 @@ -397298,9 +397142,9 @@ - - - + + + @@ -397334,34 +397178,34 @@ greater omentum http://upload.wikimedia.org/wikipedia/commons/8/8d/Gray1035.png - + - + - + - + OG - + Wikipedia - + Wikipedia @@ -397511,7 +397355,7 @@ - + @@ -397530,14 +397374,14 @@ UBERON:0005450 greater sac cavity - + - + EHDAA2 @@ -397668,7 +397512,7 @@ - + A three-dimensional arrangement formed by plates of hepatocytes, usually one cell thick, that radiates from the center of the liver lobule; hepatic laminae are highly branched, irregular structures bordered by endothelial lined vascular spaces called hepatic sinusoids. EMAPA:37880 @@ -397683,14 +397527,14 @@ hepatic cord - + - + FMA @@ -397827,9 +397671,9 @@ - - - + + + The lateral abdominal wall muscle that is deep to the external oblique and superficial to the transversus. Behind the thorax, the lateral group (of muscles in reptiles and mammals) remains essentially as for amphibians. (It breaks into three sheet-like layers: external oblique muscle, the internal oblique, and the transversus). More anteriorly, however, the ribs, now enlarged, penetrate and alter this group of muscles. The transversus is excluded from the thorax and the external and internal obliques become, respectively, the external and internal intercostal muscles, which contribute to the new function of ventilation of the lungs.[well established][VHOG] EHDAA2:0000879 @@ -397863,36 +397707,36 @@ abdominal internal oblique muscle http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_trunk_muscles.jpg - + - + - + - + Inguinal ligament Iliac crest and the Lumbodorsal fascia. dbpedia - + Linea alba Xiphoid process and the inferior ribs. dbpedia - + Linea alba Xiphoid process and the inferior ribs. dbpedia @@ -398245,8 +398089,8 @@ - - + + EHDAA2:0000966 EMAPA:16544 FMA:18822 @@ -398255,25 +398099,25 @@ UBERON:0005458 left umbilical artery - + - + - + check this EHDAA2 - + check this EHDAA2 @@ -398389,18 +398233,18 @@ - - - - + + + + - - + + An axial muscle that originates in the cervical vertebraae inserts on the scapula. AAO:0010689 @@ -398421,66 +398265,66 @@ levator scapulae muscle https://upload.wikimedia.org/wikipedia/commons/b/bc/Levator_scapulae.png - + - + - + - + - + - + - + EHDAA2 - + Kardong - + cervical nerve and dorsal scapular nerve dbpedia - + EHDAA2 - + Posterior tubercles of transverse processes of C1 - C4 vertebrae dbpedia - + Superior part of medial border of scapula dbpedia @@ -398534,7 +398378,7 @@ - + Subdivision of abdominal segment of trunk which in humans is demarcated from the front of the abdomen by the posterior surface of the anterior layer of the thoracolumbar fascia and the anterior surface of the lumbar vertebral column; together with the front of the abdomen, it constitutes the abdomen[Modified from FMA]. lumbar lumbar region @@ -398560,14 +398404,14 @@ overlaps with region sometimes called 'loin' lower back - + - + MA @@ -398921,9 +398765,9 @@ - - - + + + The platysma is a pharyngeal arch 2 muscle and a superficial facial muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical branch of the facial nerve. It attaches to the mandible and it attaches to the skin of the head, neck, and thoracic region where it is found superficial to the clavicle. Burrows et al. (2011) argue that in hylobatids (and, presumably, other primates) the platysma in the region of the modiolus represents both the cervicale and myoides muscles. The platysma is a pharyngeal arch 2 muscle and a superficial facial muscle that participates in oral/pharyngeal behaviors and is innervated by the cervical branch of the facial nerve, and attaches to the skin.[FEED] @@ -398951,15 +398795,15 @@ https://github.com/obophenotype/uberon/issues/472 http://upload.wikimedia.org/wikipedia/commons/f/fb/Platysma.png - + - + - + @@ -398972,21 +398816,21 @@ - + cervical branch of the facial nerve dbpedia - + base of mandible; skin of cheek and lower lip; angle of mouth; orbicularis oris dbpedia - + base of mandible; skin of cheek and lower lip; angle of mouth; orbicularis oris dbpedia @@ -399107,8 +398951,8 @@ - - + + EHDAA2:0001760 EMAPA:16545 FMA:18821 @@ -399117,25 +398961,25 @@ UBERON:0005470 right umbilical artery - + - + - + check this EHDAA2 - + check this EHDAA2 @@ -399350,7 +399194,7 @@ - + A portion of the lateral venous sinus, bulging prominently into the mastoid cavity, that serves as a principal conduit by which blood leaves the cranium[EPIC]. The sigmoid is drained by the internal jugular vein. The sigmoid sinuses, within a human head, are 2 areas beneath the brain, which allow blood veins to span the area, from the center of the head downward. They drain from the transverse sinuses (under the back of the brain) to the internal jugular vein. Each sigmoid sinus begins beneath the temporal bone and follows a tortuous course to the jugular foramen, at which point the sinus becomes continuous with the internal jugular vein[Wikipedia:Sigmoid_sinus]. @@ -399368,7 +399212,7 @@ sigmoid sinus https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.gif - + @@ -399381,7 +399225,7 @@ - + Palaeos @@ -399529,7 +399373,7 @@ - + A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD]. sulcus limitans @@ -399540,14 +399384,14 @@ UBERON:0005478 sulcus limitans of neural tube - + - + EHDAA2 @@ -399811,7 +399655,7 @@ - + Either of the two lateral lobes that constitute the thymus. each lobe of the thymus can be divided into a central medulla and a peripheral cortex which is surrounded by an outer capsule. Each lobe is composed of numerous lobules held together by delicate areolar tissue; the entire organ being enclosed in an investing capsule of a similar but denser structure. The primary lobules vary in size from that of a pin's head to that of a small pea, and are made up of a number of small nodules or follicles.[WP] @@ -399824,14 +399668,14 @@ thymus lobe - + - + FMA-abduced-lr @@ -400048,7 +399892,7 @@ - + @@ -400083,14 +399927,14 @@ venous dural sinus https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.gif - + - + FMA @@ -400497,7 +400341,7 @@ - + A blood vessel that is associated with the lens. In mammals, this is transient and normally nourishes the retina, immature lens and primary vitreous of the developing eye. we are currently conflating vessel and vasculature - we may wish to split this class - see also vascular plexus term. The ZFA class represents the vasculature EHDAA:4735 @@ -400514,14 +400358,14 @@ hyaloid vessel - + - + ZFA-modified @@ -400571,14 +400415,14 @@ - + - + One of a group of muscles used in mastication and swallowing. These muscles are attached to the hyoid bone, which is suspended in the neck and forms the base of the tongue and larynx. The muscles are divided into suprahyoid (superior) or infrahyoid (inferior) groups relative to the bone[WP, generalized]. Although the zebrafish occupies a rather derived phylogenetic position within actinopterygians and even within teleosts, with respect to the mandibular, hyoid and hypobranchial muscles it seems justified to consider it an appropriate representative of these two groups. Among these muscles, the three with clear homologues in tetrapods and the further three identified in sarcopterygian fish are particularly appropriate for comparisons of results between the actinopterygian zebrafish and the sarcopterygians.[well established][VHOG] attachment sites may vary by species; for example, in orangutans, the posterior digastric does not attach to the hyoid, but we may still consider this a (supra)hyoid muscle. @@ -400597,24 +400441,24 @@ hyoid muscle - + - + - + EHDAA2 - + EHDAA2 @@ -400854,7 +400698,7 @@ - + Multi-tissue structure that arises from the heart rudiment and will become the heart tube. BTO:0006179 EHDAA2:0001512 @@ -400872,14 +400716,14 @@ primitive heart tube - + - + ZFA @@ -400914,7 +400758,7 @@ - + Hindbrain segment or neuromere 1. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 1 @@ -400933,14 +400777,14 @@ rhombomere 1 - + - + definitional @@ -401156,7 +401000,7 @@ - + The third transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 3 @@ -401176,14 +401020,14 @@ rhombomere 3 - + - + definitional @@ -401218,7 +401062,7 @@ - + The fourth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 4 @@ -401238,14 +401082,14 @@ rhombomere 4 - + - + definitional @@ -401280,7 +401124,7 @@ - + The fifth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 5 @@ -401300,14 +401144,14 @@ rhombomere 5 - + - + definitional @@ -401342,7 +401186,7 @@ - + The sixth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 6 @@ -401362,14 +401206,14 @@ rhombomere 6 - + - + definitional @@ -401404,7 +401248,7 @@ - + The seventh transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 7 @@ -401423,14 +401267,14 @@ rhombomere 7 - + - + definitional @@ -401465,7 +401309,7 @@ - + The eighth transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 8 @@ -401483,14 +401327,14 @@ rhombomere 8 - + - + definitional @@ -401573,9 +401417,9 @@ - - - + + + A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production[ZFA]. [PMID]. we follow Kardong table 13.1 in having some developmental contribution of pouch 4 in mammals, but this isn't reflected in EHDAA2. Consider adding distinct term for mesenchyme (see EHDAA2), to indicate NC constribution. A small outgrowth of the pharyngeal epithelium that is the site of lymphocyte cell production. Willett et al, 1999.[TAO] @@ -401593,34 +401437,34 @@ thymus primordium - + - + - + - + ZFA - + EHDAA2 - + mesenchymal ZFA https://github.com/obophenotype/uberon/wiki/The-neural-crest @@ -401673,7 +401517,7 @@ - + Cranial neural crest which gives rise to the trigeminal ganglion. todo - compare ZFA and EHDAA2 representation We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] @@ -401689,7 +401533,7 @@ trigeminal neural crest - + @@ -401708,7 +401552,7 @@ - + EHDAA2 @@ -401734,7 +401578,7 @@ - + @@ -401762,7 +401606,7 @@ gonad primordium - + @@ -401775,7 +401619,7 @@ - + ZFA @@ -401833,7 +401677,7 @@ - + Cranial neural crest that gives rise to the facio-acoustic ganglion. We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] EHDAA2:0000492 @@ -401847,7 +401691,7 @@ facio-acoustic neural crest - + @@ -401860,7 +401704,7 @@ - + EHDAA2 @@ -402023,7 +401867,7 @@ - + The second transiently divided segment of the developing rhombencephalon; rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates; rhombomeres are numbered in caudal to rostral order. Hindbrain segment or neuromere. Kimmel et al, 1995.[TAO] 3 @@ -402043,14 +401887,14 @@ rhombomere 2 - + - + definitional @@ -403216,15 +403060,23 @@ - + + + + - - + + + + + + + Somite located in the head region, caudal to the otic vesicle. in humans this includes somites 1-4 They provide the epaxial and hypaxial muscles of the neck, the pharyngeal and laryngeal muscles that develop in the caudal branchial arches and the musculature of the tongue. Despite their localisation in the head, myogenic precursors from occipital somites essentially follow the trunk programmes (E. H. Walters and S. D., unpublished). during evolution, have been secondarily incorporated into the head (Gans and Northcutt, 1983) @@ -403237,24 +403089,14 @@ UBERON:0005594 head somite - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -403301,7 +403143,7 @@ - + @@ -403320,7 +403162,7 @@ lung primordium - + @@ -403333,7 +403175,7 @@ - + XAO @@ -403518,8 +403360,8 @@ - - + + The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum. The dorsal sheet of the primitive mesentery that encloses the stomach. The greater omentum develops from the dorsal mesogastrium. [TFD][VHOG] EHDAA2:0000416 @@ -403534,11 +403376,11 @@ UBERON:0005602 dorsal mesogastrium - + - + @@ -403551,13 +403393,13 @@ - + EHDAA2 - + EHDAA2 @@ -403605,8 +403447,8 @@ - - + + EMAPA:16844 MA:0001636 VHOG:0000215 @@ -403615,24 +403457,24 @@ UBERON:0005604 extrahepatic part of hepatic duct - + - + - + MA - + MA @@ -403654,8 +403496,8 @@ - - + + EMAPA:16845 MA:0001637 VHOG:0000216 @@ -403664,24 +403506,24 @@ UBERON:0005605 intrahepatic part of hepatic duct - + - + - + MA - + MA @@ -403737,7 +403579,7 @@ - + @@ -403755,14 +403597,14 @@ UBERON:0005607 hyaloid vascular plexus - + - + EHDAA2 @@ -403778,7 +403620,7 @@ - + The second arch becomes the hyoid artery, which is prominent in early development and normally persists as the caroticotympanic branch of the ICA[Padget]. EHDAA:3342 @@ -403791,14 +403633,14 @@ hyoid artery - + - + http://www.ajnr.org/cgi/content/full/21/3/572 @@ -404005,7 +403847,7 @@ - + @@ -404030,14 +403872,14 @@ UBERON:0005612 intercostal artery - + - + EHDAA2 @@ -404320,8 +404162,8 @@ - - + + The outgrowths of the embryonic maxillary prominences that come together during prenatal development to form the secondary palate. consider splitting into embryonic/fully formed The outgrowths of the embryonic maxillae that come together during prenatal development to form the secondary palate. [TFD][VHOG] @@ -404340,24 +404182,24 @@ secondary palatal shelf - + - + - + EHDAA2 - + cjm @@ -404408,9 +404250,9 @@ - - - + + + The part of the palate formed from the intermaxillary segment. The shelf separating the oral and nasal cavities that is formed during early embryonic development from protrusions of tissue between the olfactory pits. [TFD][VHOG] Early tetrapod possessed a primary palate that included the vomer, pterygoid, parasphenoid, palatine and ectopterygoid bones. Therapsid evolved a partial secondary palate formed by the medial extension of the premaxilla and maxilla. Mammals have a secondary palate that, in addition to extensions of the premaxilla and maxilla, includes part of the palatine bone[VHOG] @@ -404434,35 +404276,35 @@ primary palate - + - + - + - + consider reversing VHOG - + EHDAA2-abduced - + Wikipedia http://www.indiana.edu/~anat550/hnanim/face/face.html @@ -404538,11 +404380,11 @@ - - - - - + + + + + A rhombus-shaped muscle associated with the scapula and chiefly responsible for its retraction. There are two rhomboid muscles. TODO - add child terms EHDAA2:0001635 @@ -404561,56 +404403,56 @@ rhomboid http://upload.wikimedia.org/wikipedia/commons/a/aa/Rhomboidei.PNG - + - + - + - + - + - + EHDAA2 - + EHDAA2 - + nuchal ligaments spinous processes of the C7 to T5 vertebrae dbpedia - + nuchal ligaments spinous processes of the C7 to T5 vertebrae dbpedia - + dbpedia @@ -404806,7 +404648,7 @@ - + @@ -404822,14 +404664,14 @@ UBERON:0005625 tubotympanic recess lumen - + - + ISBN:0073040584 @@ -404851,7 +404693,7 @@ - + Portion of ventral mesentery closest to the stomach. The mesentery that originates from the ventral side of the peritoneal cavity.[TAO] The ventral sheet of the primitive mesentery that encloses the stomach. The lesser omentum develops from the ventral mesogastrium. [TFD][VHOG] @@ -404871,14 +404713,14 @@ ventral mesogastrium http://upload.wikimedia.org/wikipedia/commons/c/cf/Gray984.png - + - + EHDAA2 @@ -406192,7 +406034,7 @@ - + An epithelium that is part of a primary palate. EHDAA2:0001500 EMAPA:17643 @@ -406201,14 +406043,14 @@ UBERON:0005659 primary palate epithelium - + - + EHDAA2 @@ -406584,12 +406426,12 @@ - + EHDAA2:0000314 UBERON:0005667 connecting stalk mesoderm - + @@ -406602,7 +406444,7 @@ - + EHDAA2 @@ -407269,8 +407111,8 @@ - - + + An orbitosphenoid endochondral element that is composed primarily of cartilage tissue. EHDAA2:0001329 EHDAA:9554 @@ -407278,11 +407120,11 @@ UBERON:0005687 orbitosphenoid cartilage element - + - + @@ -407295,13 +407137,13 @@ - + EHDAA2 - + EHDAA2 @@ -408062,7 +407904,7 @@ - + An odontogenic papilla that is part of a upper jaw molar. EHDAA2:0002127 EHDAA:8051 @@ -408072,14 +407914,14 @@ UBERON:0005700 upper jaw molar odontogenic papilla - + - + EHDAA2 @@ -408121,7 +407963,7 @@ - + An odontogenic papilla that is part of a lower jaw molar. EHDAA2:0001027 EHDAA:8015 @@ -408131,14 +407973,14 @@ UBERON:0005701 lower jaw molar odontogenic papilla - + - + EHDAA2 @@ -408272,8 +408114,8 @@ - - + + Mesenchyme that is part of a developing primary palate. EHDAA2:0001501 EHDAA:6968 @@ -408282,24 +408124,24 @@ UBERON:0005705 primary palate mesenchyme - + - + - + EHDAA2 - + EHDAA2 @@ -408347,7 +408189,7 @@ - + An odontogenic papilla that is part of a upper jaw incisor. EHDAA2:0002123 EMAPA:17941 @@ -408356,14 +408198,14 @@ UBERON:0005707 upper jaw incisor odontogenic papilla - + - + EHDAA2 @@ -408405,7 +408247,7 @@ - + An odontogenic papilla that is part of a lower jaw incisor. EHDAA2:0001023 EMAPA:17920 @@ -408414,14 +408256,14 @@ UBERON:0005708 lower jaw incisor odontogenic papilla - + - + EHDAA2 @@ -408676,21 +408518,21 @@ - + An apical ectodermal ridge that is part of a footplate. EHDAA2:0000547 EMAPA:17251 UBERON:0005719 footplate apical ectodermal ridge - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -408763,14 +408605,14 @@ - + - + A mesoderm that has the potential to develop into a pronephros. Portion of tissue that consists of the mesenchymal precursor to the pronephric kidney and that begins to separate from the intermediate mesoderm at NF stage 21 and epithelializes by NF stage 30.[AAO] AAO:0011090 @@ -408788,24 +408630,24 @@ the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 "Developmental Biology", PMID:10720431 "Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm"]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney pronephric mesoderm - + - + - + ZFA - + Bgee:AN @@ -409195,7 +409037,7 @@ - + EHDAA2:0000474 EMAPA:31862 EMAPA:31863 @@ -409206,7 +409048,7 @@ UBERON:0005728 extraembryonic mesoderm - + @@ -409219,7 +409061,7 @@ - + EHDAA2 @@ -409389,7 +409231,7 @@ - + @@ -409404,14 +409246,14 @@ paired limb/fin field - + - + ISBN:9780878932504 ZFA-inferred @@ -409845,7 +409687,7 @@ - + @@ -409886,14 +409728,14 @@ optic foramen https://upload.wikimedia.org/wikipedia/commons/8/8e/Orbita_mensch.jpg - + - + FMA-abduced-lr @@ -409977,10 +409819,9 @@ - - - - + + + Embryonic fibrovascular mesodermal tissue located between the optic cup and lens vesicle that normally regresses during the development of the vitreous body[MP]. Acellular in EHDAA2, MP defs says tissue EHDAA2:0001502 @@ -409992,15 +409833,15 @@ primary vitreous - + - + - + @@ -410014,19 +409855,19 @@ - + cjm - + EHDAA2 - + EHDAA2 @@ -410067,7 +409908,7 @@ - + @@ -410084,14 +409925,14 @@ glomerular tuft - + - + Wikipedia @@ -410448,8 +410289,8 @@ - - + + @@ -410477,24 +410318,24 @@ urorectal septum http://upload.wikimedia.org/wikipedia/commons/f/fb/Gray992.png - + - + - + MA - + EHDAA2 @@ -410703,7 +410544,7 @@ - + @@ -410732,14 +410573,14 @@ glomerular basement membrane http://upload.wikimedia.org/wikipedia/commons/d/de/PhysiologieGlom%C3%A9rulaire.png - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -411417,7 +411258,7 @@ - + Control of blood pressure is crucially dependent on the integrity of a small region of the brainstem called the ventrolateral medulla. Within this part of the brain are the cells that control the heart, blood vessels, swallowing, breathing and many other functions of the body that are not noticed at a conscious level; such unconscious activities are known as 'Autonomic'. One of these regions is the Rostral Ventrolateral Medulla (RVLM) is also known as the pressor area of the medulla (medulla pressor). It receives inhibitory GABAergic input from the caudal ventrolateral medulla (CVLM). The RVLM is the primary regulator of the sympathetic nervous system, sending excitatory fibers (catecholaminergic) to the sympathetic preganglionic neurons in the spinal cord, via reticulospinal tract[WP]. BTO:0002778 Wikipedia:Rostral_ventrolateral_medulla @@ -411426,14 +411267,14 @@ UBERON:0005807 rostral ventrolateral medulla - + - + Wikipedia @@ -412074,7 +411915,7 @@ - + A group of axons that are from neurons involved in proprioception from the lower trunk and lower limb[GO]. The fasciculus gracilis (tract of Goll) is a bundle of axon fibres in the dorsomedial spinal cord that carries information about fine touch, vibrations, and conscious proprioception from the lower part of the body to the brain stem. It is part of the posterior column of the spinal cord, which also contains the fasciculus cuneatus, which carries the same information from the upper part of the body. This tract and its continuation in the brain stem is often referred to as the posterior column-medial lemniscus pathway. The fasciculus gracilis is wedge-shaped on transverse section and lies next the posterior median septum, its base being at the surface of the medulla spinalis, and its apex directed toward the posterior gray commissure. It increases in size from below upward, and consists of long thin fibers that are derived from the posterior nerve roots, and ascend as far as the medulla oblongata, where they end in the nucleus gracilis. The tract of Goll was named after Swiss neuroanatomist Friedrich Goll[WP]. distinction between axon tract and fasicle is unclear UBERON:0004168 @@ -412101,7 +411942,7 @@ gracile fasciculus http://upload.wikimedia.org/wikipedia/commons/b/b2/Spinal_cord_tracts_-_English.svg - + @@ -412114,7 +411955,7 @@ - + GO @@ -413428,7 +413269,7 @@ - + A delimited region of dense mesenchyme within looser mesenchyme. AEO:0000148 EHDAA2_RETIRED:0003148 @@ -413437,7 +413278,7 @@ UBERON:0005856 developing mesenchymal condensation - + @@ -413456,7 +413297,7 @@ - + AEO-modified-relation @@ -413478,7 +413319,7 @@ - + @@ -413498,7 +413339,7 @@ UBERON:0005863 cartilaginous condensation - + @@ -413511,7 +413352,7 @@ - + AEO @@ -413590,7 +413431,7 @@ - + @@ -413609,7 +413450,7 @@ UBERON:0005866 pre-cartilage condensation - + @@ -413622,7 +413463,7 @@ - + AEO @@ -413841,15 +413682,15 @@ - + - - + + An indentation of the olfactory placode which ends when the pits hollows out to form the nasopharynx[GO]. we represent the relationship as develops from, though in fact the pit is formed as an indentation in the placode By the upgrowth of the surrounding parts the olfactory areas are converted into pits, the nasal pits or olfactory pits, which indent the fronto-nasal process and divide it into a medial and two lateral nasal processes[Wikipedia:Nasal_pit]. @@ -413869,15 +413710,15 @@ olfactory pit - + - + - + @@ -413890,19 +413731,19 @@ - + EMAPA - + EHDAA2 - + XAO:0000275 nasal pit @@ -414439,7 +414280,7 @@ - + @@ -414477,14 +414318,14 @@ undifferentiated genital tubercle http://upload.wikimedia.org/wikipedia/commons/d/d6/Gray1119.png - + - + EHDAA2 @@ -414847,8 +414688,8 @@ - - + + A subdivision of skeleton that supports pharyngeal arch 2. it's not clear where AAO:'hyobranchial skeleton' belongs AAO:0000665 @@ -414864,24 +414705,24 @@ UBERON:0005884 hyoid arch skeleton - + - + - + ZFA - + cjm @@ -414935,8 +414776,8 @@ - - + + The part of the pharyngeal arch skeleton that excludes the skeleton of arches 1 and 2. Skeletal and cartilage elements of the gill arches; the last five of the set of seven pharyngeal arches; the numbering system can be confusing; generally branchial arch #1 is the first gill arch, or the third pharyngeal arch, but some authors do not follow this convention. Kimmel et al, 1995.[TAO] @@ -414956,24 +414797,24 @@ UBERON:0005886 post-hyoid pharyngeal arch skeleton - + - + - + ZFA - + ZFA-modified @@ -415143,8 +414984,8 @@ - - + + The epithelial lining of the surface of the coelom. EHDAA2:0004049 used to be called 'coelomic epithelium' but is now 'gonadal ridge mesothelium' Wikipedia:Coelomic_epithelium @@ -415154,24 +414995,24 @@ UBERON:0005891 coelomic epithelium - + - + - + XAO - + XAO @@ -415833,9 +415674,9 @@ - - - + + + A serous sac which is the aggregate of the conjunctiva plus the conjunctival space. EMAPA:18233 FMA:20291 @@ -415845,15 +415686,15 @@ UBERON:0005908 conjunctival sac - + - + - + @@ -415866,19 +415707,19 @@ - + FMA - + HPO:pr - + MA @@ -416174,10 +416015,10 @@ - - - - + + + + A turbinal located on the maxilla bone. In many carnivores and ungulates, the maxilloturbinal is the most complex element immediately posterior to the vestibule[PMID:25312359] @@ -416202,19 +416043,19 @@ inferior nasal concha http://upload.wikimedia.org/wikipedia/commons/6/62/Gray192.png - + - + - + - + @@ -416227,25 +416068,25 @@ - + FMA-abduced-lr - + dbpedia - + dbpedia - + ISBN:1588903958 @@ -416910,7 +416751,7 @@ - + trabecula trabecular cartilage EFO:0003677 @@ -416921,7 +416762,7 @@ neurocranial trabecula - + @@ -416934,7 +416775,7 @@ - + ZFA @@ -417035,7 +416876,7 @@ - + Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk. infundibulum EMAPA:37926 @@ -417057,14 +416898,14 @@ UBERON:0005953 outflow part of right ventricle - + - + PMID:17276708 @@ -417774,7 +417615,7 @@ - + A sheet of somatopleure that grows upward over the embryo and eventually meets in the midline enclosing the embryo, eventually giving rise to the amnion and chorion[Kardong]. EMAPA:16076 amnionic fold @@ -417782,14 +417623,14 @@ amniotic fold - + - + ISBN:0073040584 @@ -417987,7 +417828,7 @@ - + Missing definition for term UBERON:0005976. Please replace it using linked reference. synonym with hemispheric lobule VIIA based on FMA and NIFSTD BAMS:SSL @@ -418024,14 +417865,14 @@ ansiform lobule crus I - + - + HBA @@ -418203,7 +418044,7 @@ - + Missing definition for term UBERON:0005977. Please replace it using linked reference. TODO - check BAMS:ISL @@ -418239,14 +418080,14 @@ ansiform lobule crus II - + - + HBA @@ -419065,7 +418906,7 @@ - + @@ -419084,14 +418925,14 @@ atrium myocardial trabecula - + - + ZFA @@ -419143,7 +418984,7 @@ - + @@ -419166,14 +419007,14 @@ atrioventricular septum - + - + PMID:15797462 Wikipedia @@ -419510,7 +419351,7 @@ - + @@ -419533,14 +419374,14 @@ chorda tendineae http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray493.png - + - + FMA-abduced @@ -419920,7 +419761,7 @@ - + @@ -419937,14 +419778,14 @@ vitelline artery http://upload.wikimedia.org/wikipedia/commons/5/55/Gray31.png - + - + ventral branch @@ -420038,8 +419879,8 @@ - - + + @@ -420062,24 +419903,24 @@ hair follicle matrix region - + - + - + FMA - + FMA @@ -420217,7 +420058,7 @@ - + @@ -420238,14 +420079,14 @@ the MP class implies this is part of both the medulla oblongata and the PSNS, which violates the spatial disjointness constraint. We weaken this to continuous_with here. pre-Botzinger complex - + - + Wikipedia @@ -420459,7 +420300,7 @@ - + A small transparent canal running through the vitreous body from the optical nerve disc to the lens. It is formed by an invagination of the hyaloid, a membrane which encloses the vitreous body[WP]. FMA:58837 SCTID:362506002 @@ -420472,14 +420313,14 @@ hyaloid canal http://upload.wikimedia.org/wikipedia/commons/e/eb/Gray869.png - + - + Wikipedia @@ -420523,7 +420364,7 @@ - + Vein internal to the eye. Isogai et al. 2001.[TAO] EHDAA2:0000791 TAO:0005047 @@ -420533,14 +420374,14 @@ UBERON:0006011 hyaloid vein - + - + EHDAA2 @@ -421856,7 +421697,7 @@ - + The falx cerebri, also known as the cerebral falx, so named from its sickle-like form, is a strong, arched fold of dura mater which descends vertically in the longitudinal fissure between the cerebral hemispheres. It is narrow in front, where it is attached to the crista galli of the ethmoid; and broad behind, where it is connected with the upper surface of the tentorium cerebelli. Its upper margin is convex, and attached to the inner surface of the skull in the middle line, as far back as the internal occipital protuberance; it contains the superior sagittal sinus. Its lower margin is free and concave, and contains the inferior sagittal sinus. The falx cerebri is known to calcify with age. EMAPA:18551 FMA:83967 @@ -421871,14 +421712,14 @@ falx cerebri http://upload.wikimedia.org/wikipedia/commons/f/ff/Falxcerebri.jpg - + - + definitional @@ -422438,7 +422279,7 @@ - + @@ -422468,14 +422309,14 @@ cervical region of vertebral column - + - + FMA @@ -422553,7 +422394,7 @@ - + @@ -422585,14 +422426,14 @@ thoracic region of vertebral column - + - + FMA @@ -422664,12 +422505,6 @@ - - - - - - @@ -422750,12 +422585,6 @@ - - - - - - @@ -422830,12 +422659,6 @@ - - - - - - @@ -422932,13 +422755,7 @@ - - - - - - - + @@ -422957,14 +422774,14 @@ subdivision of vertebral column - + - + FMA @@ -423115,8 +422932,8 @@ - - + + @@ -423150,24 +422967,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/urinary-bladder-female/v1.2/assets/3d-vh-f-urinary-bladder.glb https://cdn.humanatlas.io/digital-objects/ref-organ/urinary-bladder-male/v1.2/assets/3d-vh-m-urinary-bladder.glb - + - + - + EHDAA2-modified - + EHDAA2 @@ -423234,7 +423051,7 @@ - + Region of cortex near to the rhinal sulcus. It is defined differently in different nomenclatures, due in part to the lack of agreement on the definition of the border of this region. In the rat, the perirhinal cortex occupies only caudal levels of the rhinal sulcus while in the monkey, it occurpies the full rostrocaudal extent of the rhinal sulcus (Burwell et al., Hippocampus, 5: 390-408, 1995). in MA classified as part of insular cortex, but this is contested by MM - https://support.crbs.ucsd.edu/browse/NIF-9830 @@ -423261,14 +423078,14 @@ perirhinal cortex - + - + NIFSTD @@ -423329,7 +423146,7 @@ - + @@ -423367,7 +423184,7 @@ UBERON:0006086 stria medullaris - + @@ -423380,7 +423197,7 @@ - + NIFSTD @@ -424154,7 +423971,7 @@ - + @@ -424181,14 +423998,14 @@ superior parietal cortex - + - + NIFSTD @@ -424970,7 +424787,7 @@ - + Missing definition for term UBERON:0006101. Please replace it using linked reference. B09-24 BAMS:ACA @@ -424997,7 +424814,7 @@ Brodmann (1909) area 24 https://github.com/obophenotype/uberon/issues/1161 - + @@ -425010,7 +424827,7 @@ - + https://orcid.org/0000-0003-3308-6245 @@ -425125,7 +424942,7 @@ - + Brodmann area 35, together with Brodmann area 36, is most frequently referred to as perirhinal cortex. Brodmann found a cytoarchitecturally homologous area in the monkey (Cercopithecus), but it was so weakly developed that he omitted it from the cortical map of that species (Brodmann-1909). B09-35 @@ -425148,7 +424965,7 @@ UBERON:0006102 Brodmann (1909) area 35 - + @@ -425161,7 +424978,7 @@ - + WP @@ -425251,7 +425068,7 @@ - + Ectorhinal area 36 is a subdivision of the cytoarchitecturally defined temporal region of cerebral cortex. With its medial boundary corresponding approximately to the rhinal sulcus it is located primarily in the fusiform gyrus. Cytoarchitecturally it is bounded laterally and caudally by the inferior temporal area 20, medially by the perirhinal area 35 and rostrally by the temporopolar area 38 (H) (Brodmann-1909). Together with Brodmann area 35, it comprises the perirhinal cortex. B09-36 BIRNLEX:1769 @@ -425272,7 +425089,7 @@ UBERON:0006104 Brodmann (1909) area 36 - + @@ -425285,7 +425102,7 @@ - + WP @@ -425815,7 +425632,7 @@ - + Part of fornix adjacent to the fimbria comprising flattened bands of fibers that extend from the fimbria, running underneath the corpus callosum. BAMS:pfx @@ -425837,14 +425654,14 @@ UBERON:0006115 posterior column of fornix - + - + NIFSTD @@ -426644,7 +426461,7 @@ - + FMA:77610 NLXANAT:20090302 diagonal band subdivision @@ -426653,14 +426470,14 @@ subdivision of diagonal band - + - + NIFSTD @@ -427760,19 +427577,19 @@ - + The mesonephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the mesonephros, which helps to support the capillary loops in a renal glomerulus. UBERON:0006182 mesonephric glomerular mesangium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -427800,30 +427617,30 @@ - - + + Missing definition for term UBERON:0006183. Please replace it using linked reference. UBERON:0006183 mesonephric glomerular capillary - + - + - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -428066,7 +427883,7 @@ - + @@ -428084,14 +427901,14 @@ UBERON:0006197 auricular vein - + - + cjm @@ -428255,8 +428072,8 @@ - - + + EMAPA:37472 FMA:71216 MA:0002091 @@ -428267,24 +428084,24 @@ classes unified on basis of spatial anatomy ontology synonyms caudal humeral circumflex vein - + - + - + FMA/obol - + FMA/obol @@ -428349,7 +428166,7 @@ - + concha FMA:61006 NCIT:C32362 @@ -428361,14 +428178,14 @@ conchal part of pinna - + - + http://php.med.unsw.edu.au @@ -428558,7 +428375,7 @@ - + @@ -428590,14 +428407,14 @@ aortico-pulmonary spiral septum http://upload.wikimedia.org/wikipedia/commons/b/b9/Gray470.png - + - + PMID:6844926 Wikipedia @@ -428706,7 +428523,7 @@ - + @@ -428722,14 +428539,14 @@ basioccipital cartilage element - + - + EHDAA2 @@ -428771,7 +428588,7 @@ - + @@ -428814,14 +428631,14 @@ buccopharyngeal membrane http://upload.wikimedia.org/wikipedia/commons/9/93/Gray977.png - + - + EHDAA2 @@ -429056,7 +428873,7 @@ - + @@ -429085,14 +428902,14 @@ rhombic lip - + - + EHDAA2 Wikipedia @@ -429238,7 +429055,7 @@ - + @@ -429278,14 +429095,14 @@ cloacal membrane http://upload.wikimedia.org/wikipedia/commons/d/d2/Gray991.png - + - + Wikipedia @@ -429355,8 +429172,8 @@ - - + + EHDAA2:0000340 EHDAA:6002 EMAPA:17749 @@ -429364,11 +429181,11 @@ deltoid pre-muscle mass - + - + @@ -429381,13 +429198,13 @@ - + EHDAA2 - + EHDAA2 @@ -429453,7 +429270,7 @@ - + @@ -429475,14 +429292,14 @@ future diencephalon - + - + EHDAA2 @@ -429612,9 +429429,9 @@ - - - + + + @@ -429630,34 +429447,34 @@ ethmoid bone primordium - + - + - + - + FMA - + AAO - + EHDAA2 @@ -429731,8 +429548,8 @@ - - + + EHDAA2:0000483 EHDAA:2925 EMAPA:17845 @@ -429740,24 +429557,24 @@ extrinsic ocular pre-muscle mass - + - + - + EHDAA2 - + EHDAA2 ISBN:0781772214 @@ -429800,7 +429617,7 @@ - + @@ -429815,14 +429632,14 @@ facio-acoustic VII-VIII preganglion complex - + - + EHDAA2 @@ -429849,7 +429666,7 @@ - + A differentiated genital tubercle that is part of a female reproductive system. EHDAA:8118 EMAPA:18680 @@ -429860,14 +429677,14 @@ female genital tubercle - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -430144,8 +429961,8 @@ - - + + @@ -430163,24 +429980,24 @@ future central tendon - + - + - + EHDAA2 - + mesenchyme cranial part Wikipedia @@ -430290,7 +430107,7 @@ - + @@ -430313,14 +430130,14 @@ future spinal cord - + - + EHDAA2 @@ -430366,8 +430183,8 @@ - - + + @@ -430384,24 +430201,24 @@ gallbladder primordium - + - + - + EMAPA - + EHDAA2 @@ -430485,8 +430302,8 @@ - - + + @@ -430503,24 +430320,24 @@ humerus cartilage element - + - + - + EHDAA2 - + EHDAA2 @@ -430556,7 +430373,7 @@ - + @@ -430573,14 +430390,14 @@ humerus pre-cartilage condensation - + - + EHDAA2 @@ -430615,7 +430432,7 @@ - + @@ -430631,14 +430448,14 @@ iliac pre-cartilage condensation - + - + EHDAA2 @@ -430666,7 +430483,7 @@ - + An incus endochondral element that is composed primarily of a pre-cartilage condensation. in EHDAA2 this develops from both mandibular and maxillary mesenchyme. We have still to extend homology relationships from quadrate/incus to their ontogenic precursors ( EHDAA2:0000813 @@ -430677,14 +430494,14 @@ incus pre-cartilage condensation - + - + EHDAA2-generalized @@ -430712,10 +430529,10 @@ - - - - + + + + A funnel-shaped diverticulum that extends downward from the anterior aspect of the floor of the third ventricle into the infundibulum of the hypophysis; the embryonic structure gives rise the neural component of the pituitary (pas nervosa). in FMA this is a cavity, whereas in EHDAA2 it is an epithelial sac BAMS:IRe @@ -430740,19 +430557,19 @@ infundibular recess of 3rd ventricle http://upload.wikimedia.org/wikipedia/commons/7/75/Gray654.png - + - + - + - + @@ -430765,25 +430582,25 @@ - + EMAPA - + EMAPA - + EHDAA2 - + EHDAA2 @@ -430999,7 +430816,7 @@ - + An ischial endochondral element that is composed primarily of cartilage tissue. EHDAA2:0000890 EHDAA:9570 @@ -431009,7 +430826,7 @@ ischial cartilage element - + @@ -431022,7 +430839,7 @@ - + EHDAA2 @@ -431124,8 +430941,8 @@ - - + + @@ -431157,11 +430974,11 @@ UBERON:0006257 laryngotracheal groove - + - + @@ -431174,13 +430991,13 @@ - + EHDAA2 - + EHDAA2 @@ -431302,7 +431119,7 @@ - + @@ -431320,7 +431137,7 @@ the collection consisting of the two lateral swellings and the medial swelling lingual swellings - + @@ -431333,7 +431150,7 @@ - + EHDAA2 @@ -431380,7 +431197,7 @@ - + A differentiated genital tubercle that is part of a male reproductive system. EHDAA:8138 EMAPA:17969 @@ -431392,14 +431209,14 @@ male genital tubercle - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -431441,7 +431258,7 @@ - + A malleus endochondral element that is composed primarily of a pre-cartilage condensation. EHDAA2:0001055 EHDAA:9026 @@ -431451,14 +431268,14 @@ malleus pre-cartilage condensation - + - + EHDAA2 @@ -431476,7 +431293,7 @@ - + @@ -431491,14 +431308,14 @@ Meckel's cartilage pre-cartilage condensation - + - + EHDAA2 @@ -431564,7 +431381,7 @@ - + @@ -431584,7 +431401,7 @@ mural trophectoderm - + @@ -431597,7 +431414,7 @@ - + EMAPA @@ -431640,8 +431457,8 @@ - - + + @@ -431671,11 +431488,11 @@ nasolacrimal groove http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray163.png - + - + @@ -431688,13 +431505,13 @@ - + EHDAA2 - + EHDAA2 @@ -431733,7 +431550,7 @@ - + The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. TODO - check ordering; awaiting confirmation from JB The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. [Carson_JL, Dehart_DB, Developmental_Dynamics_(1994)_201:_260-278, Gesteland_K_and_Schoenwolf_GC, Inagaki_T, Morphogenesis_of_the_murine_node_and_notochordal_plate, The_prechordal_plate, Vrablic_T, see_Mueller_F_and_O'Rahilly_R, the_rostral_end_of_the_notochord_and_nearby_median_features_in_staged_human_embryos._Cells_Tissues_Organs_(2003)_173:_1-20_and_Sulik_K][VHOG] @@ -431747,7 +431564,7 @@ notochordal plate - + @@ -431760,7 +431577,7 @@ - + EHDAA2 @@ -431797,7 +431614,7 @@ - + A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. EHDAA2:0001279 EHDAA:224 @@ -431813,14 +431630,14 @@ The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus. notochordal process - + - + EHDAA2 @@ -432106,7 +431923,7 @@ - + @@ -432132,14 +431949,14 @@ pericardio-peritoneal canal - + - + EMAPA @@ -432229,14 +432046,14 @@ - + - + Each of the folds that grow out from the lateral part of the body wall. They fuse and meet with the dorsal and ventral mesentery of the foregut, separating the pleural cavities from the pericardial cavity. In hagfishes a transverse septum extends upward from the ventral body wall posterior to the heart, partly separating an anterior pericardial cavity from a larger peritoneal cavity. (...) These basic relationships have not been modified by urodeles. The small pericardial cavity remains far forward where it is separated by a transverse septum from the principal coelom, which may now be called a pleuroperitoneal cavity because slender lungs are present. (...) The heart [of other tetrapods] is separated from the lungs (and liver if present) by more or less horizontal partitions that have their origin in the embryo as folds on the serous membrane of the right and left lateral body walls. These grow out to join in the midline of the body. They are called lateral mesocardia (birds) or pleuropericardial membranes. Posteriorly they join the transverse septum to form the adult pericardial membrane, or pericardium. (...) In their partitioning of their coelom, embryonic mammals resemble first early fishes (incomplete partition, posterior to heart, consisting of the transverse septum) and then reptiles (pericardium derived from transverse septum and pleuropericardial membranes) Mammals then separate paired pleural cavities from the peritoneal cavity by a diaphragm. The ventral portion of this organ comes from the transverse septum. The dorsal portion is derived from the dorsal mesentery and from still another pair of outgrowths from the lateral body wall, the pleuroperitoneal membranes.[well established][VHOG] As the folds grow towards the midline, carrying the phrenic nerve, the root of the folds migrate ventrally @@ -432252,24 +432069,24 @@ pleuropericardial folds - + - + - + EHDAA2 - + EHDAA2 @@ -432330,7 +432147,7 @@ - + @@ -432355,20 +432172,14 @@ pleuroperitoneal canal - + - - EHDAA2 - - - - - + EHDAA2 @@ -432401,8 +432212,8 @@ - - + + @@ -432423,11 +432234,11 @@ polar trophectoderm - + - + @@ -432440,13 +432251,13 @@ - + EMAPA - + EHDAA2 @@ -432508,7 +432319,7 @@ - + EHDAA2:0001498 EHDAA:818 EMAPA:16242 @@ -432517,14 +432328,14 @@ early vein that gives rise to various sinuses primary head vein - + - + EHDAA2 @@ -432534,8 +432345,8 @@ - - + + @@ -432565,24 +432376,24 @@ The embryonic ventricle or primitive ventricle of the developing heart gives rise to the trabeculated parts of the left and right ventricles. In contrast, the smooth parts of the left and right ventricles originate from the embryological bulbus cordis. The primitive ventricle becomes divided by a septum, the septum inferius or ventricular septum, which grows upward from the lower part of the ventricle, its position being indicated on the surface of the heart by a furrow. Its dorsal part increases more rapidly than its ventral portion, and fuses with the dorsal part of the septum intermedium. For a time an interventricular foramen exists above its ventral portion, but this foramen is ultimately closed by the fusion of the aortic septum with the ventricular septum[WP] future cardiac ventricle - + - + - + ZFA - + EMAPA @@ -432628,7 +432439,7 @@ - + Future brain vesicle that gives rise to telencephalic ventricle/lateral ventricles and 3rd ventricle. The early development of most vertebrate brains is similar (...). The zebrafish neural tube follows the same basic differentiation pattern as the mammalian neural tube (reference 1); The brain develops from three embryonic enlargements of the neural tube, which later differentiate into five regions. A forebrain differentiates into telencephalon and diencephalon. The midbrain, or mesencephalon, remains undivided. The hindbrain divides into the metencephalon and myelencephalon. Cavities within the brain enlarge to form a series of interconnected ventricles (reference 2).[well established][VHOG] DHBA:10595 @@ -432647,14 +432458,14 @@ UBERON:0006284 early prosencephalic vesicle - + - + EHDAA2 @@ -432763,7 +432574,7 @@ - + @@ -432778,14 +432589,14 @@ UBERON:0006286 radius cartilage element - + - + EHDAA2 @@ -432862,7 +432673,7 @@ - + @@ -432878,7 +432689,7 @@ rib cartilage element - + @@ -432891,7 +432702,7 @@ - + EHDAA2 @@ -432919,7 +432730,7 @@ - + @@ -432941,7 +432752,7 @@ rib pre-cartilage condensation - + @@ -432954,7 +432765,7 @@ - + EHDAA2-abduced ZFA @@ -432989,7 +432800,7 @@ - + @@ -433005,14 +432816,14 @@ scapula cartilage element - + - + EHDAA2 @@ -433039,7 +432850,7 @@ - + @@ -433062,14 +432873,14 @@ scapula pre-cartilage condensation - + - + EHDAA2 @@ -433098,7 +432909,7 @@ - + @@ -433113,7 +432924,7 @@ shoulder joint primordium - + @@ -433126,7 +432937,7 @@ - + EHDAA2 @@ -433143,7 +432954,7 @@ - + A dense syncitial-like mesenchymal thickening in the dorsal mesogastrium[ISBN]. the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing spleen[MP]. check difference between splenic and spleen in EMAPA; note that in EHDAA2 the class 'spleen' refers to the mesenchyme UBERON:0009750 @@ -433159,7 +432970,7 @@ spleen primordium - + @@ -433172,7 +432983,7 @@ - + XAO @@ -433231,8 +433042,8 @@ - - + + A stapes endochondral element that is composed primarily of a pre-cartilage condensation. independent of the mesenchymal condensation that will form the otic capsule EHDAA2:0001910 @@ -433244,24 +433055,24 @@ stapes pre-cartilage condensation - + - + - + EHDAA2 - + cranial end DOI:10.1111/j.1469-7580.2005.00441.x EHDAA2 @@ -433292,7 +433103,7 @@ - + EHDAA2:0001912 EHDAA:9565 EMAPA:18345 @@ -433301,7 +433112,7 @@ sternebral bone pre-cartilage condensation - + @@ -433314,7 +433125,7 @@ - + EHDAA2 @@ -433584,7 +433395,7 @@ - + EHDAA:924 EMAPA:16663 RETIRED_EHDAA2:0002089 @@ -433595,14 +433406,14 @@ See: https://github.com/obophenotype/mouse-anatomy-ontology/issues/13 and https://github.com/obophenotype/uberon/issues/693 -- consider merging into trigeminal ganglion, as this complicates the model future trigeminal ganglion - + - + EHDAA2 @@ -433711,14 +433522,14 @@ - + - + Ventral part of the cloacal membrane separating the gut from the fetus external environment. [TFD][VHOG] EHDAA2:0004025 EHDAA:7011 @@ -433731,24 +433542,24 @@ During the 7th week the urorectal septum divides the cloacal membrane into a urogenital membrane (ventrally) and an anal membrane (dorsally) [http://www.embryology.ch/anglais/ugenital/genitexterne01.html] urogenital membrane - + - + - + EHDAA2 - + EHDAA2 @@ -434120,9 +433931,9 @@ - - - + + + Thin, narrow muscle placed near the anterior margin of the floor of the orbit. The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG] @@ -434153,15 +433964,15 @@ inferior oblique extraocular muscle http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png - + - + - + @@ -434174,20 +433985,20 @@ - + dbpedia - + orbital surface of the maxilla lateral to the lacrimal groove dbpedia - + laterally onto the eyeball deep to the lateral rectus by a short flat tendon dbpedia @@ -434269,14 +434080,14 @@ - + - + The superior oblique muscle, or obliquus oculi superior, is a fusiform muscle in the upper, medial side of the orbit whose primary action is downward, lateral rotation of the eye. One of the extraocular muscles, the superior oblique is the only muscle innervated by the trochlear nerve (the fourth cranial nerve). Cranial nerve IV innervated; dorsal in the obliquus group.[AAO] @@ -434306,11 +434117,11 @@ superior oblique extraocular muscle http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png - + - + @@ -434323,13 +434134,13 @@ - + dbpedia - + Outer posterior quadrant of the eyeball dbpedia @@ -434520,7 +434331,7 @@ - + The superior rectus muscle is a muscle in the orbit. It is one of the extraocular muscles. It is innervated by the superior division of the oculomotor nerve (Cranial Nerve III). In the primary position (looking straight ahead), the superior rectus muscle's primary function is elevation, although it also contributes to intorsion and adduction. The ability to rotate the eyeball is common to all vertebrates with well-developed eyes, regardless of the habitat in which they live, so these [extrinsic ocular] muscles tend to be conservative. They change little during the course of evolution.[well established][VHOG] @@ -434549,7 +434360,7 @@ superior rectus extraocular muscle http://upload.wikimedia.org/wikipedia/commons/e/e8/Eyemuscles.png - + @@ -434562,7 +434373,7 @@ - + dbpedia @@ -434776,8 +434587,8 @@ - - + + The superior pharyngeal constrictor muscle is a quadrilateral muscle, thinner and paler than the inferior pharyngeal constrictor muscle and middle pharyngeal constrictor muscle. [WP,unvetted]. The superior constrictor is a muscle that is an integral part of the pharyngeal tube that is attached to the mandible, pterygomandibular raphe, basioccipital bone, pterygoid process and midline raphe and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED] EMAPA:18966 @@ -434798,25 +434609,25 @@ superior pharyngeal constrictor http://upload.wikimedia.org/wikipedia/commons/a/ac/Musculusconstrictorpharyngissuperior.png - + - + - + pharyngeal plexus Wikipedia - + dbpedia @@ -435462,7 +435273,7 @@ - + EMAPA:18047 FMA:20677 MA:0000444 @@ -435471,7 +435282,7 @@ Compare with lesser sac / omental bursa and its cavities / recesses left subhepatic recess - + @@ -435484,7 +435295,7 @@ - + unverified @@ -435620,14 +435431,14 @@ - + - + A small artery that passes through the ring of the stapes; while the stapedial artery is a temporary artery thought to disappear at late embryonic stage in humans, the mouse stapedial artery is complete by E13 and persists into adulthood[MP]. EHDAA2:0001908 @@ -435645,11 +435456,11 @@ stapedial artery - + - + @@ -435662,13 +435473,13 @@ - + EHDAA2 - + EHDAA2 @@ -435941,7 +435752,7 @@ - + The vasa hyaloidea propria and tunica vasculosa lentis are small branches of the hyaloid artery which fill the primary vitreous. EMAPA:18236 FMA:312395 @@ -435949,14 +435760,14 @@ UBERON:0006358 vasa hyaloidea propria - + - + EMAPA @@ -436083,8 +435894,8 @@ - - + + @@ -436098,24 +435909,24 @@ perihilar interstitium - + - + - + MA - + MA @@ -436170,9 +435981,9 @@ - - - + + + Missing definition for term UBERON:0006376. Please replace it using linked reference. https://sourceforge.net/tracker/?func=detail&aid=3123600&group_id=76834&atid=1205376 EMAPA:29671 @@ -436185,34 +435996,34 @@ UBERON:0006376 premacula segment of distal straight tubule - + - + - + - + MA - + MA - + MA @@ -436416,7 +436227,7 @@ - + @@ -436439,7 +436250,7 @@ "Endochondral ossification of the ventromedial portion of the braincase." [AAO:0000040] // "An endochondral bone that is located ventral to the pterosphenoid and dorsal to the parasphenoid. Basisphenoid is a median bone that is usually Y-shaped." [TAO:0000169] basisphenoid bone - + @@ -436452,7 +436263,7 @@ - + cjm @@ -436663,7 +436474,7 @@ - + The unique bone located in the glans penis of most mammals except humans; it is used for copulation and varies in size and shape by species. found in most mammals, with the exception of humans @@ -436679,14 +436490,14 @@ os penis - + - + Wikipedia @@ -436861,7 +436672,7 @@ - + FMA:20676 SCTID:36051002 hepatic recess @@ -436869,14 +436680,14 @@ UBERON:0006442 subhepatic recess - + - + MA-abduced @@ -438619,7 +438430,7 @@ - + B09-18 BIRNLEX:1749 DHBA:10271 @@ -438649,14 +438460,14 @@ UBERON:0006473 Brodmann (1909) area 18 - + - + WP @@ -439673,7 +439484,7 @@ - + Part of the cytoarchitecturally defined frontal region of cerebral cortex. In the human, it occupies the triangular part of the inferior frontal gyrus (human) and, surrounding the anterior horizontal limb of the lateral sulcus (human), a portion of the orbital part of the inferior frontal gyrus (human). Bounded caudally by the anterior ascending limb of the lateral sulcus (human), it borders on the insula in the depth of the lateral sulcus. Cytoarchitectonically it is bounded caudally by the opercular area 44, rostrodorsally by the area 46 of Brodmann (human) and ventrally by the area 47 of Brodmann (human) (Brodmann-1909) (Adapted from Brain Info). Brodmann area 45 (BA45), is part of the frontal cortex in the human brain. Situated on the lateral surface, inferior to BA9 and adjacent to BA46. This area is also known as pars triangular (of the inferior frontal gyrus). In the human, it occupies the triangular part of inferior frontal gyrus (H) and, surrounding the anterior horizontal limb of lateral sulcus (H), a portion of the orbital part of inferior frontal gyrus (H). Bounded caudally by the anterior ascending limb of lateral sulcus (H), it borders on the insula in the depth of the lateral sulcus. In terms of cytoarchitecture, it is bounded caudally by the opercular area 44 (BA44), rostrodorsally by the middle frontal area 46 (BA46), and ventrally by the orbital area 47 (BA47) (Brodmann-1909)[Wikipedia:Brodmann_area_45]. B09-45 @@ -439696,14 +439507,14 @@ UBERON:0006482 Brodmann (1909) area 45 - + - + NIFSTD @@ -440569,7 +440380,7 @@ - + EMAPA:37423 FMA:55348 MA:0001760 @@ -440579,7 +440390,7 @@ UBERON:0006494 apex of arytenoid - + @@ -440592,7 +440403,7 @@ - + MA @@ -440620,7 +440431,7 @@ - + EMAPA:35621 FMA:75666 MA:0001183 @@ -440630,14 +440441,14 @@ Design pattern note: check if conforms to foramen pattern osseus cochlear canal - + - + MA @@ -440801,7 +440612,7 @@ - + The most superior muscles in the sole of the foot that abduct the second to fourth toes. These four muscles also act through the dorsal expansions to resist extension of the metatarsophalangeal joints and flexion of the interphalangeal joints. EMAPA:37517 FMA:37457 @@ -440819,14 +440630,14 @@ dorsal pes interosseous muscle http://upload.wikimedia.org/wikipedia/commons/5/57/Gray446.png - + - + dbpedia @@ -440886,7 +440697,7 @@ - + Any of three muscles with origin from the third, fourth, and fifth metatarsal bones, with insertion to the proximal phalanx of the same toes, with nerve supply from the lateral plantar nerve, and whose action adducts the three lateral toes. EMAPA:37518 FMA:37458 @@ -440903,14 +440714,14 @@ plantar interosseous muscle of pes http://upload.wikimedia.org/wikipedia/commons/2/21/Gray447.png - + - + dbpedia @@ -441049,7 +440860,7 @@ - + Any of the muscles of the autopod region that lie between metacarpal or metatarsal bones. interosseous Wikipedia:Interossei @@ -441059,14 +440870,14 @@ UBERON:0006508 interosseous muscle of autopod - + - + cjm @@ -441089,7 +440900,7 @@ - + Part of what are called the basal ganglia of the brain which consist of the globus pallidus and the ventral pallidum. BAMS:PAL @@ -441104,14 +440915,14 @@ UBERON:0006514 pallidum - + - + MA @@ -441152,7 +440963,7 @@ - + The predominant portion of the globus pallidus in the striatopallidal system, which is defined by connectivity and neurochemical staining. The dorsal pallidum is distinguished from the ventral pallidum by a boundary that is partially defined by the anterior commissure. The remainder of the boundary is indistinct in sections stained for Nissl substance ( Heimer-1995 ). BAMS:PALd BTO:0004376 @@ -441165,7 +440976,7 @@ UBERON:0006516 dorsal pallidum - + @@ -441178,7 +440989,7 @@ - + BTO @@ -442079,8 +441890,8 @@ - - + + An organ system subdivision that is a network of vessels capable of removing accumulating protein and fluid from the interstitial space and returning it to the vascular space. In some species, this network is connected to the immune system via lymph nodes and lymphocyte-producing organs, with the whole being the lymphoid system. consider merging with lymph vasculature @@ -442106,24 +441917,24 @@ lymphatic part of lymphoid system - + - + - + AAO - + FMA MA @@ -443073,7 +442884,7 @@ - + @@ -443087,14 +442898,14 @@ UBERON:0006585 vestibular organ - + - + NIFSTD @@ -443122,7 +442933,7 @@ - + @@ -443142,7 +442953,7 @@ UBERON:0006586 otolymph - + @@ -443155,7 +442966,7 @@ - + Wikipedia:Perilymph @@ -443329,7 +443140,7 @@ - + The round ligament of the uterus originates at the uterine horns, in the parametrium. It leaves the pelvis via the deep inguinal ring, passes through the inguinal canal and continues on to the labia majora where its fibers spread and mix with the tissue of the mons pubis[WP]. A fibromuscular band that attaches to the uterus and then passes along the broad ligament, out through the inguinal ring, and into the labium majus[MESH]. round ligament FMA:20420 @@ -443348,7 +443159,7 @@ round ligament of uterus http://upload.wikimedia.org/wikipedia/commons/7/76/Gray1138.png - + @@ -443361,7 +443172,7 @@ - + lower gubernaculum Wikipedia @@ -443704,14 +443515,14 @@ - + - + Ossified pars articularis of the palatoquadrate cartilage. Endochondral bone that commonly articulates with the ectopterygoid anteriorly, the metapterygoid dorsally, and the symplectic postero-medially. The quadrate is formed from the posterior part of the palatoquadrate cartilage, or pars quadrata. The quadrate is a paired bone.[TAO] @@ -443734,24 +443545,24 @@ quadrate bone - + - + - + AAO - + ZFA @@ -443956,7 +443767,7 @@ - + @@ -443972,14 +443783,14 @@ presumptive enteric nervous system - + - + NCBIBook:NBK10065 @@ -444138,7 +443949,7 @@ - + Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium. Roof between frontoparietal foramen and otic capsules, confluent with taenia tecti marginales.[AAO] relationship loss: part_of braincase and otic capsule skeleton (AAO:0000052)[AAO] @@ -444151,7 +443962,7 @@ UBERON:0006605 tectum synoticum - + @@ -444164,7 +443975,7 @@ - + ZFA @@ -444235,7 +444046,7 @@ - + A cartilaginous joint that connects left and right mandibles/dentary bones. Mandibular symphysis is unpaired[TAO,modified]. this is placed as part of lower jaw region, as in this ontology the skeleton does not include joints Joint that articulates the left and right dentary bones. Mandibular symphysis is unpaired.[TAO] @@ -444258,7 +444069,7 @@ mandibular symphysis http://upload.wikimedia.org/wikipedia/commons/6/64/Gray176.png - + @@ -444271,7 +444082,7 @@ - + connects adjacent mandibles @@ -444641,8 +444452,8 @@ - - + + A sheet of extracellular matrix. Aponeuroses are layers of flat broad tendons. They have a shiny, whitish-silvery color, and are histologically similar to tendons, but are very sparingly supplied with blood vessels and nerves. When dissected, aponeuroses are papery, and peel off by sections. The primary regions with thick aponeurosis is in the ventral abdominal region, the dorsal lumbar region, and in the palmar region. Their primary function is to join muscles and the body parts the muscles act upon[Wikipedia:Aponeurosis]. in ZFA, aponeuroses are subtypes of tendons, but this is inconsistent with tendons being muscle-bone connections @@ -444661,11 +444472,11 @@ aponeurosis http://upload.wikimedia.org/wikipedia/commons/e/e6/Aponeurosis.png - + - + @@ -444678,13 +444489,13 @@ - + FMA - + AEO @@ -445228,7 +445039,7 @@ - + @@ -445251,7 +445062,7 @@ coracoid process of scapula http://upload.wikimedia.org/wikipedia/commons/a/a6/Gray205_left_scapula_lateral_view.png - + @@ -445264,7 +445075,7 @@ - + EMAPA FMA @@ -445943,7 +445754,7 @@ - + The dense fibrous connective tissue layer that covers the testis. The layer of connective tissue covering the testicles. [Wikipedia_(15/09/09)][VHOG] The tunica albuginea testis is the major component of the capsule of mammalian testes. (...) Our results from studying the mole provide evidence that the spatio-temporal pattern of testis development is not perfectly conserved in mammals, since we found differences with respect to the mouse testis organogenesis. This fact is even more significant when we consider that, apart from the mouse, the mole is probably the one of the best-known mammalian species in terms of the genetic control of testis development, implying that more peculiarities would be found if more species were investigated.[uncertain][VHOG] @@ -445965,14 +445776,14 @@ UBERON:0006643 tunica albuginea of testis - + - + EHDAA2 @@ -446319,9 +446130,9 @@ - - - + + + @@ -446341,15 +446152,15 @@ Some sources consider it a part of the broad ligament of uterus[2] while other sources just consider it a "termination" of the ligament.[3] suspensory ligament of ovary - + - + - + @@ -446362,19 +446173,19 @@ - + FMA-modified - + Wikipedia - + Wikipedia @@ -446404,14 +446215,14 @@ - + - + The outer coelomic epithelial covering of the testis; a sac of serous tissue covering the testis and the epididymis within which the testis can move about; it covers the tunica albuginea. The tunica vaginalis is the serous covering of the testis. It is a pouch of serous membrane, derived from the saccus vaginalis of the peritoneum, which in the fetus preceded the descent of the testis from the abdomen into the scrotum. After its descent, that portion of the pouch which extends from the abdominal inguinal ring to near the upper part of the gland becomes obliterated; the lower portion remains as a shut sac, which invests the surface of the testis, and is reflected on to the internal surface of the scrotum; hence it may be described as consisting of a visceral and a parietal lamina. tunica vaginalis testis has two layers: visceral and parietal; the visceral layer lies on the anterolateral surface of the testis and epididymis; the parietal layer lines the inner surface of the scrotal sac @@ -446435,11 +446246,11 @@ tunica vaginalis testis http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray1148.png - + - + @@ -446452,13 +446263,13 @@ - + EMAPA - + Wikipedia @@ -446524,9 +446335,9 @@ - - - + + + The appendix testis is a vestigial remnant of the Mullerian duct, present on the upper pole of the testis and attached to the tunica vaginalis. It is present about 90% of the time. the label hydatid of morgagni is ambiguous w.r.t male vs female. The ncita structure 'hydatic of morgani' is male and thus belongs here. a cystlike remnant of the müllerian duct on the upper end of the testis; corresponding female structure: one of the small pedunculated structures attached to the uterine tubes near their fimbriated end; remnants of the mesonephric ducts[http://medical-dictionary.thefreedictionary.com/]. @@ -446552,34 +446363,34 @@ appendix testis http://upload.wikimedia.org/wikipedia/commons/4/4d/Gray1148.png - + - + - + - + EMAPA - + cjm - + Wikipedia @@ -446729,7 +446540,7 @@ - + Erectile tissue at the end of the clitoris, which is continuous with the intermediate part of the vestibulovaginal bulbs[BTO]. The clitoral glans (glans clitoridis) is an external portion of the clitoris[WP]. BTO:0003117 EMAPA:30829 @@ -446746,14 +446557,14 @@ glans clitoris http://upload.wikimedia.org/wikipedia/commons/8/8c/Clitoris_inner_anatomy.gif - + - + cjm @@ -446944,7 +446755,7 @@ - + @@ -446967,14 +446778,14 @@ deep dorsal vein of penis - + - + FMA/obol @@ -446996,7 +446807,7 @@ - + Anatomical cavity for the proximal articular surface of the proximal limb or fin element with the scapulocoracoid or equivalent structure. Cavity for the articulation of the forelimb formed by the scapula, coracoid, and clavicle.[AAO] relationship loss: part_of scapular area (AAO:0000935)[AAO] @@ -447022,14 +446833,14 @@ glenoid fossa http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray328.png - + - + to be revised after scapulocoracoid fixes @@ -447138,8 +446949,8 @@ - - + + A joint that connects one phalanx to another along a proximodistal axis. Hinge joints between the phalanges of the hand or foot[ncithesaurus:Interphalangeal_Joint]. EMAPA:37884 @@ -447152,24 +446963,24 @@ interphalangeal joint - + - + - + cjm - + two phalanges in series @@ -447360,7 +447171,7 @@ - + The galea aponeurotica (epicranial aponeurosis, aponeurosis epicranialis) is a tough layer of dense fibrous tissue which covers the upper part of the cranium; behind, it is attached, in the interval between its union with the Occipitales, to the external occipital protuberance and highest nuchal lines of the occipital bone; in front, it forms a short and narrow prolongation between its union with the Frontales. On either side it gives origin to the Auriculares anterior and superior; in this situation it loses its aponeurotic character, and is continued over the temporal fascia to the zygomatic arch as a layer of laminated areolar tissue. It is closely connected to the integument by the firm, dense, fibro-fatty layer which forms the superficial fascia of the scalp: it is attached to the pericranium by loose cellular tissue, which allows the aponeurosis, carrying with it the integument to move through a considerable distance. EMAPA:19210 FMA:46768 @@ -447380,14 +447191,14 @@ epicranial aponeurosis http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png - + - + FMA @@ -447522,8 +447333,8 @@ - - + + The hemiazygos vein (vena azygos minor inferior) is a vein running superiorly in the lower thoracic region, just to the left side of the vertebral column. The major anatomic variation between the pig and other mammalian species is the presence of the large left azygos vein, which enters the coronary sinus (Fig. 1). In other mammals, hemiazygos vein enters the pre- cava. @@ -447544,24 +447355,24 @@ hemiazygos vein http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray480.png - + - + - + ISBN:0443065837 - + FMA/obol @@ -447666,7 +447477,7 @@ - + The accessory hemiazygos vein (vena azygos minor superior) is a vein on the left side of the vertebral column that generally drains the fifth through eighth intercostal spaces on the left side of the body[WP]. TODO - add superclass @@ -447683,14 +447494,14 @@ accessory hemiazygos vein http://upload.wikimedia.org/wikipedia/commons/3/3e/Gray480.png - + - + FMA/obol @@ -447924,7 +447735,7 @@ - + @@ -447947,14 +447758,14 @@ alveolar canal http://upload.wikimedia.org/wikipedia/commons/7/71/Gray157.png - + - + EMAPA @@ -447979,14 +447790,14 @@ - + - + The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers. In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm's apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG] EMAPA:17702 @@ -448003,24 +447814,24 @@ central tendon of diaphragm - + - + - + VHOG - + definitional @@ -448085,7 +447896,7 @@ - + A fat pad that is part of a orbital region. EMAPA:19152 FMA:59005 @@ -448099,14 +447910,14 @@ UBERON:0006671 orbital fat pad - + - + inferred @@ -448158,7 +447969,7 @@ - + @@ -448175,14 +447986,14 @@ Design pattern notes: see also incisive duct and foramen incisive canal - + - + EMAPA @@ -448870,7 +448681,7 @@ - + On the lower surface of the basilar part of occipital bone, about 1 cm. in front of the foramen magnum, is the pharyngeal tubercle which gives attachment to the fibrous raphC) of the pharynx, also known as the pharyngeal raphe. This is the point of attachment for the superior pharyngeal constrictor muscle. EMAPA:19250 FMA:75746 @@ -448878,7 +448689,7 @@ UBERON:0006685 pharyngeal tubercle - + @@ -448891,7 +448702,7 @@ - + EMAPA @@ -448968,7 +448779,7 @@ - + The median sacral vein (or middle sacral veins) accompany the corresponding artery along the front of the sacrum, and join to form a single vein, which ends in the left common iliac vein; sometimes in the angle of junction of the two iliac veins. EMAPA:26064 @@ -448980,14 +448791,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + FMA/obol @@ -449144,7 +448955,7 @@ - + The deep dorsal vein of clitoris is a vein which drains to the vesical plexus. EMAPA:19218 @@ -449155,14 +448966,14 @@ deep dorsal vein of clitoris - + - + FMA/obol @@ -449782,7 +449593,7 @@ - + @@ -449816,14 +449627,14 @@ foramen cecum of tongue https://upload.wikimedia.org/wikipedia/commons/a/a3/Foramen_caecum.png - + - + EHDAA2 @@ -449940,7 +449751,7 @@ - + @@ -449962,14 +449773,14 @@ UBERON:0006714 tibiofibula - + - + AAO @@ -450076,7 +449887,7 @@ - + @@ -450105,14 +449916,14 @@ UBERON:0006716 mesopodium region - + - + MA:th @@ -450230,7 +450041,7 @@ - + The medial pterygoid is a pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors and is innervated by the nerve to the medial pterygoid and attaches to the cranial base and the medial side of the mandibular angle. @@ -450260,14 +450071,14 @@ medial pterygoid muscle http://upload.wikimedia.org/wikipedia/commons/e/ec/Musculuspterygoideusmedialis.png - + - + MFMO @@ -450386,8 +450197,8 @@ - - + + Pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors, is innervated by the lateral pterygoid nerve branches, and attaches to the condylar process of the mandible and temporomandibular joint (TMJ) capsule, and the cranial base. Pharyngeal arch 1 muscle that participates in oral/pharyngeal behaviors, is innervated by the lateral pterygoid nerve branches, and attaches to the condylar process of the mandible and TMJ capsule, and the cranial base.[FEED] @@ -450421,25 +450232,25 @@ https://github.com/obophenotype/uberon/issues/539 http://upload.wikimedia.org/wikipedia/commons/b/bb/Musculuspterygoideuslateralis.png - + - + - + Great wing of sphenoid and pterygoid plate dbpedia - + dbpedia @@ -450570,7 +450381,7 @@ - + We use this class to group the medial and lateral pterygoids of mammals as well as the pterygoideus of amphibians and reptiles. Note that FEED includes a distinct class for the reptilian pterygoideus. In future, this branch of the ontology may be refined to include a more complete classification of jaw adductors across gnathostomes. See for example DOI:10.1134/S1062359010090050 AAO:0010730 EMAPA:25139 @@ -450584,14 +450395,14 @@ pterygoid muscle - + - + generalized dbpedia @@ -450625,9 +450436,9 @@ - - - + + + @@ -450661,15 +450472,15 @@ alisphenoid bone http://upload.wikimedia.org/wikipedia/commons/3/35/Gray145.png - + - + - + @@ -450682,19 +450493,19 @@ - + MA - + FMA-abduced-lr - + ISBN:1588903958 @@ -450776,7 +450587,7 @@ - + @@ -450800,14 +450611,14 @@ manubrium of malleus - + - + cjm @@ -450877,7 +450688,7 @@ - + @@ -450905,14 +450716,14 @@ cochlear modiolus http://upload.wikimedia.org/wikipedia/commons/1/16/Gray921.png - + - + MA @@ -450968,7 +450779,7 @@ - + The osseous spiral lamina is a bony shelf or ledge which projects from the modiolus into the interior of the canal, and, like the canal, takes two-and-three-quarter turns around the modiolus. It reaches about half-way toward the outer wall of the tube, and partially divides its cavity into two passages or scalae, of which the upper is named the scala vestibuli, while the lower is termed the scala tympani. EMAPA:35622 FMA:77710 @@ -450986,14 +450797,14 @@ UBERON:0006724 osseus spiral lamina - + - + FMA @@ -451053,7 +450864,7 @@ - + A spiral thickening of the fibrous lining of the cochlear wall. Spiral ligament secures the membranous cochlear duct to the bony spiral canal of the cochlea. Its spiral ligament fibrocytes function in conjunction with the stria vascularis to mediate cochlear ion homeostasis. this is not classified as a ligament in FMA UBERON:0028186 @@ -451073,14 +450884,14 @@ spiral ligament - + - + MESH-def @@ -451614,7 +451425,7 @@ - + Mammals typically have four parathyroids, while other groups typically have six EHDAA2:0001954 @@ -451630,14 +451441,14 @@ superior parathyroid gland - + - + FMA-abduced-lr @@ -451667,9 +451478,9 @@ - - - + + + Mammals typically have four parathyroids, while other groups typically have six EHDAA2:0000821 EHDAA:3864 @@ -451685,34 +451496,34 @@ inferior parathyroid gland - + - + - + - + FMA-abduced-lr - + http://emedicine.medscape.com/article/845125-overview - + epithelium EHDAA2 @@ -451747,7 +451558,7 @@ - + @@ -451771,14 +451582,14 @@ median lingual swelling http://upload.wikimedia.org/wikipedia/commons/5/5c/Gray979.png - + - + EHDAA2 @@ -452016,7 +451827,7 @@ - + @@ -452029,7 +451840,7 @@ - + The zonule of Zinn (Zinn's membrane, ciliary zonule) is a ring of fibrous strands connecting the ciliary body with the crystalline lens of the eye. The zonule of Zinn is split into two layers: a thin layer, which lines the hyaloid fossa, and a thicker layer, which is a collection of zonular fibers. Together, the fibers are known as the suspensory ligament of the lens[WP]. Modified or toughened vitreous that suspend the lens at the equator to the non-pigmented epithelium of the ciliary zone. In zebrafish, dorsal zonules are thickened as compared to ventral zonules. In both dorsal and ventral regions, these fibers delimit the vitreous body aqueous humor boundary[ZFA]. FMA:58838 @@ -452053,11 +451864,11 @@ suspensory ligament of lens http://upload.wikimedia.org/wikipedia/commons/1/1e/Schematic_diagram_of_the_human_eye_en.svg - + - + @@ -452070,13 +451881,13 @@ - + FMA - + ZFA @@ -452157,13 +451968,21 @@ - + + + + - + + + + + + Layer of nonkeratinized squamous epithelium lining the conjunctiva, overlying scleral tissue. BTO:0005131 @@ -452179,22 +451998,12 @@ epithelium of conjunctiva - - - - FMA - - - - - BTO - @@ -453854,7 +453663,7 @@ - + A nerve that transmits nerve impulses from the central nervous system to effectors such as muscles or glands. AEO:0000202 @@ -453868,14 +453677,14 @@ UBERON:0006798 efferent nerve - + - + AEO @@ -454104,7 +453913,7 @@ - + @@ -454132,14 +453941,14 @@ obturator foramen http://upload.wikimedia.org/wikipedia/commons/f/ff/Skeletpelvis-pubis.jpg - + - + AAO @@ -454352,7 +454161,7 @@ - + A bony projection on the distal epiphysis of the humerus that is the attachment site for the flexor muscles of the manus. This condyle faces posteriorly (for sprawling tetrapods) or medially (for erect tetrapods). Rounded projection at the distal head of the humerus and medial to the humeral head, which serves as a place of attachment for the flexor muscles antogonistic to those that attach to the lateral epicondyle.[AAO] entepicondylar @@ -454374,14 +454183,14 @@ entepicondyle of humerus http://upload.wikimedia.org/wikipedia/commons/6/6c/Gray329-Medial_epicondyle_of_the_humerus.png - + - + FMA @@ -454458,7 +454267,7 @@ - + A bony projection on the distal epiphysis of the humerus that is the attachment site for the extensor muscles of the distal parts of the forelimb. In humans, this is known as the lateral epicondyle, but the position varies across tetrapods. Rounded projection at the distal head of the humerus (larger and more prominent than the lateral epicondyle) and lateral to the humeral head, which serves as a place of attachment for the mm extensor antebrachii et carpi radialis, extensor digitorum communis, and in part to the m extensor antebrachii et carpi ulnaris.[AAO] @@ -454480,14 +454289,14 @@ ectepicondyle of humerus http://upload.wikimedia.org/wikipedia/commons/c/c6/Gray420.png - + - + FMA @@ -454801,7 +454610,7 @@ - + @@ -454817,7 +454626,7 @@ nasal skeleton - + @@ -454830,7 +454639,7 @@ - + facial series Kardong-abduced @@ -454859,7 +454668,7 @@ - + @@ -454879,7 +454688,7 @@ UBERON:0006815 areolar connective tissue - + @@ -454892,7 +454701,7 @@ - + FMA @@ -456001,7 +455810,7 @@ - + A raised area of the biting surface of a tooth. this class may be obsoleted and split - the TAO class is generic, the mammalian class refers specifically to a molariform tooth Anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth.[TAO] @@ -456019,7 +455828,7 @@ cusp of tooth - + @@ -456032,7 +455841,7 @@ - + FMA @@ -456233,7 +456042,7 @@ - + @@ -456247,14 +456056,14 @@ UBERON:0006848 posterior pretectal nucleus - + - + ISBN:0471888893 @@ -456307,8 +456116,8 @@ - - + + @@ -456356,24 +456165,24 @@ scapula https://upload.wikimedia.org/wikipedia/commons/5/59/Pectoral_girdles-en.svg - + - + - + ZFA - + definitional @@ -456528,12 +456337,20 @@ - + + + + - + + + + + + A region of nephron tubule that is part of a cortex of kidney. EMAPA:18976 MA:0002609 @@ -456542,16 +456359,6 @@ UBERON:0006853 renal cortex tubule - - - - - - - - - MA - @@ -456577,8 +456384,8 @@ - - + + https://sourceforge.net/tracker/?func=detail&aid=3123598&group_id=76834&atid=1205376 EMAPA:28402 MA:0002615 @@ -456589,24 +456396,24 @@ UBERON:0006854 distal straight tubule postmacula segment - + - + - + MA - + MA @@ -456651,7 +456458,7 @@ - + A muscular coat that is part of a ureter. FMA:15893 MA:0002654 @@ -456665,14 +456472,14 @@ UBERON:0006855 muscular coat of ureter - + - + FMA @@ -456730,9 +456537,9 @@ - - - + + + Structures in fishes homologous to the cortical tissue of the mammalian adrenal gland; they are in close proximity to or imbedded in the head kidney. check isa - not a true gland? There are two types of interrenal cells identified (1) The noradrenaline type, which contain heterogeneous vesicles with electron-dense granules located asymmetrically within the vesicular membrane. (2) The adrenaline type, in which the vesicles are smaller and contain homogenous electron-lucent granules that are separated from the vesicular membrane by a visible -- halo http://dev.biologists.org/content/130/10/2107.full An epithelial structure consisting of steroid producing cells interposed with chromaffin cells embedded within the head kidney. The interrenal gland is thought to be the equivalent of the mammalian adrenal cortex in zebrafish. Hsu et al. 2003.[TAO] @@ -456751,34 +456558,34 @@ interrenal gland - + - + - + - + ZFA - + ZFA - + DOI:10.1242/dev.00427 @@ -457294,7 +457101,7 @@ - + A metaphysis that is part of a femur. EMAPA:37540 FMA:32875 @@ -457304,14 +457111,14 @@ metaphysis of femur - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -457532,7 +457339,7 @@ - + @@ -457545,7 +457352,7 @@ - + @@ -457567,24 +457374,24 @@ Dumont, et al. question whether the endostyle in ammocetes is homologous with that of the urochordates and cephalochordates[WP]. endostyle - + - + - + http://webs.lander.edu/rsfox/invertebrates/ammocoetes.html - + Wikipedia:Endostyle @@ -457963,7 +457770,7 @@ - + A head mesenchyme that develops_from a mesoderm. merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme AAO:0011051 @@ -457990,20 +457797,14 @@ head mesenchyme from mesoderm - + - - ZFA - - - - - + EHDAA2 XAO @@ -458098,7 +457899,7 @@ - + @@ -458120,14 +457921,14 @@ ala of nose http://upload.wikimedia.org/wikipedia/commons/e/e1/Gray852.png - + - + FMA-abduced-lr @@ -459282,13 +459083,21 @@ - + + + + - - + + + + + + + @@ -459304,11 +459113,7 @@ crista ampullaris neuroepithelium - - - - - + @@ -459321,13 +459126,7 @@ - - MA - - - - - + FMA @@ -459479,7 +459278,7 @@ - + @@ -459524,14 +459323,14 @@ efferent duct http://upload.wikimedia.org/wikipedia/commons/b/b5/Hodenschema.svg - + - + FMA @@ -459591,7 +459390,7 @@ - + @@ -459617,14 +459416,14 @@ male genital duct - + - + FMA-abduced-lr @@ -460334,7 +460133,7 @@ - + The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis. CALOHA:TS-1246 @@ -460355,14 +460154,14 @@ ovary stroma - + - + FMA @@ -460422,7 +460221,7 @@ - + The distal part of adenohypophysis: the part that makes up the main body of the gland. Region of the adenohypophysis which produces the follicle-stimulating hormone, luteinizing hormone, prolactin, thyrotropin, and adrenocorticotropin.[AAO] The anterior part of the adenohypophysis. [TFD][VHOG] @@ -460461,7 +460260,7 @@ pars distalis of adenohypophysis - + @@ -460474,7 +460273,7 @@ - + MA @@ -460849,6 +460648,7 @@ An exceretory tubule that usually opens to the exterior by a nephridiopore. The inner end of the tubule may be blind, ending in flame cells (protonephridium) or may open into the coelom through a ciliated funnel (metanephridium). BTO:0000923 Wikipedia:Nephridium + nephridia UBERON:0006972 nephridium @@ -460858,6 +460658,13 @@ An exceretory tubule that usually opens to the exterior by a nephridiopore. The inner end of the tubule may be blind, ending in flame cells (protonephridium) or may open into the coelom through a ciliated funnel (metanephridium). Wikipedia:Nephridium + + + + nephridia + http://orcid.org/0000-0002-6601-2165 + + @@ -461586,7 +461393,7 @@ - + Cranial neural crest that migrates into the mandibular arch. TAO:0007064 XAO:0000024 @@ -461594,7 +461401,7 @@ UBERON:0007098 mandibular neural crest - + @@ -461607,7 +461414,7 @@ - + ZFA @@ -461623,7 +461430,7 @@ - + Cranial neural crest that migrates into the hyoid arch. TAO:0007065 XAO:0000025 @@ -461632,7 +461439,7 @@ UBERON:0007099 hyoid neural crest - + @@ -461645,7 +461452,7 @@ - + ZFA @@ -461670,7 +461477,10 @@ - + + + + @@ -461681,7 +461491,12 @@ - + + + + + + A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis @@ -461695,16 +461510,6 @@ Gene notes: Bmp, Nkx, Gata primary circulatory organ - - - - - - - - - GO uses blood circulation generically to include the haemolymphatic fluid of arthropods - @@ -461803,8 +461608,8 @@ - - + + One of the minute vascular projections of the fetal chorion that combines with maternal uterine tissue to form the placenta. The mouse and human placentas have labyrinthine and villous types of interdigitation between maternal and fetal tissues, respectively The bulk of the villi consist of connective tissues in which blood vessels are found. Most of the cells in the connective tissue core of the villi are fibroblasts. Macrophages known as Hofbauer cells are also present. @@ -461831,24 +461636,24 @@ chorionic villus http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray29.png - + - + - + BTO - + MP-def @@ -461939,7 +461744,7 @@ - + @@ -461957,14 +461762,14 @@ UBERON:0007108 vernix caseosa - + - + MP @@ -463694,7 +463499,7 @@ - + Teleost head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis[ZFA,modified]. The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. Davidson and Zon 2004.[TAO] @@ -463709,14 +463514,14 @@ head kidney - + - + cjm @@ -464173,7 +463978,7 @@ - + A spinal artery that arises from the vertebral artery, adjacent to the medulla oblongata[WP,modified]. EMAPA:18243 @@ -464187,14 +463992,14 @@ posterior spinal artery - + - + EHDAA2 @@ -464412,7 +464217,7 @@ - + A valve leafleft that is part of a mitral valve. Leaf of cardiac valve which has as its parts the anterior, and posterior leaflets that is attached to the chorda tendinea of left ventricle and to the frbrous ring of mitral valve. The mature AV (atrioventricular) valve of the adult zebrafish 2-chambered heart is structurally similar to the mammalian AV valves with stratified ECM (extracellular matrix) and supporting chordae tendineae. Therefore, the major cellular and molecular events of valve development are largely conserved among animals with hearts composed of multiple chambers.[uncertain][VHOG] @@ -464428,14 +464233,14 @@ mitral valve leaflet - + - + FMA-abduced @@ -464656,7 +464461,7 @@ - + A vein that drains into the internal thoracic vein, anastomosing with the inferior epigastric vein at the level of the umbilicus and drains the anterior part of the abdominal wall and some of the diaphragm. Along its course, it is accompanied by a similarly named artery, the superior epigastric artery. EMAPA:18761 @@ -464668,14 +464473,14 @@ superior epigastric vein - + - + FMA/obol @@ -465476,7 +465281,7 @@ - + The medial border of the scapula (vertebral border, medial margin) is the longest of the three borders, and extends from the medial to the inferior angle. It is arched, intermediate in thickness between the superior and the axillary borders, and the portion of it above the spine forms an obtuse angle with the part below. This border presents an anterior and a posterior lip, and an intermediate narrow area. The anterior lip affords attachment to the Serratus anterior; the posterior lip, to the Supraspinatus above the spine, the Infraspinatus below; the area between the two lips, to the Levator scapulC& above the triangular surface at the commencement of the spine, to the Rhomboideus minor on the edge of that surface, and to the Rhomboideus major below it; this last is attached by means of a fibrous arch, connected above to the lower part of the triangular surface at the base of the spine, and below to the lower part of the border. consider merging with UBERON:1500000 scapular blade, depending on https://github.com/obophenotype/uberon/issues/339. See also http://www.ncbi.nlm.nih.gov/pubmed/20136669 @@ -465496,7 +465301,7 @@ medial border of scapula - + @@ -465509,7 +465314,7 @@ - + PMID:20136669 @@ -466428,7 +466233,7 @@ - + The structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells. UBERON:0004102 @@ -466444,14 +466249,14 @@ tracheobronchial tree - + - + Wikipedia @@ -466717,7 +466522,6 @@ - @@ -466828,7 +466632,6 @@ - @@ -466989,7 +466792,6 @@ - @@ -467273,14 +467075,14 @@ - + - + One of two subdivisions of the entorhinal cortex, located laterally. LEC BAMS:ENTl @@ -467298,24 +467100,24 @@ Connectivity notes: The lateral entorhinal cortex, for example, is strongly connected to the perirhinal cortex, olfactory and insular cortex and the amygdala.[http://www.scholarpedia.org/article/Entorhinal_cortex] lateral entorhinal cortex - + - + - + MA - + MA @@ -467626,7 +467428,6 @@ - @@ -467688,7 +467489,6 @@ - @@ -467768,7 +467568,6 @@ - @@ -467838,7 +467637,7 @@ - + relationship to Meckel's cartilage to be added Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] EHDAA2:0000031 @@ -467851,14 +467650,14 @@ UBERON:0007237 1st arch mandibular component - + - + EHDAA2 @@ -467896,7 +467695,7 @@ - + relationship to palatoquadrate to be added Subsequent vertebrate evolution has also involved major alterations to the pharynx; perhaps the most notable occurred with the evolution of the gnathostomes. This involved substantial modifications to the most anterior pharyngeal segments, with the jaw forming from the first, anterior, pharyngeal segment, while the second formed its supporting apparatus, the hyoid.[well established][VHOG] EHDAA2:0000038 @@ -467905,14 +467704,14 @@ UBERON:0007238 1st arch maxillary component - + - + EHDAA2 @@ -468009,7 +467808,7 @@ - + A tunica adventitia that is part of a artery. EMAPA:36295 EV:0100030 @@ -468020,14 +467819,14 @@ UBERON:0007240 tunica adventitia of artery - + - + FMA @@ -468441,7 +468240,7 @@ - + The lymph tissue on the floor of the oropharyngeal passage, near the root of the tongue. FMA:54836 @@ -468458,14 +468257,14 @@ lingual tonsil https://upload.wikimedia.org/wikipedia/commons/4/4c/Illu04_tongue.jpg - + - + FMA-abduced-lr @@ -469198,21 +468997,21 @@ - + A pre-cartilage condensation that is part of a trachea. EHDAA2:0002070 EHDAA:7082 UBERON:0007267 trachea pre-cartilage rings - + - + EHDAA2 @@ -469538,7 +469337,7 @@ - + A crista ampullaris neuroepithelium that is part of a anterior semicircular duct. TODO - unvetted @@ -469559,14 +469358,14 @@ crista of ampulla of anterior semicircular duct of membranous laybrinth - + - + Phenoscape @@ -469874,8 +469673,8 @@ - - + + @@ -469901,24 +469700,24 @@ presumptive hindbrain - + - + - + XAO-abduced - + cjm @@ -469975,7 +469774,7 @@ - + @@ -469988,14 +469787,14 @@ UBERON:0007278 presumptive sinus venosus - + - + ZFA @@ -470134,7 +469933,7 @@ - + @@ -470152,14 +469951,14 @@ presumptive midbrain hindbrain boundary - + - + ZFA @@ -470198,7 +469997,7 @@ - + @@ -470214,14 +470013,14 @@ presumptive segmental plate - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest EDHAA2 @@ -470364,7 +470163,7 @@ - + @@ -470389,7 +470188,7 @@ presumptive paraxial mesoderm - + @@ -470405,7 +470204,7 @@ - + https://github.com/obophenotype/uberon/issues/1277 @@ -471220,33 +471019,33 @@ - - + + A glomerular capillary that is part of a pronephros. TAO:0005309 ZFA:0005309 UBERON:0007306 pronephric glomerular capillary - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -471273,7 +471072,7 @@ - + A glomerular basement membrane that is part of a pronephros. TAO:0005313 ZFA:0005313 @@ -471281,14 +471080,14 @@ UBERON:0007307 pronephric glomerular basement membrane - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -471458,7 +471257,7 @@ - + @@ -471486,14 +471285,14 @@ internal pudendal artery http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png - + - + FMA-abduced-lr @@ -471555,8 +471354,8 @@ - - + + @@ -471576,24 +471375,24 @@ deep external pudendal artery http://upload.wikimedia.org/wikipedia/commons/4/43/Gray549.png - + - + - + FMA - + FMA @@ -471642,7 +471441,7 @@ - + @@ -471670,14 +471469,14 @@ superficial external pudendal artery http://upload.wikimedia.org/wikipedia/commons/4/43/Gray549.png - + - + FMA @@ -471897,7 +471696,7 @@ - + @@ -471942,7 +471741,7 @@ pancreatic duct http://upload.wikimedia.org/wikipedia/commons/1/15/Gray1100.png - + @@ -471955,7 +471754,7 @@ - + MA @@ -472600,7 +472399,7 @@ - + @@ -472631,7 +472430,7 @@ proventriculus - + @@ -472644,7 +472443,7 @@ - + Wikipedia @@ -473852,8 +473651,8 @@ - - + + Midline nuclei found in the midbrain, includes the dorsal raphe nucleus and the rostral linear nucleus of raphe. TODO - check. note BTO class is placed here as it is placed in hindbrain @@ -473874,24 +473673,24 @@ UBERON:0007412 midbrain raphe nuclei - + - + - + NIFSTD - + Wikipedia @@ -474250,34 +474049,26 @@ - + + + + - + + + + + + A neural decussation that is part of a diencephalon. FMA:62446 diencephalon decussation UBERON:0007425 decussation of diencephalon - - - - - - - - - FMA - - - - - - Obol - @@ -474297,7 +474088,7 @@ - + The stratum intermedium in a developing tooth is a layer of two or three cells between the inner enamel epithelium and the newly forming cells of the stellate reticulum. It first appears during the early bell stage of tooth development, at around the 14th week of intrauterine life (in humans). The stratum intermedium has a notably high alkaline phosphatase activity. This layer, along with the inner enamel epithelium, is responsible for the tooth enamel formation. It is a part of the dental (enamel) organ. stratum intermedium BTO:0005009 @@ -474307,14 +474098,14 @@ UBERON:0007440 stratum intermedium of tooth - + - + BTO @@ -474626,7 +474417,7 @@ - + A collection of connected epithelial tubes with a single portal. AEO:0000117 EHDAA2:0003117 @@ -474634,7 +474425,7 @@ UBERON:0007501 arborizing epithelial duct system - + @@ -474647,7 +474438,7 @@ - + AEO @@ -474670,14 +474461,14 @@ - + A complex of interlinking epithelial tubules. AEO:0000118 EHDAA2:0003118 UBERON:0007502 epithelial plexus - + @@ -474690,7 +474481,7 @@ - + AEO @@ -474804,14 +474595,14 @@ - + Mesenchyme with little extracellular matrix. AEO:0000146 EHDAA2:0003146 UBERON:0007524 dense mesenchyme tissue - + @@ -474824,7 +474615,7 @@ - + AEO @@ -474840,19 +474631,19 @@ - - + + Mesenchyme whose cells are embedded in obvious amounts of extracellular matrix. AEO:0000151 EHDAA2:0003151 UBERON:0007529 loose mesenchyme tissue - + - + @@ -474865,13 +474656,13 @@ - + AEO - + AEO @@ -475044,7 +474835,7 @@ - + Part of the regeneration epithelium closest to the fin.[TAO] TAO:0005148 @@ -475054,7 +474845,7 @@ UBERON:0007574 apical epidermal cap - + @@ -475067,7 +474858,7 @@ - + ZFA @@ -475134,12 +474925,6 @@ MA - - - - - FMA - @@ -475228,12 +475013,6 @@ UBERON:0007592 ciliated columnar epithelium - - - - - FMA - @@ -475380,12 +475159,6 @@ UBERON:0007606 ciliated stratified columnar epithelium - - - - - FMA - @@ -475446,9 +475219,9 @@ - - - + + + A muscle on the back of the forearm that extends the fingers and wrist. BTO:0001343 EMAPA:36191 @@ -475465,15 +475238,15 @@ extensor digitorum communis http://upload.wikimedia.org/wikipedia/commons/e/e9/Extensor_digitorum_muscle.png - + - + - + @@ -475486,20 +475259,20 @@ - + extensor expansion of middle and distal phalanges of the 2nd 3rd 4th and 5th fingers dbpedia - + dbpedia - + dbpedia @@ -475535,7 +475308,7 @@ - + EMAPA:36192 MA:0002294 @@ -475546,7 +475319,7 @@ Origin distal to extensor digitorum communis. The part of this muscle that gives a tendon to the 5th digit is comparable to the extensor digiti quinti proprius of the human [ISBN:9780716717553] extensor digitorum lateralis muscle - + @@ -475559,7 +475332,7 @@ - + ISBN:9780716717553 @@ -475587,8 +475360,8 @@ - - + + The extensor minimi digiti (extensor digiti quinti proprius) is a slender muscle of the forearm, placed on the ulnar side of the Extensor digitorum communis, with which it is generally connected. It arises from the common Extensor tendon by a thin tendinous slip, from the intermuscular septa between it and the adjacent muscles. Its tendon runs through a compartment of the dorsal carpal ligament behind the distal radio-ulnar joint, then divides into two as it crosses the manus, and finally joins the expansion of the Extensor digitorum communis tendon on the dorsum of the first phalanx of the little finger[WP]. FMA:38503 @@ -475604,11 +475377,11 @@ extensor digiti minimi muscle http://upload.wikimedia.org/wikipedia/commons/1/15/Gray424.png - + - + @@ -475621,14 +475394,14 @@ - + the anterior portion of the lateral epicondyle of the humerus dbpedia - + at the extensor expansion located at the base of the proximal phalanx of digit V on the dorsal side dbpedia @@ -475724,7 +475497,7 @@ - + @@ -475743,14 +475516,14 @@ UBERON:0007616 layer of synovial tissue - + - + BTO @@ -475870,28 +475643,26 @@ - + + + + - + + + + + + A synovial cavity of joint that is part of a hip joint. EMAPA:19021 FMA:9701 UBERON:0007618 synovial cavity of hip joint - - - - - - - - - FMA - @@ -475957,7 +475728,7 @@ - + @@ -475972,14 +475743,14 @@ pecten oculi https://upload.wikimedia.org/wikipedia/commons/thumb/b/b7/Birdeye.jpg/700px-Birdeye.jpg - + - + cjm @@ -476035,17 +475806,6 @@ - - - - - - - - - - - @@ -476080,7 +475840,7 @@ - + @@ -476097,14 +475857,14 @@ UBERON:0007626 subparaventricular zone - + - + MA @@ -476150,10 +475910,10 @@ - - - - + + + + A component of the nuclei of stria terminalis defined on the basis of topology, connectivity and multiple stains in the rat. It is one of nine components of the anterior nuclei of stria terminalis in the Functional CNS Model- Rat ( Swanson-2004 ). BAMS:MA @@ -476166,44 +475926,44 @@ the magnocellular nucleus projects to virtually all known major parts of the brain network that controls pelvic functions, including micturition, defecation, and penile erection, as well as to brain networks controlling nutrient and body water homeostasis. This and other evidence suggests that the magnocellular nucleus is part of a corticostriatopallidal differentiation modulating and coordinating pelvic functions with the maintenance of nutrient and body water homeostasis[PMID:16304682] magnocellular nucleus of stria terminalis - + - + - + - + - + MA - + PMID:16304682 - + PMID:16304682 - + PMID:16304682 @@ -476237,7 +475997,7 @@ - + The lateral septal area; largest nuclear mass in this region, plays a pivotal role in various physiological processes, such as aggression, emotion, thermoregulation, water and food intake and sexual behaviour. BAMS:LSX @@ -476252,7 +476012,7 @@ UBERON:0007628 lateral septal complex - + @@ -476265,7 +476025,7 @@ - + ABA @@ -476343,7 +476103,7 @@ - + Part of septal nuclear complex. In the human, it refers to the most caudal of scattered clusters of neurons in the septum pellucidum that extend, on the underside of the corpus callosum, from the level of the medial septal nucleus to the CA fields ( Crosby-1962 ). In the rat it is associated with the lateral septal nucleus throughout its rostro-caudal course toward the CA fields ( Swanson-1998. Adapted from Brain Info. @@ -476358,14 +476118,14 @@ UBERON:0007630 septohippocampal nucleus - + - + MA-modified @@ -476393,7 +476153,7 @@ - + BAMS:AOBgl BAMS:GlA BAMS:gl @@ -476408,14 +476168,14 @@ UBERON:0007631 accessory olfactory bulb glomerular layer - + - + ABA @@ -476444,7 +476204,7 @@ - + @@ -476467,7 +476227,7 @@ UBERON:0007632 Barrington's nucleus - + @@ -476480,7 +476240,7 @@ - + MA @@ -476743,7 +476503,7 @@ - + A nucleus of the parabrachial area, which in the human brain is a horseshoe-shaped strip of gray matter comprising the Kölliker-Fuse nucleus, the lateral parabrachial nucleus and the medial parabrachial nucleus. @@ -476768,7 +476528,7 @@ parabrachial nucleus - + @@ -476781,7 +476541,7 @@ - + MA @@ -476957,7 +476717,7 @@ - + @@ -476987,14 +476747,14 @@ UBERON:0007639 hippocampus alveus - + - + NIFSTD @@ -477167,7 +476927,7 @@ - + @@ -477192,7 +476952,7 @@ trigeminal nuclear complex http://upload.wikimedia.org/wikipedia/commons/3/30/Gray696.png - + @@ -477205,7 +476965,7 @@ - + FMA @@ -477282,12 +477042,6 @@ ligamentum arteriosum - - - - - FMA - @@ -477457,8 +477211,8 @@ - - + + @@ -477478,24 +477232,24 @@ future meninx - + - + - + EHDAA2 - + ISBN:0073040584 @@ -477540,7 +477294,7 @@ - + @@ -477553,14 +477307,14 @@ UBERON:0007646 endomeninx - + - + ISBN:9781607950325 @@ -477587,7 +477341,7 @@ - + @@ -477601,14 +477355,14 @@ UBERON:0007647 ectomeninx - + - + ISBN:9781607950325 @@ -477630,8 +477384,8 @@ - - + + The junction between the esophagus and the stomach epithelium. compare with gastroesophageal sphincter BTO:0004364 @@ -477650,24 +477404,24 @@ UBERON:0007650 esophagogastric junction - + - + - + MESH - + tFD @@ -477789,7 +477543,7 @@ - + Developing nephron where the developing glomerular capsule has been invaded by a glomerular capillary loop called the glomerular tuft. TODO EMAPA:28506 @@ -477799,7 +477553,7 @@ UBERON:0007653 capillary loop nephron - + @@ -477812,7 +477566,7 @@ - + ZFA @@ -477840,7 +477594,7 @@ - + @@ -477853,7 +477607,7 @@ UBERON:0007654 maturing nephron - + @@ -477866,7 +477620,7 @@ - + EMAPA @@ -477882,7 +477636,7 @@ - + The lateral recess is a projection of the fourth ventricle which extends into the inferior cerebellar peduncle of the brainstem. The lateral aperture, an opening in each extremity of the lateral recess, provides a conduit for cerebrospinal fluid to flow from the brain's ventricular system into the subarachnoid space. lateral recess @@ -477903,7 +477657,7 @@ lateral recess of fourth ventricle http://upload.wikimedia.org/wikipedia/commons/3/36/Gray768.png - + @@ -477916,7 +477670,7 @@ - + EMAPA @@ -477966,8 +477720,8 @@ - - + + The anular ligament (orbicular ligament) is a strong band of fibers, which encircles the head of the radius (bone), and retains it in contact with the radial notch of the ulna. anular ligament EMAPA:19322 @@ -477980,24 +477734,24 @@ UBERON:0007657 anular ligament of radius - + - + - + FMA - + FMA @@ -478093,7 +477847,7 @@ - + Cranial neural crest that is part of the facial region. We conclude this section by listing some of the many synapomorphies of craniates, including (1) the neural crest (...).[well established][VHOG] EMAPA:16311 @@ -478103,7 +477857,7 @@ UBERON:0007681 facial neural crest - + @@ -478116,7 +477870,7 @@ - + EMAPA @@ -478336,7 +478090,7 @@ - + @@ -478350,14 +478104,14 @@ UBERON:0007689 thyroid diverticulum - + - + VHOG @@ -478389,7 +478143,7 @@ - + EFO:0003626 EHDAA2:0001457 EHDAA:962 @@ -478405,14 +478159,14 @@ early pharyngeal endoderm http://dev.biologists.org/content/128/22/4573.full - + - + cjm @@ -478443,12 +478197,20 @@ - + + + + - + + + + + + @@ -478466,22 +478228,6 @@ gustatory pore https://upload.wikimedia.org/wikipedia/commons/0/0e/Taste_bud.svg - - - - - - - - - FMA - - - - - - FMA - @@ -478568,8 +478314,8 @@ - - + + The caroticotympanic branch (tympanic branch) is small; it enters the tympanic cavity through a minute foramen in the carotid canal, and anastomoses with the anterior tympanic branch of the internal maxillary, and with the stylomastoid artery. FMA:49828 @@ -478582,24 +478328,24 @@ caroticotympanic artery - + - + - + http://www.ajnr.org/cgi/content/full/21/3/572 - + FMA @@ -478652,7 +478398,7 @@ - + An axon tract that is part of a spinal cord. FMA:75683 NCIT:C12995 @@ -478661,14 +478407,14 @@ UBERON:0007699 tract of spinal cord - + - + cjm @@ -478713,7 +478459,7 @@ - + An axon tract that is part of a brain. the NIFSTD class 'nerve tract' is classified under 'regional part of brain', so it may seem like it belongs here, but actually includes spinal cord tracts FMA:83848 @@ -478722,14 +478468,14 @@ UBERON:0007702 tract of brain - + - + cjm @@ -478806,7 +478552,7 @@ - + @@ -478825,14 +478571,14 @@ UBERON:0007707 superior cerebellar peduncle of midbrain - + - + NIF @@ -478893,7 +478639,7 @@ - + FMA:72495 most likely denotes this class rather than the more generic parent, due to the part of relationship to pontine tegmentum. SCPP BAMS:scpp @@ -478909,14 +478655,14 @@ superior cerebellar peduncle of pons - + - + FMA @@ -479367,7 +479113,7 @@ - + @@ -479393,14 +479139,14 @@ interphalangeal joint of pes - + - + two in series @@ -479472,7 +479218,7 @@ - + @@ -479500,14 +479246,14 @@ interphalangeal joint of manus - + - + two in series @@ -480059,12 +479805,20 @@ - + + + + - + + + + + + @@ -480088,16 +479842,6 @@ UBERON:0007729 interphalangeal joint of manual digit 2 - - - - - - - - - EMAPA - @@ -480393,7 +480137,7 @@ - + @@ -480413,14 +480157,14 @@ metacarpophalangeal joint of manual digit 1 - + - + FMA @@ -480478,7 +480222,7 @@ - + @@ -480498,14 +480242,14 @@ UBERON:0007738 metacarpophalangeal joint of manual digit 2 - + - + FMA @@ -480569,7 +480313,7 @@ - + @@ -480591,14 +480335,14 @@ metacarpophalangeal joint of manual digit 3 - + - + FMA @@ -480669,7 +480413,7 @@ - + @@ -480691,14 +480435,14 @@ metacarpophalangeal joint of manual digit 4 - + - + FMA @@ -480769,7 +480513,7 @@ - + @@ -480790,14 +480534,14 @@ metacarpophalangeal joint of manual digit 5 - + - + FMA @@ -480861,7 +480605,7 @@ - + @@ -480884,14 +480628,14 @@ metatarsophalangeal joint of pedal digit 1 - + - + FMA @@ -480961,7 +480705,7 @@ - + @@ -480980,14 +480724,14 @@ metatarsophalangeal joint of pedal digit 2 - + - + FMA @@ -481045,7 +480789,7 @@ - + @@ -481064,14 +480808,14 @@ metatarsophalangeal joint of pedal digit 3 - + - + FMA @@ -481129,7 +480873,7 @@ - + @@ -481148,14 +480892,14 @@ metatarsophalangeal joint of pedal digit 4 - + - + FMA @@ -481213,7 +480957,7 @@ - + @@ -481233,14 +480977,14 @@ metatarsophalangeal joint of pedal digit 5 - + - + FMA @@ -481289,7 +481033,7 @@ - + The culmen is the portion of the anterior vermis adjacent to the primary fissure of cerebellum. The culmen and the anterior parts of the quadrangular lobules form the lobus culminis[WP]. The culmen lobule (lobules IV/V) is a single structure in humans, but it is divided by the intraculminate fissure in many rodents. In some mouse strains such as SLJ/J, the intraculminate fissure is absent, in some strains such as DBA/2J it is present, and other strains (C57BL/10J and BALB/cJ) exhibit considerable variablility (PMID: 1953602).[MP] ABA splits culmen into IV and V and IV-V @@ -481310,7 +481054,7 @@ UBERON:0007763 cerebellum vermis culmen - + @@ -481323,7 +481067,7 @@ - + FMA @@ -481559,7 +481303,7 @@ - + BAMS:MPA BAMS:MPO @@ -481574,14 +481318,14 @@ medial preoptic region - + - + MA @@ -481806,12 +481550,6 @@ secondary dentition - - - - - FMA - @@ -481961,28 +481699,26 @@ - + + + + - + + + + + + An endothelium that is part of a umbilical vein. BTO:0001416 CALOHA:TS-1081 UBERON:0007777 umbilical vein endothelium - - - - - - - - - BTO - @@ -481999,27 +481735,25 @@ - + + + + - + + + + + + An endothelium that is part of a umbilical artery. BTO:0000857 UBERON:0007778 umbilical artery endothelium - - - - - - - - - BTO - @@ -482188,7 +481922,7 @@ - + The serous fluid which accumulates in the peritoneal cavity in ascites. TODO - move to pathological anatomical entity ontology BTO:0000091 @@ -482199,14 +481933,14 @@ UBERON:0007795 ascitic fluid - + - + BTO @@ -482234,7 +481968,7 @@ - + Anatomical system that consists of all blood and lymph vessels. consider merging with vasculature @@ -482252,14 +481986,14 @@ vascular system - + - + MA @@ -482356,7 +482090,7 @@ - + Pygostyle refers to a number of the final few caudal vertebrae fused into a single ossification, supporting the tail feathers and musculature. In modern birds, the rectrices attach to these[WP]. SCTID:416894001 Wikipedia:Pygostyle @@ -482365,14 +482099,14 @@ pygostyle - + - + Wikipedia @@ -482399,7 +482133,7 @@ - + @@ -482430,20 +482164,14 @@ The gland is found near the base of the tail and is shaped into two symmetric parts. The oil of each part of the gland is secreted through the surface of the skin through a grease nipple-like nub. A bird will typically transfer this oil to its feathers by rubbing its head against the oil and then around the rest of the body. Tailward areas are usually preened utilizing the beak. Not all birds have a uropygial gland. Exceptions include the emu, ostrich, and bustards. These typically find other means to stay clean and dry, such as taking a dust bath uropygial gland - + - - BTO - - - - - + BTO @@ -482591,7 +482319,7 @@ - + A bridge of mesoderm connecting the caudal end of the young embryo with the trophoblastic tissues; the precursor of the umbilical cord. TODO - this is currently defined as a bridge of mesoderm, but in EHDAA2 is extraembryonic structure split into mesoderm and blood vessels BTO:0004705 @@ -482600,7 +482328,7 @@ UBERON:0007806 connecting stalk - + @@ -482613,7 +482341,7 @@ - + EHDAA2 @@ -482652,7 +482380,7 @@ - + A vasculature that is part of a connecting stalk. EHDAA2:0000313 connecting stalk blood vessels @@ -482661,14 +482389,14 @@ UBERON:0007807 connecting stalk vasculature - + - + EHDAA2 @@ -482748,9 +482476,9 @@ - - - + + + The superficial layer (fascia of Camper) is a thick superficial layer of the anterior abdominal wall. It is areolar in texture, and contains in its meshes a varying quantity of adipose tissue. It is found superficial to Scarpa's fascia. FMA:19922 Wikipedia:Fascia_of_Camper @@ -482768,34 +482496,34 @@ fascia of Camper http://upload.wikimedia.org/wikipedia/commons/2/28/Gray393.png - + - + - + - + FMA - + Wikipedia - + Wikipedia @@ -483466,7 +483194,7 @@ - + Mesentery that is located in the peritoneum. FMA:20570 TAO:0005129 @@ -483475,14 +483203,14 @@ UBERON:0007826 peritoneal mesentery - + - + FMA @@ -483900,7 +483628,7 @@ - + @@ -483942,14 +483670,14 @@ pelvic girdle skeleton http://upload.wikimedia.org/wikipedia/commons/f/fe/Gray242.png - + - + PMID:21455939 @@ -484034,8 +483762,8 @@ - - + + The organ of balance composed of three long bony tubes of the labyrinth. consider adding FMA:60186 ! Semicircular canal here, as it is part of the bony labyrinth MA:0000250 @@ -484044,11 +483772,11 @@ osseus semicircular canal - + - + @@ -484061,13 +483789,13 @@ - + MA - + MA @@ -484328,7 +484056,7 @@ - + @@ -484359,14 +484087,14 @@ UBERON:0007841 furcula - + - + http://people.eku.edu/ritchisong/342notes5.htm @@ -484455,7 +484183,7 @@ - + A posterior projection from proximal rib segments. Offers attachment sites for respiratory and shoulder muscles as well as adding structural support to the trunk skeleton[Kardong 2012]. @@ -484470,14 +484198,14 @@ WP: Although bony uncinate processes are unique to birds, cartilaginous uncinate processes are present in crocodiles. The uncinate process has also been reported in Sphenodon, Caudipteryx, oviraptorids, Confuciusornis and Chaoyangia however it does not occur in Archaeopteryx uncinate process of ribs - + - + ISBN:0073040584 @@ -484528,7 +484256,7 @@ - + @@ -484552,20 +484280,14 @@ cartilage element - + - - VSAO - - - - - + VSAO @@ -484692,12 +484414,6 @@ UBERON:0007846 dense regular connective tissue - - - - - FMA - @@ -484768,8 +484484,8 @@ - - + + Fibrous connective tissue that surrounds the notochord; includes a layer of elastin. Portion of connective tissue which surrounds the notochord.[TAO] relationship type change: part_of notochord (VSAO:0000032) CHANGED TO: surrounds notochord (UBERON:0002328)[VSAO] @@ -484788,11 +484504,11 @@ Derived from cells surrounding the notochord (possibly the slerotome). Disparate from (not derived from) notochord. perichordal tissue - + - + @@ -484805,13 +484521,13 @@ - + VSAO-modified - + ISBN:0073040584 @@ -484880,12 +484596,20 @@ - + + + + - + + + + + + A bone that is part of a craniocervical region. EMAPA:37245 MA:0000569 @@ -484894,22 +484618,6 @@ UBERON:0007914 bone of craniocervical region - - - - - - - - - MA - - - - - - MA - @@ -485178,12 +484886,6 @@ UBERON:0007997 sesamoid bone of manus - - - - - FMA - @@ -485223,12 +484925,6 @@ UBERON:0008000 sesamoid bone of pes - - - - - FMA - @@ -485321,12 +485017,6 @@ joint of girdle - - - - - MA - @@ -485388,21 +485078,21 @@ - + FMA has multiple 'Articular surface of X' classes, with no way to group them EMAPA:37620 MA:0001518 UBERON:0008124 joint articular surface - + - + MA @@ -485424,21 +485114,21 @@ - + EMAPA:35415 MA:0002849 UBERON:0008187 see also VSAO:0000098 hypertrophic cartilage zone - + - + MA @@ -485474,12 +485164,6 @@ UBERON:0008188 tendon of biceps brachii - - - - - FMA - @@ -485531,12 +485215,6 @@ UBERON:0008192 tendon of triceps brachii - - - - - FMA - @@ -485777,7 +485455,7 @@ - + @@ -485799,14 +485477,14 @@ nail plate https://upload.wikimedia.org/wikipedia/commons/9/9f/Fingernail_label.jpg - + - + MA @@ -485837,8 +485515,8 @@ - - + + A subdivision of the face that is the anteriormost part of the lower jaw region. Surface structure that is the anteriormost region of the lower jaw.[TAO] mental @@ -485862,24 +485540,24 @@ chin http://upload.wikimedia.org/wikipedia/commons/6/60/Gray1195.png - + - + - + MESH - + FMA @@ -485944,7 +485622,7 @@ - + @@ -485968,14 +485646,14 @@ forehead http://upload.wikimedia.org/wikipedia/commons/8/83/Forhead_01_ies.jpg - + - + FMA @@ -486084,7 +485762,7 @@ - + todo - consider obsoletion in MA, this includes the femur. i.e. pelvic girdle bone or femur; note that this makes the ilium etc in MA hindlimb bones. in MA this is a hindlimb bone EMAPA:37308 @@ -486097,14 +485775,14 @@ bone of hip region - + - + MA @@ -486200,12 +485878,20 @@ - + + + + - + + + + + + Musculature system of the pharyngeal and head regions. in MA this is restricted to skeletal muscles EMAPA:37259 @@ -486218,22 +485904,6 @@ UBERON:0008229 craniocervical region musculature - - - - - - - - - MA - - - - - - MA - @@ -486320,8 +485990,8 @@ - - + + Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax. EMAPA:37234 FMA:24217 @@ -486336,25 +486006,25 @@ UBERON:0008231 dorsal thoracic segment of trunk - + - + - + FMA MA - + FMA @@ -486415,13 +486085,21 @@ - + + + + - + + + + + + A muscle of back that is part of a lower back. EMAPA:37262 MA:0000502 @@ -486429,22 +486107,12 @@ UBERON:0008242 lower back muscle - - - - MA - - - - - MA - @@ -486467,13 +486135,21 @@ - + + + + - + + + + + + A muscle of back that is part of a dorsal thoracic segment of trunk. EMAPA:37261 MA:0000508 @@ -486481,22 +486157,12 @@ UBERON:0008243 upper back muscle - - - - MA - - - - - MA - @@ -486726,7 +486392,7 @@ - + A tooth-like structures surrounding the radial canal within a tube foot. @@ -486737,14 +486403,14 @@ UBERON:0008252 tube foot ampulla - + - + BTO @@ -486778,7 +486444,7 @@ - + @@ -486795,14 +486461,14 @@ UBERON:0008253 Aristotle's lantern - + - + BTO @@ -486888,12 +486554,6 @@ UBERON:0008255 right clavicle - - - - - FMA - @@ -486930,12 +486590,6 @@ UBERON:0008256 left clavicle - - - - - FMA - @@ -487236,14 +486890,22 @@ - + + + + - - + + + + + + + The fibrous connective tissue that surrounds the root of a tooth, separating it from and attaching it to the alveolar bone. It extends from the base of the gingival mucosa to the fundus of the bony socket, and its main function is to hold the tooth in its socket[BTO]. The collagen fibers, running from the cementum to the alveolar bone, that suspend a tooth in its socket; they include apical, oblique, horizontal, and alveolar crest fibers, indicating that the orientation of the fibers varies at different levels[http://www.drugs.com/dict/desmodentium.html]. The fibrous connective tissue that surrounds the root of a tooth, separating it from and attaching it to the alveolar bone. It extends from the base of the gingival mucosa to the fundus of the bony socket, and its main function is to hold the tooth in its socket[BTO]. It consist of cells, extracellular compartment of fibers. The cells are fibroblast, epithelial, undifferentiated mesenchymal cells, bone and cementum cells. The extracellular compartment consists of collagen fibers bundles embedded in ground substance. The PDL substance has been estimated to be 70% water and is thought to have a significant effect on the tooth's ability to withstand stress loads[WP][BTO:0001020, Wikipedia:Periodontal_fiber, https://github.com/obophenotype/uberon/issues/21]. @@ -487284,11 +486946,7 @@ https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg - - - - - + @@ -487301,13 +486959,7 @@ - - BTO - - - - - + PMID:19767574 Wikipedia:Dental_follicle @@ -488415,7 +488067,7 @@ - + @@ -488428,14 +488080,14 @@ UBERON:0008304 inner chondrogenic layer of perichondrium - + - + BTO @@ -488451,21 +488103,21 @@ - + The perichondrium consists of two separate layers: an outer fibrous layer and inner chondrogenic layer. The fibrous layer contains fibroblasts, which produce collagenous fibers. BTO:0005091 Wikipedia:The_Free_Encyclopedia UBERON:0008305 outer fibrous layer of perichondrium - + - + BTO @@ -488573,8 +488225,8 @@ - - + + @@ -488592,24 +488244,24 @@ UBERON:0008311 penile bulb artery - + - + - + BTO - + FMA @@ -488645,7 +488297,7 @@ - + @@ -488671,7 +488323,7 @@ common penile artery - + @@ -488684,7 +488336,7 @@ - + BTO @@ -488728,14 +488380,14 @@ - + - + @@ -488758,24 +488410,24 @@ deep artery of penis http://upload.wikimedia.org/wikipedia/commons/2/2b/Gray543.png - + - + - + BTO - + FMA @@ -488838,14 +488490,14 @@ - + - + @@ -488862,24 +488514,24 @@ deep artery of clitoris - + - + - + FMA - + FMA @@ -488903,8 +488555,8 @@ - - + + The dorsal artery of clitoris is a branch of the internal pudendal artery. FMA:20867 @@ -488914,11 +488566,11 @@ dorsal artery of clitoris - + - + @@ -488931,13 +488583,13 @@ - + FMA - + FMA @@ -488978,7 +488630,7 @@ - + @@ -489003,7 +488655,7 @@ vestibule of vagina http://upload.wikimedia.org/wikipedia/commons/f/f3/Scheidenvorhof.jpg - + @@ -489016,7 +488668,7 @@ - + BTO @@ -489154,7 +488806,7 @@ - + The white core of the inferior olivary nucleus of the medulla oblongata, most prominent medially. BAMS:hio BTO:0002300 @@ -489171,7 +488823,7 @@ UBERON:0008333 hilum of inferior olivary complex - + @@ -489184,7 +488836,7 @@ - + BTO @@ -489266,7 +488918,7 @@ - + A longitudinal sulcus on the anterior surface of the medulla oblongata, lateral to the pyramid, from which emerge the fibers of the hypoglossal nerve. BAMS:vls BTO:0002777 @@ -489288,7 +488940,7 @@ UBERON:0008335 ventrolateral sulcus of medulla oblongata - + @@ -489301,7 +488953,7 @@ - + BTO @@ -489655,7 +489307,7 @@ - + A saddle-shaped area that includes the nasal root and the lateral aspects of the nose. It lies between the glabella and the inferior boundary of the nasal bone, and extends laterally to the inner canth[WP]. MA:0002874 Wikipedia:Nasal_bridge @@ -489663,7 +489315,7 @@ nasal bridge - + @@ -489676,7 +489328,7 @@ - + MA @@ -489693,7 +489345,7 @@ - + The tissue that links the nasal tip to the nasal base, and separates the nares. It is the inferior margin of the nasal septum[EoM]. EMAPA:37832 FMA:59725 @@ -489705,14 +489357,14 @@ columella nasi - + - + FMA @@ -489856,7 +489508,7 @@ - + An epithelium that is part of a ileum. EMAPA:35423 @@ -489868,14 +489520,14 @@ ileal epithelium - + - + FMA @@ -489908,7 +489560,7 @@ - + An epithelium that is part of a duodenum. CALOHA:TS-2087 @@ -489921,14 +489573,14 @@ duodenal epithelium - + - + FMA @@ -490118,7 +489770,10 @@ - + + + + @@ -490127,7 +489782,12 @@ - + + + + + + An epithelium that is part of a distal tubule. See https://github.com/obophenotype/uberon/issues/1305 BTO:0003948 @@ -490135,16 +489795,6 @@ UBERON:0008408 distal tubular epithelium - - - - - - - - - BTO - @@ -490167,27 +489817,25 @@ - + + + + - + + + + + + An epithelium that is part of a buccal mucosa. BTO:0004803 UBERON:0008420 buccal epithelium - - - - - - - - - BTO - @@ -490368,7 +490016,7 @@ - + A transverse foramen that is part of a vertebral bone 2. FMA:23999 SCTID:281221002 @@ -490376,14 +490024,14 @@ UBERON:0008427 transverse foramen of axis - + - + FMA-abduced-lr @@ -490405,7 +490053,7 @@ - + Main, posterior part of hyoglossus muscle (vs. chondroglossus) arising from the greater horn of the hyoid bone. FMA:46720 ceratoglossus muscle @@ -490413,14 +490061,14 @@ UBERON:0008428 ceratoglossus - + - + FMA @@ -491147,10 +490795,10 @@ - - - - + + + + A muscle in the forearm and hand that flexes the thumb. It lies in the same plane as the flexor digitorum profundus. Modern humans are unique among hominids in having a flexor pollicis longus (FPL) muscle belly that is separate from that of the flexor digitorum profundus (FDP). While the FPL is not a separate muscle belly in extant great apes, a distinct tendon from the FDP belly might be present. In some individuals this tendon tend to act more like a ligament which restricts extension of the interphalangeal joint of the thumb. In orangutans there is a tendon similar in insertion and function to the FPL in humans, but which has an intrinsic origin on the oblique head of the adductor pollicis @@ -491166,46 +490814,46 @@ flexor pollicis longus muscle http://upload.wikimedia.org/wikipedia/commons/7/72/FPL.png - + - + - + - + - + Wikipedia - + The middle 2/4 of the volar surface of the radius and the adjacent interosseus membrane. dbpedia - + The base of the distal phalanx of the thumb dbpedia - + dbpedia @@ -491270,7 +490918,7 @@ - + Intertarsal articulations are the joints of the tarsus. The specific intertarsal articulations are: Talocalcaneal articulation Talocalcaneonavicular articulation Calcaneocuboid articulation Cuneonavicular articulation Cuboideonavicular articulation Intercuneiform articulation Cuneocuboid articulation. EMAPA:37762 FMA:44281 @@ -491295,14 +490943,14 @@ intertarsal joint http://upload.wikimedia.org/wikipedia/commons/5/5f/Gray360.png - + - + two adjacent tarsals @@ -491448,8 +491096,8 @@ - - + + A powerful flexor of the thigh at the hip joint (psoas major) and a weak flexor of the trunk and lumbar spinal column (psoas minor). Psoas is derived from the Greek 'psoa', the plural meaning 'muscles of the loin'. It is a common site of infection manifesting as abscess (PSOAS ABSCESS). The psoas muscles and their fibers are also used frequently in experiments in muscle physiology. BTO:0001140 EMAPA:36157 @@ -491464,11 +491112,11 @@ UBERON:0008450 psoas muscle - + - + @@ -491481,13 +491129,13 @@ - + dbpedia-abduced - + dbpedia-abduced @@ -491530,7 +491178,7 @@ - + A muscle situated immediately behind the upper part of the Longus capitis that arises from the anterior surface of the lateral mass of the atlas, and from the root of its transverse process that inserts into the inferior surface of the basilar part of the occipital bone immediately in front of the foramen magnum. Flexion of neck at atlanto-occipital joint FMA:46312 @@ -491550,7 +491198,7 @@ rectus capitis anterior http://upload.wikimedia.org/wikipedia/commons/6/6f/Rectus_capitis_anterior_muscle.PNG - + @@ -491563,7 +491211,7 @@ - + basilar part Wikipedia @@ -491642,9 +491290,9 @@ - - - + + + A muscle that arises by a pointed tendon from the spinous process of the axis and inserts into the lateral part of the inferior nuchal line of the occipital bone and the surface of the bone immediately below the line. extend and rotate the atlanto-occipital joint @@ -491664,15 +491312,15 @@ rectus capitis posterior major http://upload.wikimedia.org/wikipedia/commons/d/dd/Rectus_capitis_posterior_major_muscle.PNG - + - + - + @@ -491685,21 +491333,21 @@ - + Dorsal ramus of C1 dbpedia - + Spinous process of the axis dbpedia - + Inferior nuchal line of the occipital bone dbpedia @@ -491766,9 +491414,9 @@ - - - + + + A muscle that arise from the tubercle on the posterior arch of the and is inserted into the medial part of the inferior nuchal line of the occipital bone and the surface between it and the foramen magnum, and also takes some attachment to the spinal dura. extends the head at the neck FMA:32526 @@ -491786,15 +491434,15 @@ rectus capitis posterior minor http://upload.wikimedia.org/wikipedia/commons/e/ed/Rectus_capitis_posterior_minor.png - + - + - + @@ -491807,21 +491455,21 @@ - + suboccpital nerve dbpedia - + the tubercle on the posterior arch of the atlas dbpedia - + the medial part of the inferior nuchal line of the occipital bone and the surface between it and the foramen magnum dbpedia @@ -492307,7 +491955,7 @@ - + The Abductor hallucis lies along the medial border of the pes and covers the origins of the plantar vessels and nerves. It arises from the medial process of the tuberosity of the calcaneus, from the laciniate ligament, from the plantar aponeurosis, and from the intermuscular septum between it and the Flexor digitorum brevis. The fibers end in a tendon, which is inserted, together with the medial tendon of the Flexor hallucis brevis, into the tibial side of the base of the first phalanx of the great toe. FMA:37448 @@ -492320,14 +491968,14 @@ abductor hallucis muscle https://upload.wikimedia.org/wikipedia/commons/b/bf/Abductor_hallucis.png - + - + tuberosity of the calcaneus dbpedia @@ -492358,10 +492006,10 @@ - - - - + + + + The abductor pollicis brevis is a muscle in the manus that functions as an abductor of the thumb. FMA:37373 @@ -492375,47 +492023,47 @@ abductor pollicis brevis muscle http://upload.wikimedia.org/wikipedia/commons/7/77/Musculusabductorpollicisbrevis.png - + - + - + - + - + Transverse carpal ligament the scaphoid and trapezium dbpedia - + Transverse carpal ligament the scaphoid and trapezium dbpedia - + Radial base of proximal phalanx of thumb and the thumb extensors dbpedia - + dbpedia @@ -492457,8 +492105,8 @@ - - + + @@ -492488,24 +492136,24 @@ cremaster muscle http://upload.wikimedia.org/wikipedia/commons/6/67/Gray1143.png - + - + - + dbpedia - + dbpedia @@ -492568,8 +492216,8 @@ - - + + The smallest of the three gluteal muscles, situated immediately beneath the gluteus medius. EMAPA:36230 @@ -492587,11 +492235,11 @@ gluteus minimus http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG - + - + @@ -492604,14 +492252,14 @@ - + Gluteal surface of ilium under gluteus medius. dbpedia - + Greater trochanter of the femur dbpedia @@ -492733,7 +492381,7 @@ - + The infrahyoid muscles are a group of four pairs of muscles in the anterior part of the neck. (The term infrahyoid refers to the region below to the hyoid bone in the neck. ) Collectively, they are referred to as the strap muscles, because the muscles are long and flat much like a strap. FMA:13338 @@ -492751,14 +492399,14 @@ infrahyoid muscle https://upload.wikimedia.org/wikipedia/commons/4/48/Infrahyoid_muscles.png - + - + dbpedia @@ -492819,8 +492467,8 @@ - - + + The piriformis is a muscle in the gluteal region that originates from the anterior (front) part of the sacrum, the part of the spine in the gluteal region, and from the superior margin of the greater sciatic notch (as well as the sacroiliac joint capsule and the sacrotuberous ligament). It exits the pelvis through the greater sciatic foramen to insert on the greater trochanter of the femur. Its tendon often joins with the tendons of the superior gemellus, inferior gemellus, and obturator internus muscles prior to insertion[WP,modified]. EMAPA:36239 @@ -492837,11 +492485,11 @@ piriformis muscle http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG - + - + @@ -492854,13 +492502,13 @@ - + dbpedia - + dbpedia @@ -492966,7 +492614,7 @@ - + A muscle that arises from the spinous processes of the third to the sixth thoracic vertebrae and inserts into the posterior tubercles of the transverse processes of the upper two or three cervical vertebrae[WP,modified]. Bilaterally: Extend the head & neck, Unilaterally: Lateral flexion to the same side, Rotation to the same side. FMA:22681 @@ -492977,7 +492625,7 @@ splenius cervicis http://upload.wikimedia.org/wikipedia/commons/2/26/Musculus_splenius_cervicis.PNG - + @@ -492990,7 +492638,7 @@ - + transverse processes of C1-C3 dbpedia @@ -493173,7 +492821,7 @@ - + The posterior cricoarytenoid muscles are extremely small, paired muscles that extend from the posterior cricoid cartilage to the arytenoid cartilages in the larynx. By rotating the arytenoid cartilages laterally, these muscles abduct the vocal cords and thereby open the rima glottidis. Their action opposes the lateral cricoarytenoid muscles. The posterior cricoarytenoid muscles receive innervation from the recurrent laryngeal branch of the vagus nerve (CN X). Paralysis of the posterior cricoarytenoid muscles may lead to asphyxiation as they are the only laryngeal muscles to open the true vocal folds, allowing inspiration and expiration. FMA:46576 @@ -493190,14 +492838,14 @@ posterior crico-arytenoid http://upload.wikimedia.org/wikipedia/commons/9/9d/Musculuscricoarytenoideusposterior.png - + - + dbpedia @@ -493250,7 +492898,7 @@ - + The lateral cricoarytenoid (also anterior cricoarytenoid) muscles extend from the lateral cricoid cartilage to the ipsilateral arytenoid cartilage. By rotating the arytenoid cartilages medially, these muscles adduct the vocal cords and thereby close the rima glottidis, protecting the airway. (Their action is antagonistic to that of the posterior cricoarytenoid muscles. ) The lateral cricoarytenoid muscles receive innervation from the recurrent laryngeal branch of the vagus nerve (CN X). FMA:46579 @@ -493269,14 +492917,14 @@ lateral crico-arytenoid http://upload.wikimedia.org/wikipedia/commons/3/34/Musculuscricoarytenoideuslateralis.png - + - + dbpedia @@ -493396,9 +493044,9 @@ - - - + + + The Thyroarytenoid is a broad, thin, muscle which lies parallel with and lateral to the vocal fold, and supports the wall of the ventricle and its appendix. It functions in fine tonal control of the vocal cords. FMA:46588 NCIT:C33776 @@ -493422,15 +493070,15 @@ thyro-arytenoid http://upload.wikimedia.org/wikipedia/commons/6/64/Musculusthyreoarytenoideus.png - + - + - + @@ -493443,21 +493091,21 @@ - + recurrent laryngeal branch of the vagus dbpedia - + Inner surface of the thyroid cartilage dbpedia - + Anterior surface of arytenoid cartilage dbpedia @@ -493560,7 +493208,7 @@ - + The vocal muscle is the upper portion of the thyroarytenoid muscle which is primarily involved in producing speech. in FMA this is not placed under thyro-arytenoid but almost all sources consider this to be the case (confirmed with FEED:rd) @@ -493577,7 +493225,7 @@ vocalis muscle http://upload.wikimedia.org/wikipedia/commons/6/64/Musculusthyreoarytenoideus.png - + @@ -493590,7 +493238,7 @@ - + FEED:rd Wikipedia @@ -493633,8 +493281,8 @@ - - + + A muscle of the tongue that consists of a thin stratum of oblique and longitudinal fibers immediately underlying the mucous membrane on the dorsum of the tongue. FMA:46693 SCTID:244790006 @@ -493649,11 +493297,11 @@ superior longitudinal muscle of tongue http://upload.wikimedia.org/wikipedia/commons/3/30/Musculuslongitudinalissuperiorlinguae.png - + - + @@ -493666,13 +493314,13 @@ - + Wikipedia - + edges of the tongue dbpedia @@ -493726,8 +493374,8 @@ - - + + A muscle of the tongue that consists of fibers which arise from the median fibrous septum and pass lateralward to be inserted into the submucous fibrous tissue at the sides of the tongue. EMAPA:18281 FMA:46695 @@ -493747,11 +493395,11 @@ transverse muscle of tongue http://upload.wikimedia.org/wikipedia/commons/1/14/Musculustransversuslinguae.png - + - + @@ -493764,13 +493412,13 @@ - + Wikipedia - + sides of the tongue dbpedia @@ -493836,8 +493484,8 @@ - - + + A muscle of the tongue that is found only at the borders of the forepart of the tongue. Its fibers extend from the upper to the under surface of the organ. EMAPA:18282 FMA:46696 @@ -493859,11 +493507,11 @@ vertical muscle of tongue http://upload.wikimedia.org/wikipedia/commons/d/d8/Gray1020.png - + - + @@ -493876,14 +493524,14 @@ - + Submucosal fibrous layer of dorsum of tongue dbpedia - + Inferior surface borders of tongue dbpedia @@ -493962,9 +493610,9 @@ - - - + + + The levator veli palatini is the elevator muscle of the velum palatinum in the human body. During swallowing, it contracts, elevating the soft palate to help prevent food from entering the nasopharynx. It is innervated via the pharyngeal plexus, primarily by the vagus nerve (CN X). The levator veli palatini (Levator palati) is a thick, rounded muscle situated lateral to the choanC&. It arises from the under surface of the apex of the petrous part of the temporal bone and from the medial lamina of the cartilage of the auditory tube. After passing above the upper concave margin of the Constrictor pharyngis superior it spreads out in the palatine velum, its fibers extending obliquely downward and medially to the middle line, where they blend with those of the opposite side. The levator veli palatini is part of the soft palate that attaches to the cranial base, pharyngotympanic tube and the soft palate and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED] FMA:46727 @@ -493979,15 +493627,15 @@ levator veli palatini http://upload.wikimedia.org/wikipedia/commons/a/a5/Musculuslevatorvelipalatini.png - + - + - + @@ -494000,20 +493648,20 @@ - + FMA-abduced-lr - + Pharyngeal Branch of Vagus dbpedia - + dbpedia @@ -494070,8 +493718,8 @@ - - + + The tensor veli palatini (tensor palati) is a broad, thin, ribbon-like muscle in the head that tenses the soft palate. The tensor veli palatini is a muscle of the soft palate that attaches to the cranial base and pharyngotympanic tube, wraps around the pterygoid hamulus and then attaches to the midline palatal raphe of the soft palate that is innervated by cranial nerve V3.[FEED] @@ -494088,11 +493736,11 @@ tensor veli palatini http://upload.wikimedia.org/wikipedia/commons/3/30/Musculustensorvelipalatini.png - + - + @@ -494105,13 +493753,13 @@ - + FMA-abduced-lr - + medial pterygoid of mandibular nerve dbpedia @@ -494219,7 +493867,7 @@ - + The depressor septi (Depressor alE nasi) arises from the incisive fossa of the maxilla. Its fibers ascend to be inserted into the nasal septum and back part of the alar part of nasalis muscle. It lies between the mucous membrane and muscular structure of the lip. FMA:46777 SCTID:244733006 @@ -494233,7 +493881,7 @@ depressor septi nasi http://upload.wikimedia.org/wikipedia/commons/6/6c/Musculusdepressorseptinasi.PNG - + @@ -494246,7 +493894,7 @@ - + incisive fossa of the maxilla dbpedia @@ -494294,7 +493942,7 @@ - + The Depressor Supercilii is an eye muscle of the human body. The nature of this muscle is in some dispute. Few printed anatomies include it (Netter, et al. ) and many authorities consider it to be part of the orbicularis oculi muscle . On the other hand, many dermatologists, ophthalmologists and plastic surgeons hold that the depressor supercilli is a distinct muscle and has a definite, individual effect on the movement of the eybrow and skin of the glabella. FMA:46798 SCTID:244728007 @@ -494305,7 +493953,7 @@ depressor supercilii http://upload.wikimedia.org/wikipedia/commons/e/e2/Gray379.png - + @@ -494318,7 +493966,7 @@ - + Medial aspect of bony orbit dbpedia @@ -494348,8 +493996,8 @@ - - + + @@ -494368,11 +494016,11 @@ levator labii superioris alaeque nasi http://upload.wikimedia.org/wikipedia/commons/1/1c/Musculuslevatorlabiisuperiorisalaequenasi.png - + - + @@ -494385,13 +494033,13 @@ - + dbpedia - + nostril and upper lip dbpedia @@ -494699,7 +494347,7 @@ - + @@ -494720,7 +494368,7 @@ levator anguli oris - + @@ -494733,7 +494381,7 @@ - + dbpedia @@ -494800,7 +494448,7 @@ - + @@ -494819,8 +494467,8 @@ - - + + A muscle of facial expression, innervated by the facial nerve, attached to the skin of the lower lip and inferior to the lower lip (in humans this region is called the chin or mental region), the orbicularis oris muscle, and the mandible in the symphyseal region. See Diogo et al., 2009; Burrows et al., 2011). @@ -494835,40 +494483,34 @@ mentalis muscle http://upload.wikimedia.org/wikipedia/commons/3/37/Mentalis.png - + - + - + - - MFMO - - - - - + FMA-abduced-lr - + dbpedia - + dbpedia @@ -494903,8 +494545,8 @@ - - + + The Depressor anguli oris (Triangularis) arises from the oblique line of the mandible, whence its fibers converge, to be inserted, by a narrow fasciculus, into the angle of the mouth. EMAPA:37842 @@ -494920,11 +494562,11 @@ depressor anguli oris muscle http://upload.wikimedia.org/wikipedia/commons/3/36/Gray381.png - + - + @@ -494937,14 +494579,14 @@ - + tubercle of mandible dbpedia - + modiolus of mouth dbpedia @@ -495065,12 +494707,6 @@ risorius muscle http://upload.wikimedia.org/wikipedia/commons/a/af/Musculusrisorius.png - - - - - MFMO - @@ -495425,9 +495061,9 @@ - - - + + + Any of the three pairs of muscles in the lateral neck, namely the scalenus anterior, scalenus medius, and scalenus posterior. They are innervated by the spinal nerves C4-C8[WP]. FMA:64829 NCIT:C33517 @@ -495449,15 +495085,15 @@ scalene muscle http://upload.wikimedia.org/wikipedia/commons/6/6e/Scalenus.png - + - + - + @@ -495470,20 +495106,20 @@ - + dbpedia - + first and second ribs dbpedia - + first and second ribs dbpedia @@ -495693,9 +495329,9 @@ - - - + + + The Subcostales (Infracostales) consist of muscular and aponeurotic fasciculi, which are usually well-developed only in the lower part of the thorax; each originates from the inner surface of one rib, and is inserted into the inner surface of the second or third rib above, near its angle. Their fibers run in the same direction as those of the Intercostales interni. FMA:9759 @@ -495711,15 +495347,15 @@ subcostal muscle - + - + - + @@ -495732,20 +495368,20 @@ - + dbpedia - + inner surface of one rib dbpedia - + inner surface of the second or third rib below near its angle dbpedia @@ -495855,9 +495491,9 @@ - - - + + + The stylohyoid is a pharyngeal arch II muscle that participates in oral/pharygeal behaviors and is innervated by the stylohoid branch of the facial nerve and attaches to the stylohyal and the non-stylohyal part of the hyoid apparatus. The stylohyoid is a pharyngeal arch II muscle that participates in oral/pharygeal behaviors and is innervated by the stylohoid branch of the facial nerve and attaches to the stylohyal.[FEED] @@ -495875,15 +495511,15 @@ stylohyoid muscle http://upload.wikimedia.org/wikipedia/commons/9/94/Musculi_colli_stylohyoideus.svg - + - + - + @@ -495896,19 +495532,19 @@ - + dbpedia - + dbpedia - + greater cornu of hyoid bone dbpedia @@ -496266,7 +495902,7 @@ - + @@ -496295,14 +495931,14 @@ inner cell mass derived hypoblast - + - + Wikipedia @@ -496370,7 +496006,7 @@ - + @@ -496396,14 +496032,14 @@ hypaxial musculature https://github.com/obophenotype/uberon/issues/686 - + - + XAO @@ -496464,7 +496100,7 @@ - + @@ -496491,14 +496127,14 @@ epaxial musculature - + - + XAO @@ -496554,8 +496190,8 @@ - - + + The Subclavius is a small triangular muscle, placed between the clavicle and the first rib. Along with the pectoralis major and pectoralis minor muscles, the subclavius muscle makes up the anterior wall of the axilla. FMA:13410 NCIT:C33644 @@ -496567,11 +496203,11 @@ subclavius http://upload.wikimedia.org/wikipedia/commons/a/a2/Gray411subclavius.png - + - + @@ -496584,13 +496220,13 @@ - + dbpedia - + subclavian groove of clavicle dbpedia @@ -496629,7 +496265,10 @@ - + + + + @@ -496640,7 +496279,12 @@ - + + + + + + An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers. EHDAA2:0000444 EHDAA:42 @@ -496655,16 +496299,6 @@ The epiblast cells (appearing on day 8 of human embryonic development) make up a columnar epithelium with dense microvilli on the apical surface. During gastrulation, the epiblast cells undergo epithelial-to-mesenchymal transition and delaminate to become the loose mesenchyme of the primitive streak. The epiblast is present in postimplantation mouse embryos between E5.5-E7.5. inner cell mass derived epiblast - - - - - - - - - Wikipedia - @@ -496693,13 +496327,21 @@ - + + + + - - + + + + + + + An epiblast (generic) that develops_from a blastodisc. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation. Kimmel et al, 1995.[TAO] @@ -496712,26 +496354,16 @@ blastodisc derived epiblast - - - - - + - + ZFA - - - - - Wikipedia - @@ -496979,7 +496611,7 @@ - + The upper part of the gluteal tuberosity is often elongated into a roughened crest, on which a more or less well-marked, rounded tubercle, the third trochanter, is occasionally developed. underdeveloped / not present in humans FMA:75824 @@ -496989,7 +496621,7 @@ third trochanter https://upload.wikimedia.org/wikipedia/commons/2/2b/Third_trochanter-tweaked.png - + @@ -497002,7 +496634,7 @@ - + FMA @@ -497115,21 +496747,21 @@ - + Any of the three large depressions in the posterior, middle, and anterior aspects of the floor of the cranial cavity. todo - review the relationships for this and its subclasses; the relation should be bounded rather than part of, and contains should be used for the brain parts contained by the fossae FMA:321144 UBERON:0008789 cranial fossa - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -497204,7 +496836,7 @@ - + A rugal fold that is part of a stomach. FMA:15106 NCIT:C32660 @@ -497218,14 +496850,14 @@ UBERON:0008791 rugal fold of stomach - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -497285,7 +496917,7 @@ - + A rugal fold that is part of a vagina. FMA:19991 ruga of vagina @@ -497293,14 +496925,14 @@ UBERON:0008798 rugal fold of vagina - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -497340,7 +496972,7 @@ - + Any of the the series of transverse folds (ridges) of the mucosa located on the anterior third part of the secondary (hard) palate of most mammalian species. A masticatory vestige on the hard palate; one of several irregular, sometimes branching, crests of soft tissue that radiate from the region of the incisive papillae at their most anterior parts and extend a slight distance backward, crossing the hard palate and reaching laterally for variable distances. rugae are present on each side of the median palatal raphe and behind the incisive papillae, but their number and arrangement are species specific; together with the teeth and the tongue, rugae take part in mastication by helping to sense, hold and mash the food; rugae harbor various types of intraepithelial sensory structures (such as Merckel cells, corpuscular endings and free nerve endings), and play a sensory role when the food is pressed by the tongue against the hard palate[MP] @@ -497367,14 +496999,14 @@ transverse palatine fold - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -497504,7 +497136,7 @@ - + Primitive endoderm-derived tissue that lines the luminal surface of the mural trophectoderm[MP]. EMAPA:16053 distal endoderm @@ -497512,7 +497144,7 @@ parietal endoderm - + @@ -497525,7 +497157,7 @@ - + MP @@ -497655,11 +497287,11 @@ - - - - - + + + + + The stylopharyngeus is a muscle in the head that stretches between the styloid process and the pharynx. The stylopharyngeus is a pharyngeal arch III muscle that participates in oral/pharyngeal behaviors and is innervated by the n. to stylopharyngeus branch of the glossopharyngeal n. and attaches to the hyoid apparatus and the pharynx.[FEED] @@ -497676,23 +497308,23 @@ stylopharyngeus muscle http://upload.wikimedia.org/wikipedia/commons/5/59/Musculusstylopharyngeus.png - + - + - + - + - + @@ -497705,31 +497337,31 @@ - + FMA-abduced-lr - + dbpedia - + Wikipedia - + dbpedia - + thyroid cartilage dbpedia @@ -497882,7 +497514,7 @@ - + @@ -497902,14 +497534,14 @@ coagulating gland - + - + MA EMAPA @@ -498207,7 +497839,7 @@ - + The part of the cochlear labyrinth where the scala tympani and the scala vestibuli meet. It is the main component of the cochlear apex. The hair cells in this area best detect low frequency sounds. apex of cochlea cochlear apex @@ -498221,7 +497853,7 @@ helicotrema http://upload.wikimedia.org/wikipedia/commons/1/19/Gray923.png - + @@ -498234,7 +497866,7 @@ - + Wikipedia @@ -498347,7 +497979,7 @@ - + @@ -498368,14 +498000,14 @@ pharyngeal slit https://upload.wikimedia.org/wikipedia/commons/thumb/2/22/Gill_slits.png/280px-Gill_slits.png - + - + cjm @@ -498459,19 +498091,19 @@ - + An endoderm that is part of a thymus primordium. UBERON:0008817 thymus primordium endoderm - + - + PMID:16313389 @@ -498487,7 +498119,7 @@ - + The superior mediastinum is that portion of the interpleural space which lies between the manubrium sterni in front, and the upper thoracic vertebrae behind. FMA:9827 NCIT:C33684 @@ -498500,14 +498132,14 @@ superior mediastinum http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png - + - + FMA @@ -498542,8 +498174,8 @@ - - + + Anterior, middle and posterior mediastinum. FMA:9828 SCTID:243950006 @@ -498552,24 +498184,24 @@ UBERON:0008819 inferior mediastinum - + - + - + FMA-propagated - + FMA @@ -498591,7 +498223,7 @@ - + The anterior mediastinum exists only on the left side where the left pleura diverges from the mid-sternal line. It is narrow, above, but widens out a little below. FMA:9838 @@ -498605,14 +498237,14 @@ anterior mediastinum http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png - + - + FMA @@ -498653,7 +498285,7 @@ - + The middle mediastinum is the broadest part of the interpleural space. It is made up of the pericardial sac and its contents. FMA:9839 NCIT:C33123 @@ -498666,14 +498298,14 @@ middle mediastinum http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png - + - + FMA @@ -498708,7 +498340,7 @@ - + The posterior mediastinum is an irregular triangular space running parallel with the vertebral column. FMA:9840 NCIT:C33368 @@ -498721,14 +498353,14 @@ posterior mediastinum http://upload.wikimedia.org/wikipedia/commons/a/ab/Mediastinum.png - + - + FMA @@ -498775,7 +498407,7 @@ - + @@ -498789,7 +498421,7 @@ neural tube derived brain https://github.com/obophenotype/uberon/issues/338 - + @@ -498802,7 +498434,7 @@ - + FMA @@ -499045,8 +498677,8 @@ - - + + @@ -499065,11 +498697,11 @@ presphenoid bone - + - + @@ -499082,13 +498714,13 @@ - + MA - + ISBN:0073040584 @@ -499310,7 +498942,7 @@ - + A nerve arising from the second and third cervical nerves from the cervical plexus and innervating the skin over the parotid gland, the skin of part of the ear, the adjacent portion of the scalp, cheek, and angle of the jaw. FMA:6872 @@ -499324,14 +498956,14 @@ great auricular nerve http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray805.png - + - + FMA Wikipedia @@ -499368,7 +499000,7 @@ - + The first body segment in annelids worms. It is in front of (but does not include) the mouth, being usually a small shelf- or lip-like extension over the dorsal side of the mouth. Often functions like a kind of overlip when the animal is feeding. sometimes bears antennae and eyes @@ -499378,14 +499010,14 @@ UBERON:0008834 prostomium - + - + Wikipedia @@ -499412,8 +499044,8 @@ - - + + An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts. in mice, the hepatic diverticulum forms by E9 and expands into an obvious liver bud by E10 The caudal part of the septum transversum is invaded by the hepatic diverticulum which divides within it to form the liver and thus gives rise to the ventral mesentery of the foregut. @@ -499431,11 +499063,11 @@ hepatic diverticulum http://upload.wikimedia.org/wikipedia/commons/4/4f/Gray1088.png - + - + @@ -499448,14 +499080,14 @@ - + caudal part EHDAA2 - + EHDAA2 @@ -499494,12 +499126,12 @@ - + BTO:0001642 UBERON:0008836 liver bud - + @@ -499512,7 +499144,7 @@ - + http://www.stembook.org/node/512 @@ -499665,7 +499297,7 @@ - + An autopod pad that is in the metatarsal region. The canine metatarsal pad is large and heart-shaped, and functions to cushion the foot. The pad is covered by a naked, densely cornified epidermis, which is usually highly pigmented and is the toughest region of the canine skin. The digital cushion or bulk of the foot pad is composed of a subcutaneous adipose tissue, partitioned by reticular, collagenous and elastic fibres. The subcutis of the canine footpads contains sweat glands embedded in the adipose tissue. The ducts of these glands channel through the thick epidermis of the foot pad. The secretions from these glands function as territorial or trail markers[MURDOCH:1334]. EMAPA:18507 @@ -499676,14 +499308,14 @@ UBERON:0008840 plantar pad - + - + EMAPA @@ -499741,7 +499373,7 @@ - + @@ -499755,20 +499387,14 @@ UBERON:0008842 suspensory ligament of testis - + - - Obol - - - - - + Obol @@ -499969,7 +499595,10 @@ - + + + + @@ -499980,9 +499609,14 @@ - - - + + + + + + + + Dense regular connective tissue connecting two or more adjacent skeletal elements[VSAO,modified]. logical definition deliberately made strict to avoid classifying MA:spiral ligament as both nonskeletal and skeletal. see https://github.com/obophenotype/mouse-anatomy-ontology/issues/71 Dense regular connective tissue connecting two or more adjacent skeletal elements or supporting an organ.[VSAO] @@ -500006,34 +499640,24 @@ skeletal ligament https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg - - - - - + - + - + AEO - - bones or cartilage organs - - - - - + VSAO @@ -500099,7 +499723,7 @@ - + @@ -500125,7 +499749,7 @@ The ligament runs in the broad ligament of the uterus, which is a fold of peritoneum rather than a fibrous ligament. Specifically, it is located in the parametrium ovarian ligament - + @@ -500138,7 +499762,7 @@ - + lower gubernaculum Wikipedia @@ -500175,14 +499799,14 @@ - + Connects the cranial tip of the future gonad to the dorsocranial abdominal cavity. TODO - check - add cranial ovarian susp ligaments EMAPA:30068 UBERON:0008848 cranial suspensory ligament - + @@ -500195,7 +499819,7 @@ - + EMAPA @@ -500395,7 +500019,7 @@ - + A group of granular epithelial cells in the uterine muscle beneath the placenta that develops during pregnancy in rodents and some other species. MA:0001723 @@ -500404,14 +500028,14 @@ placenta metrial gland - + - + MP @@ -500445,7 +500069,7 @@ - + @@ -500471,14 +500095,14 @@ stomach muscularis externa - + - + MA-abduced @@ -500524,7 +500148,7 @@ - + @@ -500559,14 +500183,14 @@ stomach smooth muscle circular layer - + - + FMA @@ -500614,7 +500238,7 @@ - + @@ -500645,7 +500269,7 @@ pyloric canal https://upload.wikimedia.org/wikipedia/commons/3/33/Illu_stomach.jpg - + @@ -500658,7 +500282,7 @@ - + Wikipedia @@ -500706,7 +500330,7 @@ - + @@ -500731,7 +500355,7 @@ cardiac gastric gland - + @@ -500744,7 +500368,7 @@ - + FMA @@ -500846,7 +500470,7 @@ - + @@ -500870,7 +500494,7 @@ pyloric gastric gland http://upload.wikimedia.org/wikipedia/commons/b/bf/Gray1054.png - + @@ -500883,7 +500507,7 @@ - + Wikipedia:Tubular_gland @@ -500924,7 +500548,7 @@ - + @@ -500950,14 +500574,14 @@ The only layer of the three which is not seen in other parts of the digestive system[WP]. stomach smooth muscle inner oblique layer - + - + MP @@ -501099,7 +500723,7 @@ - + @@ -501116,14 +500740,14 @@ trabecular network of bone - + - + MP @@ -501386,7 +501010,7 @@ - + @@ -501418,14 +501042,14 @@ hypodermis skeletal muscle layer - + - + MP-def @@ -501460,7 +501084,7 @@ - + @@ -501492,14 +501116,14 @@ epidermal-dermal junction - + - + MP @@ -501597,7 +501221,7 @@ - + subclasses (anterior, superior, posterior) can be added on request EMAPA:37434 FMA:61035 @@ -501609,7 +501233,7 @@ UBERON:0008879 ligament of pinna - + @@ -501622,7 +501246,7 @@ - + MA @@ -501656,7 +501280,7 @@ - + Rearmost segment of annelid worms. periproct Wikipedia:Periproct @@ -501664,14 +501288,14 @@ UBERON:0008880 annelid pygidium - + - + Wikipedia @@ -501705,8 +501329,8 @@ - - + + @@ -501728,24 +501352,24 @@ rostral migratory stream - + - + - + BTO-modified - + MP-modified @@ -502108,12 +501732,6 @@ rectal venous plexus http://upload.wikimedia.org/wikipedia/commons/6/69/Gray587.png - - - - - FMA - @@ -502310,9 +501928,9 @@ - - - + + + A primordium or bud that develops into a gill. TAO:0001107 XAO:0000448 @@ -502324,15 +501942,15 @@ UBERON:0008894 pharyngeal gill precursor - + - + - + @@ -502345,19 +501963,19 @@ - + XAO - + XAO - + ZFA @@ -502398,8 +502016,8 @@ - - + + Subdivision of endoskeleton derived from pharyngeal arches. @@ -502431,24 +502049,24 @@ splanchnocranium http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg - + - + - + https://github.com/obophenotype/uberon/issues/83 - + redundant Grays PMID:11237469 @@ -502765,7 +502383,7 @@ - + Lateral protrusion of the third ventricle. lateral recess TAO:0000231 @@ -502775,7 +502393,7 @@ UBERON:0008902 lateral recess of third ventricle - + @@ -502788,7 +502406,7 @@ - + ZFA @@ -502843,8 +502461,8 @@ - - + + Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Type of mechanoreceptive organ of the lateral line which are arranged in lines on the body surface. These organs are constituted by hair cells and supporting cells and it is located in the epidermis with its hair cells exposed to the surface. Absent in some caecilians. These receptors receive afferent and efferent innervations.[AAO] Volcano-shaped lateral line sensory organ located in characteristic positions within the skin epithelium and containing hair cells and their support elements. Kimmel et al, 1995. (Also see Anatomical Atlas entry for lateral line by T. Whitfield.)[TAO] @@ -502863,24 +502481,24 @@ neuromast - + - + - + DOI:10.1038/ncomms1502 - + ZFA @@ -502984,7 +502602,7 @@ - + @@ -503008,14 +502626,14 @@ UBERON:0008906 lateral line nerve - + - + NCBIBook:NBK53175 @@ -503066,13 +502684,21 @@ - + + + + - + + + + + + Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO]. Intramembranous bone that forms superficially in the organism.[TAO] other AOs are not yet in sync with this classification @@ -503086,10 +502712,6 @@ UBERON:0008907 dermal bone - - - - @@ -503102,12 +502724,6 @@ VSAO - - - - - VSAO - @@ -503247,8 +502863,8 @@ - - + + Bone element that is located on the surface of a cartilage element. Replacement bone that forms within the connective tissue surrounding cartilage.[TAO] AAO:0010779 @@ -503261,11 +502877,11 @@ include the subtyping under 'replacement bone', for consistency with ZFA, but VSAO does not include this intermediate class perichondral bone - + - + @@ -503278,13 +502894,13 @@ - + VSAO - + ZFA @@ -503909,7 +503525,7 @@ - + @@ -503939,7 +503555,7 @@ somatosensory cortex - + @@ -503952,7 +503568,7 @@ - + BTO @@ -504004,7 +503620,7 @@ - + (Chapin & Lin, 1984, rat): the region considered as the SI cortex is not a cytoarchitecturally homogeneous structure but consists instead of a patchwork array of areas containing dense aggregations of layer IV granule cells, surrounded by granule-cell-sparse regions. As was shown by Welker (b71,b76), and in our own mapping studies (see Fig. 3), this discontinuous pattern of granular, or koniocortical, zones contains within itself a map of the ratbs cutaneous periphery. There are clear subtypes within this cytoarchitectural subregion, notably including the bgranular aggregateb type of cytoarchitecture characteristic of the paw, limb, and mystacial vibrissae areas, and the bbarrel-fieldb type (originally described by Woolsey and Van der Loos, b70) seen in the nose and perioral regions. In the mouse, but not the rat, such barrels also cover the whole whisker representation (Welker and Woolsey, b74). ABA disjointness - Removed relationship: part_of UBERON:0001870 frontal cortex S1 @@ -504025,14 +503641,14 @@ primary somatosensory cortex - + - + DHBA MA NIFSTD @@ -504093,7 +503709,7 @@ - + The area of the upper bank of the lateral sulcus that is involved in somatic sensation. TODO - check brodmann S2 @@ -504109,14 +503725,14 @@ secondary somatosensory cortex - + - + WP @@ -504252,13 +503868,13 @@ - + The pedal ganglia mainly are necessary for coordination of locomotion of a snail. BTO:0001012 UBERON:0008939 pedal ganglion - + @@ -504271,7 +503887,7 @@ - + BTO @@ -504287,13 +503903,13 @@ - + A lateral ganglion that innervates pallial cavity, gills and skin of a snail[BTO,modified]. BTO:0001841 UBERON:0008940 parietal ganglion - + @@ -504306,7 +503922,7 @@ - + BTO @@ -504322,14 +503938,14 @@ - + A knot of nerves in The pallial cavity that innervates the mantle of a snail[BTO,modified]. to be ceded to MOLO BTO:0001842 UBERON:0008941 pleural ganglion - + @@ -504342,7 +503958,7 @@ - + BTO @@ -504490,12 +504106,20 @@ - + + + + - + + + + + + A parenchyma that is part of a lung. EMAPA:35522 FMA:27360 @@ -504507,22 +504131,6 @@ UBERON:0008946 lung parenchyma - - - - - - - - - FMA - - - - - - FMA - @@ -504837,12 +504445,6 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - - - - - FMA - @@ -504939,12 +504541,6 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.4/assets/3d-vh-f-lung.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.4/assets/3d-vh-m-lung.glb - - - - - FMA - @@ -505007,7 +504603,7 @@ - + Anterioinferior portion of left upper lung lobe. the lingula of the left lung in humans is not normally considered a true lobe @@ -505025,7 +504621,7 @@ UBERON:0008954 lingula of left lung - + @@ -505038,7 +504634,7 @@ - + ISBN:0123813611 @@ -505124,20 +504720,20 @@ - + A layer of new bone growth outside existing bone seen in pyogenic osteomyelitis. It results from the stripping off of the periosteum by the accumulation of pus within the bone, and new bone growing from the periosteum. Wikipedia:Involucrum UBERON:0008956 involucrum - + - + Wikipedia @@ -505153,20 +504749,20 @@ - + A piece of dead bone that has become separated during the process of necrosis from normal/sound bone.. Wikipedia:Sequestrum UBERON:0008957 sequestrum - + - + Wikipedia @@ -505182,7 +504778,7 @@ - + @@ -505199,14 +504795,14 @@ UBERON:0008958 cetacean involucrum - + - + Wikipedia:Evolution_of_cetaceans @@ -505222,9 +504818,9 @@ - - - + + + A hollow bony structure on the ventral, posterior portion of the skull of placental mammals that encloses parts of the middle and inner ear. In most species, it is formed by the tympanic part of the temporal bone. In extant primates, the structure is found in tarsiers, lemurs, and lorises[WP]. When present in marsupials, it usually forms the alisphenoid; in placentals variously constructed of ectotympanic, entotympanic, petrosal, or a combination of these and others may be formed from entotympanic and ectotympanic @@ -505240,34 +504836,34 @@ auditory bulla http://upload.wikimedia.org/wikipedia/commons/a/af/Toothed_whale_sound_production.png - + - + - + - + ISBN:0073040584 - + Wikipedia - + Rose @@ -505477,7 +505073,7 @@ - + An unpaired knot of nerves in The visceral sacs that innervates the pallial organs as well as the inner organs. BTO:0000022 @@ -505486,7 +505082,7 @@ UBERON:0008964 abdominal ganglion of visceral hump - + @@ -505499,7 +505095,7 @@ - + BTO @@ -505527,7 +505123,7 @@ - + The semioval center is the white matter found underneath the grey matter on the surface of the cerebrum. The term is synonymous with cerebral white matter. The white matter, located in each hemisphere between the cerebral cortex and nuclei, as a whole has a semioval shape. It consists of cortical projection fibers, association fibers and cortical fibers. WP suggests a merge with cerebral white matter BAMS:cw @@ -505549,14 +505145,14 @@ centrum semiovale http://upload.wikimedia.org/wikipedia/commons/9/95/Gray752.png - + - + FMA @@ -505680,8 +505276,8 @@ - - + + The distal portion of the colon; it develops embryonically from the hindgut and functions in the storage and elimination of waste. BTO:0000646 CALOHA:TS-0202 @@ -505693,24 +505289,24 @@ UBERON:0008971 left colon - + - + - + BTO - + BTO @@ -505738,8 +505334,8 @@ - - + + The proximal portion of the colon, extending from the ileocecal valve usually to a point proximal to the left colic flexure; it develops embryonically from the terminal portion of the midgut and functions in absorption. BTO:0000649 NCIT:C12383 @@ -505750,24 +505346,24 @@ UBERON:0008972 right colon - + - + - + BTO - + BTO @@ -505915,7 +505511,7 @@ - + @@ -505936,14 +505532,14 @@ pes anserinus of tibia https://upload.wikimedia.org/wikipedia/commons/b/b1/Pes_anserinus.png - + - + BTO @@ -506096,7 +505692,7 @@ - + @@ -506118,7 +505714,7 @@ fascia - + @@ -506131,7 +505727,7 @@ - + fasciae connect muscles to other muscles @@ -506162,12 +505758,20 @@ - + + + + - + + + + + + The functional tissue of the kidney, consisting of the nephrons. BTO:0003604 FMA:15574 @@ -506177,22 +505781,6 @@ UBERON:0008987 renal parenchyma - - - - - - - - - FMA - - - - - - FMA - @@ -506295,7 +505883,7 @@ - + The part of the chorion where the villi persist, forming the foetal part of the placenta. BTO:0003677 SCTID:37333001 @@ -506303,7 +505891,7 @@ UBERON:0008992 chorion frondosum - + @@ -506316,7 +505904,7 @@ - + BTO @@ -506571,7 +506159,7 @@ - + @@ -506585,14 +506173,14 @@ UBERON:0008999 hoof lamina - + - + BTO @@ -506695,7 +506283,7 @@ - + @@ -506718,14 +506306,14 @@ placental membrane - + - + BTO @@ -506937,7 +506525,7 @@ - + @@ -506960,14 +506548,14 @@ carotid sinus nerve - + - + FMA @@ -507198,7 +506786,7 @@ - + EMAPA:35241 FMA:312260 MA:0001239 @@ -507208,14 +506796,14 @@ UBERON:0009016 ciliary stroma - + - + MA @@ -507737,7 +507325,7 @@ - + @@ -507754,7 +507342,7 @@ sulcus ampullaris - + @@ -507767,7 +507355,7 @@ - + MA @@ -507800,7 +507388,7 @@ - + A germinal center that is located in a lymph node. germinal center @@ -507819,14 +507407,14 @@ lymph node germinal center - + - + MA @@ -507860,14 +507448,14 @@ - + - + The deep circumflex iliac artery (or deep iliac circumflex artery) is an artery in the pelvis that travels along the iliac crest of the pelvic bone. FMA:20687 @@ -507886,24 +507474,24 @@ http://upload.wikimedia.org/wikipedia/commons/0/07/Gray586.png http://upload.wikimedia.org/wikipedia/commons/7/74/Gray586.png - + - + - + FMA - + FMA @@ -507973,7 +507561,7 @@ - + The superficial iliac circumflex artery (or superficial circumflex iliac), the smallest of the cutaneous branches of the femoral artery, arises close to the superficial epigastric artery, and, piercing the fascia lata, runs lateralward, parallel with the inguinal ligament, as far as the crest of the ilium. It divides into branches which supply the integument of the groin, the superficial fascia, and the superficial subinguinal lymph glands, anastomosing with the deep iliac circumflex, the superior gluteal and lateral femoral circumflex arteries. FMA:20737 @@ -507988,14 +507576,14 @@ superficial circumflex iliac artery http://upload.wikimedia.org/wikipedia/commons/8/8b/Gray548.png - + - + FMA @@ -508683,19 +508271,19 @@ - + SCTID:62426003 UBERON:0009064 cervical air sac - + - + ISBN:0073040584 @@ -508706,7 +508294,7 @@ - + SCTID:17911004 cranial thoracic air sac @@ -508714,14 +508302,14 @@ UBERON:0009065 anterior thoracic air sac - + - + ISBN:0073040584 @@ -508738,21 +508326,21 @@ - + SCTID:10576005 caudal thoracic air sac caudal thoracic sac UBERON:0009066 posterior thoracic air sac - + - + ISBN:0073040584 @@ -508763,19 +508351,19 @@ - + SCTID:43701009 UBERON:0009067 abdominal air sac - + - + ISBN:0073040584 @@ -508998,20 +508586,20 @@ - + This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the inner medullar parallel to the descending limb KUPO:0001003 UBERON:0009089 inner medulla descending vasa recta - + - + KUPO @@ -509027,20 +508615,20 @@ - + This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the outer medullar parallel to the descending limb KUPO:0001004 UBERON:0009090 outer medulla descending vasa recta - + - + KUPO @@ -509056,7 +508644,7 @@ - + This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta parallel to the ascending limb KUPO:0001005 @@ -509064,14 +508652,14 @@ ascending vasa recta - + - + KUPO @@ -509087,20 +508675,20 @@ - + This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the inner medulla parallel to the ascending limb KUPO:0001006 UBERON:0009092 inner medulla ascending vasa recta - + - + KUPO @@ -509116,20 +508704,20 @@ - + This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta in the outer medulla parallel to the ascending limb KUPO:0001007 UBERON:0009093 outer medulla ascending vasa recta - + - + KUPO @@ -509145,7 +508733,7 @@ - + KUPO:0001009 papillary tip @@ -509154,14 +508742,14 @@ tip of renal papilla - + - + KUPO @@ -509560,7 +509148,7 @@ - + @@ -509573,14 +509161,14 @@ Genes: FOXN1 thymoid - + - + PMID:21293377 @@ -509643,21 +509231,21 @@ - + pouch Wikipedia:Pouch_(marsupial) marsupial pouch UBERON:0009118 marsupium - + - + we consider the fetus a type of or stage of the embryo @@ -509711,7 +509299,7 @@ - + @@ -509729,7 +509317,7 @@ gill filament - + @@ -509742,7 +509330,7 @@ - + ZFA @@ -509774,7 +509362,7 @@ - + @@ -509789,7 +509377,7 @@ - + @@ -509810,7 +509398,7 @@ UBERON:0009121 vomeronasal nerve - + @@ -509823,14 +509411,14 @@ - + - + Wikipedia @@ -509842,7 +509430,7 @@ - + ISBN:0471888893 @@ -509876,7 +509464,7 @@ - + The adenohypophyseal placode forms the anterior lobe of the pituitary gland and gives rise to the endocrine secretory cells of the pituitary. consider adding more detailed spatial placement - e.g. oral ectoderm and/or rostal ectoderm Fate-mapping studies in amphibian, chick and mouse embryos (Eagleson et al., 1986; 1995; Couly and Le Douarin, 1985; Cobos et al., 2001; Osumi-Yamachita et al., 1994; Kawamura et al., 2002) have shown that the cells contributing to the adenohypophysis develop at the midline of the anterior neural ridge, which delineates the rostral boundary of the neural plate, a region devoid of neural crest. The anterior neural ridge also gives rise to the olfactory placodes and some forebrain tissues including the olfactory bulbs (reviewed in Papalopulu, 1995). Ablation of this region in chick embryos at the 2-4 somite stage confirmed these lineage analyses as it prevented formation of Rathke's pouch and any further pituitary development (elAmraoui and Dubois, 1993). Upon head folding, the oral ectoderm cells of the adenohypophyseal placode invaginate towards the prospective ventral diencephalon to form Rathke's pouch, the anlage of the adenohypophysis. Rathke's pouch starts as an invagination of the oral ectoderm in response to inductive signals from the prospective diencephalon. The region of the diencephalon above the pouch is known as the infundibulum and forms the posterior lobe of the pituitary or neurohypohysis (Figure 3). While in most basal fish and tetrapods the adenohypophyseal anlagen invaginates to form Rathke's pouch, in teleost fish the adenohypophyseal placode does not invaginate but rather maintains its initial organization forming a solid structure in the head (reviewed in Pogoda and Hammerschmidt; 2009) @@ -509889,7 +509477,7 @@ adenohypophyseal placode - + @@ -509902,7 +509490,7 @@ - + ZFA @@ -510135,13 +509723,21 @@ - + + + + - + + + + + + Cranial ganglion which develops from an epibranchial placode. BTO:0006250 @@ -510153,22 +509749,6 @@ Epibranchial ganglia orchestrate the development of the cranial neurogenic crest epibranchial ganglion - - - - - - - - - ZFA - - - - - - NCBIBook:NBK53175 - @@ -510282,8 +509862,8 @@ - - + + Endocardium that is part of the right atrium. EHDAA2:0000274 FMA:7281 @@ -510296,24 +509876,24 @@ UBERON:0009129 right atrium endocardium - + - + - + EHDAA2 - + EHDAA2 @@ -510347,13 +509927,13 @@ - + RETIRED_EHDAA2:0000411 SCTID:361433003 UBERON:0009130 dorsal meso-duodenum - + @@ -510366,7 +509946,7 @@ - + EHDAA2 @@ -510389,8 +509969,8 @@ - - + + One of a group of three muscles fibularis (peronæus) longus, brevis, and tertius originating on the fibula and inserting on the metatarsals. EHDAA2:0001450 EHDAA:8297 @@ -510408,24 +509988,24 @@ peroneus - + - + - + wikipedia - + wikipedia @@ -510518,7 +510098,7 @@ - + only a vestige of the right duct in the adult hagfish (21)[PMID:20959416, S1] EHDAA2:0004535 FMA:70310 @@ -510527,7 +510107,7 @@ UBERON:0009138 right common cardinal vein - + @@ -510540,7 +510120,7 @@ - + EHDAA2 @@ -510706,7 +510286,7 @@ - + @@ -510722,14 +510302,14 @@ UBERON:0009142 entire embryonic mesenchyme - + - + EHDAA2 @@ -510770,21 +510350,21 @@ - + EMAPA:16549 RETIRED_EHDAA2:0001454 pharyngeal region UBERON:0009145 pharyngeal region of foregut - + - + EHDAA2 @@ -510904,8 +510484,8 @@ - - + + @@ -510918,11 +510498,11 @@ UBERON:0009191 sphenoid bone pre-cartilage condensation - + - + @@ -510941,13 +510521,13 @@ - + EHDAA2 - + EHDAA2 @@ -510965,24 +510545,24 @@ - - - + + + EHDAA2:0003447 EMAPA:18013 basi-sphenoid pre-cartilage condensation UBERON:0009192 basisphenoid pre-cartilage condensation - + - + - + @@ -510995,19 +510575,19 @@ - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -511077,8 +510657,8 @@ - - + + EHDAA2:0000166 EMAPA:18338 VHOG:0001338 @@ -511086,11 +510666,11 @@ UBERON:0009194 basisphenoid cartilage condenstion - + - + @@ -511103,13 +510683,13 @@ - + EHDAA2 - + EHDAA2 @@ -511125,8 +510705,8 @@ - - + + The dorsal part of the cloacal membrane following its partition by the urorectal septum. EHDAA2:0004018 NCIT:C34105 @@ -511136,24 +510716,24 @@ During the 7th week the urorectal septum divides the cloacal membrane into a urogenital membrane (ventrally) and an anal membrane (dorsally) [http://www.embryology.ch/anglais/ugenital/genitexterne01.html] anal membrane - + - + - + EHDAA2 - + EHDAA2 @@ -511212,7 +510792,7 @@ - + @@ -511227,7 +510807,7 @@ UBERON:0009197 basioccipital pre-cartilage condensation - + @@ -511240,7 +510820,7 @@ - + EHDAA2 @@ -511330,19 +510910,19 @@ - + Any suture between facial bones. UBERON:0009199 facial suture - + - + between two adjacent facial bones @@ -511427,7 +511007,7 @@ - + This class was created in order to align KUPO with CL. The original class was undefined, and the intended meaning is not clear, may be obsoleted in future. The vasa recta is parallel to the loop of Henles, this may refer to the portion of the vasa recta parallel to the descending limb KUPO:0001002 @@ -511435,14 +511015,14 @@ descending vasa recta - + - + KUPO @@ -511523,12 +511103,20 @@ - + + + + - + + + + + + Mesenchyme that is part of a medial nasal prominence. EHDAA2:0001077 @@ -511537,16 +511125,6 @@ UBERON:0009204 medial nasal process mesenchyme - - - - - - - - - EHDAA2 - @@ -511622,7 +511200,7 @@ - + @@ -511636,14 +511214,14 @@ UBERON:0009206 lateral nasal process surface ectoderm - + - + EHDAA2 @@ -511688,7 +511266,7 @@ - + @@ -511727,14 +511305,14 @@ each membrane is initially composed of an inner layer formed by the endodermal lining of a branchial pouch and an outer layer formed by the ectodermal lining of the branchial groove; later, these two layers become separated by a thin layer of mesoderm; only the first branchial membrane contributes to the formation of an adult structure, i.e. the tympanic membrane (aka eardrum); the second, third, and fourth membranes are obliterated[MP] pharyngeal membrane - + - + EMAPA @@ -511772,7 +511350,7 @@ - + @@ -511799,14 +511377,14 @@ UBERON:0009213 pharyngeal membrane of 1st arch - + - + EMAPA @@ -511846,7 +511424,7 @@ - + @@ -511867,14 +511445,14 @@ UBERON:0009215 pharyngeal membrane of 2nd arch - + - + EMAPA @@ -511906,7 +511484,7 @@ - + @@ -511927,14 +511505,14 @@ UBERON:0009216 pharyngeal membrane of 3rd arch - + - + EMAPA @@ -511966,7 +511544,7 @@ - + @@ -511985,14 +511563,14 @@ UBERON:0009217 pharyngeal membrane of 4th arch - + - + EMAPA @@ -512083,7 +511661,7 @@ - + EHDAA:4780 EMAPA:16802 FMA:313738 @@ -512093,14 +511671,14 @@ UBERON:0009293 embryonic frontal process - + - + EMAPA @@ -512143,7 +511721,7 @@ - + The posterior portion of the sphenoid bone developed in five separate parts consisting of a central basisphenoid, the two alisphenoids, and the two medial pterygoid laminae. FMA:321633 SCTID:95950009 @@ -512151,7 +511729,7 @@ UBERON:0009470 postsphenoidal bone - + @@ -512164,7 +511742,7 @@ - + cjm @@ -512181,7 +511759,7 @@ - + The superior surface of the tongue divided by the sulcus terminalis into an anterior two-thirds, the presulcal part (pars presulcalis). and a posterior one-third, the postsulcal part (pars postsulcalis). FMA:54651 @@ -512195,14 +511773,14 @@ dorsum of tongue - + - + FMA @@ -512242,7 +511820,7 @@ - + The axilla is the area directly under the joint where the forelimb connects to the shoulder. axillary CALOHA:TS-2208 @@ -512270,14 +511848,14 @@ axilla http://upload.wikimedia.org/wikipedia/commons/f/f2/Gray411.png - + - + FMA @@ -512367,7 +511945,7 @@ - + Either of a pair of fleshy lateral processes borne by most segments of a polychaete worm. Wikipedia:Parapodium paradpod @@ -512376,7 +511954,7 @@ UBERON:0009473 parapodium - + @@ -512389,7 +511967,7 @@ - + Wikipedia @@ -512446,7 +512024,7 @@ - + @@ -512458,14 +512036,14 @@ UBERON:0009476 madreporite - + - + BTO @@ -512530,7 +512108,7 @@ - + Mesenchyme that is part of a developing midgut. previously logically defined as mesenchyme of midgut, but this caused disjointness violations between dense and loose mesenchyme EHDAA2:0001186 @@ -512540,7 +512118,7 @@ associated mesenchyme of midgut - + @@ -512553,7 +512131,7 @@ - + EHDAA2 @@ -512824,7 +512402,7 @@ - + A portion of mesenchymal tissue associated with an individual pharyngeal arch. this represents a part of the entire arch mesenchyme (UBERON:0010046), and is therefore a superclass of the individual arch mesenchyme classes. Alternate definition: primordial embryonic connective tissue associated with the branchial arches, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to facial and cranial nerve-associated structures. EMAPA:32755 @@ -512835,7 +512413,7 @@ pharyngeal arch mesenchymal region - + @@ -512848,7 +512426,7 @@ - + cjm @@ -512883,21 +512461,21 @@ - + EHDAA2:0000172 EMAPA:16562 UBERON:0009495 extrahepatic part of biliary bud - + - + EHDAA2 @@ -512908,21 +512486,21 @@ - + EHDAA2:0000173 EMAPA:16563 UBERON:0009496 intrahepatic part of biliary bud - + - + EHDAA2 @@ -512945,14 +512523,14 @@ - + - + An epithelium that is part of a foregut-midgut junction. EHDAA2:0000573 EMAPA:16564 @@ -512960,24 +512538,24 @@ epithelium of foregut-midgut junction - + - + - + EHDAA2 - + EHDAA2 @@ -513023,8 +512601,8 @@ - - + + @@ -513042,24 +512620,24 @@ periotic mesenchyme - + - + - + XAO - + EHDAA2 @@ -513343,8 +512921,8 @@ - - + + Mesenchyme that is part of a developing middle ear. Also 1st arch maxillary mesenchyme in EHDAA2 otic mesenchyme @@ -513355,11 +512933,11 @@ mesenchyme of middle ear - + - + @@ -513372,13 +512950,13 @@ - + EHDAA2 - + EHDAA2 @@ -513505,7 +513083,7 @@ - + Mesenchyme that is part of a handplate. We group two EMAPA classes here but these may need to be separated EHDAA2:0000731 @@ -513517,14 +513095,14 @@ mesenchyme of handplate - + - + EHDAA2 @@ -513914,7 +513492,7 @@ - + @@ -513942,7 +513520,7 @@ UBERON:0009551 distal segment of digit - + @@ -513962,7 +513540,7 @@ - + cjm @@ -514407,8 +513985,8 @@ - - + + A nail, hoof or claw. MESH:D006724 hoof or claw @@ -514419,24 +513997,24 @@ UBERON:0009564 distal limb integumentary appendage - + - + - + cjm - + Wikipathways:WP2062 @@ -514463,8 +514041,8 @@ - - + + A nail that is part of a manual digit. EMAPA:35349 FMA:54327 @@ -514483,24 +514061,24 @@ nail of manual digit - + - + - + FMA - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -514582,21 +514160,21 @@ - + A submucosa that is part of a intestine. FMA:15696 submucosa of intestine UBERON:0009566 intestinal submucosa - + - + FMA @@ -514629,8 +514207,8 @@ - - + + A nail that is part of a pedal digit. EMAPA:36457 FMA:54328 @@ -514653,24 +514231,24 @@ nail of pedal digit - + - + - + FMA - + https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -514768,12 +514346,6 @@ - - - - - - @@ -515108,21 +514680,21 @@ - + A sulcus limitans of neural tube that is part of a future medulla oblongata. EHDAA2:0001100 EMAPA:17561 UBERON:0009576 medulla oblongata sulcus limitans - + - + EHDAA2 @@ -515330,7 +514902,7 @@ - + EFO:0003602 EMAPA:17579 MA:0003192 @@ -515341,14 +514913,14 @@ spinal cord lateral wall - + - + EMAPA @@ -515404,12 +514976,20 @@ - + + + + - + + + + + + Mesenchyme that is part of a 1st arch mandibular component. UBERON:0010043 EHDAA2:0000034 @@ -515421,16 +515001,6 @@ UBERON:0009584 1st arch mandibular mesenchyme - - - - - - - - - EMAPA - @@ -515498,13 +515068,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between manual digits 1 and 2. EHDAA2:0000846 EMAPA:17447 @@ -515513,16 +515091,6 @@ UBERON:0009586 mesenchyme of interdigital region between manual digits 1 and 2 - - - - - - - - - EMAPA - @@ -515552,13 +515120,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between manual digits 2 and 3. EHDAA2:0000849 EMAPA:17450 @@ -515567,16 +515143,6 @@ UBERON:0009587 mesenchyme of interdigital region between manual digits 2 and 3 - - - - - - - - - EMAPA - @@ -515606,13 +515172,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between manual digits 3 and 4. EHDAA2:0000852 EMAPA:17453 @@ -515621,16 +515195,6 @@ UBERON:0009588 mesenchyme of interdigital region between manual digits 3 and 4 - - - - - - - - - EMAPA - @@ -515660,13 +515224,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between manual digits 4 and 5. EHDAA2:0000855 EMAPA:17456 @@ -515675,16 +515247,6 @@ UBERON:0009589 mesenchyme of interdigital region between manual digits 4 and 5 - - - - - - - - - EMAPA - @@ -515714,13 +515276,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between pedal digits 1 and 2. EHDAA2:0000858 EMAPA:17478 @@ -515729,16 +515299,6 @@ UBERON:0009590 mesenchyme of interdigital region between pedal digits 1 and 2 - - - - - - - - - EMAPA - @@ -515768,13 +515328,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between pedal digits 2 and 3. EHDAA2:0000861 EMAPA:17481 @@ -515783,16 +515351,6 @@ UBERON:0009591 mesenchyme of interdigital region between pedal digits 2 and 3 - - - - - - - - - EMAPA - @@ -515822,13 +515380,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between pedal digits 3 and 4. EHDAA2:0000864 EMAPA:17484 @@ -515837,16 +515403,6 @@ UBERON:0009592 mesenchyme of interdigital region between pedal digits 3 and 4 - - - - - - - - - EMAPA - @@ -515876,13 +515432,21 @@ - + + + + - + + + + + + An interdigital region mesenchyme that is part of a interdigital region between pedal digits 4 and 5. EHDAA2:0000867 EMAPA:17487 @@ -515891,16 +515455,6 @@ UBERON:0009593 mesenchyme of interdigital region between pedal digits 4 and 5 - - - - - - - - - EMAPA - @@ -516107,21 +515661,21 @@ - + An interdigital region mesenchyme that is part of a manus. EMAPA:32653 mesenchyme of interdigital region of forelimb UBERON:0009600 mesenchyme of interdigital region of manus - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -516150,21 +515704,21 @@ - + An interdigital region mesenchyme that is part of a pes. EMAPA:32955 mesenchyme of interdigital region of hindlimb UBERON:0009601 mesenchyme of interdigital region of pes - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -516267,9 +515821,9 @@ - + - + @@ -516282,7 +515836,7 @@ UBERON:0009610 forebrain neural plate - + @@ -516291,20 +515845,20 @@ - + - + ZFA - + ZFA @@ -516319,9 +515873,9 @@ - + - + @@ -516334,7 +515888,7 @@ UBERON:0009611 midbrain neural plate - + @@ -516343,20 +515897,20 @@ - + - + ZFA - + ZFA @@ -516372,19 +515926,19 @@ - - + + TAO:0007020 ZFA:0007020 diencephalic-mesencephalic boundary neural plate UBERON:0009612 forebrain midbrain boundary neural plate - + - + @@ -516397,13 +515951,13 @@ - + ZFA - + ZFA @@ -516418,9 +515972,9 @@ - + - + @@ -516433,7 +515987,7 @@ UBERON:0009614 hindbrain neural plate - + @@ -516442,20 +515996,20 @@ - + - + ZFA - + ZFA @@ -516471,8 +516025,8 @@ - - + + TODO - developmental relationships for lines TAO:0007044 ZFA:0007044 @@ -516481,24 +516035,24 @@ UBERON:0009615 midbrain hindbrain boundary neural plate - + - + - + ZFA - + https://github.com/obophenotype/uberon/issues/438 Bgee:AN @@ -516532,14 +516086,14 @@ - + - + @@ -516563,24 +516117,24 @@ presumptive midbrain - + - + - + ZFA - + ZFA @@ -516626,7 +516180,7 @@ - + Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles. A major contributor to neurocranium [PMID:16313393] EHDAA2:0000736 @@ -516642,14 +516196,14 @@ UBERON:0009617 head paraxial mesoderm - + - + EHDAA2 @@ -516702,21 +516256,21 @@ - + EHDAA2:0002094 trunk and cervical paraxial mesenchyme trunk paraxial mesenchyme UBERON:0009618 trunk paraxial mesoderm - + - + EHDAA2 @@ -516739,23 +516293,23 @@ - + - + EHDAA2:0003239 UBERON:0009620 tail bud paraxial mesoderm - + - + @@ -516768,13 +516322,13 @@ - + EHDAA2 - + EHDAA2 @@ -516833,7 +516387,7 @@ - + A proximal straight tubule that is part of a pronephros. TAO:0002239 ZFA:0001621 @@ -516841,14 +516395,14 @@ UBERON:0009622 pronephric proximal straight tubule - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -516930,12 +516484,6 @@ spinal nerve root https://github.com/obophenotype/uberon/issues/2644 - - - - - FMA - @@ -517126,7 +516674,7 @@ - + @@ -517146,14 +516694,14 @@ coccygeal nerve http://upload.wikimedia.org/wikipedia/commons/d/d1/Gray802.png - + - + FMA-abduced-lr @@ -517506,8 +517054,8 @@ - - + + Chondrocranium chondrification center that fuses with cartilages derived from sclerotome region of occipital somites forming occipital bone, hypoglossal canals and foramen magnum. Rod-shaped paired cartilages on either side of the notochord. They unite, forming the base of the chondrocranium and are replaced by the prootic bones.[TAO] NCIT:C34243 @@ -517518,11 +517066,11 @@ UBERON:0009635 parachordal cartilage - + - + @@ -517535,13 +517083,13 @@ - + ZFA - + ZFA @@ -517624,10 +517172,10 @@ - - - - + + + + The body of the sphenoid bone, more or less cubical in shape, is hollowed out in its interior to form two large cavities, the sphenoidal air sinuses, which are separated from each other by a septum. FMA:52867 SCTID:140491003 @@ -517642,44 +517190,44 @@ body of sphenoid http://upload.wikimedia.org/wikipedia/commons/d/d5/Gray146.png - + - + - + - + - + FMA - + FMA - + ISBN:1588903958 - + ISBN:1588903958 @@ -517744,7 +517292,7 @@ - + The ansa lenticularis (ansa lentiformis in older texts) is a part of the brain, making up the superior layer of the substantia innominata of Meynert. Its fibers, derived from the medullary lamina of the lentiform nucleus, pass medially to end in the thalamus and subthalamic region, while others are said to end in the tegmentum and red nucleus. It is classified by NeuroNames as part of the subthalamus. BAMS:al DHBA:10571 @@ -517761,14 +517309,14 @@ ansa lenticularis http://upload.wikimedia.org/wikipedia/commons/9/94/DA-loops_in_PD.jpg - + - + FMA @@ -517813,8 +517361,8 @@ - - + + A pathway containing fibers from midbrain nuclei that project to the inferior olivary complex, as well as fibers originating in the pontine reticular formation and the medullary reticular formation that project to several nuclei of the thalamus. It can be identified in the midbrain and the pons (Adapted from Brain Info). The central tegmental tract is a structure in the midbrain and pons. The central tegmental tract includes ascending axonal fibers which arise from the rostral nucleus solitarius and terminate in the ventral posteromedial nucleus (VPM) of thalamus. Information from the thalamus will go to cortical taste area, namely the insula and frontal operculum. It also contains descending axonal fibers from the parvocellular red nucleus. The descending axons will project to the inferior olivary nucleus. This latter pathway will be used to connect the contralateral cerebellum[Wikipedia:Central_tegmental_tract]. BAMS:ctg @@ -517829,11 +517377,11 @@ central tegmental tract http://upload.wikimedia.org/wikipedia/commons/f/f7/Midbrainsuperiorcolliculus.png - + - + @@ -517846,13 +517394,13 @@ - + NIFSTD - + NIFSTD @@ -518152,7 +517700,7 @@ - + The portions of renal substance (cortex) intervening between the bases of the pyramids and the capsule of the kidney. EMAPA:37486 FMA:17876 @@ -518166,14 +517714,14 @@ UBERON:0009650 cortical arch of kidney - + - + MA @@ -518236,7 +517784,7 @@ - + A basement membrane that is part of a nephron tubule. EMAPA:37490 MA:0001680 @@ -518249,14 +517797,14 @@ UBERON:0009651 nephron tubule basement membrane - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -518308,7 +517856,7 @@ - + A basement membrane that is part of a bronchus. MA classifies as type of connective tissue: https://github.com/obophenotype/mouse-anatomy-ontology/issues/108 EMAPA:37809 @@ -518319,14 +517867,14 @@ UBERON:0009652 bronchus basement membrane - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -518378,8 +517926,8 @@ - - + + A basement membrane that is part of a trachea. EMAPA:37552 MA:0001854 @@ -518388,25 +517936,25 @@ UBERON:0009653 trachea basement membrane - + - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships - + MA-modified @@ -518789,7 +518337,7 @@ - + EHDAA2:0004566 EMAPA:32911 MA:0003203 @@ -518799,14 +518347,14 @@ gut mesentery https://github.com/obophenotype/uberon/issues/509 - + - + EHDAA2 @@ -518828,7 +518376,7 @@ - + Ventral mesentery is the part of the peritoneum closest to the navel. degenerates during development except foregut portion EHDAA2:0004569 @@ -518837,14 +518385,14 @@ UBERON:0009668 ventral mesentery - + - + EHDAA2 @@ -518912,8 +518460,8 @@ - - + + @@ -518929,24 +518477,24 @@ UBERON:0009670 rectal lumen - + - + - + cjm - + EHDAA2 @@ -518969,8 +518517,8 @@ - - + + @@ -518983,24 +518531,24 @@ UBERON:0009671 nasal fin - + - + - + EHDAA2 - + EHDAA2 @@ -519016,9 +518564,9 @@ - - - + + + The oronasal membrane separates the oral cavity and nasal cavity. split into two? In humans, the oronasal membrane ruptures during the seventh week, producing a single, large oronasal cavity @@ -519030,15 +518578,15 @@ UBERON:0009672 oronasal membrane - + - + - + @@ -519051,19 +518599,19 @@ - + EHDAA2 - + EHDAA2 - + posterior portion EHDAA2 @@ -519180,7 +518728,7 @@ - + The chorda tympani is a nerve that branches from the facial nerve (cranial nerve VII) inside the facial canal, just before the facial nerve exits the skull via the stylomastoid foramen. Chorda tympani is a branch of the facial nerve (the seventh cranial nerve) that serves the taste buds in the front of the tongue, runs through the middle ear, and carries taste messages to the brain. The chorda tympani is part of one of three cranial nerves that are involved in taste. The taste system involves a complicated feedback loop, with each nerve acting to inhibit the signals of other nerves. The chorda tympani appears to exert a particularly strong inhibitory influence on other taste nerves, as well as on pain fibers in the tongue. When the chorda tympani is damaged, its inhibitory function is disrupted, leading to less inhibited activity in the other nerves. EHDAA2:0000490 @@ -519204,14 +518752,14 @@ chorda tympani branch of facial nerve - + - + EHDAA2 @@ -519275,8 +518823,8 @@ - - + + EFO:0003562 EHDAA2:0001981 EHDAA:1993 @@ -519288,24 +518836,24 @@ early telencephalic vesicle - + - + - + EHDAA2 - + EHDAA2 @@ -519592,8 +519140,8 @@ - - + + The posterior inferior cerebellar artery (PICA), the largest branch of the vertebral, is one of the three main arterial blood supplies for the cerebellum. @@ -519608,24 +519156,24 @@ posterior inferior cerebellar artery - + - + - + FMA - + EHDAA2 @@ -519660,7 +519208,7 @@ - + A basilar artery branch that supplies the anterior portion of the inferior surface of the cerebellum. EHDAA2:0000587 @@ -519674,14 +519222,14 @@ anterior inferior cerebellar artery - + - + EHDAA2 @@ -519733,8 +519281,8 @@ - - + + An organ cavity that is part of a pharyngotympanic tube. Check relationships for conformance with AAO and XAO EHDAA2:0004118 @@ -519746,11 +519294,11 @@ UBERON:0009692 lumen of pharyngotympanic tube - + - + @@ -519763,13 +519311,13 @@ - + cjm - + EHDAA2/Kardong @@ -519812,13 +519360,21 @@ - + + + + - - + + + + + + + An epithelium that is part of a hypopharynx. EHDAA2:0004575 FMA:62454 @@ -519827,24 +519383,14 @@ UBERON:0009695 epithelium of laryngopharynx - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -519883,14 +519429,14 @@ - + - + An epithelium that is part of a vermiform appendix. CALOHA:TS-2062 EHDAA2:0004561 @@ -519900,24 +519446,24 @@ UBERON:0009697 epithelium of appendix - + - + - + EHDAA2 - + EHDAA2 @@ -519946,9 +519492,9 @@ - - - + + + EHDAA2:0001371 pancreatis dorsalis @@ -519957,15 +519503,15 @@ dorsal pancreas - + - + - + @@ -519978,19 +519524,19 @@ - + EHDAA2 - + EHDAA2 - + cjm @@ -520001,9 +519547,9 @@ - - - + + + EHDAA2:0001393 pancreatis ventralis @@ -520012,15 +519558,15 @@ ventral pancreas - + - + - + @@ -520033,19 +519579,19 @@ - + EHDAA2 - + EHDAA2 - + cjm @@ -520072,8 +519618,8 @@ - - + + Any endocardium that is part of the right ventricle of the heart. Endocardium of ventricle which is continuous tricuspid valve, pulmonary valve and with the tunica intima of the pulmonary trunk. EHDAA2:0002188 @@ -520089,24 +519635,24 @@ UBERON:0009712 endocardium of right ventricle - + - + - + EHDAA2 - + FMA @@ -520169,7 +519715,7 @@ - + Any endocardium that is part of the left ventricle of the heart. Endocardium of ventricle which is continuous with mitral valve, aortic valve, atrioventricular septum and the tunica intima of the aorta. EHDAA2:0002182 @@ -520184,14 +519730,14 @@ UBERON:0009713 endocardium of left ventricle - + - + FMA @@ -520237,8 +519783,8 @@ - - + + The primordial mass of tissue formed by the merging of the medial nasal prominences of the embryo; it contributes to the intermaxillary portion of the upper jaw, the prolabial portion of the upper lip, and the primary palate. requires verification. Note EHDAA2 has this as coming from both lateral and medial prominences. See also: median cleft lip EHDAA2:0000868 @@ -520251,11 +519797,11 @@ UBERON:0009714 intermaxillary process - + - + @@ -520268,14 +519814,14 @@ - + inconsistent EHDAA2 - + EHDAA2 @@ -520504,7 +520050,7 @@ - + @@ -520518,14 +520064,14 @@ UBERON:0009722 entire pharyngeal arch endoderm - + - + EHDAA2 @@ -521289,7 +520835,7 @@ - + EMAPA:35113 FMA:69086 MA:0001887 @@ -521299,14 +520845,14 @@ UBERON:0009753 adrenal gland cortex zone - + - + MA @@ -521616,7 +521162,7 @@ - + the left duct atrophies at metamorphosis in the lamprey (22)[PMID:20959416, S1] EHDAA2:0000304 FMA:70311 @@ -521625,7 +521171,7 @@ UBERON:0009769 left common cardinal vein - + @@ -521638,7 +521184,7 @@ - + EHDAA2 @@ -521826,7 +521372,7 @@ - + A nuclear complex of the medullary reticular formation that can be divided into three subnuclei: the parvocellular, magnocellular and the subtrigeminal[WP,modified]. BAMS:LMRt FMA:72573 @@ -521840,7 +521386,7 @@ The lateral reticular nucleus, of the funiculus, can be divided into three subnuclei, the parvocellular, magnocellular and the subtrigeminal. As is typical of the reticular formation, none of these are very distinct subnuclei, but rather blurred distinctions between cell types and location. The lateral reticular nucleus sends all of its projections to the cerebellum. The parvocellular portion of the LRN and the immediately adjacent magnocellular portion send most their projections to the vermis of the cerebellum. The rest of the magnocellular subnucleus sends its projections to the hemisphere regions of the cerebellum. The subtrigeminal nucleus sends its projections to the flocculonodular lobe. All of these efferent pathways are projected in an ipsilateral manner to the cerebellum, the most abundant of which are those to the vermis. This nucleus is also involved in the mediation of inspiration (in-breathing) with a part of the ventral r. nucleus. The afferent pathways to the LRN come from the spinal cord and higher brain structures. Most of the afferents come from the ipsilateral dorsal horn of the spinal cord and project exclusively to the parts of the LRN that do not receive input from the cortex. The spinal cord projections terminate mostly in the parvocellular region along with the adjacent magnocellular cells. This implies that most input from the spinal cord is relayed into the vermis[WP] lateral medullary reticular complex - + @@ -521853,7 +521399,7 @@ - + FMA @@ -521896,7 +521442,7 @@ - + https://sourceforge.net/tracker/?func=detail&atid=440764&aid=3413098&group_id=36855 TAO:0000219 ZFA:0000219 @@ -521904,7 +521450,7 @@ UBERON:0009776 intermediate reticular formation - + @@ -521917,7 +521463,7 @@ - + GOC:pr brainspan.org @@ -521991,7 +521537,7 @@ - + @@ -522004,7 +521550,7 @@ - + A serous sac that has the pleura and the pleural cavity as parts. despite its name the class EHDAA2:0004737 is not a true cavity, it corresponds to what we call the sac EHDAA2:0004737 @@ -522014,24 +521560,24 @@ pleural sac - + - + - + FMA - + FMA-abduced-lr @@ -522220,8 +521766,8 @@ - - + + The frontal part of the cingulate cortex that resembles a collar form around the corpus callosum. It includes both the ventral and dorsal areas of the cingulate cortex. Wikipedia:File:Gray727.svg. BIRNLEX:936 @@ -522233,24 +521779,24 @@ anterior cingulate cortex http://upload.wikimedia.org/wikipedia/commons/2/22/Gray727_anterior_cingulate_cortex.png - + - + - + BTO - + Wikipedia @@ -522336,14 +521882,14 @@ - - - - - - - - + + + + + + + + Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus. DHBA:10666 TAO:0001441 @@ -522354,84 +521900,84 @@ lower rhombic lip - + - + - + - + - + - + - + - + - + ZFA - + ZFA - + ZFA - + ZFA - + ZFA - + ZFA - + ZFA - + ZFA @@ -522453,9 +521999,9 @@ - - - + + + Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary. DHBA:10665 EHDAA2:0000229 @@ -522470,34 +522016,34 @@ upper rhombic lip - + - + - + - + ZFA - + ZFA - + ZFA-def @@ -522666,7 +522212,7 @@ - + @@ -522684,14 +522230,14 @@ UBERON:0009844 urogenital sinus lumen - + - + EHDAA2 @@ -522706,7 +522252,7 @@ - + @@ -522721,7 +522267,7 @@ UBERON:0009845 urogenital sinus mesenchyme - + @@ -522733,7 +522279,7 @@ - + PMID:18977204 @@ -522775,32 +522321,32 @@ - - + + An epithelium that is part of a embryonic cloaca. cloacal epithelium EHDAA2:0004585 UBERON:0009846 embryonic cloacal epithelium - + - + - + EHDAA2 - + EHDAA2 @@ -522835,8 +522381,8 @@ - - + + @@ -522848,24 +522394,24 @@ UBERON:0009847 prostate field - + - + - + PMID:18977204 - + PMID:18977204 @@ -522898,7 +522444,7 @@ - + @@ -522926,14 +522472,14 @@ UBERON:0009848 zona limitans intrathalamica - + - + ZFA @@ -523171,7 +522717,7 @@ - + @@ -523201,14 +522747,14 @@ body of uterus https://cdn.humanatlas.io/digital-objects/ref-organ/uterus-female/v1.2/assets/3d-vh-f-uterus.glb - + - + FMA @@ -523448,8 +522994,8 @@ - - + + @@ -523465,24 +523011,24 @@ UBERON:0009858 outer fibrous layer of periosteum - + - + - + FMA - + Wikipedia @@ -523730,20 +523276,20 @@ - + An unpaired kidney whose duct opens into the anterior pharynx. It can be seen as a deep ciliated fossa on the dorsal midline of the buccal cavity (mouth). Among other things, it secrets mucus which entraps food particles from the water[WP]. UBERON:0009866 Hatschek's nephridium - + - + Wikipedia @@ -523765,18 +523311,18 @@ - + UBERON:0009867 Hatschek's diverticulum - + - + Wikipedia @@ -523993,7 +523539,7 @@ - + @@ -524020,14 +523566,14 @@ UBERON:0009877 metapodium region - + - + PHENOSCAPE:ni @@ -524477,7 +524023,7 @@ - + EFO:0003704 TAO:0005041 @@ -524487,14 +524033,14 @@ anterior lateral plate mesoderm - + - + ZFA @@ -524572,7 +524118,7 @@ - + @@ -524601,7 +524147,7 @@ medullary ray - + @@ -524614,7 +524160,7 @@ - + MP @@ -524880,9 +524426,9 @@ - - - + + + @@ -524901,34 +524447,34 @@ UBERON:0009889 secondary heart field - + - + - + - + GO:0003129 - + PMID:17276708 - + PMID:17276708 @@ -525384,7 +524930,7 @@ - + EFO:0003705 TAO:0005042 ZFA:0005042 @@ -525393,7 +524939,7 @@ posterior lateral plate mesoderm - + @@ -525406,7 +524952,7 @@ - + ZFA @@ -525596,7 +525142,7 @@ - + @@ -525634,14 +525180,14 @@ Alternate definition: One of the subdivisions of the kidney, consisting of a medullary ray and that portion of the convoluted port (renal corpuscles and convoluted tubules) associated with its collecting duct. -http://www.mondofacto.com/facts/dictionary?lobulus+corticalis+renalis renal lobule - + - + FMA @@ -525794,7 +525340,7 @@ - + @@ -525819,14 +525365,14 @@ kidney corticomedullary boundary - + - + MP @@ -525928,13 +525474,13 @@ - + EHDAA2:0001315 EHDAA:1122 UBERON:0009920 optic neural crest - + @@ -525947,7 +525493,7 @@ - + EHDAA2 @@ -526031,7 +525577,7 @@ - + The main olfactory bulb has a multi-layered cellular architecture. In order from surface to the center the layers are: Glomerular layer, External plexiform layer, Mitral cell layer, Internal plexiform layer, Granule cell layer[WP]. @@ -526045,14 +525591,14 @@ UBERON:0009951 main olfactory bulb - + - + cjm @@ -526104,7 +525650,7 @@ - + A narrow layer of cells located between the granule cell layer and hilus of the dentate gyrus, where adult neurogenesis occurs. SGZ EMAPA:35831 @@ -526117,14 +525663,14 @@ dentate gyrus subgranular zone https://upload.wikimedia.org/wikipedia/commons/9/99/Doublecortin_expression-2.png - + - + granule cells Wikipedia @@ -526224,20 +525770,20 @@ - + A vertebrate nasal chemosensory system that is responsible for detecting intraspecific pheromonal cues as well as environmental odorants. check relationship to olfactory system. Evolution: The morphological components of the VNS are found only in tetrapods, but the genetic components of the system have been found in teleost fish, in addition to tetrapods. In tetrapods, the VNS was thought to be the olfactory system for detecting pheromones, while the main olfactory system detected general odorants (Scalia and Winans 1975). However, experimental evidence suggests that there is not such a clear functional distinction (Restrepo et al. 2004; Baxi, Dorries, and Eisthen 2006; Spehr et al. 2006; Kelliher 2007). Sea lampreys produce unique bile acids which act as pheromones both in migration and mate finding (Li, Sorensen, and Gallaher 1995; Li et al. 2002; Siefkes and Li 2004). However, bile acids in teleost fish are known to require components of the main olfactory signal transduction pathway (Hansen et al. 2003), and interruption of the VNS signal transduction pathway had no effect on bile acid olfactory response (Hansen et al. 2003)[Grus - EVOLUTION OF THE VOMERONASAL SYSTEM VIEWED THROUGH SYSTEM-SPECIFIC GENES] UBERON:0009954 vomeronasal system - + - + Wikipedia @@ -526351,20 +525897,20 @@ - + A specialised sensory organ located in the subepidermal connective tissue at the rostral end of late larval and adult amphioxus. They consist of between 1 and 4 nerve cells with axons, each with 2 cilia, surrounded by up to 7 sheath cells. The cilia extend into a protrusion of the basal lamina which surrounds each corpuscle. The axonal process contributes to the rostral nerve. organ of de Quatrefage UBERON:0009956 corpuscle of de Quatrefage - + - + PMID:11523831 @@ -526380,20 +525926,20 @@ - + pre-oral pit UBERON:0009957 Development: joins with Hatschek's diverticulum to form Hatschek's pit in the adult. Location: anterior to the mouth. ciliated pit - + - + Wikipedia @@ -526402,9 +525948,9 @@ - + - + @@ -526423,7 +525969,7 @@ UBERON:0009958 bladder lumen - + @@ -526432,20 +525978,20 @@ - + - + FMA - + EHDAA2 @@ -526502,7 +526048,7 @@ - + @@ -526517,14 +526063,14 @@ UBERON:0009959 lumen of oropharynx - + - + EHDAA2 @@ -526563,7 +526109,7 @@ - + A circular muscle layer of muscular coat that is part of a esophagus. EMAPA:37523 FMA:67605 @@ -526574,14 +526120,14 @@ UBERON:0009960 esophagus smooth muscle circular layer - + - + MA @@ -526621,7 +526167,7 @@ - + EMAPA:37524 FMA:63573 MA:0001575 @@ -526631,14 +526177,14 @@ UBERON:0009961 esophagus smooth muscle longitudinal layer - + - + MA @@ -526810,7 +526356,7 @@ - + A conducting pathway in the conducting tissue of heart through which electrical activity spreads from the SA node to the AV node. include 3 subtypes? evidence is sparse [http://www.gpnotebook.co.uk/simplepage.cfm?ID=-483065798] There is some functional evidence for the existence of specialized conducting pathways within the atria (termed internodal tracts), although this is controversial @@ -526824,7 +526370,7 @@ internodal tract - + @@ -526837,7 +526383,7 @@ - + FMA @@ -526872,7 +526418,7 @@ - + EMAPA:37751 FMA:62815 MA:0000761 @@ -526886,7 +526432,7 @@ spleen venous sinus - + @@ -526899,7 +526445,7 @@ - + MA @@ -526947,8 +526493,8 @@ - - + + consider merging into developed structure EHDAA2:0001527 EHDAA:9876 @@ -526956,11 +526502,11 @@ UBERON:0009968 primitive superior sagittal sinus - + - + @@ -526973,13 +526519,13 @@ - + EHDAA2 - + EHDAA2 @@ -527171,7 +526717,7 @@ - + @@ -527202,14 +526748,14 @@ ureteropelvic junction - + - + MP @@ -527253,7 +526799,7 @@ - + @@ -527285,14 +526831,14 @@ ureterovesical junction - + - + MP @@ -527332,7 +526878,7 @@ - + @@ -527346,7 +526892,7 @@ UBERON:0009974 lumen of Rathke's pouch - + @@ -527359,7 +526905,7 @@ - + EHDAA2-modified @@ -527866,7 +527412,7 @@ - + The lateral epicondyle of the femur, smaller and less prominent than the medial epicondyle, gives attachment to the fibular collateral ligament of the knee-joint. Directly below it is a small depression from which a smooth well-marked groove curves obliquely upward and backward to the posterior extremity of the condyle. @@ -527883,7 +527429,7 @@ lateral epicondyle of femur http://upload.wikimedia.org/wikipedia/commons/5/53/Gray246.png - + @@ -527896,7 +527442,7 @@ - + FMA @@ -527946,7 +527492,7 @@ - + The medial epicondyle of the femur is a bony protrusion located on the medial side of the bone's distal end. Located above the medial condyle, it bears an elevation, the adductor tubercle, which serves for the attachment of the superficial part, or 'tendinous insertion', of the adductor magnus. This tendinous part here forms an intermuscular septum which forms the medial separation between the thigh's flexors and extensors. Behind it, and proximally to the medial condyle is a rough impression which gives origin to the medial head of the Gastrocnemius. FMA:32864 @@ -527961,7 +527507,7 @@ medial epicondyle of femur http://upload.wikimedia.org/wikipedia/commons/e/e0/Gray345.png - + @@ -527974,7 +527520,7 @@ - + FMA @@ -528572,7 +528118,7 @@ - + @@ -528586,14 +528132,14 @@ placental labyrinth villous - + - + MP @@ -528616,7 +528162,7 @@ - + @@ -528628,14 +528174,14 @@ placenta intervillous maternal lacunae - + - + MP @@ -528652,7 +528198,7 @@ - + @@ -528664,14 +528210,14 @@ placenta fetal blood space - + - + MP @@ -528787,7 +528333,7 @@ - + A group of neurons in the basal forebrain that has wide projections to the neocortex and is rich in acetylcholine and choline acetyltransferase. It undergoes degeneration in paralysis agitans and Alzheimer's disease. rich in acetylcholine and choline acetyltransferase MA has basal nucleus as synonym for BG. @@ -528829,14 +528375,14 @@ basal nucleus of telencephalon http://upload.wikimedia.org/wikipedia/commons/3/36/Substantia_innominata_MRI.PNG - + - + WP @@ -528994,14 +528540,14 @@ - + - + Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum. it is necessary to introduce two classes, one representing an individual basal ganglion, another representing the aggregate structure, in order to have consistent classification amongst AOs (e.g. in MA the aygdala is part of the BG, in FMA and BTO it is a subclass). Apart from achieving this consistency, the value of having two distinct classes is questionable, since the BG-plural is trivially the collection of all BGs-singular. it would be better for all AOs to decide on one single way of doing this. Do not merge until this is done. @@ -529035,11 +528581,11 @@ collection of basal ganglia - + - + @@ -529052,13 +528598,13 @@ - + FMA - + MA NIF @@ -529209,38 +528755,38 @@ - + - + An elongate paired tissue ventral to the kidneys and partialy enveloping the anterior gonads in Elasmobranchii. Apparently important to the immune system. subgonal organ UBERON:0010014 epigonal organ - + - + - + Wikipedia - + Honma1983 @@ -529392,8 +528938,8 @@ - - + + The spiral valve alternately blocks & unblocks the entrances to the left and right pulmonary arches (sending unoxygenated blood to the skin & lungs). The spiral valve is considered to have evolved from the right member of the four embryonic endocardial ridges (Goodrich, 1930 - via Morris 1974) @@ -529403,11 +528949,11 @@ UBERON:0010018 spiral valve of conus arteriosus - + - + @@ -529420,13 +528966,13 @@ - + AAO - + NAS @@ -529514,7 +529060,7 @@ - + The dorsal portion of the embryonic first endodermal pharyngeal pouch; it develops into the middle ear cavity. The tympanic cavity and auditory tube of an amniote develop from the first embryonic pharyngeal pouch, so they are homologous to the first gill pouch, or spiracle, of a fish. We are uncertain whether this homology strictly applies to the middle ear cavity and auditory tube of lissamphibians, which show certain peculiarities in their development.[well established][VHOG] EHDAA2:0004115 @@ -529529,7 +529075,7 @@ UBERON:0010020 tubotympanic recess epithelium - + @@ -529542,7 +529088,7 @@ - + EHDAA2 ISBN:0073040584 PMID:11237469 @@ -529705,7 +529251,7 @@ - + Derivatives of the dorsal wings include the inferior parathyroid glands[WP] in mammals, the cranial dorsal aspect of the third pouch generates the inferior parathyroids (or parathyroid III) EHDAA2:0000409 EMAPA:16758 @@ -529719,7 +529265,7 @@ UBERON:0010025 dorsal part of pharyngeal pouch 3 - + @@ -529732,7 +529278,7 @@ - + EHDAA2 @@ -529762,7 +529308,7 @@ - + The ventral wings fuse to form the cytoreticular cells of the thymus[WP] the caudal ventral part of the pouch gives rise to the thymus epithelium EHDAA2:0002173 EMAPA:16759 @@ -529776,7 +529322,7 @@ UBERON:0010026 ventral part of pharyngeal pouch 3 - + @@ -529789,7 +529335,7 @@ - + EHDAA2 @@ -529944,7 +529490,7 @@ - + @@ -529982,7 +529528,7 @@ anterior part of tongue https://upload.wikimedia.org/wikipedia/commons/4/4c/Illu04_tongue.jpg - + @@ -529998,7 +529544,7 @@ - + ISBN:1607950324 @@ -530093,8 +529639,8 @@ - - + + The Posterior tongue, or pharyngeal part, is the part of the tongue behind the terminal sulcus. At its root, it is directed backward, and connected with the hyoid bone by the Hyoglossi and Genioglossi muscles and the hyoglossal membrane; with the epiglottis by three folds (glossoepiglottic) of mucous membrane; with the soft palate by the glossopalatine arches; and with the pharynx by the Constrictores pharyngis superiores and the mucous membrane. It is derived primarily from the third pharyngeal arch. (The second arch has a substantial contribution during fetal development, but this later atrophies. The fourth arch may also contribute, depending upon how the boundaries of the tongue are defined.). EMAPA:37438 FMA:54645 @@ -530123,24 +529669,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb https://upload.wikimedia.org/wikipedia/commons/4/4c/Illu04_tongue.jpg - + - + - + FMA - + Wikipedia @@ -530255,7 +529801,7 @@ - + @@ -530273,7 +529819,7 @@ copula linguae http://upload.wikimedia.org/wikipedia/commons/8/85/Gray980.png - + @@ -530286,7 +529832,7 @@ - + EHDAA2 @@ -530316,7 +529862,7 @@ - + A group of cells located ventral to the decussation of the superior cerebellar peduncle in the mouse ( Paxinos-2001 ) and rat ( Swanson-1998 ). BAMS:AT BAMS:ATg @@ -530328,7 +529874,7 @@ UBERON:0010036 anterior tegmental nucleus - + @@ -530341,7 +529887,7 @@ - + NN @@ -530381,8 +529927,8 @@ - - + + The fundus glands (or fundic glands, or gastric glands) are found in the body and fundus of the stomach. They are simple tubes, two or more of which open into a single duct. Consider FMA:14923 ! Principal gland of fundus of stomach. Added part_of to mucosa to be consistent with FMA pattern (note that Kardong places this in the glandular epithelium) EMAPA:27161 @@ -530400,24 +529946,24 @@ fundic gastric gland http://upload.wikimedia.org/wikipedia/commons/d/d7/Fundic_gland_polyp_%281%29.jpg - + - + - + ISBN:0073040584 - + ISBN:0073040584 @@ -530637,8 +530183,8 @@ - - + + The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells. EHDAA2:0001459 EMAPA:16550 @@ -530649,11 +530195,11 @@ UBERON:0010046 entire pharyngeal arch associated mesenchyme - + - + @@ -530666,13 +530212,13 @@ - + EHDAA2 - + cjm @@ -530763,21 +530309,21 @@ - + A gland situated on the upper lip posterior to the eye, found in non-venomous snakes. Releases secretion via duct adjacent to posterior maxillary teeth. Wikipedia:Duvernoy's_gland UBERON:0010048 positioned posterior to the eye, encased in a thin cover of connective tissue, and consists mostly of serous cells. A single, short duct extends anteromedially from the lumen of the gland to the base of the posterior fangs.[WP] Duvernoy's gland - + - + Wikipedia @@ -531063,12 +530609,6 @@ UBERON:0010056 future tongue - - - - - EHDAA2 - @@ -531083,7 +530623,7 @@ - + EHDAA2:0000799 EMAPA:17352 SCTID:361420009 @@ -531091,7 +530631,7 @@ UBERON:0010057 hypopharyngeal eminence - + @@ -531104,7 +530644,7 @@ - + EHDAA2 @@ -531121,12 +530661,12 @@ - + EHDAA2:0004610 UBERON:0010059 hypoglossal cord - + @@ -531139,7 +530679,7 @@ - + EHDAA2 @@ -531310,8 +530850,8 @@ - - + + EHDAA2:0004117 EMAPA:32801 FMA:285217 @@ -531321,11 +530861,11 @@ UBERON:0010062 pharyngotympanic tube epithelium - + - + @@ -531338,13 +530878,13 @@ - + cjm - + EHDAA2 @@ -531374,12 +530914,12 @@ - + EHDAA2:0004116 UBERON:0010063 tympanic cavity epithelium - + @@ -531392,7 +530932,7 @@ - + EHDAA2 @@ -531419,21 +530959,21 @@ - + An anatomical space with at least one opening to another space or the exterior. AEO:0000221 EHDAA2:0004616 UBERON:0010064 open anatomical space - + - + cjm @@ -531450,12 +530990,12 @@ - + EHDAA2:0004114 UBERON:0010065 auditory meatus epithelium - + @@ -531468,7 +531008,7 @@ - + EHDAA2 PMID:16313389 @@ -531741,7 +531281,7 @@ - + @@ -531757,14 +531297,14 @@ UBERON:0010074 chromaffin system - + - + cjm @@ -531895,7 +531435,7 @@ - + Consider merging with capillary layer. Consider choriocapillaris complex A plexus of capillaries that is located anteromedial to the eye. It is a capillary layer in the choroid. It is in contact with the basal surface of the retinal pigmented epithelium and supplies the photoreceptors with oxygen and nutrients. The fused basement membrane of this capillary layer and the pigmented epithelium is called Bruchs's membrane.[XAO:0004176]. Is an ocular vasculature that develops adjacent to the pigment epithelium of the eye. The optic choroid vascular plexus develops from the primitive mesencephalic artery. Initially blood enters from the mesencephalic central artery, and the dorsal ciliary vein. The plexus drains via the ophthalmic vein. The plexus supplies blood to the retina[ZFA:0005094]. @@ -531913,7 +531453,7 @@ UBERON:0010078 optic choroid vascular plexus - + @@ -531932,7 +531472,7 @@ - + ZFA @@ -532062,9 +531602,9 @@ - - - + + + @@ -532077,34 +531617,34 @@ UBERON:0010083 future dermis - + - + - + - + EHDAA2 - + EHDAA2 - + XAO @@ -532131,9 +531671,9 @@ - - - + + + @@ -532145,34 +531685,34 @@ UBERON:0010084 future diaphragm - + - + - + - + EHDAA2 - + PMID:23586979 - + PMID:23586979 @@ -532574,7 +532114,7 @@ - + @@ -532593,14 +532133,14 @@ UBERON:0010128 future pterygopalatine ganglion - + - + EHDAA2 @@ -532680,7 +532220,7 @@ - + @@ -532700,14 +532240,14 @@ UBERON:0010129 femur cartilage element - + - + EMAPA @@ -532806,8 +532346,8 @@ - - + + A small blood vessel in the abdomen that supplies blood directly to the pylorus (distal part of the stomach) and proximal part of the duodenum, and indirectly to the pancreatic head (via the anterior and posterior superior pancreaticoduodenal arteries). EHDAA2:0000310 @@ -532822,24 +532362,24 @@ gastroduodenal artery http://upload.wikimedia.org/wikipedia/commons/6/65/Gray532.png - + - + - + EHDAA2 - + FMA @@ -532926,12 +532466,6 @@ secretory circumventricular organ - - - - - MA - @@ -533080,7 +532614,7 @@ - + @@ -533089,7 +532623,7 @@ - + A sex cord that is part of a indifferent gonad. note that this represents the indifferent structure. EHDAA2:0004051 @@ -533098,7 +532632,7 @@ UBERON:0010141 primitive sex cord of indifferent gonad - + @@ -533107,20 +532641,20 @@ - + - + EHDAA2 - + EHDAA2 @@ -533242,8 +532776,8 @@ - - + + The numerous mucous-secreting glands found in several female mammalian species (including rodents and humans) on the anterior wall of the vagina, around the lower end of the urethra, and possessing a common paraurethral duct which opens (on each side) near the external urethral orifice; they are homologous with the prostate gland in males, have highly variable anatomy, and are believed to be the source of the female ejaculate, a lubricating fluid with a similar consistency to male prostatic fluid that is expelled through the urethra during sexual stimulation; like the male prostate, these glands are susceptible to infection (skenitis), cyst development, and cancer. in MP female urethral gland, Skene gland and paraurethral gland are exact syns. Note that NCITA seems to use the term in a more generic way, as a parent for skene gland, cowper gland (which may be the same as the male bulbo-urethral gland) female urethral gland @@ -533272,24 +532806,24 @@ paraurethral gland https://upload.wikimedia.org/wikipedia/commons/b/b8/Skenes_gland.jpg - + - + - + FMA - + PMID:10668204 @@ -533428,7 +532962,7 @@ - + The Skene's ducts are a pair of ducts leading from the Skene's glands to the surface of the vulva, to the left and right of the urethral opening. FMA has two classes that may be equivalent here UBERON:0035064 @@ -533447,14 +532981,14 @@ paraurethral duct https://upload.wikimedia.org/wikipedia/commons/b/b8/Skenes_gland.jpg - + - + PMID:10668204 @@ -533807,7 +533341,7 @@ - + The inner mucosa of the fourth stomach chamber of a ruminant produces rennet. BTO:0001168 Wikipedia:Rennet @@ -533817,14 +533351,14 @@ UBERON:0010154 inner lining mucosa of the abomasum - + - + BTO @@ -534750,7 +534284,7 @@ - + @@ -534773,14 +534307,14 @@ bulb of aorta - + - + FMA @@ -534845,7 +534379,7 @@ - + @@ -534859,14 +534393,14 @@ sinotubular junction - + - + MP @@ -535416,7 +534950,7 @@ - + @@ -535432,7 +534966,7 @@ pair of dorsal aortae - + @@ -535445,7 +534979,7 @@ - + EHDAA2 @@ -535468,19 +535002,19 @@ - + EHDAA2:0004512 UBERON:0010191 aortic system - + - + Wikipedia @@ -535528,7 +535062,7 @@ - + A portal vein that empties into capillaries within the kidneys. function not well understood. TAO:0000577 @@ -535537,7 +535071,7 @@ UBERON:0010193 renal portal vein - + @@ -535550,7 +535084,7 @@ - + ZFA @@ -535678,7 +535212,7 @@ - + The initial part of the entire common carotid artery ending with the point where the artery bifurcates into an external carotid artery and an internal carotid artery. EHDAA2:0000306 FMA:69323 @@ -535687,14 +535221,14 @@ UBERON:0010197 trunk of common carotid artery - + - + FMA @@ -535804,7 +535338,7 @@ - + @@ -535821,7 +535355,7 @@ UBERON:0010202 lateral line - + @@ -535834,7 +535368,7 @@ - + ZFA @@ -536067,8 +535601,8 @@ - - + + The plica semilunaris is a small fold of bulbar conjunctiva on the medial canthus of the eye. It is loose, so that eye movements are not restricted. It is the vestigial remnant of the nictitating membrane FMA:59045 @@ -536082,11 +535616,11 @@ plica semilunaris of conjunctiva http://upload.wikimedia.org/wikipedia/commons/1/1e/Gray1205.png - + - + @@ -536099,13 +535633,13 @@ - + FMA - + Wikipedia @@ -536181,7 +535715,7 @@ - + @@ -536200,14 +535734,14 @@ UBERON:0010210 blood clot - + - + BTO @@ -536285,7 +535819,7 @@ - + @@ -536306,14 +535840,14 @@ UBERON:0010212 laryngeal apparatus - + - + EHDAA2 @@ -536335,29 +535869,29 @@ - - + + UBERON:0010213 laryngeal pre-cartilage condensation - + - + - + EHDAA2-abstracted - + EHDAA2-abstracted @@ -536378,19 +535912,19 @@ - - + + Paired primordial elevations, on either side of the embryonic larynx, within which the arytenoid cartilages are formed. EHDAA2 and EMAPA appear to be inconsistent EHDAA2:0000146 UBERON:0010215 arytenoid swellings - + - + @@ -536403,13 +535937,13 @@ - + EHDAA2 - + EHDAA2 @@ -536442,7 +535976,7 @@ - + EHDAA2:0000144 EMAPA:17387 VHOG:0000998 @@ -536450,14 +535984,14 @@ UBERON:0010220 arytenoid pre-cartilage condensation - + - + EHDAA2 @@ -536473,34 +536007,34 @@ - + - - - + + + EHDAA2:0004085 UBERON:0010221 Many sources say: thyroid cartilage from arch 4 other laryngeal cartilage (cricoid/arytenoid) from 6? laryngeal associated mesenchyme - + - + - + - + @@ -536513,25 +536047,25 @@ - + EHDAA2 - + Wikipedia - + Wikipedia - + Wikipedia @@ -536707,7 +536241,7 @@ - + @@ -536724,14 +536258,14 @@ UBERON:0010227 future cardiac atrium - + - + ZFA @@ -536871,7 +536405,7 @@ - + @@ -536895,14 +536429,14 @@ eyeball of camera-type eye - + - + FMA @@ -537049,11 +536583,11 @@ - - - - - + + + + + The palatopharyngeus or palatopharyngeal or pharyngopalatinus muscle is a long, fleshy fasciculus, narrower in the middle than at either end, forming, with the mucous membrane covering its surface, the palatopharyngeal arch. Palatopharyngeus is a muscle that attaches to the palatine bones, soft palate, and pharynx and is innervated by Cranial Nerve X via the pharyngeal plexus.[FEED] @@ -537071,23 +536605,23 @@ palatopharyngeus muscle http://upload.wikimedia.org/wikipedia/commons/1/1b/Musculuspalatopharyngeus.png - + - + - + - + - + @@ -537106,34 +536640,34 @@ - + FMA-abduced-lr - + vagus nerve and cranial accessory nerve dbpedia - + vagus nerve and cranial accessory nerve dbpedia - + palatine aponeurosis and hard palate dbpedia - + Upper border of thyroid cartilage dbpedia @@ -537194,8 +536728,8 @@ - - + + @@ -537223,11 +536757,11 @@ uvular muscle http://upload.wikimedia.org/wikipedia/commons/b/b7/Gray169.png - + - + @@ -537240,13 +536774,13 @@ - + dbpedia - + dbpedia @@ -537350,7 +536884,7 @@ - + A variant of the ascending colon in ruminants and pigs. Consider merging with ascending colon @@ -537362,14 +536896,14 @@ UBERON:0010239 spiral colon - + - + Wikipedia @@ -537681,7 +537215,7 @@ - + A choroid tapetum lucidum that is made of a palisade of cells containing stacks of flat hexagonal crystals of guanine. @@ -537692,14 +537226,14 @@ UBERON:0010246 choroidal guanine tapetum - + - + doi:10.1017/S0025315400024760 @@ -537915,7 +537449,7 @@ - + The middle meningeal artery is typically the third branch of the first part (retromandibular part) of the maxillary artery; one of the two terminal branches of the external carotid artery. After branching off the maxillary artery in the infratemporal fossa, it runs through the foramen spinosum to supply the dura mater and the calvaria. The middle meningeal artery is the largest of the three (paired) arteries which supply the meninges, the others being the anterior meningeal artery and the posterior meningeal artery. In approximately half of subjects it branches into an accessory meningeal artery. The middle meningeal artery runs beneath the pterion. It is vulnerable to injury at this point, where the skull is thin. Rupture of the artery may give rise to an epidural hematoma. FMA:49711 @@ -537927,14 +537461,14 @@ middle meningeal artery http://upload.wikimedia.org/wikipedia/commons/1/1e/Middle_meningeal_artery.png - + - + FMA @@ -537957,7 +537491,7 @@ - + A meningeal branch to the dura mater arising from the anterior ethmoidal artery. this needs checking as part of a general revision of the blood vessels and their branches - unclear if the anterior meningeal artery should be treated separately from the anterior ethmoidal artery (ie as a branch) or the same thing @@ -537979,14 +537513,14 @@ anterior meningeal artery http://upload.wikimedia.org/wikipedia/commons/c/ce/Gray514.png - + - + Wikipedia @@ -538063,7 +537597,10 @@ - + + + + @@ -538073,8 +537610,13 @@ - - + + + + + + + @@ -538086,11 +537628,7 @@ UBERON:0010252 1st arch mandibular mesenchyme from neural crest - - - - - + @@ -538103,13 +537641,7 @@ - - EHDAA2 - - - - - + EHDAA2 @@ -538128,7 +537660,10 @@ - + + + + @@ -538138,31 +537673,26 @@ - - + + + + + + + Mesenchyme that develops_from a neural crest and is part of a 1st arch maxillary mesenchyme. EHDAA2:0000044 UBERON:0010253 1st arch maxillary mesenchyme from neural crest - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -538181,7 +537711,10 @@ - + + + + @@ -538192,8 +537725,13 @@ - - + + + + + + + @@ -538209,24 +537747,14 @@ UBERON:0010254 2nd arch mesenchyme from neural crest - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -538245,7 +537773,10 @@ - + + + + @@ -538256,7 +537787,12 @@ - + + + + + + Mesenchyme that develops_from a neural crest and is part of a 3rd arch mesenchyme. In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG] EHDAA2:0000083 @@ -538270,16 +537806,6 @@ UBERON:0010255 3rd arch mesenchyme from neural crest - - - - - - - - - EHDAA2 - @@ -538318,7 +537844,10 @@ - + + + + @@ -538329,8 +537858,13 @@ - - + + + + + + + Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme. In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG] EHDAA2:0000098 @@ -538344,24 +537878,14 @@ UBERON:0010256 4th arch mesenchyme from neural crest - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -538402,7 +537926,10 @@ - + + + + @@ -538413,8 +537940,13 @@ - - + + + + + + + Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme. EHDAA2:0004077 neural crest derived arch 6 mesenchyme @@ -538423,24 +537955,14 @@ UBERON:0010257 6th arch mesenchyme from neural crest - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -538468,7 +537990,7 @@ - + @@ -538480,14 +538002,14 @@ UBERON:0010258 mesenchyme from rhombencephalic neural crest - + - + EHDAA2 @@ -538670,7 +538192,7 @@ - + @@ -538686,7 +538208,7 @@ UBERON:0010264 hepatopancreas - + @@ -538699,7 +538221,7 @@ - + BTO @@ -538740,7 +538262,7 @@ - + @@ -538754,14 +538276,14 @@ UBERON:0010266 arthropod hepatopancreas - + - + PMID:18025161 @@ -538817,21 +538339,21 @@ - + FMA:256524 SCTID:315673007 internal part of filum terminale UBERON:0010269 filum terminale internum - + - + FMA @@ -538847,21 +538369,21 @@ - + FMA:256526 SCTID:315573001 external part of filum terminale UBERON:0010270 filum terminale externum - + - + FMA @@ -538926,7 +538448,7 @@ - + A group of bones comprised of hyoid body and two pairs of cornua (i.e. greater cornua and lesser cornua), and lies just below the tongue, above the thyroid cartilage. Apparatus located in the floor of the mouth, under the mandibular arcade. The apparatus consists of a central corpus and four pairs of processes. This apparatus serves as the site of insertion for a variety of muscles associated with movements of the tongue and as the origin of the m. hyoglossus.[AAO] relationship loss: part_of hyolaryngeal complex (AAO:0000226)[AAO] @@ -538944,14 +538466,14 @@ UBERON:0010272 hyoid apparatus - + - + AAO @@ -539106,7 +538628,7 @@ - + @@ -539122,14 +538644,14 @@ mesocardium - + - + EHDAA2 @@ -539151,8 +538673,8 @@ - - + + There are two Pericardial sinuses: transverse and oblique. The cul-de-sac enclosed between the limbs of the inverted U of the venous mesocardium lies behind the left atrium and is known as the oblique sinus. The passage between the venous and arterial mesocardiabi.e. , between the aorta and pulmonary artery in front and the superior vena cava behindbis termed the transverse sinus. Also, the sinus that forms in the pericardial cavity where the dorso-mesentary pericardium reside. Can be used to pass ligature during cardiac surgery. SCTID:314273005 Wikipedia:Pericardial_sinus @@ -539166,24 +538688,24 @@ pericardial sinus http://upload.wikimedia.org/wikipedia/commons/7/7e/Gray489.png - + - + - + FMA-abduced - + MA-abduced @@ -539319,8 +538841,8 @@ - - + + Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. DHBA:12322 EFO:0003567 @@ -539333,11 +538855,11 @@ midbrain basal plate - + - + @@ -539350,13 +538872,13 @@ - + EHDAA2 - + ZFA @@ -539384,7 +538906,7 @@ - + Portion of neural tube that gives rise to the midbrain. we follow ZFA in temporally dividing midbrain NT from presumptive midbrain, but in future this may be collapsed TAO:0007039 @@ -539392,14 +538914,14 @@ UBERON:0010286 midbrain neural tube - + - + ZFA @@ -539415,7 +538937,7 @@ - + DHBA:12863 FMA:53419 SCTID:280191009 @@ -539425,7 +538947,7 @@ UBERON:0010287 motor root of facial nerve - + @@ -539438,7 +538960,7 @@ - + Wikipedia @@ -539472,7 +538994,7 @@ - + Circular cartilage ringing the posterior portion of the eye in the sclera. Supports the eye. consider distinguishing cup from predecessor of ossicle. Hall: The scleral cartilaginous cup is a distinctly sepa- rate element composed of hyaline cartilage relationship to sclera - overlaps? @@ -539488,7 +539010,7 @@ UBERON:0010289 scleral cartilage - + @@ -539501,7 +539023,7 @@ - + cjm @@ -539558,7 +539080,7 @@ - + A bony plate around the eyes, are situated at the corneal-scleral limbus. They do not articulate with other elements of the skull. Typically, the scleral ossicles overlap the rim of a cup of scleral cartilage that supports the eyeball. Situated near the equator of the eye and may slightly overlap the rim of scleral cartilage. @@ -539571,14 +539093,14 @@ UBERON:0010290 scleral ossicle - + - + ZFA @@ -539618,19 +539140,19 @@ - + Wikipedia:Sclera#Histology UBERON:0010291 layer of sclera - + - + cjm @@ -539930,8 +539452,8 @@ - - + + A pair of small dish-shaped bones that cap the anterior and posterior margin of the eyeball.[TAO] The scleral ossicles [of teleosts] are reported to form indirectly by endochondral (Hall and Miyake, 1992) or by perichondral ossification (Patterson, 1977) from a cartilage element that is also present in the sclera. This is unlike the scleral ossicles of reptiles, which develop directly from ectomesenchyme (i.e., intramembranous ossification) and independently from the scleral cartilage @@ -539941,11 +539463,11 @@ UBERON:0010297 endochondral scleral ossicle - + - + @@ -539958,13 +539480,13 @@ - + ZFA - + ZFA @@ -540004,14 +539526,14 @@ - + The scleral ossicles [in reptiles] UBERON:0010298 are of dermal (neural crest) origin, develop intramembranously within the scleral mesenchyme, and are induced to form by overlying (transient) epithelial scleral papillae (Nelson, 1942; Murray, 1943; Fyfe and Hall, 1981, 1983; Hall, 1981, 2005; Pinto and Hall, 1991) intramembranous scleral ossicle - + @@ -540024,7 +539546,7 @@ - + PMID:16496288 @@ -540095,7 +539617,7 @@ - + A single extraembryonic epithelium, which closes the germband dorsally. May be obsoleted once added to insect ontology. Coordinate with cell type in CL BTO:0004800 @@ -540106,7 +539628,7 @@ amnioserosa - + @@ -540119,7 +539641,7 @@ - + Cyclorrhapha DOI:10.1073/pnas.0709145105 @@ -540250,12 +539772,6 @@ - - - - - - @@ -540589,7 +540105,7 @@ - + Developing anatomical structure that develops into the eyeball and associated structures. Multi-tissue structure that consists of the structures that develop into the retina and lens.[TAO] TAO:0002201 @@ -540598,14 +540114,14 @@ UBERON:0010312 immature eye - + - + definitional @@ -540897,20 +540413,20 @@ - + Permanent cartilage structure projecting from the site of origin of the recti muscles. Supports eyeball and aids rotation. eye stalk UBERON:0010326 optic pedicel - + - + PMID:16496288 @@ -540988,19 +540504,19 @@ - + Mesenchyme that is part of a limb/fin bud. UBERON:0010329 paired limb/fin bud mesenchyme - + - + EHDAA2-abduced @@ -541069,7 +540585,7 @@ - + An epithelium that is part of a handplate. EHDAA2:0000730 EMAPA:32630 @@ -541077,7 +540593,7 @@ UBERON:0010332 epithelium of handplate - + @@ -541090,7 +540606,7 @@ - + EHDAA2 @@ -541131,19 +540647,19 @@ - + Mesenchyme that is part of a extraembryonic membrane. UBERON:0010333 extraembryonic membrane mesenchyme - + - + EHDAA2-abduced @@ -541162,7 +540678,10 @@ - + + + + @@ -541172,31 +540691,26 @@ - - + + + + + + + Mesenchyme that develops_from a neural crest and is part of a maxillary process mesenchyme. EHDAA2:0004601 UBERON:0010334 maxillary process mesenchyme from neural crest - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -541215,7 +540729,10 @@ - + + + + @@ -541225,31 +540742,26 @@ - - + + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a maxillary process mesenchyme. EHDAA2:0004602 UBERON:0010335 maxillary process mesenchyme from head mesenchyme - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -541268,7 +540780,10 @@ - + + + + @@ -541278,31 +540793,26 @@ - - + + + + + + + Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme. EHDAA2:0004603 UBERON:0010336 mandibular process mesenchyme from neural crest - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -541321,7 +540831,10 @@ - + + + + @@ -541331,31 +540844,26 @@ - - + + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme. EHDAA2:0004604 UBERON:0010337 mandibular process mesenchyme from head mesenchyme - - - - - + - - EHDAA2 - - - - - + EHDAA2 @@ -541374,7 +540882,10 @@ - + + + + @@ -541384,22 +540895,17 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch maxillary mesenchyme. EHDAA2:0000043 UBERON:0010338 1st arch maxillary mesenchyme from head mesenchyme - - - - - - - - - EHDAA2 - @@ -541416,7 +540922,10 @@ - + + + + @@ -541426,22 +540935,17 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme. EHDAA2:0000036 UBERON:0010339 1st arch mandibular mesenchyme from head mesenchyme - - - - - - - - - EHDAA2 - @@ -541458,7 +540962,10 @@ - + + + + @@ -541468,23 +540975,18 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme. EMAPA:16130 mesenchyme derived from head mesoderm of mesenchyme of 1st arch UBERON:0010341 1st arch mesenchyme from head mesenchyme - - - - - - - - - EMAPA - @@ -541507,7 +541009,10 @@ - + + + + @@ -541517,7 +541022,12 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 2nd arch mesenchyme. EHDAA2:0000067 EMAPA:16280 @@ -541528,16 +541038,6 @@ UBERON:0010343 2nd arch mesenchyme from head mesenchyme - - - - - - - - - EHDAA2 - @@ -541560,7 +541060,10 @@ - + + + + @@ -541570,7 +541073,12 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 3rd arch mesenchyme. EHDAA2:0000082 EMAPA:16403 @@ -541581,16 +541089,6 @@ UBERON:0010344 3rd arch mesenchyme from head mesenchyme - - - - - - - - - EHDAA2 - @@ -541613,7 +541111,10 @@ - + + + + @@ -541623,7 +541124,12 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme. EHDAA2:0000097 EMAPA:16771 @@ -541634,16 +541140,6 @@ UBERON:0010345 4th arch mesenchyme from head mesenchyme - - - - - - - - - EHDAA2 - @@ -541666,7 +541162,10 @@ - + + + + @@ -541676,7 +541175,12 @@ - + + + + + + Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme. EHDAA2:0004078 head mesenchyme derived arch 6 mesenchyme @@ -541685,16 +541189,6 @@ UBERON:0010347 6th arch mesenchyme from head mesenchyme - - - - - - - - - EHDAA2 - @@ -541709,13 +541203,13 @@ - + EHDAA2:0000795 hyoid muscle plate UBERON:0010348 hyoid pre-muscle mass - + @@ -541728,7 +541222,7 @@ - + EHDAA2 @@ -541786,21 +541280,21 @@ - + EMAPA:17351 future Reichert's cartilage hyoid cartilage pre-cartilage condensation UBERON:0010354 Reichert's cartilage pre-cartilage condensation - + - + DOI:10.1111/j.1469-7580.2005.00441.x EHDAA2 @@ -541977,7 +541471,7 @@ - + An arch-shaped structure of the vertebra that extends dorsally (neural arch) or ventrally (hemal arch) from the vertebral centrum. (...) certain common components [of vertebral structure] are found in nearly all vertebrate. A representative vertebra has a vertebral arch or neural arch, which extends dorsally around the spinal cord.[well established][VHOG] Note that humans do not have hemal arches, so VA=NA for FMA @@ -541990,14 +541484,14 @@ arch of centrum of vertebra - + - + FMA @@ -542611,7 +542105,7 @@ - + A unit of lung supplied by three to five terminal bronchioles and contained by fibrous septa. a pyramidal mass of lung tissue with sides that are bounded by the incomplete interlobular connective tissue septa and with a base, which is 1-2 cm in diameter, which usually faces the pleural surface of the lung; lobules that occupy a more central position in the lung are not well defined and are considered to consist of three to five pulmonary acini with proximate terminal bronchioles. @@ -542623,7 +542117,7 @@ secondary pulmonary lobule - + @@ -542636,7 +542130,7 @@ - + FMA @@ -542815,8 +542309,8 @@ - - + + In the head of the pancreas, the angle of junction of the lower and left lateral borders forms a prolongation, termed the uncinate process. During the embryonic development of the distal foregut, the duodenum c-shape is formed while rotating the ventral pancreatic bud into the dorsal bud. The dorsal and ventral pancreatic buds fuse. The dorsal pancreatic bud becomes the body, tail, and isthmus of the pancreas and the ventral pancreatic bud forms the pancreatic head and uncinate process[WP]. processus uncinatus @@ -542838,11 +542332,11 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-female/v1.3/assets/3d-vh-f-pancreas.glb https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.3/assets/3d-vh-m-pancreas.glb - + - + @@ -542855,13 +542349,13 @@ - + FMA - + Wikipedia @@ -542932,7 +542426,7 @@ - + @@ -542946,14 +542440,14 @@ UBERON:0010375 pancreas dorsal primordium - + - + EHDAA2 @@ -542982,7 +542476,7 @@ - + @@ -542996,14 +542490,14 @@ UBERON:0010376 pancreas ventral primordium - + - + EHDAA2 @@ -543036,7 +542530,7 @@ - + @@ -543049,7 +542543,7 @@ UBERON:0010377 mesenchyme from somatopleure - + @@ -543062,7 +542556,7 @@ - + EHDAA2 @@ -543094,7 +542588,7 @@ - + @@ -543106,7 +542600,7 @@ UBERON:0010378 mesenchyme from splanchnopleure - + @@ -543119,7 +542613,7 @@ - + EHDAA2 @@ -543152,9 +542646,9 @@ - - - + + + The superior tarsal muscle is a smooth muscle adjoining the levator palpebrae superioris muscle that helps to raise the upper eyelid. declaring this to be both smooth muscle and part of the LPS leads to a disjointness violation (smooth muscle and striated muscle) @@ -543172,34 +542666,34 @@ superior tarsal muscle http://upload.wikimedia.org/wikipedia/commons/6/6f/Gray894.png - + - + - + - + dbpedia - + FMA - + underside of levator palpebrae superioris dbpedia @@ -543443,7 +542937,7 @@ - + @@ -543463,14 +542957,14 @@ The proximal rib derives from the caudal half of somite[PMID:15906248] proximal segment of rib - + - + MA @@ -543507,7 +543001,7 @@ - + @@ -543536,7 +543030,7 @@ Sources vary as to whether the pterygoid corresponds to the pterygoid processes in general, or the latter/inner plate. pterygoid bone - + @@ -543549,7 +543043,7 @@ - + MA @@ -543988,7 +543482,7 @@ - + @@ -544008,14 +543502,14 @@ spleen trabecular artery - + - + MP @@ -544132,7 +543626,7 @@ - + @@ -544151,14 +543645,14 @@ spleen central arteriole - + - + Wikipedia:Trabecular_arteries @@ -544291,8 +543785,8 @@ - - + + @@ -544307,11 +543801,11 @@ lateral ventricle subependymal layer - + - + @@ -544324,13 +543818,13 @@ - + MA - + Wikipedia @@ -544720,7 +544214,7 @@ - + @@ -544761,7 +544255,7 @@ barrel cortex - + @@ -544774,7 +544268,7 @@ - + MBA @@ -544863,7 +544357,7 @@ - + A part of the lymph node cortex in which B lymphocytes home to primary follicles to survey follicular dendritic cells (FDCs); antigen stimulated B cells proliferate and differentiate within the follicles forming distinctive germinal centers. MA:0002851 lymph node B cell dependent cortex @@ -544873,14 +544367,14 @@ lymph node B cell domain - + - + MP @@ -544925,7 +544419,7 @@ - + The paracortex and interfollicular cortex of the lymph node in which T lymphocytes home to survey dendritic cells. EMAPA:37663 MA:0002852 @@ -544942,14 +544436,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb - + - + MP @@ -545111,7 +544605,7 @@ - + @@ -545138,14 +544632,14 @@ lymph node germinal center mantle zone - + - + MA @@ -545212,7 +544706,7 @@ - + @@ -545245,14 +544739,14 @@ spleen B cell corona - + - + CL:tm @@ -545333,7 +544827,7 @@ - + A lymphoid follicle containing naive B cells. The cortex of lymph nodes, the white pulp of spleen, and mucosa associated lymphoid tissue all have these primary follicles FMA:55223 @@ -545343,7 +544837,7 @@ UBERON:0010422 primary nodular lymphoid tissue - + @@ -545356,7 +544850,7 @@ - + CL:tm @@ -545403,12 +544897,6 @@ primary lymphoid nodule of tonsil - - - - - FMA - @@ -545428,7 +544916,7 @@ - + EMAPA:37492 MA:0001397 MA:0001418 @@ -545441,14 +544929,14 @@ The distal rib derives from both somite halves[PMID:15906248] distal segment of rib - + - + MA @@ -545759,7 +545247,7 @@ - + One of: zygomaticus major, zygomaticus minor. EMAPA:37703 MA:0002404 @@ -545773,7 +545261,7 @@ origin: posterior braincase zygomaticus muscle - + @@ -545786,7 +545274,7 @@ - + Wikipedia @@ -545843,10 +545331,10 @@ - - - - + + + + A narrow, elongated muscle of the rotator cuff. EMAPA:36156 @@ -545864,45 +545352,45 @@ teres minor muscle http://upload.wikimedia.org/wikipedia/commons/c/c4/Gray810.png - + - + - + - + - + Wikipedia - + dbpedia - + lateral border of the scapula dbpedia - + inferior facet of greater tubercle of the humerus dbpedia @@ -546205,14 +545693,14 @@ - + The intracranial dura mater, consisting of two layers: the outer periosteal layer which normally always adheres to the periosteum of the bones of the cranial vault; and the inner meningeal layer which in most places is fused with the outer. The two layers separate to accommodate meningeal vessels and large venous (dural) sinuses. The meningeal layer is also involved in the formation of the various dural folds, such as the falx cerebri and tentorium cerebelli and is comparable to and continuous with the dural mater of the spinal cord. The cranial epidural space is then a potential space between the bone and the combined periosteum/periosteal layer of the dura mater realised only pathologically and is neither continuous with or comparable to the vertebral epidural space. not clear whether this should be classified as part of cranial dura mater, as the division only makes sense in this area FMA:231545 UBERON:0010507 layer of dura mater - + @@ -546225,7 +545713,7 @@ - + FMA @@ -546653,28 +546141,26 @@ - + + + + - + + + + + + An electric organ that is part of a tail. BTO:0000376 electric organ of tail UBERON:0010519 tail electric organ - - - - - - - - - BTO - @@ -546728,16 +546214,16 @@ - + - + - + An organ that is capable of detecting electrical stimulus. @@ -546759,7 +546245,7 @@ - + Skeletal element that forms as a replacement or substitution of another element or tissue. VSAO:0000135 XAO:0004016 @@ -546767,7 +546253,7 @@ UBERON:0010522 replacement element - + @@ -546780,7 +546266,7 @@ - + cjm @@ -546799,7 +546285,7 @@ - + A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. MESH:D055806 TAO:0005251 @@ -546808,14 +546294,14 @@ UBERON:0010523 microcirculatory vessel - + - + ZFA @@ -547091,7 +546577,7 @@ - + @@ -547113,14 +546599,14 @@ UBERON:0010531 metanephros induced blastemal cells - + - + EHDAA2 @@ -547168,7 +546654,7 @@ - + @@ -547184,7 +546670,7 @@ UBERON:0010532 primitive nephron - + @@ -547197,7 +546683,7 @@ - + EHDAA2 @@ -547222,13 +546708,21 @@ - + + + + - + + + + + + @@ -547240,16 +546734,6 @@ UBERON:0010533 metanephros cortex - - - - - - - - - VHOG - @@ -547315,7 +546799,7 @@ - + A primitive nephron that is part of a metanephros. primitive nephron EHDAA2:0001516 @@ -547324,14 +546808,14 @@ UBERON:0010535 primitive metanephric nephron - + - + EHDAA2 @@ -547353,7 +546837,7 @@ - + @@ -547363,7 +546847,7 @@ UBERON:0010536 nephron progenitor - + @@ -547376,7 +546860,7 @@ - + cjm @@ -547522,8 +547006,8 @@ - - + + @@ -547535,24 +547019,24 @@ UBERON:0010541 tarsus cartilage element - + - + - + EHDAA2 - + EHDAA2 @@ -547579,7 +547063,7 @@ - + @@ -547614,14 +547098,14 @@ UBERON:0010543 acropodial skeleton - + - + PHENOSCAPE:ni @@ -547664,7 +547148,7 @@ - + @@ -547705,14 +547189,14 @@ metacarpus skeleton https://upload.wikimedia.org/wikipedia/commons/2/2f/Metacarpals_numbered-en.svg - + - + many to one @@ -547829,7 +547313,7 @@ - + @@ -547866,14 +547350,14 @@ metatarsus skeleton http://upload.wikimedia.org/wikipedia/commons/5/52/Gray291.png - + - + many to one @@ -547963,7 +547447,7 @@ - + @@ -547996,14 +547480,14 @@ UBERON:0010546 metapodial skeleton - + - + PHENOSCAPE:ni @@ -550903,7 +550387,7 @@ - + @@ -550930,14 +550414,14 @@ UBERON:0010688 skeleton of manual acropodium - + - + PHENOSCAPE:ni @@ -551154,7 +550638,7 @@ - + @@ -551179,14 +550663,14 @@ UBERON:0010696 skeleton of pedal acropodium - + - + PHENOSCAPE:ni @@ -551403,19 +550887,19 @@ - + EMAPA:32720 UBERON:0010700 phalanx pre-cartilage condensation - + - + EMAPA @@ -552184,7 +551668,7 @@ - + @@ -552197,14 +551681,14 @@ UBERON:0010712 limb skeleton subdivision - + - + VSAO @@ -552292,7 +551776,7 @@ - + An iliac endochondral element that is composed primarily of cartilage tissue. EHDAA2:0000808 EMAPA:18347 @@ -552301,7 +551785,7 @@ UBERON:0010714 iliac cartilage element - + @@ -552314,7 +551798,7 @@ - + EHDAA2 @@ -552349,7 +551833,7 @@ - + A pubic endochondral element that is composed primarily of cartilage tissue. EHDAA2:0001573 EMAPA:26928 @@ -552357,7 +551841,7 @@ UBERON:0010718 pubic cartilage element - + @@ -552370,7 +551854,7 @@ - + EHDAA2 @@ -552878,8 +552362,8 @@ - - + + @@ -552891,11 +552375,11 @@ UBERON:0010728 sphenoid lesser wing pre-cartilage condensation - + - + @@ -552908,13 +552392,13 @@ - + EHDAA2 - + EHDAA2 @@ -552945,8 +552429,8 @@ - - + + @@ -552965,11 +552449,11 @@ UBERON:0010732 alisphenoid pre-cartilage condensation - + - + @@ -552982,13 +552466,13 @@ - + EHDAA2 - + EHDAA2 @@ -553027,8 +552511,8 @@ - - + + An alisphenoid endochondral element that is composed primarily of cartilage tissue. EHDAA2:0003450 sphenoid greater wing cartilage condensation @@ -553036,11 +552520,11 @@ UBERON:0010733 alisphenoid cartilage element - + - + @@ -553053,13 +552537,13 @@ - + EHDAA2 - + EHDAA2 @@ -553367,7 +552851,7 @@ - + @@ -553389,14 +552873,14 @@ bone of appendage girdle complex - + - + UBERONREF:0000003 @@ -553676,7 +553160,7 @@ - + A sacral vertebra endochondral element that is composed primarily of cartilage tissue. EHDAA2:0001773 EMAPA:18009 @@ -553685,14 +553169,14 @@ UBERON:0010745 sacral vertebra cartilage element - + - + EHDAA2 @@ -553856,7 +553340,7 @@ - + A lymphoid follicle that is part of a lymph node. EMAPA:35527 MA:0000742 @@ -553866,14 +553350,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.4/assets/3d-nih-f-lymph-node.glb https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.4/assets/3d-nih-m-lymph-node.glb - + - + issues/7 MP-def @@ -553890,8 +553374,8 @@ - - + + The middle pharyngeal constrictor is a fanshaped muscle, smaller than the Inferior pharyngeal constrictor muscle. The middle constrictor is a pharyngeal arches 4/6 muscle that participates in oral/pharyngeal behaviors and is innervated by the pharyngeal plexus of Vagus and attaches to the hyoid apparatus and the midline raphe.[FEED] FMA:46622 @@ -553915,11 +553399,11 @@ middle pharyngeal constrictor http://upload.wikimedia.org/wikipedia/commons/8/8f/Musculusconstrictorpharyngismedius.png - + - + @@ -553932,14 +553416,14 @@ - + pharyngeal plexus Wikipedia - + dbpedia @@ -554032,9 +553516,9 @@ - - - + + + @@ -554058,15 +553542,15 @@ prefrontal bone http://upload.wikimedia.org/wikipedia/commons/4/44/Dromaeosaurus_skull_en.svg - + - + - + @@ -554079,20 +553563,20 @@ - + orbital series ISBN:0073040584 - + ISBN:0073040584 - + Wikipedia @@ -554131,7 +553615,7 @@ - + @@ -554151,14 +553635,14 @@ UBERON:0010751 squamous part of temporal bone primordium - + - + EHDAA2 PMID:11523816 @@ -554849,8 +554333,8 @@ - - + + @@ -554863,24 +554347,24 @@ UBERON:0010846 radius pre-cartilage condensation - + - + - + EHDAA2 - + EHDAA2 @@ -554909,8 +554393,8 @@ - - + + @@ -554923,24 +554407,24 @@ UBERON:0010847 ulna pre-cartilage condensation - + - + - + EHDAA2 - + EHDAA2 @@ -554970,7 +554454,7 @@ - + @@ -554984,14 +554468,14 @@ UBERON:0010848 radius-ulna cartilage element - + - + EMAPA @@ -555031,7 +554515,7 @@ - + @@ -555043,14 +554527,14 @@ UBERON:0010849 tibia cartilage element - + - + EMAPA @@ -555079,7 +554563,7 @@ - + @@ -555091,14 +554575,14 @@ UBERON:0010850 tibia pre-cartilage condensation - + - + EHDAA2 @@ -555126,7 +554610,7 @@ - + @@ -555141,14 +554625,14 @@ UBERON:0010851 fibula cartilage element - + - + EMAPA @@ -555195,7 +554679,7 @@ - + @@ -555210,14 +554694,14 @@ UBERON:0010852 fibula pre-cartilage condensation - + - + EHDAA2 @@ -555233,7 +554717,7 @@ - + A smooth, rounded eminence on the lateral portion of the articular surface of the humerus. It articulates with the cupshaped depression on the head of the radius, and is limited to the front and lower part of the bone. TODO - check AAO. @@ -555252,14 +554736,14 @@ capitulum of humerus http://upload.wikimedia.org/wikipedia/commons/b/b9/Capitulumhumeri.PNG - + - + FMA @@ -556261,8 +555745,8 @@ - - + + A small pointed eminence of the external ear, situated in front of the concha, and projecting backward over the meatus. The tragus is generally believed to play a role in vertical sound localization in bats FMA:60998 @@ -556275,24 +555759,24 @@ tragus - + - + - + FMA - + Wikipedia-uncited @@ -556404,7 +555888,7 @@ - + Muscles of the pelvic girdle, hindlimb or pelvic fin. Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO] AAO:0000218 @@ -556421,14 +555905,14 @@ pelvic complex muscle - + - + prolog @@ -556496,7 +555980,7 @@ - + A muscle of a pectoral girdle, pectoral fin or anterior limb. the MA class belongs here, based on its current child classes Muscles of the pectoral girdle, arm, forearm, and hand (brachium, antebrachium, manus respectively).[AAO] @@ -556512,14 +555996,14 @@ UBERON:0010891 pectoral complex muscle - + - + prolog @@ -556571,8 +556055,8 @@ - - + + An endochondral element of the nasal capsule that forms septum between nasal capsules and usually remains unossified in mammals. @@ -556585,11 +556069,11 @@ UBERON:0010892 mesethmoid element - + - + @@ -556602,13 +556086,13 @@ - + ISBN:0073040584 - + TAO @@ -556821,14 +556305,14 @@ - + - + Dermal element that arises via intramembranous ossification and are developmentally distinct from true ribs that articulate with the vertebral column. @@ -556842,11 +556326,11 @@ UBERON:0010898 gastralium - + - + @@ -556859,13 +556343,13 @@ - + ISBN:0073040584 - + Wikipedia @@ -557154,9 +556638,9 @@ - - - + + + @@ -557170,34 +556654,34 @@ lateral part derives from a fish dermal bone while the medial part comes from a spur off the manubrium endochondral bone[JB] clavicle bone primordium - + - + - + - + EHDAA2 - + EHDAA2 - + mah shown in mouse PMC1352163 @@ -557215,20 +556699,20 @@ - + Third bone of the lower leg, normally restricted to the area of the knee, in multuberculates, monotremes and some therians. UBERON:0010907 parafibula - + - + Palaeos @@ -557280,7 +556764,7 @@ - + Posterior ossification of the otic capsule. teleost fishes have a bone which is called the opisthotic. However, it is not homologous to the tetrapod opisthotic and the teleost otic capsule is all of a piece AAO:0010835 @@ -557288,14 +556772,14 @@ see TAO:0000474 - intercalar "Small membrane bone homologous with a cartilage bone in more basal fishes (Patterson, 1977). Situated between the exoccipital and the pterotic at point of attachment of short ligament that originates on the ventral arm of the posttemporal." opisthotic - + - + AAO @@ -557347,8 +556831,8 @@ - - + + Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. Anatomical cluster consisting of the skeletal elements that are part of the skeleton.[VSAO] FMA:23879 @@ -557360,11 +556844,11 @@ subdivision of skeleton - + - + @@ -557377,13 +556861,13 @@ - + UBERONREF:0000003 - + VSAO @@ -557422,7 +556906,7 @@ - + Skeletal element that forms around the notochord and is part of the vertebral column. we include a distinct subclass for bony vertebra In contrast to lampreys and jawed vertebrates, hagfishes were thought to lack vertebrae. Now, long overlooked vertebral rudiments have been analysed in hagfish, suggesting that vertebrae existed in the last common ancestor of all vertebrates.[well established][VHOG] @@ -557438,7 +556922,7 @@ UBERON:0010913 vertebral element - + @@ -557452,7 +556936,7 @@ - + cjm @@ -557615,7 +557099,7 @@ - + Fibers of the thyroarytenoid muscle that continue to the margin of the epiglottis; it closes the inlet to the larynx. Thexton, see notes from WG2.[FEED] not a distinct muscle in FMA @@ -557637,7 +557121,7 @@ thyroepiglotticus muscle http://upload.wikimedia.org/wikipedia/commons/6/64/Musculusthyreoarytenoideus.png - + @@ -557650,7 +557134,7 @@ - + FMA @@ -557727,14 +557211,14 @@ - + - + @@ -557763,24 +557247,24 @@ muscle belly cricopharyngeus muscle - + - + - + FMA - + Wikipedia @@ -557850,12 +557334,12 @@ - + EHDAA2:0001909 UBERON:0010929 stapedius pre-muscle condensation - + @@ -557868,7 +557352,7 @@ - + EHDAA2 @@ -557965,9 +557449,9 @@ - - - + + + Cricoarytenoid muscles are muscles that connect the cricoid cartilage and arytenoid cartilage. More specifically, it can refer to: Posterior cricoarytenoid muscle Lateral cricoarytenoid muscle. candidate for obsoletion. See https://github.com/obophenotype/uberon/issues/530 EMAPA:37498 @@ -557987,15 +557471,15 @@ https://github.com/obophenotype/uberon/issues/530 http://upload.wikimedia.org/wikipedia/commons/9/96/Gray959.png - + - + - + @@ -558008,19 +557492,19 @@ - + dbpedia - + dbpedia - + dbpedia @@ -558111,9 +557595,9 @@ - - - + + + The orbicularis oris is a superficial facial muscle with fibers that encircle the opening of the oral cavity that attaches to the maxilla, mandible, skin and modiolus, and that participates in oral/pharyngeal behaviors, and is innervated by the facial nerve (CN VII). @@ -558134,36 +557618,36 @@ https://github.com/obophenotype/uberon/issues/473 https://upload.wikimedia.org/wikipedia/commons/b/b6/Orbicularis_oris.jpg - + - + - + - + Maxilla and mandible dbpedia - + Maxilla and mandible dbpedia - + Skin around the lips dbpedia @@ -558240,12 +557724,12 @@ - + EHDAA2:0002002 UBERON:0010935 tensor tympani pre-muscle condensation - + @@ -558258,7 +557742,7 @@ - + EHDAA2 @@ -558270,8 +557754,8 @@ - - + + FMA:46658 SCTID:244805001 musculus thyropharyngeus @@ -558285,24 +557769,24 @@ muscle belly thyropharyngeus muscle - + - + - + FMA - + dbpedia @@ -558354,12 +557838,12 @@ - - - - - - + + + + + + The salpingopharyngeus muscle arises from the inferior part of the cartilage of the pharyngotympanic tube (Eustachian tube) in the nasal cavity; it passes downward and blends with the posterior fasciculus of the palatopharyngeus muscle. The salpingopharyngeus is known to raise the pharynx and larynx during deglutition (swallowing) and laterally draws the pharyngeal walls up. In addition, it opens the pharyngeal orifice of the pharyngotympanic tube during swallowing. This allows for the equalization of pressure between the auditory canal and the pharynx. The salpingopharyngeus is innervated by the vagus nerve (CN X) via the pharyngeal plexus. Salpingopharyngeus is a muscle that attaches to pharyngotympanic tube and the pharynx and is innervated by pharyngeal plexus of CN X and participates in oral/pharyngeal behaviors.[FEED] @@ -558375,27 +557859,27 @@ salpingopharyngeus muscle http://upload.wikimedia.org/wikipedia/commons/e/e3/Salpingopharyngeus.png - + - + - + - + - + - + @@ -558408,41 +557892,41 @@ - + FMA-abduced-lr - + vagus nerve and cranial accessory nerve dbpedia - + vagus nerve and cranial accessory nerve dbpedia - + lower part of the cartilage of the auditory tube dbpedia - + fibers pass downward and blend with the palatopharyngeus muscle to the upper border thyroid cartilage blending with constrictor fibers dbpedia - + fibers pass downward and blend with the palatopharyngeus muscle to the upper border thyroid cartilage blending with constrictor fibers dbpedia @@ -558486,7 +557970,7 @@ - + belly venter FMA:9719 @@ -558495,14 +557979,14 @@ UBERON:0010938 muscle belly - + - + FMA @@ -558701,7 +558185,7 @@ - + @@ -558739,14 +558223,14 @@ anterior digastric muscle https://github.com/obophenotype/uberon/issues/538 - + - + mandibular division (V3) of the trigeminal (CN V) via the mylohyoid nerve Wikipedia @@ -558817,7 +558301,7 @@ - + @@ -558846,14 +558330,14 @@ posterior digastric muscle - + - + digastric branch FEED Wikipedia @@ -558941,8 +558425,8 @@ - - + + The occipitofrontalis or epicranius is a muscle which covers parts of the skull. It consists of two parts or bellies: The occipital belly, near the occipital bone, and the frontal belly, near the frontal bone. A zone of muscle in FMA @@ -558960,24 +558444,24 @@ occipitofrontalis muscle http://upload.wikimedia.org/wikipedia/commons/f/fa/Gray378.png - + - + - + dbpedia - + dbpedia @@ -559024,7 +558508,7 @@ - + A belly of the occipitofrontalis muscle that is near the occipital bone. FMA:46758 SCTID:21405000 @@ -559037,14 +558521,14 @@ UBERON:0010947 occipitalis - + - + FMA @@ -559265,7 +558749,7 @@ - + A belly of the occipitofrontalis muscle that is near the frontal bone. FMA:46757 SCTID:368680005 @@ -559284,14 +558768,14 @@ frontalis muscle belly https://upload.wikimedia.org/wikipedia/commons/b/be/Musculus_frontalis.png - + - + FMA @@ -559364,9 +558848,9 @@ - - - + + + The nasalis (compressor naris) is a sphincter-like muscle of the nose whose function is to compress the nasal cartilage. It consists of two parts, transverse and alar: The transverse part arises from the maxilla, above and lateral to the incisive fossa; its fibers proceed upward and medially, expanding into a thin aponeurosis which is continuous on the bridge of the nose with that of the muscle of the opposite side, and with the aponeurosis of the Procerus. The alar part is attached at one end to the greater alar cartilage, and at the other to the integument at the point of the nose. Other sources divide it into 'Compressor nasalis' and 'Dilator nasalis'. FMA:46770 @@ -559382,15 +558866,15 @@ nasalis muscle http://upload.wikimedia.org/wikipedia/commons/b/bb/Nasalis.png - + - + - + @@ -559403,19 +558887,19 @@ - + FMA-abduced-lr - + dbpedia - + dbpedia @@ -559503,17 +558987,17 @@ - - + + EHDAA2:0002079 UBERON:0010955 trapezius pre-muscle mass - + - + @@ -559526,13 +559010,13 @@ - + EHDAA2 - + EHDAA2 @@ -559542,7 +559026,7 @@ - + FMA:46638 pars pterygopharyngea (musculus constrictor pharyngis superior) pars pterygopharyngea musculus constrictoris pharyngis superioris @@ -559551,14 +559035,14 @@ UBERON:0010956 pterygopharyngeal part of superior pharyngeal constrictor - + - + FMA @@ -559588,9 +559072,9 @@ - - - + + + A single muscle, filling up the posterior concave surfaces of the arytenoid cartilages. It arises from the posterior surface and lateral border of one arytenoid cartilage, and is inserted into the corresponding parts of the opposite cartilage. It consists of oblique and transverse parts. TODO - check child relationships NCIT:C32149 @@ -559603,36 +559087,36 @@ arytenoid muscle http://upload.wikimedia.org/wikipedia/commons/5/52/Musculusarytenoideus.png - + - + - + - + recurrent laryngeal branch of the vagus dbpedia - + Arytenoid cartilage on one side dbpedia - + Arytenoid cartilage on opposite side dbpedia @@ -559685,7 +559169,7 @@ - + Any muscle organ that is part of either the head or the neck. NCIT:C32716 UMLS:C0448281 @@ -559694,14 +559178,14 @@ UBERON:0010959 craniocervical muscle - + - + prolog @@ -559723,17 +559207,17 @@ - - + + EHDAA2:0000455 UBERON:0010961 erector spinae pre-muscle mass - + - + @@ -559746,13 +559230,13 @@ - + EHDAA2 - + EHDAA2 @@ -559762,12 +559246,12 @@ - + EHDAA2:0000459 UBERON:0010962 extensor pre-muscle mass - + @@ -559780,7 +559264,7 @@ - + EHDAA2 @@ -559791,20 +559275,20 @@ - + EHDAA2:0003425 UBERON:0010963 isa row in EHDAA2 trunk and cervical myotome group - + - + EHDAA2 @@ -559815,17 +559299,17 @@ - - + + EHDAA2:0000843 UBERON:0010970 intercostal pre-muscle mass - + - + @@ -559838,13 +559322,13 @@ - + EHDAA2 - + EHDAA2 @@ -559871,17 +559355,17 @@ - - + + EHDAA2:0000470 UBERON:0010975 external oblique pre-muscle mass - + - + @@ -559894,13 +559378,13 @@ - + EHDAA2 - + EHDAA2 @@ -559910,12 +559394,12 @@ - + EHDAA2:0000543 UBERON:0010977 flexor pre-muscle mass - + @@ -559928,7 +559412,7 @@ - + EHDAA2 @@ -559955,17 +559439,17 @@ - - + + EHDAA2:0000933 UBERON:0010982 latissimus dorsi pre-muscle mass - + - + @@ -559978,13 +559462,13 @@ - + EHDAA2 - + EHDAA2 @@ -559994,17 +559478,17 @@ - - + + EHDAA2:0000993 UBERON:0010983 levator scapulae pre-muscle mass - + - + @@ -560017,13 +559501,13 @@ - + EHDAA2 - + EHDAA2 @@ -560033,17 +559517,17 @@ - - + + EHDAA2:0001423 UBERON:0010984 pectoral pre-muscle mass - + - + @@ -560056,13 +559540,13 @@ - + EHDAA2 - + EHDAA2 @@ -560072,17 +559556,17 @@ - - + + EHDAA2:0001636 UBERON:0010985 rhomboid pre-muscle mass - + - + @@ -560095,13 +559579,13 @@ - + EHDAA2 - + EHDAA2 @@ -560111,19 +559595,19 @@ - - + + EHDAA2:0001833 EHDAA:5992 serratus anterior pre-muscle mass UBERON:0010986 serratus ventralis pre-muscle mass - + - + @@ -560136,13 +559620,13 @@ - + EHDAA2 - + EHDAA2 @@ -560159,17 +559643,17 @@ - - + + EHDAA2:0001913 UBERON:0010987 sterno-mastoid pre-muscle mass - + - + @@ -560182,13 +559666,13 @@ - + EHDAA2 - + EHDAA2 @@ -560198,17 +559682,17 @@ - - + + EHDAA2:0002005 UBERON:0010988 teres major pre-muscle mass - + - + @@ -560221,13 +559705,13 @@ - + EHDAA2 - + EHDAA2 @@ -560248,7 +559732,7 @@ - + @@ -560260,14 +559744,14 @@ UBERON:0010989 transverospinalis pre-muscle mass - + - + EHDAA2 @@ -560283,7 +559767,7 @@ - + The transversospinal muscles are a group of muscles of the human back. Their combined action is rotation and extension of the vertebral column. They include: semispinalis, spanning 4-6 vertebral segments semispinalis dorsi semispinalis cervicis semispinalis capitis multifidus, spanning 2-4 vertebral segments rotatores, spanning 1-2 vertebral segments rotatores cervicis rotatores thoracis rotatores lumborum. EHDAA2:0002075 @@ -560302,7 +559786,7 @@ transversospinales muscle http://upload.wikimedia.org/wikipedia/commons/7/7f/Gray384.png - + @@ -560315,7 +559799,7 @@ - + EHDAA2 @@ -560369,19 +559853,19 @@ - + EMAPA:17750 UBERON:0010993 subscapularis pre-muscle mass - + - + EHDAA2 @@ -560391,7 +559875,7 @@ - + A triangular eminence projecting forward from the proximal epiphysis of the ulna[WP,modified]. coronoid process @@ -560407,14 +559891,14 @@ coronoid process of ulna http://upload.wikimedia.org/wikipedia/commons/6/60/Gray212.png - + - + FMA @@ -560514,7 +559998,7 @@ - + A thin layer of cartilage, usually hyaline, on the articular surface of bones in synovial joints. @@ -560543,7 +560027,7 @@ articular cartilage of joint - + @@ -560556,7 +560040,7 @@ - + Wikipedia @@ -560638,12 +560122,20 @@ - + + + + - + + + + + + @@ -560661,22 +560153,12 @@ pharyngeal arch cartilage - - - - ZFA - - - - - ZFA - @@ -560863,9 +560345,9 @@ - - - + + + Brachioradialis is a muscle of the forearm that acts to flex the forearm at the elbow. It is also capable of both pronation and supination, depending on the position of the forearm. It is attached to the distal styloid process of the radius by way of the brachioradialis tendon, and to the lateral supracondylar ridge of the humerus. FMA:38485 @@ -560878,35 +560360,35 @@ brachioradialis http://upload.wikimedia.org/wikipedia/commons/9/92/Brachioradialis.png - + - + - + - + dbpedia - + Lateral supracondylar ridge of the humerus dbpedia - + Distal radius dbpedia @@ -560936,9 +560418,9 @@ - - - + + + The flexor pollicis brevis is a muscle in the hand that flexes the thumb. It is one of three thenar muscles. It has both a superficial part and a deep part. FMA:37378 @@ -560951,34 +560433,34 @@ flexor pollicis brevis muscle http://upload.wikimedia.org/wikipedia/commons/c/ca/Musculusflexorpollicisbrevis.png - + - + - + - + dbpedia - + dbpedia - + Extensor pollicis longus and brevis dbpedia @@ -561008,12 +560490,12 @@ - - - - - - + + + + + + The spinalis is the portion of the erector spinae, a bundle of muscles and tendons, located nearest to the spine. It is divided into three parts. [WP,unvetted]. BTO:0002621 FMA:77179 @@ -561028,27 +560510,27 @@ spinalis muscle http://upload.wikimedia.org/wikipedia/commons/a/a4/Spinalis.png - + - + - + - + - + - + @@ -561061,40 +560543,40 @@ - + BTO - + dbpedia - + spinous process Thoracis: Upper lumbar and lower thoracic vertebrae. Cervicis: Ligamentum nuchae and spinous process of C7. dbpedia - + spinous process Thoracis: Upper lumbar and lower thoracic vertebrae. Cervicis: Ligamentum nuchae and spinous process of C7. dbpedia - + spinous process Thoracis: SP of upper thoracic vertebrae. Cervicis: SP of cervical vertebrae except C1. dbpedia - + spinous process Thoracis: SP of upper thoracic vertebrae. Cervicis: SP of cervical vertebrae except C1. dbpedia @@ -561210,7 +560692,7 @@ - + The pyramidalis is a small and triangular muscle, anterior to the Rectus abdominis, and contained in the rectus sheath. FMA:15568 @@ -561226,7 +560708,7 @@ pyramidalis http://upload.wikimedia.org/wikipedia/commons/9/91/Gray397.png - + @@ -561239,7 +560721,7 @@ - + pubic symphysis and pubic crest dbpedia @@ -561315,9 +560797,9 @@ - - - + + + A muscle that originates from the cuboid bone and divides into two portions, which are inserted into the medial and lateral sides of the base of the first phalanx of the great toe, a sesamoid bone being present in each tendon at its insertion. EMAPA:36259 @@ -561334,15 +560816,15 @@ flexor hallucis brevis muscle http://upload.wikimedia.org/wikipedia/commons/5/58/Musculus_flexor_hallucis_brevis.png - + - + - + @@ -561355,21 +560837,21 @@ - + plantar surface of cuneiform bones dbpedia - + medial and lateral sesamoid bones of first metatarsal dbpedia - + medial and lateral sesamoid bones of first metatarsal dbpedia @@ -561464,7 +560946,7 @@ - + @@ -561497,7 +560979,7 @@ aryepiglotticus muscle http://upload.wikimedia.org/wikipedia/commons/5/52/Musculusarytenoideus.png - + @@ -561510,7 +560992,7 @@ - + FMA @@ -561625,7 +561107,7 @@ - + The obturator internus muscle originates on the medial surface of the obturator membrane, the ischium near the membrane, and the rim of the pubis. It exits the pelvic cavity through the lesser sciatic foramen. The obturator internus is situated partly within the lesser pelvis, and partly at the back of the hip-joint. It functions to help laterally rotate extended thigh and abduct flexed thigh, as well as to steady the femoral head in the acetabulum. Originates on the entire lateral surface of the pelvic rim. Dorsal fibers insert distally to the dorso-medial surface of the caput femoris and ventral fibers extend around the acetabulum to insert on the tendon of the caput femoris.[AAO] Definition generalized to accommodate AAO class - 'Originates on the entire lateral surface of the pelvic rim. Dorsal fibers insert distally to the dorso-medial surface of the caput femoris and ventral fibers extend around the acetabulum to insert on the tendon of the caput femoris.' [AAO:0010052] @@ -561646,7 +561128,7 @@ obturator internus http://upload.wikimedia.org/wikipedia/commons/5/55/Posterior_Hip_Muscles_1.PNG - + @@ -561659,7 +561141,7 @@ - + medial aspect of the Greater trochanter dbpedia @@ -561828,7 +561310,7 @@ - + The eighth thoracic vertebra counting from the top down. Note that members of this class are not necessarily homologous[ncit,modified]. EMAPA:19549 @@ -561844,7 +561326,7 @@ thoracic vertebra 8 - + @@ -561857,7 +561339,7 @@ - + FMA @@ -561898,7 +561380,7 @@ - + @@ -561922,14 +561404,14 @@ UBERON:0011060 perilymphatic channel - + - + MA @@ -561977,7 +561459,7 @@ - + @@ -561991,14 +561473,14 @@ UBERON:0011078 endolymphatic space - + - + Wikipedia @@ -562016,8 +561498,8 @@ - - + + Dermal bone that is located posterior to the dentary and lateral to the articular and retroarticular bones of the lower jaw. The angular forms the outer dermal sheet of the posterior part of the lower jaw. The angular bears a portion of the mandibular sensory canal. The angular is a paired bone. The angular fuses with the articular bone in clupeocephalans forming the anguloarticular. angular @@ -562031,11 +561513,11 @@ UBERON:0011079 angular bone - + - + @@ -562048,14 +561530,14 @@ - + mandibular series ISBN:0073040584 - + AAO @@ -562103,7 +561585,7 @@ - + @@ -562129,7 +561611,7 @@ palatoquadrate arch - + @@ -562142,7 +561624,7 @@ - + VHOG @@ -562601,7 +562083,7 @@ - + The lacrimal nerve is the smallest of the three branches of the ophthalmic division of the trigeminal nerve. FMA:52628 @@ -562613,14 +562095,14 @@ lacrimal nerve - + - + FMA @@ -562687,7 +562169,7 @@ - + A cruciate ligament in the neck forming part of the atlanto-axial joint. It consists of the transverse ligament of the atlas, along with additional fibers above and below. EMAPA:19010 FMA:25018 @@ -562701,14 +562183,14 @@ UBERON:0011106 cruciate ligament of atlas - + - + Wikipedia FMA @@ -562888,7 +562370,7 @@ - + @@ -562912,14 +562394,14 @@ humeroulnar joint http://upload.wikimedia.org/wikipedia/commons/9/97/Gray329.png - + - + FMA @@ -562963,7 +562445,7 @@ - + @@ -562987,14 +562469,14 @@ humeroradial joint http://upload.wikimedia.org/wikipedia/commons/9/97/Gray329.png - + - + FMA @@ -563752,20 +563234,20 @@ - + EMAPA:18714 temporo-mandibular joint primordium UBERON:0011130 temporomandibular joint primordium - + - + EMAPA @@ -563799,7 +563281,7 @@ - + A skeletal joint that connects two adjacent metacarpals[FMA,modified]. FMA:35288 SCTID:303065007 @@ -563809,14 +563291,14 @@ UBERON:0011131 intermetacarpal joint - + - + two adjacent metacarpals @@ -563856,8 +563338,8 @@ - - + + A skeletal joint that connects two carpal bones. FMA:35292 MESH:D050824 @@ -563873,24 +563355,24 @@ intercarpal joint http://upload.wikimedia.org/wikipedia/commons/3/37/Gray336.png - + - + - + FMA - + two adjacent carpals @@ -563960,7 +563442,7 @@ - + A joint that connects two adjacent metatarsals. In humans: The base of the first metatarsal is not connected with that of the second by any ligaments; in this respect the great toe resembles the thumb FMA:35219 @@ -563970,14 +563452,14 @@ intermetatarsal joint http://upload.wikimedia.org/wikipedia/commons/d/dc/Gray358.png - + - + two adjacent metatarsals @@ -564042,33 +563524,33 @@ - - + + A cartilage element that lies between two successive vertebral centra. Block of cartilage, which usually ossifies, that lies between successive vertebral centra.[AAO] AAO:0000795 UBERON:0011135 intervertebral cartilage - + - + - + FMA MA - + between two centra @@ -564175,7 +563657,7 @@ - + Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. axial skeletal system @@ -564185,7 +563667,7 @@ postcranial axial skeletal system http://purl.obolibrary.org/obo/uberon/docs/The-axial-skeleton - + @@ -564198,7 +563680,7 @@ - + cjm @@ -564453,7 +563935,7 @@ - + Subdivision of urinary system which consists of the kidney and the ureters. FMA:45658 @@ -564465,14 +563947,14 @@ upper urinary tract - + - + FMA-abduced-lr @@ -564500,7 +563982,7 @@ - + @@ -564519,14 +564001,14 @@ adductor muscle of hip http://upload.wikimedia.org/wikipedia/commons/e/e2/Anterior_Hip_Muscles_2.PNG - + - + a small part of adductor magnus is innervated by the tibial nerve dbpedia @@ -564680,7 +564162,7 @@ - + Gland of the lamina epithelialis mucosae which perforate the lamina muscularis, with their adenomeres located in the submucosal connective tissue. BTO:0003751 EMAPA:37970 @@ -564688,14 +564170,14 @@ UBERON:0011148 submucosal gland - + - + perforates @@ -564718,7 +564200,7 @@ - + @@ -564732,14 +564214,14 @@ UBERON:0011149 Marshall's gland - + - + BTO @@ -564999,7 +564481,7 @@ - + AAO:0010371 TAO:0001401 XAO:0003178 @@ -565010,14 +564492,14 @@ UBERON:0011152 dorsal hyoid arch skeleton - + - + AAO @@ -565039,7 +564521,7 @@ - + AAO:0010372 EFO:0003684 TAO:0001402 @@ -565052,14 +564534,14 @@ ventral hyoid arch skeleton - + - + AAO @@ -565153,7 +564635,7 @@ - + Subdivision of skull that consists of the facial bones. EHDAA2:0002206 EHDAA:8361 @@ -565171,7 +564653,7 @@ facial skeleton http://upload.wikimedia.org/wikipedia/commons/7/77/Illu_facial_bones.jpg - + @@ -565184,7 +564666,7 @@ - + FMA @@ -565547,7 +565029,7 @@ - + @@ -565561,14 +565043,14 @@ UBERON:0011163 supraoccipital pre-cartilage condensation - + - + EHDAA2-inferred @@ -565754,7 +565236,7 @@ - + Paired, intramembranous bones located within the nasal capsules and embedded in the nasal cartilages; it is pierced by the ductus nasolacrimalis. @@ -565774,14 +565256,14 @@ A small dermal bone of the facial series that is often absent; when present it is usually sunken beneath the surface bones and aids in forming the nasal cavity septomaxilla bone - + - + AAO @@ -565865,19 +565347,19 @@ - - + + A bone behind and above the orbit of which it commonly forms part of the border that is present in many vertebrates and corresponds to the postorbital process of the frontal bone of various birds and mammals. postfrontal UBERON:0011168 postfrontal bone - + - + @@ -565890,14 +565372,14 @@ - + orbital series ISBN:0073040584 - + ISBN:0073040584 @@ -565920,19 +565402,19 @@ - - + + The postorbital is one of the bones in vertebrate skulls which forms a portion of the dermal skull roof and, sometimes, a ring about the orbit. Generally, it is located behind the postfrontal and posteriorly to the orbital fenestra. In some vertebrates, the postorbital is fused with the postfrontal to create a postorbitofrontal. postorbital Wikipedia:Postorbital_bone UBERON:0011169 postorbital bone - + - + @@ -565945,14 +565427,14 @@ - + orbital series ISBN:0073040584 - + ISBN:0073040584 @@ -566107,7 +565589,7 @@ - + The term retrorubral area of the midbrain reticular nucleus refers to a region of the rat brain caudal and dorsal to the ventral tegmental area. It is one of three parts of the midbrain reticular nucleus; the other two are the magnocellular part of the midbrain reticular nucleus and the parvicellular part of the midbrain reticular nucleus (Swanson-2004). BrainInfo distinguishes between the Retrorubral area of the midbrain reticular formation and the retrorubral nucleus. A8 retrorubal field @@ -566128,14 +565610,14 @@ UBERON:0011172 retrorubral area of midbrain reticular nucleus - + - + Obol @@ -566218,7 +565700,7 @@ - + One of two divisions of the nuclei of stria terminalis based on topology, connectivity and multiple stains in the rat ( Swanson-2004 ) and the mouse ( Dong-2004 ). The other division consists of the posterior nuclei of stria terminalis. The anterior division includes the anterolateral area of stria terminalis, anteromedial area of stria terminalis, oval nucleus of stria terminalis, juxtacapsular nucleus of stria terminalis, rhomboid nucleus of stria terminalis, dorsomedial nucleus of stria terminalis, fusiform nucleus of stria terminalis, ventral nucleus of stria terminalis, and the magnocellular nucleus of stria terminalis. anterior division @@ -566238,14 +565720,14 @@ UBERON:0011173 anterior division of bed nuclei of stria terminalis - + - + MA @@ -566327,7 +565809,7 @@ - + A component of the nuclei of stria terminalis defined on the basis of topology, connectivity and multiple stains in the rat. It is one of nine components of the anterior nuclei of stria terminalis in the Functional CNS Model -Rat ( Swanson-2004 ). fusiform nucleus BAMS:BSTfu @@ -566344,14 +565826,14 @@ UBERON:0011175 fusiform nucleus of stria terminalis - + - + MA @@ -566415,7 +565897,7 @@ - + A component of the nuclei of stria terminalis defined on the basis of topology, connectivity and multiple stains in the rat. It is one of nine components of the anterior nuclei of stria terminalis in the Functional CNS Model - Rat (Swanson-2004). EMAPA:37667 MA:0000929 @@ -566427,14 +565909,14 @@ UBERON:0011176 oval nucleus of stria terminalis - + - + MA @@ -566468,7 +565950,7 @@ - + One of two divisions of the nuclei of stria terminalis based on topology, connectivity and multiple stains in the rat ( Swanson-2004 ) and the mouse ( Dong-2004 ). The other division consists of the anterior nuclei of stria terminalis. The posterior division includes the principal nucleus of stria terminalis, interfascicular nucleus of stria terminalis, transverse nucleus of stria terminalis, premedullary nucleus of stria terminalis, dorsal nucleus of stria terminalis, the strial extension of stria terminalis, and the cell sparse zone of stria terminalis. posterior division BAMS:BSTp @@ -566485,14 +565967,14 @@ UBERON:0011177 posterior division of bed nuclei of stria terminalis - + - + MA @@ -566556,7 +566038,7 @@ - + A component of the nuclei of stria terminalis defined on the basis of topology, connectivity and multiple stains in the rat. It is one of seven components of the posterior nuclei of stria terminalis in the Functional CNS Model - Rat ( Swanson-2004 ). principal nucleus BAMS:BSTpr @@ -566571,14 +566053,14 @@ UBERON:0011178 principal nucleus of stria terminalis - + - + MA @@ -566630,7 +566112,7 @@ - + A component of the nuclei of stria terminalis defined on the basis of topology, connectivity and multiple stains in the rat. It is one of seven components of the posterior nuclei of stria terminalis in the Functional CNS Model - Rat (Swanson-2004). transverse nucleus BAMS:BSTtr @@ -566645,14 +566127,14 @@ UBERON:0011179 transverse nucleus of stria terminalis - + - + MA @@ -566880,7 +566362,7 @@ - + Small, mucous accessory lacrimal glands that are found underneath the eyelid where the upper and lower conjuctivae meet. Their ducts unite into a rather long sinus which open into the fornix conjunctiva. There are approximately forty Krause glands in the region of the upper eyelid, and around 6 to 8 in the region of the lower lid. The function of these glands are to produce tears which are secreted onto the surface of the conjuctiva. accessory lacrimal gland conjunctival gland @@ -566894,14 +566376,14 @@ UBERON:0011186 Krause's gland - + - + ncithesaurus @@ -566942,7 +566424,7 @@ - + The greater tubercle of the humerus is situated lateral to the head of the humerus and posteriolateral to the lesser tubercle. Its upper surface is rounded and marked by three flat impressions. the highest of these gives ('superior facet') insertion to the Supraspinatus the middle ('middle facet') to the Infraspinatus. the lowest one ('inferior facet'), and the body of the bone for about 2.5 cm. below it, to the Teres minor. The lateral surface of the greater tubercle is convex, rough, and continuous with the lateral surface of the body. Between the greater tubercle and the lesser tubercle is the intertubercular sulcus (bicipital groove). FMA:23390 NCIT:C32700 @@ -566960,7 +566442,7 @@ ventral tubercle of humerus http://upload.wikimedia.org/wikipedia/commons/3/3b/Gray326.png - + @@ -566973,7 +566455,7 @@ - + FMA @@ -567039,7 +566521,7 @@ - + The lesser tubercle of the humerus, although smaller, is more prominent than the greater tubercle: it is situated in front, and is directed medially and anteriorly. Above and in front it presents an impression for the insertion of the tendon of the Subscapularis. FMA:23393 @@ -567057,7 +566539,7 @@ lesser tubercle of humerus http://upload.wikimedia.org/wikipedia/commons/3/31/Tuberculumminushumeri.png - + @@ -567070,7 +566552,7 @@ - + FMA @@ -567134,7 +566616,7 @@ - + A lamina propria that is part of a large intestine. FMA:15654 @@ -567147,14 +566629,14 @@ lamina propria of large intestine - + - + FMA @@ -567446,7 +566928,7 @@ - + An epithelium that is part of a inferior parathyroid gland. EHDAA2:0000824 EHDAA:3868 @@ -567454,14 +566936,14 @@ UBERON:0011195 inferior parathyroid epithelium - + - + EHDAA2 @@ -567500,21 +566982,21 @@ - + An epithelium that is part of a superior parathyroid gland. EHDAA2:0001957 EHDAA:3874 UBERON:0011196 superior parathyroid epithelium - + - + EHDAA2 @@ -567603,7 +567085,7 @@ - + A muscle layer that is part of a large intestine. FMA:14971 NCIT:C32927 @@ -567615,14 +567097,14 @@ UBERON:0011198 muscle layer of large intestine - + - + FMA @@ -567669,7 +567151,7 @@ - + A small indentation located in the prostatic urethra, at the apex of the urethral crest, on the seminal colliculus (verumontanum), laterally flanked by openings of the ejaculatory ducts. add df relations. Check mesopnephric duct FMA:19702 @@ -567691,14 +567173,14 @@ http://upload.wikimedia.org/wikipedia/commons/d/d4/Gray1153.png https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.2/assets/3d-vh-m-prostate.glb - + - + FMA @@ -567865,7 +567347,7 @@ - + A muscle layer that is part of a small intestine. FMA:14932 NCIT:C33569 @@ -567880,14 +567362,14 @@ UBERON:0011201 muscle layer of small intestine - + - + FMA @@ -568297,18 +567779,18 @@ - - + + migration pathway mesenchyme NC migration pathway UBERON:0011210 migration pathway NC-derived mesenchyme - + - + @@ -568321,13 +567803,13 @@ - + EHDAA2-abduced - + EHDAA2-abduced ZFA-abduced @@ -568572,8 +568054,8 @@ - - + + EMAPA:36269 FMA:13400 SCTID:244934006 @@ -568583,11 +568065,11 @@ UBERON:0011217 serratus dorsalis muscle - + - + @@ -568600,13 +568082,13 @@ - + dbpedia-abduced - + dbpedia-abduced @@ -568628,7 +568110,7 @@ - + Origin: spinous processes of seventh cervical and sometimes two upper thoracic vertebrae; insertion: spinous processes of axis and sometimes of second to fourth cervical vertebrae; innervation: branches of cervical; action: extends vertebral column. BTO:0002623 @@ -568641,7 +568123,7 @@ The Spinalis cervicis (Spinalis colli) is an inconstant muscle, which arises from the lower part of the ligamentum nuchæ, the spinous process of the seventh cervical, and sometimes from the spinous processes of the first and second thoracic vertebrae, and is inserted into the spinosus process of the axis, and occasionally into the spinous processes of the two vertebrae below it. [Wikipedia:Spinalis#Spinalis_cervivis] spinalis cervicis muscle - + @@ -568654,7 +568136,7 @@ - + also spinous process of C7 dbpedia @@ -568731,7 +568213,7 @@ - + The mastoid process is a conical prominence projecting from the undersurface of the mastoid portion of the temporal bone. It is located just behind the external acoustic meatus, and lateral to the styloid process. Its size and form vary somewhat; it is larger in the male than in the female. This process serves for the attachment of the posterior belly of the digastric, sternocleidomastoid, splenius capitis, and longissimus capitis muscles. The word is derived from the Greek 'masto-', alluding to its resemblance to the breast. FMA:52872 NCIT:C12503 @@ -568746,7 +568228,7 @@ mastoid process of temporal bone - + @@ -568759,7 +568241,7 @@ - + ncithesaurus @@ -568866,7 +568348,7 @@ - + Muscles within the eye (bulbus oculi).[AAO] AAO:0010038 EMAPA:18808 @@ -568876,14 +568358,14 @@ UBERON:0011222 intra-ocular muscle - + - + EMAPA @@ -569103,7 +568585,7 @@ - + An ossified mesethmoid element. Endochondral bone that extends forward from the frontal bones and articulates posterolaterally with the lateral ethmoids and the vomer and parasphenoid ventrally. The mesethmoid is an unpaired bone[TAO:0000323]. TAO:0000323 @@ -569112,14 +568594,14 @@ UBERON:0011238 mesethmoid bone - + - + ZFA @@ -569179,9 +568661,9 @@ - - - + + + Region between capsules formed by anterior tips of neurocranial trabeculae. Anterior wall of the braincase.[AAO] Chondrocranium cartilage that is initially plate-like and formed from the anterior fusion of the trabecula crani. The ethmoid cartilage is paired.[TAO] @@ -569196,15 +568678,15 @@ ethmoid cartilage - + - + - + @@ -569217,19 +568699,19 @@ - + FMA - + AAO - + ISBN:0073040584 @@ -569282,7 +568764,7 @@ - + The perpendicular plate of the ethmoid bone (vertical plate) is a thin, flattened lamina, polygonal in form, which descends from the under surface of the cribriform plate, and assists in forming the septum of the nose; it is generally deflected a little to one or other side. The anterior border articulates with the spine of the frontal bone and the crest of the nasal bones. The posterior border articulates by its upper half with the sphenoidal crest, by its lower with the vomer. The inferior border is thicker than the posterior, and serves for the attachment of the septal cartilage of the nose. The surfaces of the plate are smooth, except above, where numerous grooves and canals are seen; these lead from the medial foramina on the cribriform plate and lodge filaments of the olfactory nerves. perpendicular plate EMAPA:25114 @@ -569298,7 +568780,7 @@ UBERON:0011244 perpendicular plate of ethmoid - + @@ -569311,7 +568793,7 @@ - + FMA @@ -569711,14 +569193,14 @@ - + - + A skeletal muscle in the posterior triangle of the neck. It originates on the transverse processes of the upper cervical vertebrae and is inserted in the lateral half of the clavicle. Cleidocervicalis is one of two muscles, which make up the cleidocephalic component of the complex brachiocephalic muscle. It is a thin triangular muscle which has a broad origin on the median raphe of the mid dorsal aspect of the neck. The muscle is bounded caudally by the trapezius and cranially by the occipital component of the sternocephalicus . The cleidocervicalis tapers as it passes ventrally across the side of the neck to insert into the clavicular tendon. It is innervated by the accessory nerve. The brachiocephalic complex advances the limb, extends the shoulder joint and fixes the neck. The levator claviculae is an infrequently recognized anatomical variant in humans, distinguished from, for example, cervical adenopathy or a thrombosed vein, but a normal muscle in lower mammals and anthropoids. In humans, when present, it often appears unilaterally, most commonly on the left side, or bilaterally. @@ -569733,25 +569215,25 @@ UBERON:0011251 levator claviculae muscle - + - + - + nterior portion of transverse processes of C1 - C4 vertebrae dbpedia - + lateral half Wikipedia @@ -569946,8 +569428,8 @@ - - + + @@ -569958,24 +569440,24 @@ UBERON:0011263 femoral gland - + - + - + ISBN:0073040584 - + ISBN:0073040584 @@ -570143,7 +569625,7 @@ - + The quadratojugal is a small jaw bone that is present in most amphibians, reptiles, and birds, but has been lost in mammals. It is connected to the jugal as well as other bones, though these may vary with species. The quadratojugal bone is a small bone between the cheek and otic notch (Lecointre 380). Squamates (lizards and snakes) lack a quadratojugal bone (Schwenk 193). @@ -570161,7 +569643,7 @@ http://upload.wikimedia.org/wikipedia/commons/e/eb/Skull_synapsida_1.png https://upload.wikimedia.org/wikipedia/commons/6/6e/Archaeopteryx_skull.png - + @@ -570174,7 +569656,7 @@ - + temporal series ISBN:0073040584 @@ -570251,7 +569733,7 @@ - + A secondary tongue located below the primary tongue in prosimian primates and some primitive mammals. This structure does not have taste buds or salivary glands. Wikipedia:Sublingua @@ -570260,14 +569742,14 @@ UBERON:0011268 sublingua - + - + Wikipedia @@ -570301,7 +569783,7 @@ - + The part of the trunk that is in the dorsum[cjm]. In humans, the subdivision of trunk which is demarcated from the trunk proper by the external surface of the posterolateral part of the rib cage, the anterior surface of the thoracic vertebral column and the posterior axillary lines, the external surface of the posterior abdominal wall; together with the trunk proper, it constitutes the trunk[FMA] EMAPA:35162 @@ -570315,7 +569797,7 @@ UBERON:0011270 dorsal trunk - + @@ -570328,7 +569810,7 @@ - + FMA @@ -570400,8 +569882,8 @@ - - + + compare with 'stratum basale of epidermis'. This class is the source for many adult structures - see WP2062. See also: 'enveloping layer of ectoderm' EHDAA2:0001845 basal cell layer of skin @@ -570409,11 +569891,11 @@ UBERON:0011272 embryonic skin basal layer - + - + @@ -570426,13 +569908,13 @@ - + EHDAA2 - + EHDAA2 @@ -571298,8 +570780,8 @@ - - + + A remnant of the Mesonephric duct that can be found next to the ovary and fallopian tube. FMA:18691 Wikipedia:Epoophoron @@ -571313,11 +570795,11 @@ UBERON:0011283 epoophoron - + - + @@ -571330,13 +570812,13 @@ - + Wikipedia - + Wikipedia @@ -571502,12 +570984,6 @@ UBERON:0011289 pharyngobasilar fascia - - - - - FMA - @@ -571709,19 +571185,19 @@ - - + + EHDAA2:0001063 EHDAA:9563 manubrium sterni pre-cartilage condensation UBERON:0011301 manubrium sternum pre-cartilage condensation - + - + @@ -571734,13 +571210,13 @@ - + EHDAA2 - + EHDAA2 @@ -571872,7 +571348,7 @@ - + The superficial temporalis muscle is a separable part of the temporalis muscle that attaches to the temporalis fascia. MFMO:0000087 @@ -571885,14 +571361,14 @@ UBERON:0011305 superficial part of temporalis - + - + MFMO @@ -572041,7 +571517,7 @@ - + The suprazygomatic part of the temporalis muscle is a separable part of the deep temporalis that attaches to the superior surface of the temporal root of the zygomatic arch. MFMO:0000088 temporalis pars suprazygomatica @@ -572049,14 +571525,14 @@ UBERON:0011307 suprazygomatic part of temporalis - + - + FEED @@ -572130,7 +571606,7 @@ - + The zone of the mandible that carries the teeth. FMA:52827 @@ -572143,14 +571619,14 @@ body of mandible - + - + FMA @@ -572185,21 +571661,21 @@ - + .The fossa for the masseter. In some therapsids, the coronoid process of the dentary bears a large external depression which accommodates the masseter -- an important muscle in closing and in grinding motions of the jaw. fossa on the lateral surface of the mandible, located in the superior part of the ascending process.[FEED] masseteric cavity UBERON:0011310 masseteric fossa - + - + FMA @@ -572722,7 +572198,7 @@ - + The fibrocartilaginous plate that separates the joint into upper and lower cavities. BTO:0003675 FMA:57059 @@ -572742,7 +572218,7 @@ UBERON:0011319 disk of temporomandibular joint - + @@ -572755,7 +572231,7 @@ - + BTO @@ -572889,7 +572365,7 @@ - + A muscular branch of the mandibular nerve passing to the medial surface of the masseter muscle, which it innervates. FMA:53103 SCTID:280254006 @@ -572898,14 +572374,14 @@ UBERON:0011321 masseteric nerve - + - + FMA @@ -573067,8 +572543,8 @@ - - + + The superior laryngeal nerve is a branch of the vagus nerve. It arises from the middle of the ganglion nodosum and in its course receives a branch from the superior cervical ganglion of the sympathetic. It descends, by the side of the pharynx, behind the internal carotid artery, and divides into two branches: external laryngeal nerve internal laryngeal nerve A superior laryngeal nerve palsy changes the pitch of the voice and causes an inability to make explosive sounds. If no recovery is evident three months after the palsy initially presents, the damage is most likely to be permanent. A bilateral palsy presents as a tiring and hoarse voice. BAMS:sln @@ -573083,24 +572559,24 @@ superior laryngeal nerve - + - + - + Wikipedia - + FMA @@ -573147,7 +572623,7 @@ - + The deep temporal nerves, branches of the mandibular division of the trigeminal nerve, are two in number, anterior and posterior. They pass above the upper border of the pterygoideus externus and enter the deep surface of the temporalis. FMA:53187 SCTID:280255007 @@ -573157,14 +572633,14 @@ UBERON:0011327 deep temporal nerve - + - + FMA @@ -573636,7 +573112,7 @@ - + This is a neurosecretory organ rostral to the ampulla caudalis on the ventral surface of the distal end of the spinal cord. Receives axons from caudal neurosecretory nucleus, which contains Dahlgren cells that secrete urotensin I and II, implicated in osmotic regulation, cardiovascular function and reproduction[Butler]. BTO:0001848 @@ -573644,7 +573120,7 @@ Shares characteristics with neurohypophysis urophysis - + @@ -573657,7 +573133,7 @@ - + BTO @@ -573679,19 +573155,19 @@ - + A ventricle-like space at the end of the central canal. UBERON:0011360 ampulla caudalis - + - + in caudal end of @@ -574124,7 +573600,7 @@ - + A transverse process of vertebra that is part of a vertebral bone 1. FMA:23981 SCTID:181895009 @@ -574132,14 +573608,14 @@ UBERON:0011370 transverse process of atlas - + - + FMA-abduced-lr @@ -574162,7 +573638,10 @@ - + + + + @@ -574177,7 +573656,12 @@ - + + + + + + @@ -574191,16 +573675,6 @@ UBERON:0011371 sternocephalicus muscle - - - - - - - - - nuchal crest - @@ -574715,7 +574189,7 @@ - + A chiasma of facial muscles held together by fibrous tissue, located lateral and slightly superior to each angle of the mouth. It is important in moving the mouth, facial expression and in dentistry. It derives its motor nerve supply from the facial nerve, and its blood supply from labial branches of the facial artery. It is contributed to by the following muscles: orbicularis oris, buccinator, levator anguli oris, depressor anguli oris, zygomaticus major, risorius quadratus labii superioris, quadratus labii inferioris. modiolus FMA:46837 @@ -574726,14 +574200,14 @@ facial modiolus https://github.com/obophenotype/uberon/issues/471 - + - + FMA @@ -575121,7 +574595,7 @@ - + @@ -575144,7 +574618,7 @@ UBERON:0011392 blood vessel internal elastic membrane - + @@ -575157,7 +574631,7 @@ - + MA @@ -575555,7 +575029,7 @@ - + @@ -575584,14 +575058,14 @@ iliococcygeus muscle - + - + FMA @@ -575650,7 +575124,7 @@ - + @@ -575669,14 +575143,14 @@ puborectalis muscle - + - + FMA @@ -575710,7 +575184,7 @@ - + @@ -575749,14 +575223,14 @@ pubococcygeus muscle - + - + FMA @@ -575993,7 +575467,7 @@ - + The Chondroglossus is sometimes described as a part of the Hyoglossus, but is separated from it by fibers of the Genioglossus, which pass to the side of the pharynx. It is about 2 cm. long, and arises from the medial side and base of the lesser cornu and contiguous portion of the body of the hyoid bone, and passes directly upward to blend with the intrinsic muscular fibers of the tongue, between the Hyoglossus and Genioglossus. FMA:46700 SCTID:244787000 @@ -576005,14 +575479,14 @@ UBERON:0011535 chondroglossus muscle - + - + FMA @@ -576129,7 +575603,7 @@ - + @@ -576152,14 +575626,14 @@ lumen of esophagus - + - + FMA @@ -576242,7 +575716,7 @@ - + The styloid process of the ulna projects from the medial and back part of the bone; it descends a little lower than the head, and its rounded end affords attachment to the ulnar collateral ligament of the wrist[WP,unvetted]. FMA:23628 @@ -576255,14 +575729,14 @@ styloid process of ulna - + - + FMA @@ -576481,8 +575955,8 @@ - - + + @@ -576497,24 +575971,24 @@ UBERON:0011577 flexural organ - + - + - + ZFA - + unvetted @@ -576638,7 +576112,7 @@ - + @@ -576655,14 +576129,14 @@ paired limb/fin skeleton - + - + ISBN:9780878932504 @@ -576704,7 +576178,7 @@ - + @@ -576726,14 +576200,14 @@ UBERON:0011583 stylopodial skeleton - + - + VSAO @@ -576795,7 +576269,7 @@ - + @@ -576822,14 +576296,14 @@ UBERON:0011584 zeugopodial skeleton - + - + VSAO @@ -576926,7 +576400,7 @@ - + Odontogenic tissue that is collagen-rich and characteristic of vertebrate teeth and tooth-like structures (e.g., odontodes) deposited by preodontoblasts and odontoblasts that are typically excluded from the matrix. EMAPA:36439 VSAO:0000071 @@ -576937,7 +576411,7 @@ UBERON:0011587 pre-dentine - + @@ -576950,7 +576424,7 @@ - + text definition @@ -577144,18 +576618,18 @@ - - + + EHDAA2:0002120 upper jaw future lip UBERON:0011592 future upper lip - + - + @@ -577168,13 +576642,13 @@ - + fusion - + fusion @@ -577327,7 +576801,7 @@ - + @@ -577341,14 +576815,14 @@ jaw region http://eol.org/collections/11578 - + - + EMAPA FMA-abduced ZFA-abduced @@ -577367,13 +576841,13 @@ - + EHDAA2:0001020 lower jaw future lip UBERON:0011596 future lower lip - + @@ -577386,7 +576860,7 @@ - + Wikipedia:Mandibular_prominence @@ -577440,14 +576914,14 @@ - + coronoid process AAO:0000103 TAO:0001673 UBERON:0011598 coronoid bone - + @@ -577460,7 +576934,7 @@ - + mandibular series ISBN:0073040584 @@ -577477,7 +576951,7 @@ - + @@ -577498,14 +576972,14 @@ UBERON:0011599 lenticular process of incus bone - + - + FMA @@ -577741,7 +577215,7 @@ - + @@ -577757,14 +577231,14 @@ carina of sternum http://upload.wikimedia.org/wikipedia/commons/6/69/Br%C3%A9chet.png - + - + Wikipedia @@ -577837,7 +577311,7 @@ - + Replacement bone that is bilaterally paired and (in teleosts) articulates with the neurocranium dorsally and the opercle posteriorly[TAO,modified]. Replacement bone that is bilaterally paired and articulates with the neurocranium dorsally and the opercle posteriorly.[TAO] relationship loss: overlaps hyomandibula-metapterygoid joint (TAO:0001979)[TAO] @@ -577856,7 +577330,7 @@ hyomandibular bone - + @@ -577869,7 +577343,7 @@ - + TAO @@ -578149,19 +577623,19 @@ - + keratohyal element UBERON:0011609 ceratohyal element - + - + TAO-abduced @@ -578255,7 +577729,7 @@ - + Replacement bone that is bilaterally paired and articulates with the hypohyal cartilage or bone, dorsal and ventral hypohyals, and posterior ceratohyal posteriorly.[TAO] relationship loss: overlaps ceratohyal-branchiostegal ray joint (TAO:0001850)[TAO] @@ -578285,7 +577759,7 @@ UBERON:0011611 ceratohyal bone - + @@ -578298,7 +577772,7 @@ - + TAO @@ -578475,19 +577949,19 @@ - + The hypohyal is a ventral element of the hyoid arch which links the ceratohyal and the basihyal. UBERON:0011613 hypohyal element - + - + TAO-abduced @@ -578503,20 +577977,20 @@ - + Skeletal element that is median and is the anterior-most element of the ventral hyoid arch. TAO:0001891 UBERON:0011614 basihyal element - + - + TAO @@ -578588,7 +578062,7 @@ - + Replacement bone that is median and is the anterior-most bone of the ventral hyoid arch. TAO:0000316 VSAO_RETIRED:0000007 @@ -578598,7 +578072,7 @@ UBERON:0011618 basihyal bone - + @@ -578611,7 +578085,7 @@ - + TAO @@ -578938,7 +578412,7 @@ - + A zone of the frontal bone that consists of two thin triangular plates, the orbital plates, which form the vaults of the orbits, and are separated from one another by a median gap, the ethmoidal notch. FMA:52849 Wikipedia:Orbital_part_of_frontal_bone @@ -578948,14 +578422,14 @@ UBERON:0011627 orbital part of frontal bone - + - + FMA-abduced-lr @@ -578998,31 +578472,31 @@ - - + + EHDAA2:0001495 future premaxilla UBERON:0011628 early premaxilla - + - + - + ISBN:0073040584 - + EHDAA2 @@ -579033,19 +578507,19 @@ - + supratemporal UBERON:0011629 supratemporal bone - + - + temporal series ISBN:0073040584 @@ -579057,19 +578531,19 @@ - + intertemporal UBERON:0011630 intertemporal bone - + - + temporal series ISBN:0073040584 @@ -579081,19 +578555,19 @@ - + tabular UBERON:0011631 tabular bone - + - + temporal series ISBN:0073040584 @@ -579105,7 +578579,7 @@ - + A palatal bone which -- like many palatal bones -- may originally have developed as a dermal bone replacing part of the palatoquadrate, the primitive upper jaw. Like the palatine (also called dermopalatine), the ectopterygoid replaces the middle part of the autopalatine. It may be serially homologous with the palatine(s), but is somewhat specialized, being the last (most posterior in palatal view) of the series and bordering the fossa for the jaw muscles. In a typical tetrapod it abuts the palatine anteriorly, the maxilla laterally, the pterygoid or the fossa mandubuaris medially, and the fossa posteriorly. Dermal bone that forms the lateral border of the palate and articulates with the quadrate posteriorly, the entopterygoid medially and the dermopalatine and/or autopalatine antero-laterally. The ectopterygoid is a paired bone.[TAO] The ectopterygoid is often toothed.[TAO] @@ -579119,14 +578593,14 @@ ectopterygoid bone - + - + may be serially homologous with the palatines http://palaeos.com/vertebrates/bones/dermal/palatal-palatines.html @@ -579182,7 +578656,7 @@ - + The splenial is a small bone in the lower jaw of reptiles, amphibians and birds, usually located on the lingual side (closest to the tongue) between the angular and suprangular. AAO:0000573 Wikipedia:Splenial @@ -579191,7 +578665,7 @@ UBERON:0011635 splenial bone - + @@ -579204,7 +578678,7 @@ - + mandibular series ISBN:0073040584 @@ -579228,7 +578702,7 @@ - + @@ -579252,7 +578726,7 @@ UBERON:0011636 surangular bone - + @@ -579266,7 +578740,7 @@ - + mandibular series ISBN:0073040584 @@ -579342,7 +578816,7 @@ - + Osseous element of intramembranous origin that extends along the lingual margin of Meckel's cartilage. AAO:0000458 http://palaeos.com/vertebrates/bones/dermal/images/Dentary1.gif @@ -579350,7 +578824,7 @@ UBERON:0011637 prearticular bone - + @@ -579363,7 +578837,7 @@ - + mandibular series ISBN:0073040584 @@ -579406,7 +578880,7 @@ - + @@ -579429,7 +578903,7 @@ UBERON:0011639 frontoparietal bone - + @@ -579442,7 +578916,7 @@ - + orbital series ISBN:0073040584 @@ -579643,13 +579117,13 @@ - + An epithelium that develops_from a ectoderm and is part of a oral epithelium. EHDAA2:0004137 UBERON:0011642 oral epithelium from ectoderm - + @@ -579662,7 +579136,7 @@ - + EHDAA2 @@ -579679,7 +579153,7 @@ - + A single large dorsal limb rotator muscle in lower tetrapods that runs from the lumber region and girdle to the femur. 3 muscles differentiate from this: psoas, iliacus and pectineus. UBERON:0014843 @@ -579687,14 +579161,14 @@ UBERON:0011643 puboischiofemoralis internus muscle - + - + ISBN:0073040584 @@ -579905,9 +579379,9 @@ - - - + + + Hyoid muscle that originates at the ventrolateral margin of the pterotic and inserts in the dorsomesial edge of the opercle. The levator operculi is responible for jaw depression, its force of contraction is transmitted through the opercular series and the interoperculo-mandibular ligament to the lower jaw. The depressor mandibulae of tetrapods, which opens the jaws, is the homologue of the levator operculi and epihyoidean. In mammals, the depressor mandibulae evolves into the stapedius (...).[well established][VHOG] TAO:0000537 @@ -579917,15 +579391,15 @@ UBERON:0011649 levator operculi - + - + - + @@ -579938,19 +579412,19 @@ - + ISBN:0073040584 - + ISBN:0073040584 - + Kardong @@ -579982,37 +579456,37 @@ - + - + The depressor mandibulae of tetrapods, which opens the jaws, is the homologue of the levator operculi and epihyoidean. In mammals, the depressor mandibulae evolves into the stapedius (...).[well established][VHOG] UBERON:0011650 Muscle in sharks that is homologous to levator operculi and depressor mandibulae / stapedius epihyoidean - + - + - + ISBN:0073040584 - + ISBN:0073040584 @@ -580142,7 +579616,7 @@ - + @@ -580157,14 +579631,14 @@ UBERON:0011653 diapophysis of neural arch - + - + ISBN:0073040584 @@ -580698,20 +580172,20 @@ - + Enlarged section of perichordal tube that is arranged serially but out of phase with segmental musculature. AAO:0000738 UBERON:0011675 perichordal ring - + - + AAO @@ -580900,7 +580374,7 @@ - + @@ -580922,7 +580396,7 @@ adductor mandibulae - + @@ -580935,7 +580409,7 @@ - + ISBN:0073040584 @@ -580989,14 +580463,14 @@ - + A muscle derivative of the mandibular levator that runs from the chondrocranium to the palatoquadrate cartilage. Found in sharks. In some fishes such as the chimera and in tetrapods the palatoquadrate becomes fused to the braincase and this muscle is absent. UBERON:0011684 levator palatoquadrati - + @@ -581009,7 +580483,7 @@ - + ISBN:0073040584 @@ -581032,19 +580506,19 @@ - - + + A jaw muscle arises near the orbit and tapers as it passes posteriorly to its insertion on the adductor mandibulae. Found in sharks. preorbitalis UBERON:0011685 preorbitalis muscle - + - + @@ -581057,13 +580531,13 @@ - + ISBN:0073040584 - + ISBN:0073040584 @@ -581080,13 +580554,13 @@ - + spiracularis UBERON:0011686 spiracularis muscle - + @@ -581099,7 +580573,7 @@ - + ISBN:0073040584 @@ -581115,30 +580589,30 @@ - - + + levator hyomandibulae UBERON:0011687 levator hyomandibulae muscle - + - + - + ISBN:0073040584 - + ISBN:0073040584 @@ -581184,8 +580658,8 @@ - - + + Skeletal tissue that is hypermineralized and aprismatic and deposited by a combination of ameloblasts and odontoblasts that are excluded from the matrix. Enameloid develops from pre-enameloid tissue. VHOG:0001565 VSAO:0000113 @@ -581198,11 +580672,11 @@ UBERON:0011692 enameloid - + - + @@ -581215,13 +580689,13 @@ - + ZFA - + VSAO @@ -581271,18 +580745,18 @@ - - + + VHOG:0001157 extraembryonic umbilical artery UBERON:0011693 extraembryonic portion of umbilical artery - + - + @@ -581295,13 +580769,13 @@ - + EHDAA2-abduced - + FMA @@ -581434,7 +580908,7 @@ - + @@ -581449,14 +580923,14 @@ UBERON:0011698 midgut loop - + - + VHOG @@ -581496,7 +580970,7 @@ - + A hepatic sinusoid that is part of a caudate lobe of liver. EHDAA2:0001006 EHDAA:6992 @@ -581506,14 +580980,14 @@ UBERON:0011737 caudate lobe hepatic sinusoid - + - + EHDAA2 @@ -581552,7 +581026,7 @@ - + A hepatic sinusoid that is part of a quadrate lobe of liver. EHDAA2:0001013 EHDAA:8084 @@ -581562,14 +581036,14 @@ UBERON:0011738 quadrate lobe hepatic sinusoid - + - + EHDAA2 @@ -581633,7 +581107,7 @@ - + A cardiac valve leaflet that is part of a aortic valve. Extensive conservation of valve developmental mechanisms also has been observed among vertebrate species including chicken, mouse, and human.[uncertain][VHOG] EMAPA:18627 @@ -581643,14 +581117,14 @@ aortic valve leaflet - + - + MP @@ -582085,7 +581559,7 @@ - + compare with habenula The stalk emanates from the diencephalic roof at a left-of-medial position.[TAO] relationship loss: part_of pineal complex (TAO:0001359)[TAO] @@ -582103,14 +581577,14 @@ UBERON:0011768 pineal gland stalk - + - + EMAPA VHOG @@ -582350,7 +581824,7 @@ - + @@ -582383,14 +581857,14 @@ Alternate: leads from the utricle of the internal ear to the endolymphatic duct. - http://medical-dictionary.thefreedictionary.com/utriculosaccular+duct. We assume a 3-way connection utriculosaccular duct - + - + MP @@ -583736,7 +583210,7 @@ - + Superficial fascia is found in the subcutis in most regions of the body, blending with the reticular layer of the dermis. It is present on the face, over the upper portion of the sternocleidomastoid, at the nape of the neck, and overlying the sternum. It is comprised mainly of loose areolar connective tissue and adipose and is the layer that primarily determines the shape of a body. In addition to its subcutaneous presence, this type of fascia surrounds organs and glands, neurovascular bundles, and is found at many other locations where it fills otherwise unoccupied space. It serves as a storage medium of fat and water; as a passageway for lymph, nerve and blood vessels; and as a protective padding to cushion and insulate. Superficial fascia is present, but does not contain fat, in the eyelids, ear, scrotum, penis and clitoris. we follow FMA, BTO, NCIT and WP in making this a distinct class from hypodermis. BTO:0004525 @@ -583753,14 +583227,14 @@ superficial fascia - + - + FMA @@ -583990,12 +583464,6 @@ UBERON:0011822 dense irregular connective tissue - - - - - FMA - @@ -584754,7 +584222,7 @@ - + @@ -584789,14 +584257,14 @@ Alternate def: The internal acoustic meatus (or internal auditory meatus ) is an opening on the medial surface of the petrous temporal bone. It is through this passageway that the facial nerve (cranial nerve VII) and vestibulocochlear nerve (cranial nerve VIII) pass to reach their sites of innervation. The vestibulocochlear nerve divides at the internal acoustic meatus to continue as separate vestibular and cochlear components. [MURDOCH:908] internal acoustic meatus - + - + MP @@ -585494,7 +584962,7 @@ - + The oral part of the tongue anterior to the terminal sulcus. FMA:54641 @@ -585505,14 +584973,14 @@ body of tongue - + - + FMA @@ -585642,7 +585110,7 @@ - + A muscle layer that is part of a wall of esophagus. In the upper esophagus, part of the externa is skeletal muscle, rather than smooth muscle FMA:62998 @@ -585655,14 +585123,14 @@ UBERON:0011878 muscle layer of esophagus - + - + upper part Wikipedia:Muscular_layer @@ -585725,7 +585193,7 @@ - + The testes, at an early period of fetal life, are placed at the back part of the abdominal cavity, behind the peritoneum, and each is attached by a peritoneal fold, the mesorchium, to the mesonephros. AAO:0010530 EMAPA:17971 @@ -585735,7 +585203,7 @@ UBERON:0011879 mesorchium - + @@ -585748,7 +585216,7 @@ - + EMAPA @@ -585771,7 +585239,7 @@ - + @@ -585818,7 +585286,7 @@ anterior uvea - + @@ -585831,7 +585299,7 @@ - + MP @@ -586171,7 +585639,7 @@ - + @@ -586195,7 +585663,7 @@ UBERON:0011899 epimysium - + @@ -586208,7 +585676,7 @@ - + FMA @@ -586243,7 +585711,7 @@ - + The fibrous sheath enveloping each of the primary bundles of skeletal muscle fibers. FMA:9728 NCIT:C33299 @@ -586254,7 +585722,7 @@ UBERON:0011900 perimysium - + @@ -586267,7 +585735,7 @@ - + FMA @@ -586296,20 +585764,20 @@ - + FMA:70945 UBERON:0011901 The hair matrix surrounds the top and sides of the dermal papilla. The hair matrix cells give rise to 6 different types of cells that make up the different layers of the hair shaft and the inner root sheath. hair matrix - + - + FMA @@ -586398,7 +585866,7 @@ - + @@ -586424,14 +585892,14 @@ plantaris - + - + Lateral supracondylar ridge of femur above lateral head of gastrocnemius @@ -586519,7 +585987,7 @@ - + Missing definition for term UBERON:0011907. Please replace it using linked reference. @@ -586535,14 +586003,14 @@ Mammalian gastrocnemius medialis and flexor hallucis longus arise from reptilian gastrocnemius internus[Kardong] gastrocnemius medialis - + - + FMA @@ -586584,7 +586052,7 @@ - + Missing definition for term UBERON:0011908. Please replace it using linked reference. EMAPA:36249 @@ -586599,14 +586067,14 @@ Mammalian gastrocnemius lateralis, soleus and plantaris arise from reptilian gastrocnemius externus[Kardong] gastrocnemius lateralis - + - + FMA @@ -586799,7 +586267,7 @@ - + @@ -586817,7 +586285,7 @@ line of Schwalbe - + @@ -586830,7 +586298,7 @@ - + MP @@ -586894,7 +586362,7 @@ - + Masses of developing blood cells attached to endothelium in the yolk sac. EHDAA2:0000177 EMAPA:16115 @@ -586904,14 +586372,14 @@ yolk sac blood island - + - + EHDAA2 @@ -586941,8 +586409,8 @@ - - + + in EHDAA2 gives rise to connecting stalk blood vessels and extraembryonic umbilical vessels EHDAA2:0003242 blood island of umbilical vesicle @@ -586950,11 +586418,11 @@ UBERON:0011921 connecting stalk blood islands - + - + @@ -586967,13 +586435,13 @@ - + EHDAA2 - + EHDAA2 @@ -587479,7 +586947,7 @@ - + @@ -587511,14 +586979,14 @@ pilosebaceous unit - + - + ISBN:0123813611 @@ -587623,7 +587091,7 @@ - + A bulb of hair follicle that is part of a vibrissa unit. EMAPA:26716 MA:0000783 @@ -587634,14 +587102,14 @@ vibrissa hair bulb https://github.com/obophenotype/mouse-anatomy-ontology/issues/56 - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -587681,7 +587149,7 @@ - + A hair root sheath that is part of a vibrissa unit. EMAPA:26724 MA:0000784 @@ -587691,14 +587159,14 @@ UBERON:0011937 vibrissa root sheath - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -588081,7 +587549,7 @@ - + The inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective tissue; they are secretory epithelial cells characterized by the expression of the receptors for systemic hormones, i.e. estrogens, progesterone and prolactin. EMAPA:37902 FMA:74458 @@ -588089,14 +587557,14 @@ UBERON:0011950 mammary gland luminal epithelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -588136,21 +587604,21 @@ - + A luminal layer of epithelium that is part of a prostate gland. FMA:74262 subdivision of luminal layer of epithelium of prostatic gland UBERON:0011951 prostate luminal epithelium - + - + true https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships @@ -588396,7 +587864,7 @@ - + @@ -588427,7 +587895,7 @@ UBERON:0011958 acetabular labrum - + @@ -588440,7 +587908,7 @@ - + FMA @@ -588495,7 +587963,7 @@ - + A ring of fibrocartilage attached to the margin of the glenoid cavity of the scapula. consider classifying as 'annulus fibrosus' glenoid labrum @@ -588509,7 +587977,7 @@ UBERON:0011959 glenoid labrum of scapula - + @@ -588522,7 +587990,7 @@ - + FMA @@ -588750,7 +588218,7 @@ - + @@ -588766,14 +588234,14 @@ UBERON:0011963 talocalcaneonavicular joint - + - + FMA-modified @@ -588817,7 +588285,7 @@ - + @@ -588840,14 +588308,14 @@ UBERON:0011964 calcaneocuboid joint - + - + FMA-modified @@ -589020,7 +588488,7 @@ - + The facet of the tubercle of the rib forms an articulation with the adjacent transverse process of a thoracic vertebra. This is a plane type synovial joint called the costotransverse joint. This articulation is present in all but the eleventh and twelfth ribs. Ribs 1 to 10 have two joints in close proximity posteriorly; the costovertebral joints and the costotranseverse joints. This arrangement restrains the motion of the ribs allowing them to work in a parallel fashion during breathing. If a typical rib had only one joint posteriorly the resultant swivel action would allow a rib to be non-parallel with respect to the neighboring ribs making for a very inefficient respiratory mechanism. The ventral rami innervate the costotransverse joints. Therefore, therapeutic medial branch blocks are ineffectual. The ligaments of the joint are: Articular capsule Posterior costotransverse Anterior costotransverse Ligament of the neck of the rib Ligament of the tubercle of the rib. FMA:7952 SCTID:263328007 @@ -589029,7 +588497,7 @@ UBERON:0011967 costotransverse joint - + @@ -589042,7 +588510,7 @@ - + FMA @@ -590269,7 +589737,7 @@ - + A bronchiole that is part of a lower lobe of right lung. EHDAA2:0004094 EMAPA:19004 @@ -590281,14 +589749,14 @@ UBERON:0012059 right lung lower lobe bronchiole - + - + EHDAA2 @@ -590795,7 +590263,6 @@ - @@ -590818,16 +590285,6 @@ bony part of hard palate - - - - - - - - - FMA - @@ -591163,7 +590620,7 @@ - + @@ -591175,14 +590632,14 @@ UBERON:0012081 patella pre-cartilage condensation - + - + EMAPA @@ -591197,7 +590654,7 @@ - + @@ -591213,7 +590670,7 @@ UBERON:0012082 bronchial lumen - + @@ -591225,7 +590682,7 @@ - + FMA @@ -591794,7 +591251,7 @@ - + @@ -591819,14 +591276,14 @@ UBERON:0012108 postorbital bar - + - + orbital series @@ -592611,7 +592068,7 @@ - + Outermost point on an external nose or snout. EMAPA:37915 @@ -592628,14 +592085,14 @@ nose tip - + - + FMA @@ -593365,7 +592822,7 @@ - + A subdivision of the manus skeleton consisting of both manual acropodial skeleton and metacarpal skeleton, but excluding the carpal skeleton. some sources call this the acropodium. see https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod manual digitopodium @@ -593373,14 +592830,14 @@ skeleton of manual digitopodium https://github.com/obophenotype/uberon/wiki/Subdivisions-of-the-autopod - + - + FMA @@ -593555,7 +593012,7 @@ - + BAMS:ACBc BAMS:AcbC DHBA:10340 @@ -593574,14 +593031,14 @@ core of nucleus accumbens - + - + NIFSTD @@ -593627,7 +593084,7 @@ - + Crescent shaped outer zone of the nucleus accumbens, defined by a combination of chemoarchitecture and afferent and efferent connections. The shell is distinguished from the more centrally located core through the notable reduction in staining for the calcium-binding protein calbindin D28K, which is dense in the core and virtually absent in the shell. BAMS:ACBs BAMS:AcbSh @@ -593646,14 +593103,14 @@ shell of nucleus accumbens - + - + NIFSTD @@ -593832,8 +593289,8 @@ - - + + EHDAA2:0000494 EMAPA:16794 SCTID:361514006 @@ -593845,11 +593302,11 @@ UBERON:0012175 acoustico-facial VII-VIII ganglion complex - + - + @@ -593862,13 +593319,13 @@ - + EHDAA2 - + cjm @@ -594664,7 +594121,7 @@ - + @@ -594691,7 +594148,7 @@ urinary bladder vasculature - + @@ -594703,7 +594160,7 @@ - + EMAPA @@ -595082,7 +594539,7 @@ - + @@ -595110,14 +594567,14 @@ UBERON:0012243 nuptial pad - + - + ISBN:0073040584 @@ -595151,19 +594608,19 @@ - + A temporary layer between old and new skin that is invalided by white blood cells[Kardong]. UBERON:0012244 stratum intermedium of epidermis - + - + ISBN:0073040584 @@ -595820,8 +595277,8 @@ - - + + A manual digit found in Aves that is the most preaxial position and is morphologically similar to digit 1 in the standard tetrapod configuration and develops from embryonic digit 2, with contributions from embryonic digit 1. alula alula (Aves) @@ -595834,24 +595291,24 @@ Hypothesized to be homologous to manual digit 1 of other tetrapods. Develops from the embryonic digit that is positionally the 2nd, with contributions from the 1st alular digit - + - + - + PMID:10220427 - + PMID:10220427 @@ -595887,7 +595344,7 @@ - + A manual digit found in Aves that is morphologically similar to digit 2 in the standard tetrapod configuration and develops from embryonic digit 3. digit II of manus digit II(CIII) of manus @@ -595899,14 +595356,14 @@ Hypothesized to be homologous to manual digit 2 of other tetrapods manual major digit (Aves) - + - + PMID:10220427 @@ -595946,7 +595403,7 @@ - + A manual digit found in Aves that is morphologically similar to digit 3 in the standard tetrapod configuration and develops from embryonic digit 4. digit III of manus digit III(CIV) of manus @@ -595958,14 +595415,14 @@ Hypothesized to be homologous to manual digit 3 of other tetrapods manual minor digit (Aves) - + - + PMID:10220427 @@ -596762,7 +596219,7 @@ - + One of two hemispheres of the embryo at the zygote or blastula stage[WP,modified]. Like many of the early_development classes in this ontology, this class requires review for its applicability across vertebrates. See the tracker item for further discussion. @@ -596775,14 +596232,14 @@ hemisphere of embryo https://upload.wikimedia.org/wikipedia/commons/5/5e/Oocyte_Poles.jpg - + - + XAO @@ -596823,7 +596280,7 @@ - + @@ -596837,14 +596294,14 @@ UBERON:0012287 Rathkes pouch epithelium - + - + EHDAA2 @@ -597114,7 +596571,7 @@ - + @@ -597128,14 +596585,14 @@ We presume this is distinct from AAO:0001003, an external integumentary structure - check with amphibian anatomy ontology developers. AO notes: the text def states mesenchymal swelling, EHDAA2 splits into mesenchymal and epithelial parts embryonic cloacal fold - + - + EHDAA2 @@ -597164,14 +596621,14 @@ - + A slight elevation flanking the cloacal membrane and derived from a cloacal fold; anal folds form the border of the anus. EHDAA2:0004012 EMAPA:37392 UBERON:0012293 anal fold - + @@ -597184,7 +596641,7 @@ - + EHDAA2 @@ -597413,7 +596870,7 @@ - + @@ -597431,14 +596888,14 @@ male urethral crest - + - + cjm @@ -597492,7 +596949,7 @@ - + @@ -597509,14 +596966,14 @@ female urethral crest - + - + cjm @@ -598133,14 +597590,14 @@ - + EHDAA2:0004599 EMAPA:17637 FMA:312685 UBERON:0012312 maxillary process ectoderm - + @@ -598153,7 +597610,7 @@ - + EHDAA2 @@ -598165,24 +597622,24 @@ - - - + + + EHDAA2:0000039 EMAPA:16389 ectoderm of maxillary component UBERON:0012313 1st arch maxillary ectoderm - + - + - + @@ -598195,19 +597652,19 @@ - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -598333,7 +597790,7 @@ - + @@ -598376,14 +597833,14 @@ UBERON:0012316 primitive palate - + - + palatal series ISBN:0073040584 @@ -598711,7 +598168,7 @@ - + The deep cervical artery (Profunda cervicalis) is an artery of the neck. FMA:10659 @@ -598722,14 +598179,14 @@ deep cervical artery - + - + FMA @@ -598751,7 +598208,7 @@ - + The ascending cervical artery is a small branch which arises from the inferior thyroid artery as that vessel is passing behind the carotid sheath; it runs up on the anterior tubercles of the transverse processes of the cervical vertebrC& in the interval between the Scalenus anterior and Longus capitis. To the muscles of the neck it gives twigs which anastomose with branches of the vertebral, and it sends one or two spinal branches into the vertebral canal through the intervertebral foramina to be distributed to the medulla spinalis and its membranes, and to the bodies of the vertebrC&, in the same manner as the spinal branches from the vertebral. It anastomoses with the ascending pharyngeal and occipital arteries. FMA:52489 @@ -598762,14 +598219,14 @@ ascending cervical artery - + - + FMA Wikipedia @@ -598946,7 +598403,7 @@ - + Small saliences on the ridge of the glans of the male genital organs. FMA:19653 @@ -598957,14 +598414,14 @@ UBERON:0012327 pearly penile papule - + - + FMA @@ -599375,7 +598832,7 @@ - + @@ -599391,14 +598848,14 @@ UBERON:0012336 perianal skin - + - + MA @@ -599420,7 +598877,7 @@ - + The cauda equina is a structure within the lower end of the spinal column of most vertebrates, that consists of nerve roots and rootlets from above. The space in which the cerebrospinal fluid is present is actually an extension of the subarachnoid space. EMAPA:37468 FMA:52590 @@ -599435,14 +598892,14 @@ UBERON:0012337 cauda equina - + - + MESH @@ -600136,19 +599593,19 @@ - + EHDAA2:0004588 UBERON:0012361 internal anal region - + - + EHDAA2 @@ -600303,7 +599760,7 @@ - + A muscle layer that is part of an intestine. FMA:15697 intestinal muscularis propria @@ -600312,14 +599769,14 @@ UBERON:0012367 muscle layer of intestine - + - + FMA @@ -600714,7 +600171,7 @@ - + @@ -600738,14 +600195,14 @@ muscle layer of urinary bladder - + - + FMA @@ -600930,7 +600387,7 @@ - + A circular muscle layer of muscular coat that is part of a small intestine smooth muscle. EMAPA:37562 FMA:14935 @@ -600947,14 +600404,14 @@ UBERON:0012401 small intestine smooth muscle circular layer - + - + FMA @@ -601043,7 +600500,7 @@ - + A longitudinal muscle layer of muscular coat that is part of a small intestine smooth muscle. EMAPA:37563 FMA:14936 @@ -601060,14 +600517,14 @@ UBERON:0012402 small intestine smooth muscle longitudinal layer - + - + FMA @@ -601221,7 +600678,7 @@ - + The taeniae coli (also teniae coli) are three separate longitudinal ribbons of smooth muscle on the outside of the ascending, transverse, descending and sigmoid colons. They are visible, and can be seen just below the serosa or fibrosa. They are the Mesocolic, Free and Omental Coli. The teniae coli contracts length wise to produce the haustra, the bulges in the colon. The bands converge at the root of the vermiform appendix and the rectum. These bands correspond to the outer layer of the muscularis externa, in other portions of the digestive tract. FMA:15041 @@ -601236,14 +600693,14 @@ taenia coli - + - + FMA @@ -601668,7 +601125,7 @@ - + @@ -601689,7 +601146,7 @@ UBERON:0012429 hematopoietic tissue - + @@ -601702,7 +601159,7 @@ - + defitional @@ -602760,7 +602217,7 @@ - + @@ -602776,14 +602233,14 @@ UBERON:0012463 cloacal lumen - + - + cjm @@ -603015,19 +602472,19 @@ - + EHDAA2:0004589 UBERON:0012469 external anal region - + - + EHDAA2 @@ -603057,7 +602514,7 @@ - + @@ -603089,14 +602546,14 @@ UBERON:0012471 hepatogastric ligament - + - + FMA @@ -603133,7 +602590,7 @@ - + @@ -603156,14 +602613,14 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.2/assets/3d-vh-f-liver.glb https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb - + - + FMA @@ -603259,7 +602716,7 @@ - + @@ -603274,14 +602731,14 @@ UBERON:0012474 hepatic cecum - + - + BTO @@ -603471,8 +602928,8 @@ - - + + The posterior region of the neck, including the suboccipital region. nuchal nape @@ -603494,11 +602951,11 @@ dorsal part of neck - + - + @@ -603511,13 +602968,13 @@ - + FMA - + FMA @@ -604146,7 +603603,7 @@ - + A muscularis mucosa that is part of a duodenum. EMAPA:27243 @@ -604161,14 +603618,14 @@ muscularis mucosae of duodenum - + - + FMA @@ -604202,7 +603659,7 @@ - + A muscularis mucosa that is part of a rectum. EMAPA:27093 FMA:15687 @@ -604212,14 +603669,14 @@ UBERON:0012497 muscularis mucosae of rectum - + - + FMA @@ -604410,7 +603867,7 @@ - + A serous membrane that is part of a fundus of stomach. EMAPA:27157 FMA:17073 @@ -604418,14 +603875,14 @@ UBERON:0012503 serosa of fundus of stomach - + - + FMA @@ -604791,7 +604248,7 @@ - + The ampulla is the second portion of the uterine tube. It is an intermediate dilated portion, which curves over the ovary. It is the most common site of human fertilization. The word ampulla is from the Latin for flask. BTO:0004285 @@ -604809,14 +604266,14 @@ ampulla of fallopian tube - + - + FMA @@ -606130,7 +605587,7 @@ - + Just before each crus of the penis meets its fellow it presents a slight enlargement, named by Kobelt the bulb of the corpus spongiosum penis. It is homologous to the vestibular bulbs in females. FMA:19614 Wikipedia:Bulb_of_penis @@ -606145,14 +605602,14 @@ UBERON:0013128 bulb of penis - + - + FMA @@ -606313,9 +605770,9 @@ - - - + + + One of the small straight arteries of the red pulp of the spleen; a branch of the spleen central artery that supplies the red pulp[WP,modified]. FMA:16038 @@ -606326,34 +605783,34 @@ penicillar arteriole - + - + - + - + FMA - + Wikipedia:Trabecular_arteries - + Wikipedia:Trabecular_arteries @@ -606390,7 +605847,7 @@ - + A phrenic artery that arises from the lower part of the thoracic aorta and is distributed to the posterior part of the upper surface of the diaphragm, and anastomoses with the musculophrenic and pericardiacophrenic arteries. FMA:4163 @@ -606403,14 +605860,14 @@ superior phrenic artery - + - + Wikipedia @@ -606517,7 +605974,7 @@ - + @@ -606533,14 +605990,14 @@ UBERON:0013136 vein of lip - + - + FMA @@ -606617,8 +606074,8 @@ - - + + @@ -606640,24 +606097,24 @@ https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.2/assets/3d-vh-f-liver.glb https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.2/assets/3d-vh-m-liver.glb - + - + - + FMA - + FMA-modified @@ -606809,7 +606266,7 @@ - + @@ -606826,7 +606283,7 @@ UBERON:0013141 capillary bed - + @@ -606839,7 +606296,7 @@ - + FMA @@ -606972,7 +606429,7 @@ - + FMA:44559 genicular vein @@ -606981,14 +606438,14 @@ The term genicular venous plexus (plexus venosus genicularis) should replace the term genicular veins. At the knee, deep veins do not correspond exactly to the branches of the popliteal artery (articular arteries). They are arranged in a complex plexus of interconnecting veins.[http://www.veinsurg.com/fr/biblio/echodoppler/echodoppler_11.php] vein of genicular venous plexus - + - + FMA @@ -607004,21 +606461,21 @@ - + FMA:44320 SCTID:302677006 posteromedial vein of thigh UBERON:0013145 accessory saphenous vein - + - + FMA @@ -607034,8 +606491,8 @@ - - + + Missing definition for term UBERON:0013146. Please replace it using linked reference. EHDAA2:0000185 EMAPA:18631 @@ -607046,11 +606503,11 @@ UBERON:0013146 venous system of brain - + - + @@ -607063,13 +606520,13 @@ - + EHDAA2 - + VHOG-modified @@ -607092,21 +606549,21 @@ - + EHDAA2:0001102 mesencephalic vesicle UBERON:0013147 gives rise to midbrain vesicle which gives rise to cerebral aqueduct early mesencephalic vesicle - + - + EHDAA2 @@ -607122,8 +606579,8 @@ - - + + EHDAA2:0001103 SCTID:361481005 midbrain vesicle @@ -607131,24 +606588,24 @@ develops into cerebral aqueduct early midbrain vesicle - + - + - + EHDAA2 - + EHDAA2 @@ -607164,7 +606621,7 @@ - + EHDAA2:0000101 SCTID:361482003 rhombencephalic vesicle @@ -607172,14 +606629,14 @@ gives rise of 4th ventricle hindbrain vesicle - + - + EHDAA2 @@ -607195,7 +606652,7 @@ - + @@ -607215,14 +606672,14 @@ UBERON:0013150 future brain vesicle - + - + EHDAA2 @@ -607289,7 +606746,7 @@ - + A temporary opening between the developing ventricles of the heart. The ventricles arise as a single cavity is divided by the developing interventricular septum. Before the septum closes completely, the remaining opening between the two ventricles is termed the interventricular foramen. EHDAA2:0004064 Wikipedia:Primary_interventricular_foramen @@ -607299,7 +606756,7 @@ Phenotype notes: In some individuals, the foramen fails to close, leading to an interventricular septal defect known as a patent interventricular foramen interventricular foramen of heart - + @@ -607312,7 +606769,7 @@ - + EHDAA2 @@ -607334,7 +606791,7 @@ - + Small protrusions of the arachnoid mater into vascular sinuses, acting as one-way pressure-sensitive valves. Arachnoid granulations (or arachnoid villi) are small protrusions of the arachnoid (the thin second layer covering the brain) through the dura mater (the thick outer layer). They protrude into the venous sinuses of the brain, and allow cerebrospinal fluid (CSF) to exit the brain, and enter the blood stream. Largest granulations lie along the superior sagittal sinus, a large venous space running from front to back along the centre of the head (on the inside of the skull). They are, however, present along other dural sinuses as well. Smaller granulations are called villi, large calcified ones are referred to as pacchionian bodies[Wikipedia:Arachnoid_granulation]. FMA:83980 @@ -607355,14 +606812,14 @@ UBERON:0013153 arachnoid villus - + - + FMA @@ -607459,43 +606916,43 @@ - - - + + + EHDAA2:0000040 EMAPA:16390 endoderm of maxillary component UBERON:0013154 1st arch maxillary endoderm - + - + - + - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -607513,24 +606970,24 @@ - - - + + + EHDAA2:0000032 EMAPA:16383 ectoderm of mandibular component UBERON:0013155 1st arch mandibular ectoderm - + - + - + @@ -607543,19 +607000,19 @@ - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -607572,43 +607029,43 @@ - - - + + + EHDAA2:0000033 EMAPA:16384 endoderm of mandibular component UBERON:0013156 1st arch mandibular endoderm - + - + - + - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -607624,7 +607081,7 @@ - + EHDAA2:0000046 EMAPA:16395 1st arch maxillary-mandibular groove ectoderm @@ -607632,14 +607089,14 @@ UBERON:0013157 1st arch maxillary-mandibular cleft - + - + EHDAA2 @@ -607800,7 +607257,7 @@ - + @@ -607815,14 +607272,14 @@ UBERON:0013161 left lateral ventricle - + - + FMA @@ -607850,7 +607307,7 @@ - + @@ -607865,14 +607322,14 @@ UBERON:0013162 right lateral ventricle - + - + FMA @@ -608545,7 +608002,7 @@ - + @@ -608567,14 +608024,14 @@ phonic lip http://upload.wikimedia.org/wikipedia/commons/a/a5/Delphinschaedel.svg - + - + check for sperm whales @@ -608598,7 +608055,7 @@ - + @@ -608611,14 +608068,14 @@ dorsal bursa http://upload.wikimedia.org/wikipedia/commons/a/a5/Delphinschaedel.svg - + - + check for sperm whales @@ -608758,21 +608215,21 @@ - + A structure consisting of a pair of anterior and posterior dorsal bursae in which a pair of phonic lips are embedded, along with the bursal cartilage and a blowhole ligament. all odontocetes except sperm whales posses two bilaterally placed MLDB complexes, placed just below the floor of the vestibular sac MLDB complex UBERON:0013188 monkey lips dorsal bursa complex - + - + ISBN:0120885522 @@ -609069,7 +608526,7 @@ - + A strand of pelage hair that is crimped and grows in clusters. MESH:D014935 @@ -609080,14 +608537,14 @@ UBERON:0013196 strand of wool - + - + cjm @@ -609748,7 +609205,7 @@ - + @@ -609763,14 +609220,14 @@ UBERON:0013216 udder - + - + 1 @@ -609893,21 +609350,21 @@ - + The parotoid gland (alternatively, paratoid gland) is an external skin gland on the back, neck, and shoulder of toads and some frogs and salamanders. It secretes a milky alkaloid substance to deter predators. The substance produced acts as a neurotoxin. Parotoid glands are sometimes said to be wart-like in appearance, though warts are abnormal growths caused by viral infections while parotoid glands are normal, healthy parts of the animals that bear them. The vague similarity in appearance, however, is the reason behind the mistaken belief that touching a toad causes warts. Wikipedia:Parotoid_gland paratoid gland UBERON:0013219 parotoid gland - + - + Wikipedia @@ -609929,7 +609386,7 @@ - + @@ -609949,14 +609406,14 @@ UBERON:0013220 foramen of Panizza - + - + Wikipedia @@ -610729,28 +610186,26 @@ - + + + + - + + + + + + A future glans that is part of a male genital tubercle. EMAPA:29252 glans of male genital tubercle UBERON:0013239 future glans penis - - - - - - - - - EMAPA - @@ -610767,28 +610222,26 @@ - + + + + - + + + + + + A future glans that is part of a female genital tubercle. EMAPA:19170 glans of female genital tubercle UBERON:0013240 future glans clitoris - - - - - - - - - EMAPA - @@ -610802,7 +610255,7 @@ - + The precursor of the urethra. In humans, the urethral groove is a temporary linear indentation on the underside (ventral side) of the male penis during embryonic development. It typically appears around 8 weeks of gestation and becomes closed into a normal male urethra by the 12th week SCTID:361531004 @@ -610813,14 +610266,14 @@ UBERON:0013241 embryonic urethral groove - + - + Wikipedia @@ -610921,16 +610374,32 @@ - - + + + + + + + + - - + + + + + + + + + + + + An epithelial tube that develops from a Mullerian duct in a male. Later degenerates. consider separating the duct from the degenerating portion, as in EMAPA EHDAA2:0001052 @@ -610940,26 +610409,6 @@ UBERON:0013247 male paramesonephric duct - - - - - - - - - - - - - EHDAA2 - - - - - - EHDAA2 - @@ -610986,7 +610435,7 @@ - + A small collection of convoluted tubules, situated in front of the lower part of the cord above the head of the epididymis. These tubes are lined with columnar ciliated epithelium, and probably represent the remains of a part of the Wolffian body but are functionless and vestigial. The Wolffian body operates as a kidney (metanephros) in fishes and amphibians, but the corresponding tissue is co-opted to form parts of the male reproductive system in other classes of vertebrate. The paradidymis represents a remnant of an unused, atrophied part of the Wolffian body[WP,modified]. FMA:74055 SCTID:279643005 @@ -610997,14 +610446,14 @@ UBERON:0013248 paradidymis - + - + Wikipedia @@ -611040,7 +610489,7 @@ - + A collection of a few scattered rudimentary tubules child, situated in the broad ligament between the epoophoron and the uterus. FMA:18692 Wikipedia:Paroophoron @@ -611050,7 +610499,7 @@ UBERON:0013249 paroophoron - + @@ -611063,7 +610512,7 @@ - + Wikipedia @@ -611104,7 +610553,7 @@ - + In connection with the fimbriae of the uterine tube, or with the broad ligament close to them, there are frequently one or more small pedunculated vesicles. These are termed the vesicular appendages of the epoophoron. one of the small pedunculated structures attached to the uterine tubes near their fimbriated end; remnants of the mesonephric ducts[http://medical-dictionary.thefreedictionary.com/]. hydatid of Morgagni @@ -611123,7 +610572,7 @@ UBERON:0013250 vesicular appendage of epoophoron - + @@ -611136,7 +610585,7 @@ - + cranial end Wikipedia @@ -611203,7 +610652,7 @@ - + Remnant in a female of the portion of the embryonic mesonephric duct that develops into the ductus deferens in males. FMA:76609 ductus deferens vestige @@ -611212,7 +610661,7 @@ UBERON:0013262 remnnant of ductus deferens - + @@ -611225,7 +610674,7 @@ - + Wikipedia @@ -611636,7 +611085,7 @@ - + @@ -611655,14 +611104,14 @@ UBERON:0013399 blood vessel layer of choroid - + - + FMA @@ -611722,7 +611171,7 @@ - + The asterion is the point on the skull corresponding to the posterior end of the parietomastoid suture. FMA:76625 Wikipedia:Asterion_(anatomy) @@ -611731,7 +611180,7 @@ asterion of skull http://upload.wikimedia.org/wikipedia/commons/5/56/Asterion.PNG - + @@ -611744,7 +611193,7 @@ - + Wikipedia @@ -611766,7 +611215,7 @@ - + @@ -611787,7 +611236,7 @@ bregma http://upload.wikimedia.org/wikipedia/commons/2/24/Kort-lang-skalle.gif - + @@ -611800,7 +611249,7 @@ - + Wikipedia @@ -611900,20 +611349,20 @@ - + The crotaphion refers to two points on the skull at the tips of the greater wing of sphenoid bone. It is near the pterion. Wikipedia:Crotaphion UBERON:0013412 crotaphion - + - + Wikipedia @@ -611935,7 +611384,7 @@ - + The Epicranium is the medical term for the collection of structures covering the cranium. It consists of the muscles, aponeurosis, and skin. TODO - add parts SCTID:362625008 @@ -611943,14 +611392,14 @@ UBERON:0013417 epicranium - + - + Wikipedia @@ -611992,7 +611441,7 @@ - + The infratemporal fossa is an irregularly shaped cavity, situated below and medial to the zygomatic arch. Boundaries defined by: anteriorly, by the infratemporal surface of the maxilla and the ridge which descends from its zygomatic process posteriorly, by the articular tubercle of the temporal and the spinal angularis of the sphenoid superiorly, by the greater wing of the sphenoid below the infratemporal crest, and by the under surface of the temporal squama, containing the foramen ovale, which transmits the mandibular branch of the trigeminal nerve, and the foramen spinosum, which transmits the middle meningeal artery inferiorly, by the medial pterygoid muscle attaching to the mandible medially, by the lateral pterygoid plate laterally, by the ramus of mandible, which contains the mandibular foramen, leading to the mandibular canal through which the inferior alveolar nerve passes. This also contains the lingula, a triangular piece of bone that overlies the mandibular foramen antero-medially. Finally, the mylohyoid groove descends obliquely transmitting the mylohyoid nerve the only motor branch of the anterior division of the trigeminal nerve. FMA:75308 MESH:D000080884 @@ -612005,14 +611454,14 @@ infratemporal fossa http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png - + - + Wikipedia @@ -612053,20 +611502,20 @@ - + The jugal point is the point at the anterior end of the upper border of the zygomatic arch where the masseteric and maxillary edges meet at an angle. Wikipedia:Jugal_point UBERON:0013423 jugal point - + - + Wikipedia @@ -612097,7 +611546,7 @@ - + @@ -612119,14 +611568,14 @@ anatomical point connecting sagittal and lambdoidal sutures http://upload.wikimedia.org/wikipedia/commons/5/50/Gray1193.svg - + - + Wikipedia @@ -612154,21 +611603,21 @@ - + The point of the sagittal suture which is on a level with the parietal foramina. FMA:264774 Wikipedia:Obelion UBERON:0013426 obelion - + - + Wikipedia @@ -612218,21 +611667,21 @@ - + The ophryon is the point in the forehead just above the optic foramen, or eyesocket, and glabella. FMA:284930 Wikipedia:Ophryon UBERON:0013428 ophryon - + - + Wikipedia @@ -612248,7 +611697,7 @@ - + The porion is the point on the human skull located at the upper margin of each ear canal (external auditory meatus, external acoustic meatus). It underlies the tragus. The anatomical landmark has significance in biological anthropology and craniometry. FMA:264711 Wikipedia:Porion @@ -612256,14 +611705,14 @@ porion http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png - + - + Wikipedia @@ -612303,7 +611752,7 @@ - + The pterygomaxillary fissure is a fissure of the human skull. It is vertical, and descends at right angles from the medial end of the inferior orbital fissure; it is a triangular interval, formed by the divergence of the maxilla from the pterygoid process of the sphenoid. It connects the infratemporal with the pterygopalatine fossa, and transmits the terminal part of the maxillary artery. Alveolar branches of the maxillary nerve go from the pterygopalatine fossa to the infratemporal region via this fissure. In older texts, the pterygomaxillary fissure is sometimes called the pterygopalatine fissure. FMA:76627 Wikipedia:Pterygomaxillary_fissure @@ -612311,7 +611760,7 @@ pterygomaxillary fissure http://upload.wikimedia.org/wikipedia/commons/a/a7/Gray189.png - + @@ -612324,7 +611773,7 @@ - + Wikipedia @@ -612441,7 +611890,7 @@ - + The speno-maxillary fossa is a small triangular space situated at the angle of the junction of the spheno-maxillary and pterygo-maxillary fissures, and placed beneath the apex of the orbit. It is formed above by the under surface of the body of the sphenoid and by the orbital process of the palate bone. NCIT:C33584 UMLS:C1519450 @@ -612449,14 +611898,14 @@ UBERON:0013454 spheno-maxillary fossa - + - + Wikipedia @@ -612493,7 +611942,7 @@ - + @@ -612515,14 +611964,14 @@ spheno-petrosal fissure http://upload.wikimedia.org/wikipedia/commons/8/81/Gray193.png - + - + Wikipedia @@ -612550,7 +611999,7 @@ - + The point where the upper temporal line cuts the coronal suture is named the stephanion. FMA:264723 Wikipedia:Stephanion @@ -612558,14 +612007,14 @@ stephanion https://upload.wikimedia.org/wikipedia/commons/a/ae/Gray188-Coronal_suture.png - + - + Wikipedia @@ -612581,7 +612030,7 @@ - + The suprainiac fossa is an elliptic depression on the occiput above the superior nuchal line, or inion. UBERON:0013470 @@ -612589,14 +612038,14 @@ UBERON:0013460 suprainiac fossa - + - + Wikipedia @@ -612664,7 +612113,7 @@ - + The temporal fossa is a shallow depression on the side of the skull bounded by the temporal lines and terminating below the level of the zygomatic arch. FMA:75307 NCIT:C33742 @@ -612675,14 +612124,14 @@ temporal fossa http://upload.wikimedia.org/wikipedia/commons/b/bd/Fossatemporalis.PNG - + - + Wikipedia @@ -612747,7 +612196,7 @@ - + Near the middle of the occipital squama is the external occipital protuberance, and extending lateralward from it on either side is the superior nuchal line, and above this the faintly marked highest nuchal line. It is less pronounced in females. The inion is the highest point of the external occipital protuberance. a projection on the external surface of the squamous part of the occipital bone in the midline. The external occipital protuberance is a bony prominence occuring on the large area ventral to the external sagittal crest. It functions as the attachment site for the funicular part of the nuchal ligament[MURDOCH:734]. FMA:75752 @@ -612758,14 +612207,14 @@ external occipital protuberance https://github.com/obophenotype/uberon/issues/166 - + - + FMA @@ -613169,7 +612618,7 @@ - + An intestinal crypt that is located in the ileum. EMAPA:37839 FMA:269061 @@ -613180,14 +612629,14 @@ crypt of Lieberkuhn of ileum - + - + FMA @@ -613220,7 +612669,7 @@ - + An intestinal crypt that is located in the duodenum. EMAPA:37838 FMA:269063 @@ -613230,14 +612679,14 @@ crypt of Lieberkuhn of duodenum - + - + FMA @@ -613270,7 +612719,7 @@ - + An intestinal crypt that is located in the jejunum. EMAPA:37840 FMA:269065 @@ -613280,14 +612729,14 @@ crypt of Lieberkuhn of jejunum - + - + FMA @@ -613467,7 +612916,7 @@ - + @@ -613492,14 +612941,14 @@ It is considered by some to be a part of the Panniculus adiposus, and not true fascia[WP] superficial cervical fascia - + - + contested Wikipedia @@ -613909,20 +613358,20 @@ - + EMAPA:16662 glossopharyngeal-vagus preganglion complex UBERON:0013499 glossopharyngeal-vagus IX-X preganglion complex - + - + cjm @@ -614564,12 +614013,6 @@ - - - - - - @@ -614715,12 +614158,6 @@ - - - - - - @@ -614778,7 +614215,7 @@ - + One of two lateral tracts connecting a uterus to a common median tract separated from the median vagina via ureters which prevent their fusion. Found in marsupials. https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern lateral vagina @@ -614786,14 +614223,14 @@ UBERON:0013523 lateral vaginal canal - + - + the lateral vaginae serve as transport for the sperm @@ -614830,7 +614267,6 @@ - @@ -614843,12 +614279,6 @@ - - - - - - A median canal in the reproductive system of marsupials that connects the uteri to a common tract, joining with the two lateral vaginas. Connects the uterine openings directly with the urogenital sinus. central pseudovaginal canal central vagina @@ -614882,7 +614312,7 @@ - + @@ -614898,14 +614328,14 @@ UBERON:0013525 stomach lumen - + - + FMA @@ -614951,7 +614381,7 @@ - + @@ -614965,7 +614395,7 @@ UBERON:0013526 otocyst lumen - + @@ -614978,7 +614408,7 @@ - + EHDAA2 @@ -615165,7 +614595,7 @@ - + A segmentation of the cerebral cortex on the basis of cytoarchitecture as described in Brodmann-1905, Brodmann-1909 and Brodmann-10. Maps for several species were presented. NeuroNames includes only areas in the human and in Old World monkeys. Of the latter, Brodmann studied representatives of several species including guenons (one Cercopithecus mona, one Cercocebus torquatus, and one Cercopithecus otherwise unspecified), which are all closely related African species, and one macaque (Macaca mulatta) an Asian species (Brodmann-1905). The legend to the summary map in Brodmann-1909 ascribes the areas simply to Cercopithecus. Brodmann referenced the areas by name and number. The same area number in humans and monkeys did not necessarily refer to topologically or cytoarchitecturally homologous structures. In NeuroNames the standard term for human areas consists of the English translation of Brodmann's Latin name followed by the number he assigned, e.g., agranular frontal area 6; the standard terms for monkey areas are in the format: area 6 of Brodmann-1909. He mapped a portion of areas limited to the banks of sulci, e.g., area 3 of Brodmann-1909 (Brodmann-1909) onto the adjacent, visible surface. This accounts for the fact that some areas appear larger on his surface map than on maps of other authors, e.g., area 3 of Vogts-1919. (Adapted from NeuroNames). BAMS:VTM BIRNLEX:1731 @@ -615181,14 +614611,14 @@ UBERON:0013529 Brodmann area - + - + FMA Wikipedia @@ -615240,7 +614670,7 @@ - + The retrosplenial region is a brain area and part of the cingulate cortex. It is defined by Brodmann area 26, Brodmann area 29 and the Brodmann area 30. BAMS:RSP BTO:0003977 @@ -615256,14 +614686,14 @@ retrosplenial region - + - + BTO @@ -615418,7 +614848,7 @@ - + The term area 4 of Brodmann-1909 refers to a cytoarchitecturally defined portion of the frontal lobe of the guenon. It is located predominantly in the precentral gyrus. Brodmann-1909 regarded it as topographically and cytoarchitecturally homologous to the human gigantopyramidal area 4 and noted that it occupies a much greater fraction of the frontal lobe in the monkey than in the human. Distinctive features (Brodmann-1905): the cortex is unusually thick; the layers are not distinct; the cells are relatively sparsely distributed; giant pyramidal (Betz) cells are present in the internal pyramidal layer (V); lack of an internal granular layer (IV) such that the boundary between the external pyramidal layer (III) and the internal pyramidal layer (V) is indistinct; lack of a distinct external granular layer (II); a gradual transition from the multiform layer (VI) to the subcortical white matter. B09-4 BIRNLEX:1735 @@ -615441,7 +614871,7 @@ Brodmann (1909) area 4 https://github.com/obophenotype/uberon/issues/515 - + @@ -615454,7 +614884,7 @@ - + https://github.com/obophenotype/uberon/issues/515 @@ -615815,7 +615245,7 @@ - + Brodmann area 9, or BA9, refers to a cytoarchitecturally defined portion of the frontal cortex in the brain of humans and other primates. It contributes to the dorsolateral and medial prefrontal cortex and plays a role in executive functions such as working memory, planning, inhibition, decision-making, and reasoning. Its cytoarchitecture is referred to as granular due to the concentration of granule cells in layer IV. Its internal pyramidal layer (V) is divisible into two sublayers, an outer layer 5a of densely distributed medium-size ganglion cells that partially merges with layer IV, and an inner, clearer, cell-poor layer 5b; the pyramidal cells of sublayer 3b of the external pyramidal layer (III) are smaller and sparser in distribution; the external granular layer (II) is narrow, with small numbers of sparsely distributed granule cells. B09-9 BIRNLEX:1740 @@ -615837,7 +615267,7 @@ UBERON:0013540 Brodmann (1909) area 9 - + @@ -615850,7 +615280,7 @@ - + https://orcid.org/0000-0003-3308-6245 @@ -616311,7 +615741,7 @@ - + Brodmann Area 14 is one of Brodmann's subdivisions of the cerebral cortex in the brain. It was defined by Brodmann in the guenon monkey. No equivalent structure exists in humans. B09-14 BIRNLEX:1745 @@ -616328,7 +615758,7 @@ UBERON:0013545 Brodmann (1909) area 14 - + @@ -616341,7 +615771,7 @@ - + vmPFC WP @@ -616620,7 +616050,7 @@ - + Brodmann area 19, or BA19, is part of the occipital lobe cortex in the human brain. Along with area 18, it comprises the extrastriate (or peristriate) cortex. In normally-sighted humans, extrastriate cortex is a visual association area, with feature-extracting, shape recognition, attentional, and multimodal integrating functions. This area is also known as peristriate area 19, and it refers to a subdivision of the cytoarchitecturally defined occipital region of cerebral cortex. In the human it is located in parts of the lingual gyrus, the cuneus, the lateral occipital gyrus (H) and the superior occipital gyrus (H) of the occipital lobe where it is bounded approximately by the parieto-occipital sulcus. Cytoarchitecturally it is bounded on one side by the parastriate area 18 which it surrounds. Rostrally it is bounded by the angular area 39 (H) and the occipitotemporal area 37 (H) (Brodmann-1909). B09-19 BIRNLEX:1750 @@ -616643,7 +616073,7 @@ UBERON:0013550 Brodmann (1909) area 19 - + @@ -616656,7 +616086,7 @@ - + WP @@ -617401,7 +616831,7 @@ - + Area 27 of Brodmann-1909 is a cytoarchitecturally defined cortical area that is a rostral part of the parahippocampal gyrus of the guenon (Brodmann-1909). It is commonly regarded as a synonym of presubiculum (Crosby-62). [WP,unvetted]. B09-27 BIRNLEX:1758 @@ -617424,7 +616854,7 @@ UBERON:0013558 Brodmann (1909) area 27 - + @@ -617437,7 +616867,7 @@ - + consider merging many sources treat as synonymous @@ -617539,7 +616969,7 @@ - + B09-28 BIRNLEX:1759 FMA:68625 @@ -617561,7 +616991,7 @@ Brodmann (1909) area 28 http://upload.wikimedia.org/wikipedia/commons/7/76/Brodmann_Cytoarchitectonics_28.png - + @@ -617574,7 +617004,7 @@ - + consider merging many sources treat as synonymous @@ -617991,7 +617421,7 @@ - + Brodmann area 40, or BA40, is part of the parietal cortex in the human brain. The inferior part of BA40 is in the area of the supramarginal gyrus, which lies at the posterior end of the lateral fissure, in the inferior lateral part of the parietal lobe. It is bounded approximately by the intraparietal sulcus, the inferior postcentral sulcus, the posterior subcentral sulcus and the lateral sulcus. Cytoarchitecturally it is bounded caudally by the angular area 39 (H), rostrally and dorsally by the caudal postcentral area 2, and ventrally by the subcentral area 43 and the superior temporal area 22 (Brodmann-1909). Cytoarchitectonically defined subregions of rostral BA40/the supramarginal gyrus are PF, PFcm, PFm, PFop, and PFt. Area PF is the homologue to macaque area PF, part of the mirror neuron system, and active in humans during imitation. The supramarginal gyrus part of Brodmann area 40 is the region in the inferior parietal lobe that is involved in reading both in regards to meaning and phonology. [WP,unvetted]. B09-40 BIRNLEX:1773 @@ -618010,7 +617440,7 @@ UBERON:0013573 Brodmann (1909) area 40 - + @@ -618023,7 +617453,7 @@ - + consider merging many sources treat as synonymous @@ -619521,7 +618951,7 @@ - + Ossicle that develops within bands of dense, regular connective tissue (e.g., tendons and ligaments). Sesamoids are generally located proximate to a bony prominence, over which the dense regular connective tissue wraps, and/or a joint or articulation. VSAO:0000137 sesamoid @@ -619529,7 +618959,7 @@ Sesamoids are often endochondral replacement elements and in addition to bone tissue, may also be composed of articular cartilage, fibrocartilage, hyaline cartilage, and calcified cartilage. sesamoid element - + @@ -619542,7 +618972,7 @@ - + VSAO @@ -619713,7 +619143,7 @@ - + An epithelium that is part of a intestinal villus. FMA:63587 intestinal villus epithelium @@ -619722,14 +619152,14 @@ UBERON:0013636 epithelium of intestinal villus - + - + FMA @@ -620055,7 +619485,7 @@ - + The buccal nerve (also called the long buccal nerve) is a nerve in the face. It is a branch of the mandibular nerve (which is itself a branch of the trigeminal nerve) and transmits sensory information from skin over the buccal membrane (in general, the cheek) and from the second and third molar teeth. BAMS:bucn FMA:53066 @@ -620068,14 +619498,14 @@ UBERON:0013646 buccal nerve - + - + FMA @@ -620132,7 +619562,7 @@ - + A nerve that innervates the lateral pterygoid muscle. The nerve to the Pterygoideus externus frequently arises in conjunction with the buccinator nerve, but it may be given off separately from the anterior division of the mandibular nerve. It enters the deep surface of the muscle. FMA:53107 @@ -620145,14 +619575,14 @@ UBERON:0013647 lateral pterygoid nerve - + - + FMA @@ -620209,7 +619639,7 @@ - + @@ -620228,14 +619658,14 @@ masseteric artery - + - + FMA @@ -620338,7 +619768,7 @@ - + @@ -620352,14 +619782,14 @@ UBERON:0013653 velar skeleton - + - + in hagfishes it is difficult to separate neurocranium from visceral skeleton @@ -620515,8 +619945,8 @@ - - + + A bulbous ridge of highly vascularized tissue that runs along the center of the hard palate, expanding cranially to form two large lobes that terminate under the tip of the rostral palate, with another enlarged node at the caudal terminus. palatal organ palatal corpus cavernosum maxillaris @@ -620524,24 +619954,24 @@ UBERON:0013658 corpus cavernosum maxillaris - + - + - + PMID:23450839 - + PMID:23450839 @@ -622405,7 +621835,7 @@ - + @@ -622441,14 +621871,14 @@ UBERON:0013715 ilio-marsupialis muscle - + - + DOI:10.1046/j.1469-7580.2002.00087.x @@ -622969,7 +622399,7 @@ - + @@ -622994,14 +622424,14 @@ UBERON:0013731 basilar papilla - + - + MA-abduced @@ -623040,20 +622470,20 @@ - + A tube leading from the external naris to the nasal cavity. AAO:0000984 UBERON:0013732 vestibule of nasal cavity - + - + AAO @@ -623112,7 +622542,7 @@ - + Nucleus of the medial ventral tegmental area, originally identified in the rat but also in cat, monkey and human, comprising an average of 7% volume of the VTA across the different species, with the largest being present in the cat. Brain Info does not list the linear nuclei as part of the ventral tegmental area but as a co-area of the midbrain tegmentum. Am assuming the rostral linear nucleus of the raphe is synonymous, but needs further review. (NIF) BAMS:LR @@ -623128,14 +622558,14 @@ UBERON:0013734 rostral linear nucleus - + - + NIFSTD @@ -623202,7 +622632,7 @@ - + PN DHBA:12265 FMA:77497 @@ -623211,7 +622641,7 @@ UBERON:0013737 paranigral nucleus - + @@ -623224,7 +622654,7 @@ - + PMID:21653852 @@ -623243,7 +622673,7 @@ - + Nucleus identified in the medial ventral tegmental area that borders the red nucleus and superior cerebellar peduncle dorsally, the medial lemniscus laterally, the subtantia nigra pars compacta and paranigral nucleus ventrally and the rostral linear nucleus and interfascicular nucleus medially. Generally, the largest nucleus in the ventral tegmental area, occupying an average of 50% of the total volume as measured in rat, cat, monkey and human. PBP BAMS:PBP @@ -623256,14 +622686,14 @@ UBERON:0013738 parabrachial pigmental nucleus - + - + NIF PMID:21653852 @@ -623532,7 +622962,7 @@ - + Endochondral element that is ventral, median, and associated with a single pharyngeal arch in the pharyngeal arch 3-7 skeleton. Median ventral cartilage or bony element at the ventral point of a branchial arch, behind the tongue[http://www.fishbase.org/Glossary/Glossary.php?q=basibranchial&sc=is]. basibranchial @@ -623542,14 +622972,14 @@ UBERON:0013746 basibranchial element - + - + ZFA @@ -623632,7 +623062,7 @@ - + A metaphysis that is part of a ulna. FMA:33767 metaphysis of ulna @@ -623640,14 +623070,14 @@ ulnar metaphysis - + - + FMA @@ -625020,7 +624450,7 @@ - + @@ -625036,14 +624466,14 @@ skin of palm of manus - + - + FMA @@ -625241,7 +624671,7 @@ - + Most superficial of 3 cytoarchitecturally defined layers of the piriform cortex, characterized by few neuronal cell bodies. It has been divided into a superficial part and a deep part. NLXANAT:091003 layer 1 of piriform cortex @@ -625256,14 +624686,14 @@ UBERON:0014277 piriform cortex layer 1 - + - + NIFSTD @@ -625334,7 +624764,7 @@ - + @@ -625355,14 +624785,14 @@ UBERON:0014280 piriform cortex layer 2 - + - + NIFSTD @@ -625421,7 +624851,7 @@ - + @@ -625437,14 +624867,14 @@ UBERON:0014283 piriform cortex layer 3 - + - + NIFSTD @@ -625478,7 +624908,7 @@ - + An elongated nucleus consisting largely of multipolar spiny cells lying deep to the piriform cortex. According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, (Ed.), Academic Press, San Diego), it is part of the claustrum. @@ -625497,14 +624927,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014284 endopiriform nucleus - + - + NIFSTD @@ -625557,20 +624987,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLXANAT:100307 dorsal cap of kooy UBERON:0014286 dorsal cap of Kooy - + - + NIFSTD @@ -625586,7 +625016,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Regional part of the inferior olivary complex. BAMS:IOma NLXANAT:100309 @@ -625596,14 +625026,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014287 medial accessory olive - + - + NIFSTD @@ -625651,7 +625081,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of cortical areas related by direct or indirect connectivity to the striate area 17 and functionally involved primarily in vision. They include the parastriate area 18, the peristriate area 19 and adjacent areas in the parietal lobe and temporal lobe (Adapted from BrainInfo and Zilles-1990). BTO:0004704 @@ -625667,7 +625097,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014370 extrastriate cortex - + @@ -625680,7 +625110,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + WP @@ -625743,7 +625173,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -625760,14 +625190,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( paired anteriolateral division of the embryonic prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived[MP] future telencephalon - + - + definitional @@ -625836,7 +625266,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Embryoid bodies (EBs) are three-dimensional aggregates of pluripotent stem cells. Embryoid bodies are structures resembling embryos, occurring in several types of germ cell tumors[BTO]. BTO:0001718 @@ -625849,7 +625279,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( EDITOR_NOTE in future this class may be ceded to another ontology if it falls outside the scope of in-vivo, non-pathological biology embryoid body - + @@ -625862,7 +625292,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Wikipedia @@ -626816,7 +626246,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A short projection from the base of the manubrium of the malleus, attached firmly to the drum membrane. FMA:52770 MA:0002994 @@ -626831,14 +626261,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014397 lateral process of malleus - + - + FMA @@ -627252,7 +626682,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -627318,8 +626747,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -627336,25 +626765,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014410 fibularis quartus - + - + - + may also originate from the longus PMID:14653594 - + PMID:14653594 @@ -627608,7 +627037,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -627630,14 +627059,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014440 ischiopubic ramus - + - + FMA @@ -627948,7 +627377,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A neural nucleus of the pretectal area (between dorsal thalamus and optic tectum) that receives afferents primarily from the retina and the optic tectum and are involved in modulating motor behavior in response to visual input. @@ -627975,14 +627404,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( pretectal nucleus - + - + MP @@ -628462,7 +627891,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + One of two bilaterally symmetrical holes (fenestrae) in the temporal bone. @@ -628470,14 +627899,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014459 temporal fenestra - + - + not present in earliest amniotes Wikipedia @@ -628912,7 +628341,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Fissure between cerebellar lobules I and II. compare with precentral sulcus BAMS:pce @@ -628933,14 +628362,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014473 precentral fissure of cerebellum - + - + NIFSTD @@ -629198,8 +628627,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -629220,24 +628649,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014479 elephant trunk - + - + - + Wikipedia - + Wikipedia @@ -630634,7 +630063,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ADMG BAMS:MGad BIRNLEX:1600 @@ -630646,14 +630075,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014521 anterodorsal nucleus of medial geniculate body - + - + NIFSTD @@ -631435,8 +630864,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + Is located ventral to the basal nucleus and has three subdivisions: the periamygdaloid cortex, the medial division, and the sulcal division. BAMS:PAC MESH:D066277 @@ -631447,24 +630876,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014537 periamygdaloid cortex - + - + - + NIFSTD - + NIFSTD @@ -631503,12 +630932,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - - - - - @@ -631746,12 +631169,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( thoracic division of spinal cord central canal - - - - - NIFSTD - @@ -631804,12 +631221,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014542 cervical division of cord spinal central canal - - - - - NIFSTD - @@ -631864,12 +631275,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( lumbar division of spinal cord central canal - - - - - NIFSTD - @@ -632041,7 +631446,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + CA1 part of stratum pyramidale hippocampi. BIRNLEX:4110 DMBA:16133 @@ -632062,14 +631467,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014548 pyramidal layer of CA1 - + - + NN-text @@ -632151,7 +631556,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Part of pyramidal cell layer in area CA2, lying superficial to the CA2 stratum oriens, and deep to the stratum radiatum of CA2, continuous with the pyramidal cell layers of CA1 and CA3. BIRNLEX:4111 EMAPA:36480 @@ -632167,14 +631572,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014549 pyramidal layer of CA2 - + - + NN-text @@ -632238,7 +631643,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A layer of hippocampal field that is part of a hippocampus pyramidal layer and is part of a CA3 field of hippocampus. BIRNLEX:4112 EMAPA:36448 @@ -632254,14 +631659,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014550 pyramidal layer of CA3 - + - + NN-text @@ -633029,7 +632434,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Part of dorsal tegmental nucleus characterized by round, small cells that are lightly stained in Nissl preparations. According to Hayakawa and Zuo (1983), the TDD cannot be clearly identified in the tree shrew or in human NLXANAT:20090407 @@ -633038,14 +632443,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014568 dorsal tegmental nucleus pars dorsalis - + - + NIFSTD @@ -633073,7 +632478,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Cytoarchitectural part of the dorsal tegmental nucleus based on cell size. The pars ventralis is characterized by medium sized oval or triangular cells that stain darkly in NIssl stains. According to Hayakawa and Zuo (1983), the TDV cannot be clearly identified in the tree shrew or in human NLXANAT:20090408 @@ -633084,14 +632489,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014569 dorsal tegmental nucleus pars ventralis - + - + NIFSTD @@ -633463,7 +632868,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + TMd BAMS:TMd BIRNLEX:1290 @@ -633474,14 +632879,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014593 tuberomammillary nucleus dorsal part - + - + NIFSTD @@ -633512,7 +632917,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + TMv BAMS:TMv BIRNLEX:1294 @@ -633521,14 +632926,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014594 tuberomammillary nucleus ventral part - + - + NIFSTD @@ -634139,7 +633544,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The ventral portion of the dorsal striatum, linking the caudate nucleus and the putamen anteriorly (adapted from Wikipedia). BAMS:FS BAMS:FStr @@ -634154,14 +633559,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014605 fundus striati - + - + ABA @@ -635474,7 +634879,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:2676 FMA:77038 @@ -635487,14 +634892,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014630 ventral gray commissure of spinal cord - + - + FMA @@ -635541,7 +634946,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The part of the gray commissure in the spinal central gray posterior to the central canal of the spinal cord. It is identified by Nissl stain and found in the human ( Crosby-1962 ) and the rat ( Swanson-2004 ). BIRNLEX:2677 @@ -635557,14 +634962,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014631 dorsal gray commissure of spinal cord - + - + FMA @@ -637655,7 +637060,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -637671,14 +637076,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( deep auricular artery - + - + FMA @@ -637694,7 +637099,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The anterior choroidal artery originates from the internal carotid artery, though it also rarely arises from the middle cerebral artery. @@ -637707,14 +637112,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( anterior choroidal artery - + - + FMA @@ -637745,21 +637150,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:50657 NCIT:C33352 SCTID:369342007 UBERON:0014697 posterior choroidal artery - + - + FMA @@ -637902,14 +637307,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An epithelium that is part of a frontonasal prominence. EHDAA2:0004108 EMAPA:32918 UBERON:0014702 frontonasal process epithelium - + @@ -637922,7 +637327,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2 @@ -637990,7 +637395,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -638004,14 +637409,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014704 pleuroperitoneal canal lumen - + - + EHDAA2 @@ -638053,7 +637458,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An epithelium that is part of a median lingual swelling. EHDAA2:0001085 EMAPA:17188 @@ -638061,7 +637466,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014705 median lingual swelling epithelium - + @@ -638074,7 +637479,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2 @@ -638097,7 +637502,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2:0001147 EMAPA:17646 metanephros primitive collecting ducts @@ -638105,7 +637510,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014706 primitive renal collecting duct system - + @@ -638118,7 +637523,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2 @@ -638294,19 +637699,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An epithelium that is part of a carapacial ridge. UBERON:0014712 carapacial ridge ectoderm - + - + cjm @@ -638789,7 +638194,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -638804,14 +638209,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Examples: compound eye; Johnston's organ. compound cell cluster organ - + - + 2 @@ -639628,7 +639033,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Brainstem tract formed by the central processes of first-order, trigeminal ganglion neurons that extends from the caudal medulla to the midpons. This tract conveys nociceptive and thermal information from the face to second-order neurons in the spinal nucleus of the trigeminal complex. BAMS:sp5 BTO:0003701 @@ -639653,14 +639058,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014761 spinal trigeminal tract - + - + BTO @@ -639936,7 +639341,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -639964,14 +639369,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Classification notes: May be considered an external sphincter[PMID:8224664] crus of diaphragm - + - + PMID:23586979 @@ -640302,7 +639707,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The lateral palpebral arteries are small arteries which supply the eyelid. @@ -640315,14 +639720,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( lateral palpebral artery - + - + FMA @@ -640356,7 +639761,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The medial palpebral arteries (internal palpebral arteries) are arteries of the head. They are two in number, superior and inferior, arise from the ophthalmic, opposite the pulley of the Obliquus superior. FMA:50012 @@ -640372,14 +639777,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( medial palpebral artery - + - + FMA @@ -640707,9 +640112,9 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - - + + + EHDAA2:0000113 EMAPA:28547 allantois @@ -640717,15 +640122,15 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( remnant of allantois in embryo allantois of embryonic urinary system - + - + - + @@ -640738,19 +640143,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -640877,43 +640282,43 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - - + + + Extraembryonic part of the vein passing through the umbilical cord to the fetus and returning the purified and nutrient blood from the placenta. VHOG:0000015 extraembryonic umbilical vein UBERON:0014786 extraembryonic umbilical vein - + - + - + - + EHDAA2 - + EHDAA2 - + EHDAA2 @@ -641342,19 +640747,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin). UBERON:0014794 pectoral appendage muscle - + - + prolog @@ -641381,19 +640786,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Any muscle organ that is part of a pelvic appendage (hindlimb or pelvic fin). UBERON:0014795 pelvic appendage muscle - + - + prolog @@ -641523,31 +640928,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A jaw muscle that arises from trunk somites and is innervated by spinal nerves. UBERON:0014797 hypobranchial group muscle - + - + - + ISBN:0073040584 - + ISBN:0073040584 @@ -641925,30 +641330,30 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A dorsal muscle of lower tetrapods. UBERON:0014842 puboischiofemoralis muscle - + - + - + ISBN:0073040584 - + ISBN:0073040584 @@ -641984,8 +641389,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -642011,24 +641416,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( vastus intermedius - + - + - + ISBN:0073040584 - + dbpedia @@ -642093,7 +641498,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:46900 SCTID:245175008 common tendon of quadriceps femoris @@ -642105,7 +641510,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014848 tendon of quadriceps femoris - + @@ -642118,7 +641523,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -642443,7 +641848,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Leaflet of mitral valve which is attached to the posterior head of the lateral papillary muscle of left ventricle through the chorda tendinea of the left ventricle. FMA:7243 SCTID:244355000 @@ -642458,7 +641863,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0014855 posterior leaflet of mitral valve - + @@ -642471,7 +641876,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -642538,7 +641943,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -642577,7 +641981,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -642608,7 +642011,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -642658,7 +642060,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -642695,7 +642096,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -642720,7 +642120,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -642753,7 +642152,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -644037,7 +643435,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles). - GOC:dos + https://orcid.org/0000-0002-7073-9172 @@ -644071,7 +643469,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( A muscle structure of invertebrates whose origin and insertion sites are in basal side of the epidermis or structures derived from it. The simplest somatic muscles consist of a single cell and associated extracellular structures. - GOC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -644118,7 +643516,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( A somatic muscle that consists of one or more somatic muscle myotubes and any associated extracellular structures. - GOC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -644152,7 +643550,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( A somatic muscle that consists of one or more obliquely striated muscle cells and any associated extracellular structures. - GOC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -644161,20 +643559,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + In those cases in which the interilial region is broadly expanded and the pubis is extremely reduced, the anterior margin of the ischium forms an expanded area. AAO:0000881 UBERON:0014898 lamina terminalis of ischium - + - + AAO @@ -644365,7 +643763,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites. Blood vessels that connect the dorsal aorta or the posterior cardinal vein and the dorsal longitudinal anastomotic vessel. They run along the vertical myotomal boundaries. At early stages these don't have venous or arterial markers[ZFA:0001285, ZFIN:ZDB-PUB-030908-4]. EFO:0003664 @@ -644382,7 +643780,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( intersomitic vessel - + @@ -644395,7 +643793,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ZFA @@ -644644,7 +644042,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The bend in the facial nerve at the lateral end of the internal acoustic meatus. first genu DHBA:12738 @@ -644667,7 +644065,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( genu of facial nerve - + @@ -644680,7 +644078,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -645196,19 +644594,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + these layers primarily refer to the mammalian future neocortex UBERON:0014950 layer of developing cerebral cortex - + - + EMAPA @@ -648631,7 +648029,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -648643,7 +648041,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015062 bone condensation - + @@ -648656,7 +648054,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + AEO @@ -648684,20 +648082,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An endochondral element that is part of a autopod region. UBERON:0015063 autopod endochondral element - + - + cjm @@ -650051,7 +649449,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -650070,7 +649468,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( In the developed brain, the lamina terminalis remains as the thin rostral wall of the third ventricle, stretching from the bases of the major cerebral commissures (the anterior commissure, the commissure of the fornix, and the rostrum of the corpus callosum) to the dorsal surface of the optic chiasm[MGI:anna] lamina terminalis of cerebral hemisphere - + @@ -650083,7 +649481,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -650477,7 +649875,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + consider merging into myocardial compact layer FMA:83105 perimysial connective tissue of subepicardium @@ -650485,14 +649883,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015128 subepicardial layer of epicardium - + - + FMA @@ -650781,7 +650179,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -650796,14 +650194,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( infundibulum of gallbladder - + - + FMA @@ -651229,7 +650627,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. the only orbital gland found in anuran amphibians is either the Harderian or the lacrimal; if it is a lacrimal, then a progressive lateral migration of the lacrimal glands must occur through the amniotes[PMID:7559104] the only orbital gland found in anuran amphibians is the Harderian[PMID:8843648] @@ -651239,14 +650637,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015152 gland of ocular region - + - + inferred @@ -651396,7 +650794,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The middle temporal artery occasionally gives off a zygomatico-orbital branch, which runs along the upper border of the zygomatic arch, between the two layers of the temporal fascia, to the lateral angle of the orbit. This branch, which may arise directly from the superficial temporal artery, supplies the Orbicularis oculi, and anastomoses with the lacrimal and palpebral branches of the ophthalmic artery. FMA:49663 @@ -651408,14 +650806,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( zygomatico-orbital artery - + - + FMA @@ -651449,20 +650847,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ophthalmotemporal artery UBERON:0015158 The blood supply to the (Harderian) gland has been reported in greatest detail in the sparrow Passer domesticus (Slonaker, 1918), where it is derived through the ophthalmotemporal branch of the external ophthalmic artery http://www.ncbi.nlm.nih.gov/pubmed/7559104 ophthalmotemporal branch of external ophthalmic artery - + - + PMID:7559104 @@ -651550,7 +650948,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -651580,14 +650978,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015161 inferior branch of oculomotor nerve - + - + AAO Wikipedia @@ -652156,7 +651554,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -652186,14 +651584,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( helicine artery of penis - + - + FMA @@ -652595,8 +651993,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( An anatomical group whose component structures share a common function. AEO:0000093 AEO:JB - FBC:DOS FBbt:00007278 + https://orcid.org/0000-0002-7073-9172 @@ -652789,21 +652187,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:18593 FMA:53146 SCTID:310212002 UBERON:0015216 nasal meatus - + - + EMAPA @@ -653110,7 +652508,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The caudal, pulsatile region of the dorsal vessel of the arthropod circulatory system. FBbt has two terms that are both narrower than this, for adult heart, and embryonic/larval heart. FBbt:00003154 @@ -653121,14 +652519,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015230 dorsal vessel heart - + - + FBbt @@ -653338,7 +652736,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A cluster in the epithalamus that consists of the pineal body and any associated structures, such as the parapineal gland or the parietal organ. The complex is poorly developed in mammals. TAO:0001359 @@ -653346,14 +652744,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015238 pineal complex - + - + ZFA @@ -653369,7 +652767,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry[ZFA:0001360, ZFIN:ZDB-PUB-030206-1]. In lampreys and apparently in some fossil fish, the parapineal body and the pineal body (epiphysis) are a bilateral pair of structures rather than being located in series, one in front of the other. A pair of visual structures may have been the ancestral condition of this pineal complex (Weichert, 1970, p.622). The parapineal organs of lampreys, tadpoles, and lizards possess cells similar to rods and cones. Frogs possess a brow spot or frontal organ where ancestral pineal eye might have been (Weichert, 1970, p.622) @@ -653379,7 +652777,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015241 parapineal organ - + @@ -653392,7 +652790,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ZFA @@ -653418,7 +652816,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -653440,7 +652838,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015243 lower part of vagina - + @@ -653453,7 +652851,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA @@ -653493,7 +652891,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -653510,14 +652908,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015244 accessory olfactory bulb granule cell layer - + - + MA @@ -653545,38 +652943,38 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + - + A spatially segregated cluster of sensory cells in the nasal cavity. EMAPA:35764 MA:0001327 UBERON:0015245 septal olfactory organ - + - + - + NCBIBook:NBK55971 - + MA @@ -653655,7 +653053,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -653678,14 +653076,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015247 bifurcation of trachea - + - + MA @@ -653757,32 +653155,32 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + EMAPA:37610 MA:0003019 interolivary commissure UBERON:0015250 inferior olivary commissure - + - + - + MA - + MA-modified @@ -653961,21 +653359,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A basement membrane of epithelium that is part of a respiratory system. EMAPA:37570 MA:0001815 UBERON:0015329 respiratory system basement membrane - + - + MA @@ -654178,8 +653576,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The segment of either hepatic duct located in the hilum of the liver. EMAPA:37599 MA:0002665 @@ -654189,11 +653587,11 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015423 hilar portion of hepatic duct - + - + @@ -654206,13 +653604,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MA - + located in or on the hilum, but not part of the liver @@ -654292,7 +653690,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -654308,14 +653706,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015432 accessory olfactory bulb mitral cell layer - + - + MA @@ -654331,7 +653729,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A thin layer of fibrous tissue capable of stretching and contracting. It is part of the tunica media of the blood vessels. in FMA this is classified as an acellular membrane, which is inconsistent with our classification as a tissue layer. Requires further investigation EMAPA:36302 @@ -654344,7 +653742,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015433 blood vessel external elastic membrane - + @@ -654357,7 +653755,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MA @@ -654934,7 +654332,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The hepatic artery proper (also proper hepatic artery), arises from the common hepatic artery and runs alongside the portal vein and the common bile duct to form the portal triad. The hepatic artery proper gives off a small supraduodenal artery to the duodenal bulb. Then the right gastric artery comes off and runs to the left along the lesser curvature of the stomach to meet the left gastric artery, which is a branch of the celiac trunk. It subsequently gives off the cystic artery, which feeds the gallbladder, before bifurcating into the right and left hepatic arteries. Of note, the right and left hepatic arteries may demonstrate variant anatomy. A replaced right hepatic artery may arise from the superior mesenteric artery (SMA) and a replaced left hepatic artery may arise from the left gastric artery. EMAPA:37217 @@ -654948,7 +654346,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( proper hepatic artery - + @@ -654961,7 +654359,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -654998,13 +654396,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + @@ -655023,16 +654429,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( left hepatic artery - - - - - - - - - FMA - @@ -655075,13 +654471,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + @@ -655100,16 +654504,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( right hepatic artery - - - - - - - - - FMA - @@ -655266,7 +654660,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The sural nerve (short saphenous nerve), formed by the junction of the medial sural cutaneous with the peroneal anastomotic branch of the lateral sural cutaneous nerve, passes downward near the lateral margin of the tendo calcaneus, lying close to the small saphenous vein, to the interval between the lateral malleolus and the calcaneus. It runs forward below the lateral malleolus, and is continued as the lateral dorsal cutaneous nerve along the lateral side of the foot and little toe (via a dorsal digital nerve), communicating on the dorsum of the foot with the intermediate dorsal cutaneous nerve, a branch of the superficial peroneal. In the leg, its branches communicate with those of the posterior femoral cutaneous. sural EMAPA:37757 @@ -655281,14 +654675,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015488 sural nerve - + - + FMA @@ -656503,8 +655897,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + Thin layer of cortex lying on the dorsal surface of the corpus callosum. It has been debated whether it is more related to the hippocampus or the olfactory bulb (Shipley et al., Olfactory System In Paxinos The Rat Nervous System, 2nd ed). DHBA:10304 DMBA:16147 @@ -656524,24 +655918,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015793 induseum griseum - + - + - + MA - + FMA @@ -656834,7 +656228,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -657051,7 +656445,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A lamina propria that is part of a duodenum. EMAPA:27255 @@ -657064,14 +656458,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( duodenum lamina propria - + - + FMA @@ -657696,19 +657090,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A dental pulp that is part of a narwhal tusk. UBERON:0015853 dental pulp of median incisor tusk - + - + DOI:10.1002/ar.22886 @@ -658730,7 +658124,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:61082 NCIT:C32420 SCTID:362545007 @@ -658739,14 +658133,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015885 cymba conchae of pinna - + - + FMA @@ -658762,7 +658156,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The part of the nail plate that extends into the dermis (nail matrix). FMA:60128 NCIT:C33495 @@ -658772,14 +658166,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0015886 root of nail - + - + FMA @@ -660028,7 +659422,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The circumference of the base of the glans forms a rounded projecting border, the corona of the glans penis, overhanging a deep retroglandular sulcus, behind which is the neck of the penis. FMA:19627 SCTID:362274002 @@ -660040,14 +659434,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( corona of glans penis - + - + FMA @@ -660077,21 +659471,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:19649 glans penile base UBERON:0016409 base of glans penis - + - + FMA @@ -660164,21 +659558,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:24003 central part of body of vertebra UBERON:0016412 central part of body of bony vertebral centrum - + - + FMA @@ -660230,7 +659624,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Subdivision of thorax which is anterior to the plane of the posterior boundary of the middle mediastinum. FMA:24816 SCTID:182331006 @@ -660241,14 +659635,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( anterior chest - + - + FMA @@ -660335,20 +659729,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:29741 bony part of arch of vertebra UBERON:0016419 bony part of vertebral arch - + - + FMA @@ -660506,7 +659900,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The palmar branch of the median nerve is a branch of the median nerve which arises at the lower part of the forearm and innervates skin of proximal central palm and thenar eminence. does not pass through the carpal tunnel @@ -660522,14 +659916,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( palmar branch of median nerve - + - + FMA @@ -661223,7 +660617,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The midline prominence of the nose, extending from the nasal root to the tip. FMA:59517 SCTID:368114008 @@ -661233,14 +660627,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( dorsum of nose - + - + FMA @@ -661268,8 +660662,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + On the pinna, a curved prominence of cartilage, parallel with and in front of the helix, is called the antihelix, also known as the anthelix; this divides above into two crura, the crura antihelicis, between which is a triangular depression, the fossa triangularis. FMA:60995 NCIT:C32120 @@ -661284,24 +660678,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( antihelix - + - + - + FMA - + http://php.med.unsw.edu.au @@ -661341,8 +660735,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The antitragus is a feature of human ear anatomy. It is a small tubercle that points anteriorly. It is separated from the tragus by the intertragic notch. FMA:61001 NCIT:C32121 @@ -661354,24 +660748,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( antitragus - + - + - + FMA - + http://php.med.unsw.edu.au @@ -661784,7 +661178,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A soft, thin film of food debris, mucin, and dead epithelial cells deposited on the teeth, providing the medium for the growth of various bacteria. The main inorganic components are calcium and phosphorus, with small amounts of magnesium, potassium, and sodium; the organic matrix consists of polysaccharides, proteins, carbohydrates, lipids, and other components. Plaque plays an important etiologic role in the development of dental caries and periodontal and gingival diseases and provides the base for the development of materia alba; calcified plaque forms dental calculus. BTO:0000338 MESH:D003773 @@ -661794,14 +661188,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016482 dental plaque - + - + BTO @@ -662013,7 +661407,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Skeletal element that functionally replaces the notochord[VSAP,modified]. Skeletal element that surrounds the notochord.[VSAO] the main cylindrical portion of the vertebra ventral to the vertebral canal @@ -662025,7 +661419,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016491 vertebral centrum element - + @@ -662038,7 +661432,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + VSAO @@ -662292,7 +661686,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -662312,14 +661706,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016498 intestinal-cloacal junction - + - + ZFA-modified @@ -662423,7 +661817,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A muscularis mucosa that is part of a fundus of urinary bladder. EMAPA:28625 @@ -662431,14 +661825,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( muscularis mucosa of fundus of urinary bladder - + - + EMAPA @@ -662465,32 +661859,32 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A muscularis mucosa that is part of a fundus of stomach. EMAPA:27165 FMA:17278 UBERON:0016501 muscularis mucosae of fundus of stomach - + - + - + FMA - + FMA @@ -662557,7 +661951,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -662572,7 +661966,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016504 umbilical ring - + @@ -662585,7 +661979,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA @@ -663150,7 +662544,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A muscularis mucosa that is part of a jejunum. EMAPA:27121 @@ -663159,14 +662553,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( muscularis mucosae of jejunum - + - + FMA @@ -664163,17 +663557,17 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + EHDAA2:0000566 UBERON:0016547 lower foregut region endoderm - + - + @@ -664186,13 +663580,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2 - + EHDAA2 @@ -664591,7 +663985,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An acellular membrane in the vestibular labyrinth that is composed of the otoconial layer, gelatinous layer, and a subcupular meshwork. FMA:75570 otoconial-statoconial membrane @@ -664600,7 +663994,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( See https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/132/ statoconial membrane - + @@ -664613,7 +664007,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Wikipedia @@ -664636,12 +664030,12 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:75588 UBERON:0016568 gelatinous layer of statoconial membrane - + @@ -664654,7 +664048,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -665170,7 +664564,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:68868 neuronames:1700 rexed lamina VII @@ -665182,7 +664576,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016578 lamina VII of gray matter of spinal cord - + @@ -665195,7 +664589,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + https://github.com/obophenotype/uberon/issues/1277 @@ -665244,7 +664638,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:68869 neuronames:1701 rexed lamina VIII @@ -665256,7 +664650,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016579 lamina VIII of gray matter of spinal cord - + @@ -665269,7 +664663,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + https://github.com/obophenotype/uberon/issues/1277 @@ -665873,7 +665267,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:18306 isthmus tubae uterinae @@ -665884,7 +665278,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( isthmus of fallopian tube - + @@ -665897,7 +665291,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -666445,7 +665839,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:72580 neuronames:734 paramedian group (medullary reticular formation) @@ -666457,7 +665851,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016826 paramedian medullary reticular complex - + @@ -666470,7 +665864,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -666652,7 +666046,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -666670,14 +666064,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016843 lateral nucleus of trapezoid body - + - + to be verified @@ -667882,7 +667276,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The joint that is formed by the union of the humerus, the scapula (or shoulder blade), and the clavicle (or collarbone). Commonly thought of as a single joint, the shoulder is actually made up of two separate joints - the glenohumeral and acromioclavicular joints. MESH:D012785 SCTID:361835002 @@ -667890,14 +667284,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016884 shoulder joint - + - + definitional @@ -667999,7 +667393,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -668021,7 +667415,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016887 entire extraembryonic component - + @@ -668034,7 +667428,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + AEO @@ -668210,7 +667604,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -668228,14 +667622,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - + - + FMA @@ -668281,7 +667675,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -668301,14 +667695,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-female/v1.0/assets/3d-vh-f-mouth.glb https://cdn.humanatlas.io/digital-objects/ref-organ/mouth-male/v1.0/assets/3d-vh-m-mouth.glb - + - + FMA @@ -668344,7 +667738,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:62921 NCIT:C32917 UMLS:C1167355 @@ -668353,7 +667747,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016914 lamina lucida - + @@ -668366,7 +667760,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -668528,7 +667922,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:13082 descending aortic arch descending limb of arch of aorta @@ -668536,14 +667930,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016920 descending trunk of arch of aorta - + - + FMA @@ -668571,7 +667965,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Area of aorta proximal to the ductus arteriosus. FMA:3774 SCTID:197773005 @@ -668579,14 +667973,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016923 preductal region of aortic arch - + - + FMA @@ -668608,7 +668002,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Area of aorta distal to the ductus arteriosus. FMA:3776 SCTID:197852003 @@ -668616,14 +668010,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016924 postductal region of aortic arch - + - + FMA @@ -668645,7 +668039,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Area of aorta at the area of insertion to the ductus arteriosus. FMA:3771 FMA:3778 @@ -668657,14 +668051,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0016925 juxtaductal region of aortic arch - + - + FMA @@ -669494,20 +668888,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + retractor lateralis m. retractor lateralis UBERON:0017196 retractor lateralis muscle - + - + cjm @@ -669792,7 +669186,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The portion of the teeth, occurring on the lingual or palatal aspects, that forms a convex protuberance at the cervical third of the anatomic crown. It represents the lingual or palatal developmental lobe of these teeth. FMA has no definition but places this generically with upper, lower, canine, incisor subclasses. Wiktionary states cingulum is lower jaw molar only, and cingulid is upper molar only FMA:56731 @@ -669804,14 +669198,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0017295 cingulum of tooth - + - + FMA @@ -670879,7 +670273,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A paired dural venous sinus at the rim of the foramen magnum. EHDAA2:0001064 @@ -670891,7 +670285,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( marginal venous sinus - + @@ -670904,7 +670298,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2 @@ -670932,21 +670326,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The primitive marginal sinuses (PMS) are embryonic sinuses forming the later superior sagittal sinus. EHDAA2:0001514 marginal sinus UBERON:0017638 primitive marginal sinus - + - + EHDAA2 @@ -671009,7 +670403,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Branch of spinal nerve that innervates the structures of the vertebral column. FMA:5988 @@ -671023,14 +670417,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( meningeal branch of spinal nerve - + - + FMA @@ -671711,7 +671105,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A raised fleshy area on the palm of the hand near the base of the thumb. FMA:61520 SCTID:362748007 @@ -671721,14 +671115,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( thenar eminence - + - + FMA @@ -671750,7 +671144,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Hypothenar refers to a group of three muscles of the palm that control the motion of the little finger. The three muscles are: Abductor digiti minimi Flexor digiti minimi Opponens digiti minimi. FMA:61523 SCTID:362749004 @@ -671760,14 +671154,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( hypothenar eminence - + - + FMA @@ -672143,7 +671537,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The thinner portion of the muscle of the palatopharyngeal arch, originating in the region of the midline where its fibers interdigitate with the contralateral partner, then passing posterior to the levator veli palatini muscle to join the longitudinal layer of pharyngeal musculature; acts as a sort of sphincter, reducing the caliber of the isthmus of fauces at the palatopharyngeal arch. FMA:46684 SCTID:244801005 @@ -672155,14 +671549,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018103 posterior fascicle of palatopharyngeus - + - + FMA @@ -673592,7 +672986,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The lateral limit of each lateral part of the oral fissure. FMA:77269 MFMO:0000145 @@ -673604,14 +672998,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( angle of oral opening https://github.com/obophenotype/uberon/issues/1795 - + - + MFMO-modified @@ -673726,7 +673120,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A small, triangular, flaccid portion of the tympanic membrane, or eardrum, lying above the malleolar folds, attached directly to the petrous bone at the notch of Rivinus. Size varies across mammals, with the sheep pars flaccida larger than the human FMA:56721 @@ -673740,14 +673134,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018152 pars flaccida of tympanic membrane - + - + FMA @@ -673802,7 +673196,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:56722 SCTID:362555006 pars tensa (membrana tympanica) @@ -673810,14 +673204,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018153 pars tensa of tympanic membrane - + - + FMA @@ -674009,7 +673403,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:52771 SCTID:368922002 folian process @@ -674019,14 +673413,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018160 anterior process of malleus - + - + FMA @@ -674644,8 +674038,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A sensory tract originating in the spinal cord responsible for transmitting fine touch, vibration and conscious proprioceptive information from the body to the cerebral cortex. The components include the fasciculus gracilis and fasciculus cuneatus. DMBA:17759 Wikipedia:Posterior_column-medial_lemniscus_pathway @@ -674664,24 +674058,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018237 dorsal column-medial lemniscus pathway - + - + - + ISBN:978-1-4615-0037-7 - + Wikipedia @@ -674861,7 +674255,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -674885,14 +674279,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018240 panniculus carnosus muscle - + - + FFED:cw @@ -674927,7 +674321,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -675180,7 +674573,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -675199,14 +674592,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( The arteries supplying the thymus are derived from the internal thoracic artery, and from the superior thyroid artery and inferior thyroids.[WP] thymic artery - + - + FMA @@ -675516,7 +674909,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -675532,14 +674925,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( skeletal musculature - + - + MA @@ -675888,21 +675281,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The anterior or rostral end of the zygomatic arch, which includes the temporal process of the zygomatic bone, but also including some of the body of the zygomatic bone. It may also include the zygomatico-temporal suture and the most rostral portion of the zygomatic process of the temporal bone. requires definition see https://github.com/obophenotype/uberon/issues/492 MFMO:0000109 UBERON:0018265 anterior root of zygomatic arch - + - + MFMO @@ -678776,21 +678169,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A unit of the tectoral membrane that is shaped like string of flat, pearls. Modified from Manley, Fey and Popper 2008 . UBERON:0018374 sallet - + - + ISBN:9780387714691 @@ -679342,7 +678735,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The posterior superior alveolar artery (posterior dental artery) is given off from the maxillary, frequently in conjunction with the infraorbital just as the trunk of the vessel is passing into the pterygopalatine fossa. FMA:49757 @@ -679352,14 +678745,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( posterior superior alveolar artery - + - + FMA @@ -679398,7 +678791,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:52930 SCTID:280235006 SCTID:280239000 @@ -679406,14 +678799,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018398 superior alveolar nerve - + - + FMA @@ -679475,21 +678868,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:53243 SCTID:280261005 inferior dental nerve UBERON:0018405 inferior alveolar nerve - + - + FMA @@ -679523,7 +678916,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Mental nerve is a general somatic afferent (sensory) nerve which provides sensation to the anterior aspects of the chin and lower lip as well as the buccal gingivae of the mandibular anterior teeth and the premolars. It is a branch of the posterior trunk of the inferior alveolar nerve, which is itself a branch of the mandibular division of the trigeminal nerve (CN V). The nerve emerges at the mental foramen in the mandibula, and divides beneath the Depressor anguli oris muscle into three branches: one descends to the skin of the chin. two ascend to the skin and mucous membrane of the lower lip. These branches communicate freely with the facial nerve. FMA:53250 SCTID:280138001 @@ -679531,14 +678924,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018406 mental nerve - + - + FMA @@ -680812,8 +680205,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + Region where blood progenitor markers are expressed. Probable site of definitive hematopoiesis between 36hpf and 4dpf. EFO:0003699 TAO:0005028 @@ -680826,11 +680219,11 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0018549 ventral wall of dorsal aorta - + - + @@ -680843,13 +680236,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ZFA - + ZFA @@ -683211,21 +682604,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The peristomium is the second body segment in an annelid worm's body in the anterior end. It is directly behind the prostomium and contains the mouth, tentacular cirri, and sometimes feeding palps, which may instead occur on the prostomium. If an eversible pharynx is present, it is contained in this segment as well, and can fill up to 20 segments when inverted, depending on the species. peristomium Wikipedia:Peristomium UBERON:0018650 annelid peristomium - + - + Wikipedia @@ -683826,7 +683219,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Thoracic splanchnic nerves are splanchnic nerves that arise from the sympathetic trunk in the thorax and travel inferiorly to provide sympathetic innervation to the abdomen. The nerves contain preganglionic sympathetic and general visceral afferent fibers. FMA:6280 @@ -683835,14 +683228,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( thoracic splanchnic nerve - + - + FMA @@ -683973,7 +683366,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -684575,7 +683967,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -684611,14 +684003,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019197 dorsal nerve of penis - + - + FMA @@ -684682,7 +684074,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -684704,14 +684096,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019198 dorsal nerve of clitoris - + - + FMA @@ -684740,20 +684132,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + SCTID:182332004 side of chest UBERON:0019199 lateral side of chest - + - + FMA @@ -686281,7 +685673,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A fiber pathway in the cerebral white matter that connects anterior portions of the temporal lobe with the inferior frontal gyrus and the middle frontal gyrus. It is not readily distinguished in myelin-stained cross-sections (adapted from Brain Info). HBA:9284 NLX:98733 @@ -686290,14 +685682,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019275 uncinate fasciculus of the forebrain - + - + HBA @@ -686319,7 +685711,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1447 DHBA:12130 @@ -686328,14 +685720,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( inferior rostral gyrus - + - + DHBA @@ -686345,7 +685737,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1311 DHBA:12129 @@ -686355,14 +685747,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( superior rostral gyrus - + - + DHBA @@ -686378,21 +685770,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:146034876 UBERON:0019280 rostral gyrus - + - + DHBA @@ -686413,7 +685805,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12064 FMA:62439 @@ -686423,7 +685815,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019283 lateral longitudinal stria - + @@ -686436,7 +685828,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -686515,7 +685907,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DMBA:15965 EMAPA:35107 MA:0002932 @@ -686523,14 +685915,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019289 accessory olfactory bulb external plexiform layer - + - + MA @@ -686546,7 +685938,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DMBA:15962 EMAPA:35110 MA:0002934 @@ -686554,14 +685946,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019290 accessory olfactory bulb internal plexiform layer - + - + MA @@ -686930,7 +686322,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of cells located between the lateral septal nucleus and the anterior commissure in the mouse ( Paxinos-2001 ). Some authors regard it as part of the lateral septal nucleus ( Swanson-1998 ). DHBA:13033 DMBA:15761 @@ -686939,14 +686331,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0019308 septohypothalamic nucleus - + - + DHBA @@ -687098,21 +686490,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12649 HBA:9551 neuronames:1118 UBERON:0019314 epifascicular nucleus - + - + HBA @@ -687199,8 +686591,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( An exocrine gland that is part of a integumental system. - GOC:dos http://orcid.org/0000-0002-6601-2165 + https://orcid.org/0000-0002-7073-9172 @@ -687594,7 +686986,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:35694 MA:0002928 MBA:780 @@ -687602,14 +686994,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022229 posterior amygdaloid nucleus - + - + MA @@ -687625,7 +687017,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:35745 MA:0000920 MBA:822 @@ -687634,14 +687026,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022230 retrohippocampal region - + - + ABA @@ -687657,7 +687049,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -687670,14 +687062,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022232 secondary visual cortex - + - + cjm @@ -687696,8 +687088,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + DHBA:12066 FMA:67956 HBA:265505202 @@ -687718,11 +687110,11 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022234 medial longitudinal stria - + - + @@ -687735,13 +687127,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA - + HBA @@ -687895,7 +687287,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:266441633 FMA:62074 @@ -687909,14 +687301,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022237 anterior thalamic peduncle - + - + HBA @@ -688160,7 +687552,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The superior longitudinal fasciculus (also called the superior longitudinal fascicle or SLF) is a pair of long bi-directional bundles of neurons connecting the front and the back of the cerebrum. Each association fiber bundle is lateral to the centrum ovale of a cerebral hemisphere and connects the frontal, occipital, parietal, and temporal lobes. The neurons pass from the frontal lobe through the operculum to the posterior end of the lateral sulcus where numerous neurons radiate into the occipital lobe and other neurons turn downward and forward around the putamen and radiate to anterior portions of the temporal lobe. DHBA:10592 FMA:77631 @@ -688172,14 +687564,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022246 superior longitudinal fasciculus - + - + HBA @@ -688201,20 +687593,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:10568 FIFT UBERON:0022247 forebrain ipsilateral fiber tracts - + - + DHBA @@ -688360,7 +687752,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The precentral sulcus lies parallel to, and in front of, the central sulcus. (A sulcus is one of the prominent grooves on the surface of the human brain. ) The precentral sulcus divides the inferior, middle, and superior frontal gyri from the precentral gyrus. In the majority of brains, the precentral sulcus is divided into two parts: the inferior precentral sulcus and the superior precentral sulcus. However, the precentral sulcus may also be divided into three parts or form one continuous sulcus. DHBA:10628 FMA:83800 @@ -688371,7 +687763,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022252 precentral sulcus - + @@ -688384,7 +687776,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -688417,7 +687809,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The thalamic fasciculus is a component of the subthalamus. It is sometimes considered synonymous with 'field H1 of Forel'. Nerve fibres forming a composite bundle containing cerebellothalamic (crossed) and pallidothalamic (uncrossed) fibres that is insinuated between the thalamus and zona incerta. The thalamic fasciculus consists of the joint fibers of the ansa lenticularis and the lenticular fasciculus, coming from different portions of the medial globus pallidus, before they jointly enter the ventral lateral nucleus of the thalamus. DHBA:10593 FMA:62065 @@ -688444,14 +687836,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022254 ventral thalamic fasciculus - + - + DHBA @@ -688581,7 +687973,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -688608,14 +688000,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022256 subthalamic fasciculus - + - + DHBA @@ -688650,7 +688042,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12648 FMA:77099 HBA:9548 @@ -688658,14 +688050,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022258 endolemniscal nucleus - + - + HBA @@ -688743,7 +688135,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The acoustic radiations or auditory radiations are structures found in the brain, in the ventral cochlear pathway, a part of the auditory system. Lesions to the auditory radiations could be a cause of cortical deafness. DHBA:266441583 FMA:62413 @@ -688759,7 +688151,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022262 auditory radiation - + @@ -688772,7 +688164,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA @@ -688825,7 +688217,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The optic radiation (also known as the geniculo-calcarine tract or as the geniculostriate pathway) is a collection of axons from relay neurons in the lateral geniculate nucleus of the thalamus carrying visual information to the visual cortex (also called striate cortex) along the calcarine fissure. There is one such tract on each side of the brain. DHBA:266441621 @@ -688850,7 +688242,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + @@ -688863,7 +688255,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA @@ -688939,7 +688331,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The planum temporale is the cortical area just posterior to the auditory cortex within the Sylvian fissure. It is a triangular region which forms the heart of Wernicke's area, one of the most important functional areas for language. The planum temporale shows a significant asymmetry. In 65% of all individuals the left planum temporale appears to be more developed, while the right planum temporale is more developed in only 10%. In some peoplebs brains, the planum temporale is more than five times larger on the left than on the right, making it the most asymmetrical structure in the brain. This greater size of the left planum temporale compared with the right is already present in the foetus, where it can be observed starting from the 31st week of gestation. This observation strengthens the hypothesis of a genetic predisposition for brain asymmetry. @@ -688954,14 +688346,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + HBA @@ -688986,7 +688378,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Corticopontine fibers, commonly referred to as corticobulbar fibers, are projections from the cerebral cortex to the pontine nuclei. Depending upon the lobe of origin, they can be classified as frontopontine fibers, parietopontine fibers, temporopontine fibers and occipitopontine fibers. They are motor fibers that stretch from the precentral gyrus (motor strip) to the nuclei of cranial nerves V (trigenimal), VII (facial) and XII (hypoglossal). These fibers run alongside the corticospinal fibers. DHBA:266441721 FMA:75190 @@ -689007,14 +688399,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022271 corticopontine fibers - + - + HBA @@ -689085,7 +688477,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -689111,14 +688503,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022272 corticobulbar tract - + - + HBA @@ -689322,7 +688714,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The splenic (or left colic) flexure is a sharp bend between the transverse and the descending colon in the left upper quadrant of humans. The left colic flexure is near the spleen, and hence called the splenic flexure. There are two colic flexures in the transverse colon &mdash; the other being the hepatic flexure in the right upper quadrant. FMA:14551 @@ -689341,14 +688733,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + - + Wikipedia @@ -689422,7 +688814,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Hepatic (or the right colic) flexure is the sharp bend between the ascending and the transverse colon. The right colic flexure is adjacent to the liver, and is therefore also known as the hepatic flexure. Thus, the left colic flexure is also known as the splenic flexure (as it is close to the spleen). The hepatic flexure lies in the right upper quadrant of the abdomen in humans. FMA:14550 @@ -689441,14 +688833,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.3/assets/3d-sbu-f-large-intestine.glb https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.3/assets/3d-sbu-m-large-intestine.glb - + - + Wikipedia @@ -689913,7 +689305,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -689928,14 +689320,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022287 tear film - + - + primarily aqueous layer @@ -690111,7 +689503,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( The outer surface of an organism or its integumental system. - CARO:DOS + https://orcid.org/0000-0002-7073-9172 @@ -690119,7 +689511,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A nerve that innervates a lower eyelid and is a branch of the infra-orbital branch of the maxillary nerve. @@ -690129,7 +689521,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022296 inferior palpebral branch of infra-orbital nerve - + @@ -690145,7 +689537,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -690167,7 +689559,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -690182,7 +689574,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022297 palpebral branch of infra-orbital nerve - + @@ -690198,7 +689590,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -690282,8 +689674,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A branch of the ophthalmic nerve that serves to supply the mucous membrane of the nose, the tip of the nose, and the conjunctiva. BTO:0001452 @@ -690299,24 +689691,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( nasociliary nerve - + - + - + BTO - + FMA @@ -690626,8 +690018,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + Note that in some lamination schemes, more particularly so in primates, this layer is referred to as layer IV thus resulting in some confusion when compared to the present scheme where the lamina dissecans is referred to layer IV[DOI:10.1155/2008/381243] NLX:144263 primary motor cortex lamina V @@ -690635,24 +690027,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022315 primary motor cortex layer 5 - + - + - + nlx - + nlx @@ -690674,8 +690066,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + NLX:144264 primary motor cortex lamina 6 primary motor cortex lamina VI @@ -690683,24 +690075,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022316 primary motor cortex layer 6 - + - + - + nlx - + nlx @@ -690802,7 +690194,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -690821,14 +690213,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022318 olfactory cortex layer 2 - + - + nlx @@ -690933,7 +690325,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -690958,14 +690350,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( This layer is better developed in the medial entorhinal cortex although species differences are apparent[DOI:10.1155/2008/381243] entorhinal cortex layer 4 - + - + nlx @@ -691024,7 +690416,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -691044,14 +690436,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( entorhinal cortex layer 5 - + - + nlx @@ -691074,14 +690466,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLX:89 MoC dorsal cochlear nucleus molecular layer UBERON:0022326 molecular layer of dorsal cochlear nucleus - + @@ -691094,7 +690486,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nlx @@ -691128,7 +690520,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -691154,14 +690546,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( entorhinal cortex layer 3 - + - + nlx @@ -691219,7 +690611,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -691241,14 +690633,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( This layer is delineated by the white matter, multiple layers can be distinguished, more in particular in primates[DOI:10.1155/2008/381243] entorhinal cortex layer 6 - + - + nlx @@ -691384,7 +690776,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -691407,14 +690799,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022337 entorhinal cortex layer 2 - + - + nlx @@ -691461,7 +690853,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Superficial region of layer 2 of the piriform cortex characterized by a less dense packing of cells and a concentration of semilunar cell bodies. NLXANAT:091007 layer 2a of piriform cortex @@ -691471,7 +690863,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( piriform cortex layer 2a - + @@ -691484,7 +690876,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nlx @@ -691519,14 +690911,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Deeper of two subdivisions of piriform layer 2 characterized by more densely packed cell bodies dominated by pyramidal cell bodies. NLXANAT:091008 UBERON:0022341 piriform cortex layer 2b - + @@ -691539,7 +690931,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nlx @@ -691555,7 +690947,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:277810 NLXANAT:1008003 DG middle stratum moleculare @@ -691563,14 +690955,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022346 dentate gyrus molecular layer middle - + - + nlx @@ -691592,7 +690984,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Inner third of the dentate gyrus. FMA:277812 NLXANAT:1008004 @@ -691601,14 +690993,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022347 dentate gyrus molecular layer inner - + - + nlx @@ -691636,7 +691028,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLXANAT:1008005 enclosed blade of stratum granulare extrapyramidal blade dentate gyrus granule cell layer @@ -691646,14 +691038,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022348 dentate gyrus granule cell layer inner blade - + - + nlx @@ -691693,7 +691085,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLXANAT:1008006 exposed blade of stratum granulare infrapyramidal blade dentate gyrus granule cell layer @@ -691703,14 +691095,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022349 dentate gyrus granule cell layer outer blade - + - + nlx @@ -691862,7 +691254,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Component of the orbtial frontal cortex. The rostral boundary is the first slice where the medial orbital gyrus became visible whereas the caudal boundary is the disappearance of the medial orbital gyrus/gyrus rectus. The medial and lateral boundaries are the cingulate cortex on the u2018inflatedu2019 surface and the medial bank of the superior frontal gyrus (or the cingulate gyrus when visible) respectively (Christine Fennema-Notestine). frontal medial cortex @@ -691872,14 +691264,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022352 medial orbital frontal cortex - + - + NIFSTD @@ -691913,7 +691305,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Component of the cingulate cortex. The rostral and caudal extent were the caudal anterior and the isthmus divisions of the cingulate cortex respectively. The medial and lateral boundaries were the corpus callosum and as the superior frontal gyrus and/or paracentral lobule respectively (Christine Fennema-Notestine). check relationship to gyrus. See https://github.com/obophenotype/uberon/issues/626 posterior cingulate @@ -691927,14 +691319,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022353 posterior cingulate cortex - + - + NIFSTD @@ -692505,8 +691897,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + DHBA:146034872 FMA:71037 @@ -692516,24 +691908,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( paracingulate gyrus - + - + - + FMA - + DHBA @@ -692573,7 +691965,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The second order neuron fibers of the corticopontocerebellar tracts that cross to the other side of the pons and run within the middle cerebellar peduncles, from the pons to the contralateral cerebellum. DHBA:12769 HBA:265505470 @@ -692588,14 +691980,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022421 pontocerebellar tract - + - + DHBA @@ -692702,7 +692094,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of neurons embedded in the pontine central gray of the pontine tegmentum. Located dorsal to the internal genu of the facial nerve, it is found in the human ( Paxinos-2012 ), the macaque ( Paxinos-2009a ), the rat ( Swanson-2004 ), and the mouse ( Franklin-2008 ). Functionally it is part of the dorsal pontine gray of the subcortical motor system ( Swanson-2004 ). DHBA:12662 DMBA:17190 @@ -692712,14 +692104,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022424 supragenual nucleus of pontine tegmentum - + - + DHBA Neuronames-def @@ -692749,7 +692141,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:15541 @@ -692758,14 +692150,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022425 anterior corona radiata - + - + DHBA @@ -692794,7 +692186,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:15542 superior portion of corona radiata @@ -692802,14 +692194,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022426 superior corona radiata - + - + DHBA @@ -692832,7 +692224,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:15543 posterior portion of corona radiata @@ -692840,14 +692232,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022427 posterior corona radiata - + - + DHBA @@ -693036,7 +692428,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Part of the superior olivary complex of nuclei in the caudal pontine tegmentum, situated within the trapezoid body in humans. (Brodal, Neurological Anatomy, 3rd edition, 1981, pg 617). In many species, it comprises a medial superior olivary nucleus and a lateral superior olivary nucleus. Wikipedia includes Medial nucleus of the trapezoid body. Wikipedia:Superior_olivary_complex#Primary_nuclei many sources refer to this simply as the 'superior olive' or the 'superior olivary nucleus'. However, this is confusing as superior olive is sometimes used to denote the full SOC, which includes periolvary nuclei[https://github.com/obophenotype/uberon/issues/631] @@ -693050,14 +692442,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022434 primary superior olive - + - + NIFSTD @@ -693080,7 +692472,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nuclei periolivares peri-olivary nuclei DHBA:15561 @@ -693092,14 +692484,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022437 dorsal periolivary nucleus - + - + Wikipedia @@ -693135,21 +692527,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Component of the cingulate cortex. The rostral boundary was the first appearance of the cingulate sulcus (inferior to the superior frontal sulcus) whereas the caudal boundary was the first appearance of the genu of the corpus callosum. The medial boundary was the medial aspect of the cortex. The supero-lateral boundary was the superior frontal gyrus whereas the infero-lateral boundary was defined as the medial division of the orbitofrontal gyrus (Christine Fennema-Notestine). BIRNLEX:975 rostral anterior cingulate cortex UBERON:0022438 rostral anterior cingulate cortex - + - + NIFSTD @@ -693172,7 +692564,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A part of the entorhinal area defined on the basis of connectivity. It is the rostral portion, which receives a projection from the olfactory bulb (Price-90)-Adapted from Brain Info. BIRNLEX:2705 neuronames:2274 @@ -693180,14 +692572,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022453 olfactory entorhinal cortex - + - + NIFSTD @@ -693210,21 +692602,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of structures defined by connectivity, namely, structures that receive axons from the olfactory bulb. They include the anterior olfactory nucleus, the anterior perforated substance, the rostral part of the medial amygdaloid nucleus (anterior cortical nucleus of amygdala), and structures in the anterior part of the parahippocampal gyrus, namely, the prepyriform area, most of the periamygdaloid area, and the rostral part of the entorhinal area (Price-90). Note that some authors have regarded the olfactory bulb itself as the primary olfactory area and the areas to which it projects as secondary (Anthoney-94). In the mouse (Dong-2004) and the rat (Swanson-2004), olfactory areas include the olfactory bulb, accessory olfactory bulb, anterior olfactory nucleus, tenia tecta, prepyriform area, postpiriform transition area, piriform amygdaloid area, nucleus of lateral olfactory tract, and cortical amygdaloid area. BIRNLEX:2706 primary olfactory areas UBERON:0022469 primary olfactory cortex - + - + NIFSTD @@ -693276,21 +692668,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Component of the parietal lobe. The rostral boundary of the pericalcarine cortex was the first appearance of the calcarine sulcus whereas the caudal boundary was the most posterior coronal slice where the calcarine sulcus was visualized. The medial and lateral boundaries were the medial portion of the temporal and occipital cortices and the inferomedial end of the calcarine sulcus respectively (Christine Fennema-Notestine). BIRNLEX:1059 pericalcarine cortex UBERON:0022534 pericalcarine cortex - + - + NIFSTD @@ -693442,7 +692834,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1176 UMLS:C0228391 neuronames:461 @@ -693450,14 +692842,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022649 habenulo-interpeduncular tract of diencephalon - + - + ZFA @@ -693569,7 +692961,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1223 UMLS:C0152301 orbital gyri complex @@ -693577,14 +692969,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022695 orbital gyri complex - + - + NIFSTD @@ -693626,21 +693018,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Component of the orbtial frontal cortex The rostral boundary is the first slice where the lateral orbital gyrus is apparent with the frontomarginal sulcus whereas the caudal boundary is the disappearance of the lateral orbital gyrus. The medial and lateral boundaries are the midpoint of the olfactory sulcus and the lateral bank of the lateral orbital sulcus and/or the circular insular sulcus respectively (Christine Fennema-Notestine). BIRNLEX:1244 lateral orbital frontal cortex UBERON:0022716 lateral orbital frontal cortex - + - + NIFSTD @@ -693663,21 +693055,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1258 transverse frontopolar gyri complex transverse frontopolar gyri UBERON:0022730 transverse frontopolar gyri complex - + - + NIFSTD @@ -694052,7 +693444,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The reticulospinal tract (or anterior reticulospinal tract) is an extrapyramidal motor tract which travels from the reticular formation. BIRNLEX:1471 UMLS:C0175558 @@ -694062,7 +693454,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0022943 reticulospinal tract - + @@ -694075,7 +693467,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NIFSTD @@ -694326,7 +693718,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1622 HBA:4447 neuronames:851 @@ -694336,14 +693728,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023094 posterodorsal nucleus of medial geniculate body - + - + NIFSTD @@ -694540,7 +693932,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:2649 FMA:72610 UMLS:C0175539 @@ -694550,14 +693942,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023378 medullary anterior horn - + - + FMA @@ -694582,7 +693974,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:2662 HBA:9661 UMLS:C0175521 @@ -694596,14 +693988,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023390 medial subnucleus of solitary tract - + - + NIFSTD @@ -695220,7 +694612,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -695239,14 +694631,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023740 habenulo-interpeduncular tract of midbrain - + - + NIFSTD @@ -695264,7 +694656,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:906 UMLS:C0175321 intermediate part of hypophysis @@ -695275,14 +694667,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023752 intermediate part of hypophysis - + - + NIFSTD @@ -695342,7 +694734,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A composite structure of the temporal lobe that includes the subiculum, the presubiculum and the parasubicular area (Amaral-90). BIRNLEX:944 @@ -695353,14 +694745,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( subicular complex - + - + NIFSTD @@ -695532,21 +694924,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An area of the brain that locates at the interception of temporal and parietal cortices (at the posterior end of the Sylvian fissure). NLX:144255 temporoparietal junction UBERON:0023852 temporoparietal junction - + - + NIFSTD @@ -695593,21 +694985,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLX:144265 primary somatosensory cortex lamina VI primary somatosensory cortex lamina VI UBERON:0023859 primary somatosensory cortex layer 6 - + - + NIFSTD @@ -695629,7 +695021,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A portion of the superior temporal gyrus near the temporal pole in the human. HBA:4177 @@ -695642,14 +695034,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + NIFSTD @@ -695696,20 +695088,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLX:22533 medial ventral tegmental area UBERON:0023865 medial ventral tegmental area - + - + NIFSTD @@ -695725,8 +695117,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + Part of olfactory tubercle defined by dense aggregations of granule cells. NLX:50741 islands of calleja of olfactory tubercle @@ -695734,24 +695126,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023867 islands of Calleja of olfactory tubercle - + - + - + NIFSTD - + NIFSTD @@ -695779,7 +695171,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Regional part of telencephalon; the most prominent of the islands of Calleja located medially in the nucleus accumbens (adapted from Braininfo.org). DHBA:10359 MBA:489 @@ -695792,14 +695184,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0023868 isla magna of Calleja - + - + NIFSTD @@ -695899,21 +695291,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Superficial part of plexiform layer (layer 1) of piriform cortex that receives afferents from the olfactory bulb by way of the lateral olfactory tract. NLXANAT:091004 piriform cortex layer 1a UBERON:0023900 piriform cortex layer 1a - + - + NIFSTD @@ -695936,21 +695328,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Deeper part of the plexiform (layer 1) of piriform cortex characterized by projection of association fibers from other parts of the piriform cortex and other olfactory areas. NLXANAT:091005 piriform cortex layer 1b UBERON:0023901 piriform cortex layer 1b - + - + NIFSTD @@ -696371,21 +695763,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Part of bed nucleus of stria terminalis, comprising a distinct, large, egg-shaped collection of neurons that, together with the juxtacapsular (Ju) and rhomboid (Rh) nuclei, encompass the anterolateral area of the BST (Ju and Swanson, 1989). NLXANAT:1005035 bed nuclei of the stria terminalis oval nucleus UBERON:0023958 bed nuclei of the stria terminalis oval nucleus - + - + NIFSTD @@ -696407,21 +695799,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Central cervical spinocerebellar tract. NLXANAT:1010018 central cervical spinocerebellar tract UBERON:0023983 central cervical spinocerebellar tract - + - + NIFSTD @@ -696443,21 +695835,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Originates from cells rostral to Clarke's column and sends uncrossed axons through the lateral funiculus to the cerebellum. It reaches the cerebellum partly through the brachium conjunctivum and partly through the restiform body, terminating bilaterally in the anterior lobe of the cerebellum. NLXANAT:1010019 rostral spinocerebellar tract UBERON:0023984 rostral spinocerebellar tract - + - + NIFSTD @@ -696839,20 +696231,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLXANAT:20081247 rostral portion of the medial accessory olive UBERON:0024043 rostral portion of the medial accessory olive - + - + NIFSTD @@ -696999,7 +696391,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Posterior division of the supraoptic nucleus, formed by the ascension of the optic tract splitting the nucleus into two regions. The tuberal SON lies along the posterior tuber cinereum of the hypothalamus. In some species, some neurons lie under the optic chiasm. NLXANAT:20090311 tuberal supraoptic nucleus @@ -697007,14 +696399,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0024079 tuberal supraoptic nucleus - + - + NIFSTD @@ -697103,7 +696495,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The basis pontis is the anterior portion of the pons. NLXANAT:20090704 Wikipedia:Basilar_part_of_pons @@ -697111,14 +696503,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0024110 basis pontis - + - + NIFSTD @@ -697271,7 +696663,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1064 FMA:274414 neuronames:842 @@ -697279,14 +696671,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0024183 inferior transverse frontopolar gyrus - + - + NIFSTD @@ -697313,21 +696705,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1074 neuronames:823 medial transverse frontopolar gyrus UBERON:0024193 medial transverse frontopolar gyrus - + - + NIFSTD @@ -697344,7 +696736,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1082 FMA:274408 neuronames:1 @@ -697352,14 +696744,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0024201 superior transverse frontopolar gyrus - + - + NIFSTD @@ -698100,13 +697492,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1789 left sub-lobar region UBERON:0024900 left sub-lobar region - + @@ -698119,7 +697511,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NIFSTD @@ -698136,13 +697528,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1790 right sub-lobar region UBERON:0024901 right sub-lobar region - + @@ -698155,7 +697547,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NIFSTD @@ -699436,21 +698828,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NLXANAT:20081237 paravermis parts of the cerebellar cortex pars intermedia UBERON:0025677 paravermis parts of the cerebellar cortex - + - + cjm @@ -701160,8 +700552,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A superficial feature of the parietal lobe. It is the portion of the superior temporal sulcus that extends into the angular gyrus (Ono-90). (NN). BIRNLEX:4012 HBA:9384 @@ -701170,24 +700562,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0026725 angular sulcus - + - + - + NIFSTD - + NIFSTD @@ -701670,7 +701062,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + lateral eminence BIRNLEX:994 UMLS:C0262266 @@ -701679,14 +701071,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0027109 lateral eminence of hypophysis - + - + NIFSTD @@ -701993,7 +701385,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + consider merging DHBA:12384 @@ -702004,14 +701396,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( paravermis lobule area - + - + NIFSTD @@ -702357,21 +701749,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1130 posterior superior frontal sulcus UBERON:0027513 posterior superior frontal sulcus - + - + NIFSTD @@ -702584,7 +701976,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BIRNLEX:1338 neuronames:838 anterior superior frontal sulcus @@ -702594,14 +701986,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0027716 anterior superior frontal sulcus - + - + NIFSTD @@ -702927,7 +702319,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A projecting portion of the spiral ligament of the cochlea, bounding the lower edge of the stria vascularis and containing within it a blood vessel, the vas prominens. spiral prominence BIRNLEX:2532 @@ -702941,14 +702333,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0028194 spiral prominence of cochlear duct - + - + MA @@ -705528,7 +704920,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Composite sulcus of the frontal lobe of the macaque. Located on the dorsolateral surface, it consists of the superior ramus of the arcuate sulcus (macaque), the inferior ramus of the arcuate sulcus and the spur of the arcuate sulcus (macaque) (neuronames:2379). NLX:153910 @@ -705541,14 +704933,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034671 arcuate sulcus - + - + NIFSTD @@ -705638,7 +705030,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A cytoarchitecturally defined portion of the periamygdalar area and the cortical amygdalar nucleus at the caudal extreme of the amygdala. All authors regard it as occupying the caudal third of the amygdala, which abuts the hippocampal formation. In the human ( Mai-1997 ) and the macaque ( Amaral-1992 ) it is located close to the medial surface of the temporal lobe; it is bounded internally by the posterior cortical amygdalar nucleus and the temporal horn of the lateral ventricle. In the rat ( Swanson-2004 ) and mouse ( Hof-2000 ) it is bounded largely by the posterior cortical amygdalar nucleus and the accessory basal nucleus (known as the basomedial nucleus of the amygdala in rodents); the stria terminalis separates it from the ventricle. According to some authors the amygdalohippocampal area extends anteriorly to occupy the caudal half of the amygdala. These authors divide the area into two or three parts, which in the human ( Olmos-2004 ), the rat ( Paxinos-2009b ), and the mouse ( Franklin-2008 ) are named on the basis of location: anterolateral, posterolateral and posteromedial parts. In the macaque ( Paxinos-2009a ) the rostral portion of the area is divided into two parts on the basis of cellular morphology: magnocellular and parvicellular parts. Some authors refer to the area in rodents as the 'posterior amygdalar nucleus' ( Swanson-2004; Hof-2000 ).[neuronames:2028] @@ -705665,14 +705057,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( amygdalohippocampal area - + - + DHBA @@ -705785,7 +705177,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12025 FMA:61949 @@ -705811,14 +705203,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034676 forceps major of corpus callosum - + - + DHBA @@ -705940,7 +705332,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12024 FMA:61944 SCTID:369199005 @@ -705965,14 +705357,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034678 forceps minor of corpus callosum - + - + DHBA @@ -706243,8 +705635,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The cremasteric artery (external spermatic artery) is a branch of the Inferior epigastric artery which accompanies the spermatic cord, and supplies the Cremaster and other coverings of the cord, anastomosing with the testicular artery (internal spermatic artery in older texts). (In the female, the cremesteric artery is very small and accompanies the round ligament.). FMA:70192 @@ -706256,24 +705648,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( cremasteric artery - + - + - + FMA - + FMA @@ -706770,7 +706162,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -706783,14 +706175,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034710 spinal cord ventricular layer - + - + EHDAA2 @@ -707327,7 +706719,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The pharyngeal nerve (pterygopalatine nerve) is a small branch arising from the posterior part of the pterygopalatine ganglion. It passes through the pharyngeal canal with the pharyngeal branch of the maxillary artery, and is distributed to the mucous membrane of the nasal part of the pharynx, behind the auditory tube. FMA:52731 SCTID:58267004 @@ -707340,14 +706732,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034725 pterygopalatine nerve - + - + FMA @@ -707439,7 +706831,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -707457,14 +706849,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( vestibular bulb artery - + - + FMA @@ -707742,7 +707134,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -707763,14 +707155,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034736 coracoclavicular ligament - + - + FMA @@ -707792,8 +707184,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The inferior longitudinal fasciculus connects the temporal lobe and occipital lobe, running along the lateral walls of the inferior and posterior cornua of the lateral ventricle. The existence of this fasciculus independent from the occipitotemporal fasciculus has been questioned for the human being, such that it has been proposed that the term inferior longitudinal fasciculus be replaced by the term 'occipitotemporal projection'. DHBA:10580 FMA:77632 @@ -707809,24 +707201,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034743 inferior longitudinal fasciculus - + - + - + HBA - + DHBA @@ -707914,7 +707306,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12043 FMA:76976 @@ -707929,14 +707321,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034746 anterior thalamic radiation - + - + DHBA @@ -708067,7 +707459,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12052 FMA:61957 SCTID:362363008 @@ -708084,14 +707476,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034749 retrolenticular part of internal capsule - + - + DHBA FMA @@ -708208,7 +707600,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The part of the auditory cortex that is located on the superior temporal gyrus in the temporal lobe and receives point-to-point input from the ventral division of the medial geniculate complex. DHBA:10236 FMA:272953 @@ -708223,14 +707615,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034751 primary auditory cortex - + - + cjm @@ -708283,7 +707675,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The part of the auditory cortex that receive more diffuse input from the belt areas of the medial geniculate complex. DHBA:10239 @@ -708300,14 +707692,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034752 secondary auditory cortex - + - + cjm @@ -708423,8 +707815,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The occipitofrontal fasciculus passes backward from the frontal lobe, along the lateral border of the caudate nucleus, and on the medial aspect of the corona radiata; its fibers radiate in a fan-like manner and pass into the occipital and temporal lobes lateral to the posterior and inferior cornua. DHBA:10588 HBA:9269 @@ -708434,24 +707826,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034754 occipitofrontal fasciculus - + - + - + HBA - + DHBA @@ -708892,7 +708284,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The anterior extremity of the Parahippocampal gyrus is recurved in the form of a hook, the uncus, which is separated from the apex of the temporal lobe by a slight fissure, the incisura temporalis. Although superficially continuous with the hippocampal gyrus, the uncus forms morphologically a part of the rhinencephalon. The term uncus was coined by Felix Vicq dbAzyr (1748b1794). DHBA:12165 @@ -708908,14 +708300,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( uncus of parahippocampal gyrus - + - + DHBA @@ -708951,20 +708343,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:266441267 CA1U UBERON:0034774 uncal CA1 - + - + DHBA @@ -708981,20 +708373,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:266441311 CA2U UBERON:0034775 uncal CA2 - + - + DHBA @@ -709011,20 +708403,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:266441355 CA3U UBERON:0034776 uncal CA3 - + - + DHBA @@ -709041,20 +708433,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:11275 CA1R UBERON:0034777 rostral CA1 - + - + DHBA @@ -709071,20 +708463,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:11285 CA2R UBERON:0034778 rostral CA2 - + - + DHBA @@ -709101,20 +708493,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:11295 CA3R UBERON:0034779 rostral CA3 - + - + DHBA @@ -709131,20 +708523,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:11280 CA1C UBERON:0034780 caudal CA1 - + - + DHBA @@ -709161,20 +708553,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:11290 CA2C UBERON:0034781 caudal CA2 - + - + DHBA @@ -709191,20 +708583,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:11301 CA3C UBERON:0034782 caudal CA3 - + - + DHBA @@ -711098,8 +710490,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -711112,24 +710504,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034875 future pituitary gland - + - + - + EMAPA - + Wikipedia @@ -711156,8 +710548,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -711172,24 +710564,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034876 future neurohypophysis - + - + - + EMAPA - + EMAPA @@ -711330,32 +710722,32 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + NLX:152661 primary motor cortex lamina 1 primary motor cortex lamina I UBERON:0034888 primary motor cortex layer 1 - + - + - + NIFSTD - + NIFSTD @@ -711377,7 +710769,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The posterior parietal cortex is a portion of the parietal lobe which manipulates mental images, and integrates sensory and motor portions of the brain. Some sources say that it consists of Brodmann area 5 and Brodmann area 7. Other sources say it is only area 7. DHBA:10214 Wikipedia:Posterior_parietal_cortex @@ -711385,14 +710777,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034889 posterior parietal cortex - + - + DHBA @@ -711661,7 +711053,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:10386 NLX:54921 @@ -711673,14 +711065,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034894 lateral nucleus of stria terminalis - + - + NIFSTD @@ -711721,7 +711113,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:10385 NLX:80623 medial subdivision of BNST @@ -711731,14 +711123,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034895 medial nucleus of stria terminalis - + - + NIFSTD @@ -711774,8 +711166,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + DHBA:266441591 FMA:62071 MBA:892 @@ -711787,24 +711179,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034896 ansa peduncularis - + - + - + FMA - + DHBA @@ -711842,28 +711234,26 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + The thickened ridge of bone that contains the tooth sockets on the premaxilla. AAO:0000397 pars dentalis of premaxilla UBERON:0034898 alveolar ridge of premaxilla - - - - - - - - - AAO - @@ -712249,7 +711639,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12184 DMBA:16585 neuronames:1176 @@ -712259,14 +711649,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034910 medial pretectal nucleus - + - + ISBN:0471888893 @@ -712297,7 +711687,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + consider merging with olivary; however, Butler and Hodos treat as distinct within Eutherians DHBA:12187 EMAPA:37920 @@ -712308,14 +711698,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034918 anterior pretectal nucleus - + - + ISBN:0471888893 @@ -712342,7 +711732,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -712453,7 +711842,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - @@ -712765,7 +712153,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The arcuate artery of the foot (metatarsal artery) arises a little anterior to the lateral tarsal artery; it passes lateralward, over the bases of the metatarsal bones, beneath the tendons of the Extensor digitorum brevis, its direction being influenced by its point of origin; and its anastomoses with the lateral tarsal and lateral plantar arteries. This vessel gives off the second, third, and fourth dorsal metatarsal arteries. It is not present in all individuals. FMA:44594 @@ -712775,14 +712163,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( arcuate artery of foot - + - + FMA @@ -712899,7 +712287,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -712910,14 +712298,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034930 auricular feather - + - + EDITOR_NOTE request more specific terms from PATO @@ -712946,8 +712334,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -712983,24 +712371,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034931 perforant path - + - + - + HBA - + DHBA @@ -713170,7 +712558,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Corrugated anterior region of ciliary body where ciliary processes arise. FMA:58431 SCTID:280859006 @@ -713179,14 +712567,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034935 pars plicata of ciliary body - + - + FMA @@ -713214,7 +712602,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Flattened posterior region of ciliary body. FMA:58480 NCIT:C33219 @@ -713224,14 +712612,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034936 pars plana of ciliary body - + - + FMA @@ -713842,7 +713230,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A population of lymphatic endothelial cell precursors that will form the lymph vessels. NCIT:C34262 UMLS:C1514424 @@ -713850,14 +713238,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034953 embryonic lymph sac - + - + VHOG @@ -714060,7 +713448,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -714082,14 +713470,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( superficial epigastric artery - + - + FMA @@ -714262,7 +713650,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A nonchromaffin paraganglion located in the wall of the jugular bulb. FMA:50848 MESH:D005924 @@ -714275,14 +713663,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034972 jugular body - + - + cjm @@ -714311,7 +713699,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A cluster of neuroendocrine cells derived from neural crest. Paraganglia may be chromaffin or nonchromaffin. corresponding portion of CL needs fixed FMA:15648 @@ -714321,7 +713709,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034978 paraganglion (generic) - + @@ -714334,7 +713722,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Wikipedia @@ -714382,19 +713770,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + bulb of jugular vein UBERON:0034980 jugular bulb - + - + FMA @@ -714725,7 +714113,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:35125 FMA:77608 MA:0002918 @@ -714738,14 +714126,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034989 amygdalopiriform transition area - + - + MA @@ -714779,8 +714167,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + DMBA:16000 EMAPA:35128 @@ -714791,24 +714179,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( anterior cortical amygdaloid nucleus - + - + - + EMAPA - + DMBA @@ -714825,8 +714213,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + EMAPA:35165 FMA:84344 HBA:4427 @@ -714834,24 +714222,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034993 basal ventral medial nucleus of thalamus - + - + - + HBA - + EMAPA @@ -715010,7 +714398,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DMBA:15999 EMAPA:35699 MA:0002929 @@ -715024,14 +714412,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0034999 posterolateral cortical amygdaloid nucleus - + - + EMAPA @@ -715078,7 +714466,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DMBA:15950 EMAPA:35700 MA:0002930 @@ -715091,14 +714479,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035001 posteromedial cortical amygdaloid nucleus - + - + EMAPA @@ -715139,19 +714527,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:35702 UBERON:0035004 preputial swelling - + - + EMAPA @@ -715172,20 +714560,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:29220 prepuce of male UBERON:0035005 preputial swelling of male - + - + EMAPA @@ -715212,20 +714600,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:30478 prepuce of female UBERON:0035006 preputial swelling of female - + - + EMAPA @@ -716173,8 +715561,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The superior rectal artery (superior hemorrhoidal artery) is an artery that descends into the pelvis to supply blood to the rectum. FMA:14832 @@ -716191,24 +715579,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + - + FMA - + FMA @@ -716265,7 +715653,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The deep temporal arteries, two in number, anterior and posterior, ascend between the Temporalis and the pericranium. They supply the muscle, and anastomose with the middle temporal artery. The anterior communicates with the lacrimal artery by means of small branches which perforate the zygomatic bone and great wing of the sphenoid. FMA:49742 SCTID:147965009 @@ -716278,14 +715666,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035041 deep temporal artery - + - + FMA @@ -716337,7 +715725,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The middle temporal artery arises immediately above the zygomatic arch, and, perforating the temporal fascia, gives branches to the Temporalis, anastomosing with the deep temporal branches of the internal maxillary. It occasionally gives off a zygomaticoC6rbital branch, which runs along the upper border of the zygomatic arch, between the two layers of the temporal fascia, to the lateral angle of the orbit. FMA:49666 @@ -716348,14 +715736,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( middle temporal artery - + - + FMA @@ -716422,37 +715810,37 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + - + Deepest layer of olfactory cortex. NLX:152611 UBERON:0035044 olfactory cortex layer 3 - + - + - + nlx - + NIFSTD @@ -716979,12 +716367,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + In Anolis, This muscle mostly originates via fleshy fibers from the ventrolateral aspect of the ilium and the ventral aspect of the transverse processes of Ca1-8 (note: the origin from Ca1 is tendinous). The fibers of m. ischiocaudalis join those of m. cocygeus inferior in the ventral midline at the level of Ca3-4 (in females) and Ca5-6 (in males)[PMID:22753107] M. caudofemoralis brevis @@ -716992,16 +716388,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035082 caudofemoralis brevis - - - - - - - - - fossa on lower edge of ilium - @@ -717933,7 +717319,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The perineal raphe extends from the anus, through the mid-line of the scrotum (scrotal raphe) and upwards through the posterior mid-line aspect of the penis (penile raphe). It is the result of a fetal developmental phenomenon whereby the scrotum (the developmental equivalent of the labia in females) and penis close toward the midline and fuse. The resulting ridge of tissue is evident as the perineal raphe FMA:20244 @@ -717944,14 +717330,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035106 raphe of perineum - + - + Wikipedia @@ -717988,7 +717374,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The temporal fascia covers the Temporalis muscle. It is a strong, fibrous investment, covered, laterally, by the Auricularis anterior and superior, by the galea aponeurotica, and by part of the Orbicularis oculi. The superficial temporal vessels and the auriculotemporal nerve cross it from below upward. Above, it is a single layer, attached to the entire extent of the superior temporal line; but below, where it is fixed to the zygomatic arch, it consists of two layers, one of which is inserted into the lateral, and the other into the medial border of the arch. A small quantity of fat, the orbital branch of the superficial temporal artery, and a filament from the zygomatic branch of the maxillary nerve, are contained between these two layers. It affords attachment by its deep surface to the superficial fibers of the Temporalis. FMA:53996 MFMO:0000105 @@ -718000,14 +717386,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Request new term but the definition needs revision. temporalis fascia - + - + cjm @@ -718221,21 +717607,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:617 mediodorsal nucleus of the thalamus, central part MDc UBERON:0035113 central part of mediodorsal nucleus of the thalamus - + - + MBA @@ -718258,21 +717644,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:626 mediodorsal nucleus of the thalamus, lateral part MDl UBERON:0035114 lateral part of mediodorsal nucleus of the thalamus - + - + MBA @@ -718835,20 +718221,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:32631 hand cartilage condensation UBERON:0035128 manus cartilage element - + - + EMAPA-modified @@ -718886,20 +718272,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:32657 foot cartilage condensation UBERON:0035129 pes cartilage element - + - + EMAPA-modified @@ -718915,9 +718301,9 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - - + + + @@ -718936,34 +718322,34 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035130 auditory ossicle endochondral element - + - + - + - + MA - + PMID:11523816 - + PMID:11237469 https://github.com/obophenotype/uberon/wiki/The-neural-crest @@ -719177,19 +718563,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EMAPA:36342 UBERON:0035142 preputial space of male - + - + EMAPA @@ -720133,7 +719519,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Clinical esophageal segment composed of smooth muscle. It corresponds to the inferior part of the lower third topographic segment of the esophagus. FMA:9397 NCIT:C12252 @@ -720148,14 +719534,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035177 abdominal part of esophagus - + - + FMA @@ -720209,7 +719595,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The sigmoid arteries, two or three in number, run obliquely downward and to the left behind the peritoneum and in front of the Psoas major, ureter, and internal spermatic vessels. Their branches supply the lower part of the descending colon, the iliac colon, and the sigmoid or pelvic colon; anastomosing above with the left colic, and below with the superior hemorrhoidal artery. FMA:14830 @@ -720224,14 +719610,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + FMA @@ -720332,7 +719718,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The plantar metatarsal arteries (digital branches) are four in number, and run forward between the metatarsal bones and in contact with the Interossei. Each divides into a pair of plantar digital arteries which supply the adjacent sides of the toes. Near their points of division each sends upward an anterior perforating branch to join the corresponding dorsal metatarsal artery. The first plantar metatarsal artery (arteria princeps hallucis) springs from the junction between the lateral plantar and deep plantar arteries and sends a digital branch to the medial side of the first toe. The digital branch for the lateral side of the fifth toe arise from the lateral plantar artery near the base of the fifth metatarsal bone. FMA:43956 NCIT:C52743 @@ -720343,14 +719729,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035195 plantar metatarsal artery - + - + FMA @@ -720432,7 +719818,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -720453,14 +719839,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035201 gastrocolic ligament - + - + FMA @@ -720666,7 +720052,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Zone of esophagus located in the thorax. FMA:9396 NCIT:C12251 @@ -720679,14 +720065,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035216 thoracic part of esophagus - + - + FMA @@ -721187,7 +720573,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A structure composed of adipose tissue lying above the pubic bone of adult women, anterior to the symphysis pubis. The mons pubis forms the anterior portion of the vulva, and limits the perineal region proximally and anteriorly. In humans, the mons pubis divides into the labia majora on either side of the furrow, known as the cleft of venus, that surrounds the labia minora, clitoris, vaginal opening, and other structures of the vulval vestibule. The fatty tissue of the mons veneris is sensitive to estrogen, causing a distinct mound to form with the onset of puberty. This pushes the forward portion of the labia majora out and away from the pubic bone The size of the mons pubis varies with the general level of hormone and body fat. After puberty it is covered with pubic hair and enlarges. @@ -721202,14 +720588,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035258 mons pubis - + - + FMA @@ -721388,7 +720774,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The superior thoracic artery (highest thoracic artery) is a small vessel normally arising from the first division of the axillary artery, but may arise from the thoracoacromial artery, itself a branch of the second division of the axillary artery. Running forward and medialward along the upper border of the pectoralis minor, the superior thoracic artery passes between it and the pectoralis major to the side of the chest. It supplies branches to the first and second intercostal spaces as well as to the superior portion of serratus anterior. It anastomoses with the internal mammary and intercostal arteries. FMA:22668 @@ -721400,14 +720786,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( superior thoracic artery - + - + FMA @@ -721554,7 +720940,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An extension of the tissue of the breast which extends into the axilla. FMA:58072 NCIT:C12305 @@ -721569,14 +720955,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035289 axillary tail of breast - + - + ncithesaurus @@ -721700,7 +721086,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An elevated zone of the sella turcica behind the chiasmatic groove[WP,modified]. FMA:54719 NCIT:C45911 @@ -721710,14 +721096,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035298 tuberculum sellae - + - + FMA @@ -722330,7 +721716,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The aspect of the kidney facing the abdominal cavity. FMA:15589 @@ -722342,14 +721728,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035368 anterior surface of kidney - + - + ncithesaurus @@ -722477,7 +721863,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + One of the semi-lunar transverse folds of the rectal wall that protrude into the anal canal. Their use seems to be to support the weight of fecal matter, and prevent its urging toward the anus, which would produce a strong urge to defecate FMA:15722 @@ -722490,14 +721876,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035377 transverse fold of rectum - + - + ncithesaurus @@ -722647,7 +722033,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -722674,14 +722060,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + ncithesaurus @@ -722941,7 +722327,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The diaphragma sellae or sellar diaphragm is the circular fold of dura mater that almost completely roofs the fossa hypophyseos in the sphenoid bone of the skull. It retains the pituitary gland in the fossa hypophyseos, with only the infundibulum of the pituitary gland passing through it. FMA:78540 NCIT:C32459 @@ -722952,14 +722338,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035416 diaphragma sellae - + - + ncithesaurus @@ -723010,7 +722396,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Branch of left coronary artery which runs perpendicular to the anterior interventricular branch of the left coronary artery on the left side of the interventricular sulcus and supplies the left side of the heart. FMA:3895 @@ -723026,14 +722412,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( circumflex branch of left coronary artery https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb - + - + FMA @@ -723069,7 +722455,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A small triangular process of dura matter beginning at the internal occipital crest just beneath the tentorium and projecting forward. FMA:83974 NCIT:C32584 @@ -723080,14 +722466,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035425 falx cerebelli - + - + ncithesaurus @@ -723129,8 +722515,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The parietal pleura that lines the mediastinum. FMA:9736 NCIT:C94820 @@ -723143,24 +722529,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035431 mediastinal pleura - + - + - + FMA - + FMA @@ -723298,7 +722684,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The lowest part of the prostate gland adjacent to the superior fascia of the urogenital diaphragm. FMA:19594 NCIT:C13087 @@ -723310,14 +722696,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( apex of prostate https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.2/assets/3d-vh-m-prostate.glb - + - + ncithesaurus @@ -723375,7 +722761,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Muscular components of the deep perineal pouch. consider obsoletion FMA:19734 @@ -723385,7 +722771,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035445 urogenital diaphragm - + @@ -723398,7 +722784,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ncithesaurus @@ -723414,7 +722800,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Clinical esophageal segment composed of skeletal muscle. It corresponds to the superior part of the upper third topographic segment of the esophagus. FMA:9395 NCIT:C12250 @@ -723428,14 +722814,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035450 cervical part of esophagus - + - + FMA @@ -723485,7 +722871,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:64171 NCIT:C32935 SCTID:361949007 @@ -723495,14 +722881,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035453 laryngeal ventricle - + - + ncithesaurus @@ -723624,7 +723010,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The angled junction where the diaphragm meets the chest wall. FMA:11355 NCIT:C32393 @@ -723635,14 +723021,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035468 costodiaphragmatic recess - + - + ncithesaurus @@ -724109,7 +723495,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Free nerve endings are widely distributed throughout the body, and are found as branches of unmyelinated, or lightly myelinated fibres grouped in bundles beneath the epithelium. As they penetrate the epithelium, they lose their myelin, and branch among the epithelial cells. Branches of one nerve may cover a wide area and overlap the territories of other nerves. The free nerve endings detect pain, touch, pressure and temperature, and are associated with C fibres. FMA:84005 @@ -724121,7 +723507,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035501 unencapsulated tactile receptor - + @@ -724134,7 +723520,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ncithesaurus @@ -724591,7 +723977,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The middle portion of the gallbladder which is distal to the gallbladder neck and proximal to the gallbladder fundus. FMA:14537 NCIT:C32647 @@ -724602,14 +723988,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035536 body of gallbladder - + - + FMA @@ -724648,7 +724034,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -724667,7 +724053,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( esophageal artery - + @@ -724680,7 +724066,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -725254,7 +724640,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -725340,7 +724726,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An unjointed, rod-like bony or cartilaginous structures that extend from distal limb joints in tetrapods. in some mammals this is found in a cartilaginous state, and articulates with the lateral border of the carpus. @@ -725350,14 +724736,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035561 styliform element - + - + DOI:10.1038/nature14423 @@ -725730,7 +725116,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A nucleus medial to the central pretectal nucleus in the periventricular zone. @@ -725743,14 +725129,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Can be subdivided into dorsal and ventral[ISBN:0471888893] periventricular pretectal nucleus - + - + ZFA @@ -725971,7 +725357,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nucleus geniculatus pretectalis @@ -725979,14 +725365,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Receives retinal input nucleus geniculatus of pretectum - + - + ISBN:0471888893 @@ -726015,7 +725401,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nucleus lentiformis mesencephali @@ -726023,14 +725409,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Receives retinal input nucleus lentiformis of pretectum - + - + ISBN:0471888893 @@ -726059,7 +725445,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nucleus posteriodorsalis @@ -726067,14 +725453,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( Receives retinal input nucleus posteriodorsalis of pretectum - + - + ISBN:0471888893 @@ -726103,20 +725489,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nucleus lentiformis thalami UBERON:0035583 nucleus lentiformis thalamus - + - + ISBN:0471888893 @@ -726139,20 +725525,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + ventral pretectal nucleus UBERON:0035584 ventral pretectal nucleus (sauropsida) - + - + ISBN:0471888893 @@ -726174,21 +725560,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + griseum tectalis tectal gray tectal grey UBERON:0035585 tectal gray nucleus (Testudines) - + - + ISBN:0471888893 @@ -726234,18 +725620,18 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + UBERON:0035587 nucleus pretectalis diffusus - + - + ISBN:0471888893 @@ -726262,19 +725648,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A nuclear complex in the ventral pretectal region. UBERON:0035588 subpretectal complex of Aves - + - + ISBN:0471888893 @@ -726322,19 +725708,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + UBERON:0035591 lateral spiriform nucleus - + - + ISBN:0471888893 @@ -726350,18 +725736,18 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + UBERON:0035592 medial spiriform nucleus - + - + ISBN:0471888893 @@ -726371,19 +725757,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + nucleus circularis UBERON:0035593 nucleus circularis of pretectum - + - + ISBN:0471888893 @@ -726467,7 +725853,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of cells located in the central part of the anterior hypothalamic nucleus in the anterior hypothalamic region of the rat ( Swanson-2004 ) and the mouse ( Paxinos-2001 ). Functionally it belongs to the magnocellular neuroendocrine cell groups of the subcortical motor system ( Swanson-2004 ). nucleus circularis MBA:432 @@ -726478,14 +725864,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( group of magnocellular elements arranged in a ring around a capillary bed. The cells are predominantly monopolar, tightly packed, and are flattened at the outer border of the ring. The entire nucleus is surrounded or encapsulated by myelinated fibers, hypothesized to be an osmoreceptor[PMID:974791] circular nucleus of antherior hypothalamic nucleus - + - + MBA @@ -726936,21 +726322,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The innermost layer of the outer root sheath. It contains cells that are morphologically and biochemically different from the inner root sheath and outer root sheath. The cells of the companion layer are more flattened than the other cells of the outer root sheath and do not contain glycogen. In addition, a novel human type II cytokeratin, K6hf, is specifically expressed in the companion layer of the hair follicle BTO:0003970 UBERON:0035609 outer root sheath companion layer - + - + BTO @@ -727055,7 +726441,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -727082,14 +726468,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035612 nasal turbinal - + - + ISBN:0073040584 @@ -727641,7 +727027,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A branch of the facial nerve that innervates the posterior auricular and intrinsic muscles of the auricle and, through its occipital branch, innervates the occipital belly of the occipitofrontal muscle. FMA:53278 SCTID:280277006 @@ -727651,14 +727037,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035647 posterior auricular nerve - + - + FMA Wikipedia @@ -727704,7 +727090,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Any nerve that innervates the pinna. EMAPA:36513 MA:0001232 @@ -727712,14 +727098,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035648 nerve innervating pinna - + - + FMA @@ -728169,7 +727555,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -728185,14 +727571,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035677 primary yolk sac cavity - + - + EHDAA2 @@ -728347,7 +727733,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2:0004525 FMA:280884 capillary plexus of liver @@ -728356,14 +727742,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035756 capillary network of liver - + - + EHDAA2 @@ -728504,7 +727890,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -728519,14 +727905,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035763 cavity of cardiac chamber - + - + FMA @@ -729096,21 +728482,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A parasympathetic ganglion located on the short ciliary nerve differentiated from the main ciliary ganglion by virtue of the fact that it had no root derived directly from the inferior trunk of the oculomotor nerve and it never attaches to this nerve. tested for and found to be present in pig, sika deer, domestic sheep, horse, cat, fox, racoon dog, marten, rat, rabbit, crab-eating macaque, japanese macaque and human[PMID:2802184] UBERON:0035776 accessory ciliary ganglion - + - + http://orcid.org/0000-0001-9114-8737 @@ -729216,8 +728602,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + @@ -729237,24 +728623,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035785 telencephalic song nucleus HVC - + - + - + Wikipedia - + GOC:mr @@ -729631,7 +729017,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -729644,7 +729030,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035806 Hensen stripe - + @@ -729657,7 +729043,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + cjm @@ -729685,20 +729071,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A nucleus in the basal ganglion of songbirds. area X UBERON:0035807 area X of basal ganglion - + - + GOC:mr @@ -729717,8 +729103,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + A specialized nucleus within the intermediate archistriatum of songbirds, required for and active during the production of learned song. BTO:0003366 RA @@ -729727,24 +729113,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035808 robust nucleus of arcopallium - + - + - + BTO - + GOC:cjm @@ -730272,8 +729658,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + Artery that runs from right to left along the greater curvature of the stomach, between the layers of the greater omentum, anastomosing with the left gastroepiploic branch of the splenic artery. FMA:14781 @@ -730291,24 +729677,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( right gastroepiploic artery - + - + - + FMA - + FMA @@ -730375,7 +729761,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Artery that runs from left to right along the greater curvature of the stomach, between the layers of the greater omentum, and anastomoses with the right gastroepiploic. FMA:14796 @@ -730394,14 +729780,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( left gastroepiploic artery - + - + FMA @@ -730475,7 +729861,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -730490,14 +729876,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035831 costal diaphragm - + - + PMID:23586979 @@ -730526,14 +729912,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + - + @@ -730553,24 +729939,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035832 caval sphincter - + - + - + left - + Pinnipedia may also be in whales @@ -731223,7 +730609,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:1070 NLX:157671 SSp-bfd5 @@ -731231,14 +730617,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035872 primary somatosensory area barrel field layer 5 - + - + MBA NIFSTD @@ -731262,21 +730648,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:981 NLX:157672 SSp-bfd1 UBERON:0035873 primary somatosensory area barrel field layer 1 - + - + MBA NIFSTD @@ -731294,7 +730680,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:201 NLX:157673 SSp-bfd2/3 @@ -731302,14 +730688,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035874 primary somatosensory area barrel field layer 2/3 - + - + MBA NIFSTD @@ -731333,7 +730719,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:1062 NLX:157674 SSp-bfd6b @@ -731341,14 +730727,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035875 primary somatosensory area barrel field layer 6b - + - + MBA NIFSTD @@ -731372,7 +730758,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:1038 NLX:157675 SSp-bfd6a @@ -731380,14 +730766,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035876 primary somatosensory area barrel field layer 6a - + - + MBA NIFSTD @@ -731411,7 +730797,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:1047 NLX:157676 SSp-bfd4 @@ -731419,14 +730805,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035877 primary somatosensory area barrel field layer 4 - + - + MBA NIFSTD @@ -731450,20 +730836,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The bone region of the epiphysis that provides underlying mechanical and physiological support for the cartilage of joint articular surfaces. subchondral bone UBERON:0035878 subchondral region of epiphysis - + - + MGI:csmith @@ -731848,13 +731234,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:1011 AUDd UBERON:0035885 dorsal auditory area - + @@ -731867,7 +731253,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -731884,13 +731270,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:22 PTLp UBERON:0035886 posterior parietal association areas - + @@ -731903,7 +731289,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -731920,13 +731306,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:312782628 VISpor UBERON:0035890 postrhinal area - + @@ -731939,7 +731325,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -731956,13 +731342,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:33 VISp6a UBERON:0035892 primary visual area, layer 6a - + @@ -731975,7 +731361,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -731992,13 +731378,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:394 VISam UBERON:0035893 anteromedial visual area - + @@ -732011,7 +731397,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732028,13 +731414,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:402 VISal UBERON:0035894 anterolateral visual area - + @@ -732047,7 +731433,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732064,13 +731450,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:409 VISl UBERON:0035895 lateral visual area - + @@ -732083,7 +731469,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732100,13 +731486,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:425 VISpl UBERON:0035897 posterolateral visual area - + @@ -732119,7 +731505,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732136,13 +731522,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:533 VISpm UBERON:0035900 posteromedial visual area - + @@ -732155,7 +731541,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732172,13 +731558,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:721 VISp4 UBERON:0035904 primary visual area, layer 4 - + @@ -732191,7 +731577,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732208,13 +731594,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:778 VISp5 UBERON:0035906 primary visual area, layer 5 - + @@ -732227,7 +731613,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732244,13 +731630,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:821 VISp2/3 UBERON:0035907 primary visual area, layer 2/3 - + @@ -732263,7 +731649,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732280,13 +731666,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:233 VISal5 UBERON:0035908 anterolateral visual area, layer 5 - + @@ -732299,7 +731685,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732316,13 +731702,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:257 VISpm6a UBERON:0035909 posteromedial visual area, layer 6a - + @@ -732335,7 +731721,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732352,13 +731738,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:312782640 VISpor4 UBERON:0035911 postrhinal area, layer 4 - + @@ -732371,7 +731757,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732388,13 +731774,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:417 VISrl UBERON:0035912 rostrolateral visual area - + @@ -732407,7 +731793,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732424,13 +731810,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:433 VISam5 UBERON:0035913 anteromedial visual area, layer 5 - + @@ -732443,7 +731829,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732460,13 +731846,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:501 VISpm4 UBERON:0035914 posteromedial visual area, layer 4 - + @@ -732479,7 +731865,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732496,13 +731882,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:573 VISl4 UBERON:0035915 lateral visual area, layer 4 - + @@ -732515,7 +731901,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732532,13 +731918,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:613 VISl5 UBERON:0035916 lateral visual area, layer 5 - + @@ -732551,7 +731937,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732568,13 +731954,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:678 AUDd4 UBERON:0035917 dorsal auditory area, layer 4 - + @@ -732587,7 +731973,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732604,13 +731990,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:74 VISl6a UBERON:0035918 lateral visual area, layer 6a - + @@ -732623,7 +732009,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732640,13 +732026,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:869 VISpl4 UBERON:0035919 posterolateral visual area, layer 4 - + @@ -732659,7 +732045,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732676,13 +732062,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:312782616 VISrl5 UBERON:0035920 rostrolateral area, layer 5 - + @@ -732695,7 +732081,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -732801,7 +732187,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The spreading out of the fibers of the corpus callosum in the centrum semiovale of each cerebral hemisphere. DHBA:12026 FMA:77693 @@ -732817,7 +732203,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035924 radiation of corpus callosum - + @@ -732830,7 +732216,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -732888,7 +732274,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:13227 FMA:83779 HBA:9399 @@ -732913,7 +732299,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035925 central sulcus of insula - + @@ -732926,7 +732312,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -733239,7 +732625,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12082 FMA:277107 HBA:265505286 @@ -733247,14 +732633,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035931 sagittal stratum - + - + DHBA @@ -733271,8 +732657,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + FMA:273508 HBA:4071 @@ -733286,11 +732672,11 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.4/assets/3d-allen-m-brain.glb - + - + @@ -733303,13 +732689,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA - + FMA @@ -733344,7 +732730,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The junction of the precentral gyrus and postcentral gyrus on the medial surface of the cerebral cortex. It lies across the boundary between the frontal lobe and the parietal lobe. BTO:0005601 FMA:77534 @@ -733357,7 +732743,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035933 paracentral lobule - + @@ -733370,7 +732756,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -733393,8 +732779,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + FMA:273511 HBA:4125 @@ -733404,11 +732790,11 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( posterior segment of paracentral lobule - + - + @@ -733421,13 +732807,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA - + FMA @@ -733499,8 +732885,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The arcuate fasciculus (Latin, curved bundle) is the neural pathway connecting the posterior part of the temporoparietal junction with the frontal cortex in the brain and is now considered as part of the Superior longitudinal fasciculus. DHBA:10569 FMA:276650 @@ -733518,24 +732904,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035937 arcuate fasciculus - + - + - + FMA - + DHBA @@ -733604,7 +732990,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12728 FMA:72611 HBA:265505538 @@ -733618,7 +733004,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035938 amiculum of inferior olive - + @@ -733631,7 +733017,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -733706,7 +733092,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:70663 HBA:9588 neuronames:729 @@ -733721,7 +733107,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035940 central medullary reticular nuclear complex - + @@ -733734,7 +733120,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -733868,7 +733254,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A temporal boundary connecting two life cycle stages that follow in immediate succession. A temporal boundary is an abstract, instantaneous entity. @@ -734059,7 +733445,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -734074,22 +733460,22 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035956 epididymal lumen - + - + FMA The lumen of the epididymis. - GOC:DOS https://github.com/obophenotype/uberon/issues/1209 + https://orcid.org/0000-0002-7073-9172 @@ -734237,7 +733623,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Supravaginal portion of cervix: the part of the cervix uteri that does not protrude into the vagina. BTO:0001851 @@ -734246,14 +733632,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035962 supravaginal part of cervix - + - + FMA @@ -734427,7 +733813,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The perforated part of the sclera through which pass the axons of the retinal ganglion cells. BTO:0004277 @@ -734440,7 +733826,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( scleral lamina cribrosa - + @@ -734453,7 +733839,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + BTO @@ -734489,8 +733875,8 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - + + The mucous membrane apical to the attached gingiva. BTO:0004046 @@ -734499,24 +733885,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( alveolar mucosa - + - + - + BTO - + BTO @@ -734660,7 +734046,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + On the medial wall of the posterior cornu of the lateral ventricle is a longitudinal eminence, the calcar avis (hippocampus minor), which is an involution of the ventricular wall produced by the calcarine fissure. It is sometimes visible on ultrasonogram. BTO:0004691 DHBA:12095 @@ -734682,14 +734068,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035970 calcar avis of the lateral ventricle - + - + BTO @@ -734773,7 +734159,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Division of subicular cortex characterized by projections from the anterodorsal thalamic nucleus and to a lesser extent the anteroventral nucleus, bordered ventrally and laterally by the presubiculum and dorsally and medially by the retrosplenial granular a cortex.. The border is characterized by an abrupt change in the cyto- and chemoarchitecture. MBA:1037 NLX:144245 @@ -734783,7 +734169,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035971 postsubiculum - + @@ -734796,7 +734182,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -734825,7 +734211,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of nerve cells that bridges the midline of the thalamus between the anterodorsal nucleus of the thalamus of the left and right sides. According to Crosby (1962), it is more developed and consistently present in rodents than in primates (adapted from Brain Info). MBA:1113 NLX:144468 @@ -734840,7 +734226,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035972 interanterodorsal nucleus of the thalamus - + @@ -734853,7 +734239,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA @@ -735025,7 +734411,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + MBA:27 NLX:144470 neuronames:1956 @@ -735036,7 +734422,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0035975 intergeniculate leaflet of the lateral geniculate complex - + @@ -735049,7 +734435,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + NIFSTD @@ -735430,7 +734816,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A group of cells that fluoresce for dopamine and are distributed in clusters that, in the primate, are ventral and medial to the mammillothalamic tract of the hypothalamus; a few extend into the reuniens nucleus of the thalamus (Felten-1983). In the mouse A13 is located ventral to the mammillothalamic tract of the thalamus in the zona incerta (adapted from Brain Info). MBA:796 NLX:91101 @@ -735443,14 +734829,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036007 A13 dopaminergic cell group - + - + MBA @@ -735618,7 +735004,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA:9483 MBA:580 NLX:144476 @@ -735631,7 +735017,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036012 nucleus of the brachium of the inferior colliculus - + @@ -735644,7 +735030,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -735685,7 +735071,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -735717,7 +735103,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( intergluteal cleft - + @@ -735729,7 +735115,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + 2 @@ -736034,7 +735420,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12389 HBA:4730 PV-X @@ -736042,7 +735428,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036043 paravermic lobule X - + @@ -736055,7 +735441,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + HBA @@ -736078,7 +735464,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12846 HBA:4706 VIIAf @@ -736087,14 +735473,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036044 cerebellum vermis lobule VIIAf - + - + HBA @@ -736141,7 +735527,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA:12847 HBA:4707 VIIAt @@ -736150,14 +735536,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036065 cerebellum vermis lobule VIIAt - + - + HBA @@ -736284,21 +735670,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + One of two longitudinal ridges that develop caudal to the pharynx and fuses to give rise to the tracheoesophageal septum. NCIT:C34315 esophagotracheal fold UBERON:0036069 tracheoesophageal fold - + - + Wikipedia:Laryngotracheal_groove @@ -736439,19 +735825,19 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2:0004070 UBERON:0036072 respiratory primordium epithelium - + - + EHDAA2 @@ -736478,20 +735864,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + EHDAA2:0004071 respiratory primordium associated mesenchyme UBERON:0036073 respiratory primordium mesenchyme - + - + EHDAA2 @@ -736507,9 +735893,9 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - - - + + + A vein that leaves the vestibule through an individual bone canal running parallel to the vestibular aqueduct up to the dura of the posterior side of the petrosa in the area of the endolymphatic sac. It then opens in the inferior petrosal sinus or the jugular bulb. The vein receives other branches from the bone, dura and sac. FMA:52367 @@ -736519,34 +735905,34 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( vein of vestibular aqueduct - + - + - + - + FMA - + FMA - + FMA @@ -736575,7 +735961,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The meningeal branch of the mandibular nerve (recurrent branch, nervus spinosus) is a branch of the mandibular nerve that supplies the dura mater. FMA:53047 SCTID:280249002 @@ -736587,14 +735973,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036143 meningeal branch of mandibular nerve - + - + FMA @@ -736774,20 +736160,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + UBERON:0036148 orovelar muscle https://github.com/obophenotype/uberon/issues/1264 - + - + to be checked @@ -737043,7 +736429,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A rostral part of the parahippocampal gyrus. Some authors regard it as part of the gyrus underlying the uncus ( Ture-1999 ), others as a synonym for limen insula. DHBA:12166 @@ -737055,7 +736441,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036164 ambient gyrus - + @@ -737068,7 +736454,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DHBA @@ -737678,7 +737064,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -737708,7 +737094,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The tympanic nerve (nerve of Jacobson) is a branch of the glossopharyngeal nerve found near the ear. FMA:53480 @@ -737723,14 +737109,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( tympanic nerve - + - + FMA @@ -737813,7 +737199,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The most anterior region of the forebrain including both the telencephalon and the hypothalamus in the prosomeric model. DMBA:15567 SP @@ -737821,7 +737207,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( may contain the optic recess region (ORR) in the new model proposed by Yamamoto et al. 2017 (see https://www.ncbi.nlm.nih.gov/pubmed/28470718) secondary prosencephalon - + @@ -737834,7 +737220,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + DMBA DOI:10.1111/dgd.12348 @@ -737898,21 +737284,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The corticobulbar and corticospinal tracts combined. pyramidal tract Wikipedia:Pyramidal_tracts UBERON:0036224 corticobulbar and corticospinal tracts - + - + NIFSTD @@ -738679,7 +738065,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The upper part of the larynx, including the epiglottis; the area above the vocal cords. FMA:55476 NCIT:C12279 @@ -738689,14 +738075,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036263 supraglottic part of larynx - + - + FMA @@ -739063,21 +738449,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The anterior and posterior borders of the tonsillar fossa. They are composed of muscle tissue. NCIT:C12236 UBERON:0036274 Consider merge with palatopharyngeus tonsillar pillar - + - + NCIT @@ -739096,34 +738482,26 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + Wall of ventricle which is continuous with the wall of aorta. FMA:9556 left ventricular wall UBERON:0036285 wall of left ventricle - - - - - - - - - FMA - - - - - - FMA - @@ -739146,34 +738524,26 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + Wall of ventricle which is continuous with the wall of pulmonary trunk. FMA:9533 right ventricular wall UBERON:0036286 wall of right ventricle - - - - - - - - - FMA - - - - - - FMA - @@ -739204,7 +738574,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -739215,14 +738585,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036288 anterior wall of left ventricle - + - + FMA @@ -739450,7 +738820,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The upper tract of the renal system. The renal pelvis is the large cavity in the middle of each kidney. Urine drains from each kidney through a long tube called the ureter, into the bladder, where it is stored until it is passed from the body through the urethra. NCIT:C54419 @@ -739460,14 +738830,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( renal pelvis/ureter - + - + NCIT @@ -739627,34 +738997,32 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:14179 coronary arterial wall UBERON:0036328 wall of coronary artery - - - - FMA - - - - - FMA - @@ -739671,37 +739039,35 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - - + + + + + + + FMA:14621 appendix wall wall of vermiform appendix UBERON:0036337 wall of appendix - - - - - + - - FMA - - - - - + FMA @@ -739726,27 +739092,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:14657 gallbladder wall UBERON:0036343 wall of gallbladder - - - - - - - - - FMA - @@ -739763,33 +739127,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:15089 brachiocephalic arterial wall UBERON:0036351 wall of brachiocephalic artery - - - - FMA - - - - - FMA - @@ -739806,33 +739168,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:15090 subclavian arterial wall UBERON:0036352 wall of subclavian artery - - - - FMA - - - - - FMA - @@ -739849,7 +739209,10 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + @@ -739858,22 +739221,17 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + + + FMA:15704 anal canal wall UBERON:0036362 wall of anal canal - - - - - - - - - FMA - @@ -739890,33 +739248,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:15889 right ureteral wall UBERON:0036375 wall of right ureter - - - - FMA - - - - - FMA - @@ -739933,12 +739289,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:15890 left ureteral wall @@ -739946,22 +739310,12 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( wall of left ureter - - - - FMA - - - - - FMA - @@ -739978,33 +739332,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:18211 pulmonary arterial wall UBERON:0036422 wall of pulmonary artery - - - - FMA - - - - - FMA - @@ -740021,13 +739373,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:18303 uterine tube wall wall of oviduct @@ -740035,22 +739395,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0036441 wall of fallopian tube - - - - - - - - - FMA - - - - - - FMA - @@ -740073,33 +739417,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:19779 urethral wall UBERON:0036521 wall of urethra - - - - - - - - - FMA - - - - - - FMA - @@ -740116,34 +739452,26 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:19971 vaginal wall UBERON:0036523 wall of vagina - - - - - - - - - FMA - - - - - - FMA - @@ -740160,33 +739488,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:231590 UBERON:0036553 wall of synovial tendon sheath - - - - FMA - - - - - FMA - @@ -740197,26 +739523,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:242772 UBERON:0036654 wall of lateral ventricle - - - - - - - - - FMA - @@ -740227,26 +739551,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:242774 UBERON:0036655 wall of cerebral aqueduct - - - - - - - - - FMA - @@ -740257,26 +739579,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:242776 UBERON:0036656 wall of third ventricle - - - - - - - - - FMA - @@ -740287,26 +739607,24 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:242778 UBERON:0036657 wall of fourth ventricle - - - - - - - - - FMA - @@ -740317,34 +739635,32 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:242780 wall of central canal UBERON:0036658 wall of central canal of spinal cord - - - - FMA - - - - - FMA - @@ -740361,33 +739677,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:242841 UBERON:0036661 wall of ventricular system of brain - - - - FMA - - - - - FMA - @@ -740398,33 +739712,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:58098 eyeball wall UBERON:0036925 wall of eyeball - - - - - - - - - FMA - - - - - - FMA - @@ -740441,33 +739747,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:60069 pharyngotympanic tube wall UBERON:0036990 wall of pharyngotympanic tube - - - - - - - - - FMA - - - - - - FMA - @@ -740484,34 +739782,32 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:63144 orbit wall UBERON:0037089 wall of orbit - - - - FMA - - - - - FMA - @@ -740528,33 +739824,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:66284 common carotid arterial wall UBERON:0037094 wall of common carotid artery - - - - FMA - - - - - FMA - @@ -740571,54 +739865,46 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - - - + + + + + + + + Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees. FMA:7274 cardiac wall UBERON:0037144 wall of heart - - - - - + - + - - FMA - - - - - - FMA - - - - - + FMA - + FMA @@ -740643,33 +739929,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:79837 membranous labyrinth wall UBERON:0037191 wall of membranous labyrinth - - - - - - - - - FMA - - - - - - FMA - @@ -740686,33 +739964,25 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:85375 lacrimal ductal wall UBERON:0037237 wall of lacrimal duct - - - - - - - - - FMA - - - - - - FMA - @@ -740729,33 +739999,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:19676 male urethral wall UBERON:0037447 wall of male urethra - - - - FMA - - - - - FMA - @@ -740772,33 +740040,31 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + + + + - + + + + + + FMA:19780 female urethral wall UBERON:0037455 wall of female urethra - - - - FMA - - - - - FMA - @@ -741028,13 +740294,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The part of the human abdomen below the ribs and above the hips, often narrower than the areas above and below. FMA:228775 UBERON:0037468 waist - + @@ -741047,7 +740313,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + https://orcid.org/0000-0002-2825-0621 @@ -741948,7 +741214,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Gastric lymph node located along the lesser curvature of stomach. FMA:12797 aJCC level 17L node @@ -741956,14 +741222,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0037580 left gastric lymph node - + - + FMA @@ -743320,13 +742586,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Hepatic lymph node located along the common hepatic artery. FMA:277259 UBERON:0038691 common hepatic lymph node - + @@ -743339,7 +742605,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -743428,7 +742694,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + Superior pancreatic lymph node located along the proximal segment of splenic artery. FMA:277295 jPS 11p node @@ -743438,7 +742704,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0038695 proximal superior pancreatic lymph node - + @@ -743451,7 +742717,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -745003,13 +744269,13 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:61235 thyroid node UBERON:0038931 thyroid lymph node - + @@ -745022,7 +744288,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA @@ -745486,21 +744752,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The anterior intercostal branches of internal thoracic artery supply the upper five or six intercostal spaces. FMA:10641 intercostal branch of internal thoracic artery UBERON:0039169 anterior intercostal artery - + - + FMA @@ -745522,20 +744788,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:10648 medial mammary branch of perforating branch of internal thoracic artery UBERON:0039170 mammary branch of internal thoracic artery - + - + FMA @@ -745572,12 +744838,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0039175 subarachnoid space of brain - - - - - FMA - @@ -745606,12 +744866,6 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0039176 subarachnoid space of spinal cord - - - - - FMA - @@ -745625,20 +744879,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + A lower continuation of the vertebral vein and vertebral venous plexus that passes through the foramen of the transverse process of the 7th cervical vertebra and empties into the brachiocephalic vein. FMA:14290 UBERON:0039185 accessory vertebral vein - + - + FMA @@ -745684,20 +744938,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The suprascapular vein is a vein running above the scapula. It empties into the external jugular vein. FMA:14319 UBERON:0039187 suprascapular vein - + - + FMA @@ -745713,20 +744967,20 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + The superior laryngeal vein is a vein which drains the larynx into the superior thyroid vein. FMA:14324 UBERON:0039188 superior laryngeal vein - + - + FMA @@ -745748,21 +745002,21 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + An artery that commonly arises from the terminal branch of the ileocolic artery, or less commonly from the posterior cecal artery or an ileal artery.[1][2] It descends behind the termination of the ileum and enters the mesoappendix of the vermiform appendix. It runs near the free margin of the mesoappendix and ends in branches which supply the appendix. FMA:14818 appendiceal artery UBERON:0039215 appendicular artery - + - + FMA @@ -745796,7 +745050,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -745811,14 +745065,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb - + - + FMA Wikipedia @@ -745853,7 +745107,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + @@ -745864,14 +745118,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0039228 sigmoid vein - + - + FMA @@ -745946,7 +745200,7 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + vein ascending the posterior aspect of the body of the pubis to drain into the inferior epigastric vein; this vein frequently (about 20% of patients) serves as an accessory or replaced obturator vein. FMA:21200 accessory obturator vein @@ -745955,14 +745209,14 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( UBERON:0039256 pubic vein - + - + FMA @@ -746032,2131 +745286,10048 @@ According to Price (1990; pp. 979-998 in The Human Nervous System, G. Paxinos, ( - + FMA:70346 UBERON:0039260 thyrocervical artery - - - - + + + + + + + + + FMA + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + FMA:70471 + UBERON:0039261 + pancreatic artery + + + + + + + + + FMA:8755 + segmental pulmonary arterial tree + UBERON:0039262 + segmental pulmonary artery + + + + + + FMA + + + + + segmental pulmonary arterial tree + FMA:8755 + + + + + + + + + FMA:0329307 + UBERON:0039267 + obsoleted as believed to be equivalent to deep dorsal bein + obsolete deep vein of penis + true + + + + + + + + + + + + + + + + + + + + + The fissure between the labia majora + urogenital cleft + FMA:19995 + pudendal cleft + rima pudendi + vulvar slit + UBERON:0039288 + rima vulvae + + + + + The fissure between the labia majora + https://www.thefreedictionary.com/pudendal+cleft + + + + + urogenital cleft + https://www.thefreedictionary.com/pudendal+cleft + + + + + pudendal cleft + FMA:19995 + doi:10.1002/ca.23705 + + + + + + rima pudendi + A09.2.01.006 + doi:10.1002/ca.23705 + + + + + + vulvar slit + https://www.thefreedictionary.com/pudendal+cleft + + + + + + + + FMA:20461 + UBERON:0039300 + obsolete male pudendum + true + + + + + true + doi:10.1002/ca.23705 + + + + + + + + FMA:20463 + UBERON:0039302 + obsolete pudendum + true + + + + + true + doi:10.1002/ca.23705 + + + + + + + + + + FMA:20886 + posterior labial branch of internal pudendal artery + UBERON:0039351 + posterior labial artery + + + + + + + + + + FMA + + + + + posterior labial branch of internal pudendal artery + FMA:20886 + + + + + + + + + + + + + + + + + + + + + + + + + + FMA:20903 + arteria urethralis + UBERON:0039355 + urethral artery + + + + + arteria urethralis + A12.2.15.042 + + + + + + + + + + + + + + + + + + + + + + + + + + + + FMA:21267 + bulb of penis vein + vena bulbi penis + UBERON:0039376 + penile bulb vein + + + + + + + + + + FMA + + + + + bulb of penis vein + FMA:21267 + + + + + vena bulbi penis + FMA:21267 + + + + + + + + + + + + + + + + + + + + + + + + + + + A vein that drains the urethra. + FMA:21270 + UBERON:0039377 + urethral vein + + + + + + + + + + FMA + + + + + A vein that drains the urethra. + UBERON:cjm + + + + + + + + + + + + + + + + + + + + + + + + + + + FMA:21273 + vena bulbi vestibuli + UBERON:0039379 + vestibular bulb vein + + + + + + + + + + FMA + + + + + vena bulbi vestibuli + FMA:21273 + + + + + + + + + An anatomical conduit in the pelvis through which the internal pudendal artery, internal pudendal veins, and the pudendal nerve pass. + FMA:22071 + canalis pudendalis + pudendal canal + UBERON:0039418 + Alcock's canal + + + + + An anatomical conduit in the pelvis through which the internal pudendal artery, internal pudendal veins, and the pudendal nerve pass. + https://en.wikipedia.org/wiki/Pudendal_canal + + + + + canalis pudendalis + A09.5.04.003 + doi:10.1002/ca.23705 + + + + + + pudendal canal + FMA:22071 + doi:10.1002/ca.23705 + + + + + + + + + + + + + + + + + + + + + + + A vein that drains the prepuce and skin of the penis, and, running backward in the subcutaneous tissue, inclines to the right or left, and opens into the corresponding superficial external pudendal vein, a tributary of the great saphenous vein.. + FMA:21384 + UBERON:0039421 + superficial dorsal vein of penis + + + + + + + + + + FMA + + + + + A vein that drains the prepuce and skin of the penis, and, running backward in the subcutaneous tissue, inclines to the right or left, and opens into the corresponding superficial external pudendal vein, a tributary of the great saphenous vein.. + https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis + + + + + + + + + + + + + + + + + + + + + + + + One of the superficial dorsal vein of the penis or the deep dorsal vein of the penis. + UBERON:0039422 + dorsal vein of penis + + + + + One of the superficial dorsal vein of the penis or the deep dorsal vein of the penis. + https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis + + + + + + + + + UBERON:0039835 + posterior intercostal artery + + + + + + + + + + FMA:10649 + UBERON:0039838 + seventh anterior intercostal artery + + + + + + + + + + FMA + + + + + + FMA + + + + + + + + + + FMA:10650 + UBERON:0039839 + eighth anterior intercostal artery + + + + + + + + + + FMA + + + + + + FMA + + + + + + + + + + FMA:10651 + UBERON:0039840 + ninth anterior intercostal artery + + + + + + + + + + FMA + + + + + + FMA + + + + + + + + + FMA:10652 + first intercostal branch of internal thoracic artery + UBERON:0039841 + first anterior intercostal artery + + + + + + FMA + + + + + first intercostal branch of internal thoracic artery + FMA:10652 + + + + + + + + + FMA:10653 + second intercostal branch of internal thoracic artery + UBERON:0039842 + second anterior intercostal artery + + + + + + FMA + + + + + second intercostal branch of internal thoracic artery + FMA:10653 + + + + + + + + + FMA:10654 + third intercostal branch of internal thoracic artery + UBERON:0039843 + third anterior intercostal artery + + + + + + FMA + + + + + third intercostal branch of internal thoracic artery + FMA:10654 + + + + + + + + + FMA:10655 + fourth intercostal branch of internal thoracic artery + UBERON:0039844 + fourth anterior intercostal artery + + + + + + FMA + + + + + fourth intercostal branch of internal thoracic artery + FMA:10655 + + + + + + + + + FMA:10656 + fifth intercostal branch of internal thoracic artery + UBERON:0039845 + fifth anterior intercostal artery + + + + + + FMA + + + + + fifth intercostal branch of internal thoracic artery + FMA:10656 + + + + + + + + + FMA:10657 + sixth intercostal branch of internal thoracic artery + UBERON:0039846 + sixth anterior intercostal artery + + + + + + FMA + + + + + sixth intercostal branch of internal thoracic artery + FMA:10657 + + + + + + + + + + FMA:10663 + transverse scapular artery + UBERON:0039847 + suprascapular artery + + + + + + + + + + FMA + + + + + transverse scapular artery + FMA:10663 + + + + + + + + + FMA:10787 + UBERON:0039848 + anterior external vertebral venous plexus + + + + + + FMA + + + + + + + + + FMA:12852 + UBERON:0039849 + posterior external vertebral venous plexus + + + + + + FMA + + + + + + + + + + + + + + + FMA:13279 + anterior bronchopulmonary segment of left pulmonary artery + anterior segmental artery of left lung + anterior segmental artery of left upper lobe + UBERON:0039850 + left anterior segmental artery + + + + + anterior bronchopulmonary segment of left pulmonary artery + FMA:13279 + + + + + anterior segmental artery of left lung + FMA:13279 + + + + + anterior segmental artery of left upper lobe + FMA:13279 + + + + + + + + + FMA:13281 + apicoposterior artery of left lung + apicoposterior bronchopulmonary segment of left pulmonary artery + left apicoposterior pulmonary artery + UBERON:0039851 + apicoposterior segmental artery + + + + + + FMA + + + + + apicoposterior artery of left lung + FMA:13281 + + + + + apicoposterior bronchopulmonary segment of left pulmonary artery + FMA:13281 + + + + + left apicoposterior pulmonary artery + FMA:13281 + + + + + + + + + + + + + + + + + + + + + + + + + + + Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. + FMA:14342 + UBERON:0039856 + right ovarian vein + + + + + + + + + + FMA + + + + + Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. + FMA:14342 + + + + + + + + + + + + + + + + + + + + + + + + + + Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. + FMA:14347 + UBERON:0039857 + left ovarian vein + + + + + Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. + FMA:14347 + + + + + + + + + + + + + + + + + + + + + + A parallel fiber results from the axon of a cerebellar granule cell ascending through the molecular layer where it synapses on the dendritic branches of Purkinje cells and stellate cells. + 2023-07-10T11:45:59Z + UBERON:0700019 + This a grouping class for parallel fibers in any species. If annotating a parallel fiber in any species other than teleost fish, consider using 'parallel fiber, bifurcated'. + parallel fiber + + + + + A parallel fiber results from the axon of a cerebellar granule cell ascending through the molecular layer where it synapses on the dendritic branches of Purkinje cells and stellate cells. + GO:1990032 + doi:10.1007/978-94-007-1333-8_63 + + + + + + + + + + A parallel fiber that results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium. + + 2023-07-10T11:53:19Z + UBERON:0700020 + parallel fiber, bifurcated + + + + + A parallel fiber that results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium. + GO:1990032 + + + + + + + + + + + + + + + Subdivision of the head consisting of the area along the lower edge of the chin. + + + UBERON:1000000 + + chin ventral margin + + + + + Subdivision of the head consisting of the area along the lower edge of the chin. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + A collection of hairs that grows on the vertex (top of head). + + + collection of hair on cranium + cranial hair + head hair + UBERON:1000001 + + collection of hairs on vertex + + + + + A collection of hairs that grows on the vertex (top of head). + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + The middle part of the head, located approximately equidistant from the left and the right sides of the head. + + + cranial midline + UBERON:1000002 + + cranial midline area + + + + + The middle part of the head, located approximately equidistant from the left and the right sides of the head. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + A longitudinal flap of skin that hangs beneath the lower jaw or neck. + SCTID:13622004 + Wikipedia:Dewlap + UBERON:1000003 + + Compare with: comb and wattle + dewlap + + + + + A longitudinal flap of skin that hangs beneath the lower jaw or neck. + Wikipedia:Dewlap + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + A collection of hairs that grows on the external ear. + + + external ear hair + UBERON:1000004 + + collection of hair on external ear + + + + + A collection of hairs that grows on the external ear. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + Area along the edge of the external ear. + + + UBERON:1000005 + + external ear margin + https://github.com/obophenotype/uberon/issues/1795 + + + + + Area along the edge of the external ear. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + https://orcid.org/0000-0002-2825-0621 + + + + + + + + + + + + + + + + + + + + + + + + + + A collection of hairs that grows on the forehead. + + + UBERON:1000006 + + collection of hair on forehead + + + + + A collection of hairs that grows on the forehead. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + A bulge, knob, or swelling that protrudes from the forehead. + + + UBERON:1000007 + + forehead protuberance + + + + + A bulge, knob, or swelling that protrudes from the forehead. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + + Subdivision of the head consisting of the left half of the face, vertically divided. + + + UBERON:1000008 + + left part of face + + + + + Subdivision of the head consisting of the left half of the face, vertically divided. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head. + + + UBERON:1000009 + + midline crest + + + + + A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + + A benign tumor on the skin, usually with darker pigment. + An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO] + EFO:0000625 + MESH:D009506 + MPATH:361 + TAO:0005043 + Wikipedia:Melanocytic_nevus + ZFA:0005043 + naevus + nevus + melanocytic nevus + UBERON:1000010 + + + mole + + + + + + + + + + ZFA + + + + + A benign tumor on the skin, usually with darker pigment. + Wikipedia:Melanocytic_nevus + + + + + An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO] + 2012-08-14 + TAO:0005043 + TAO + ZFIN:curator + + + + + MESH:D009506 + + + + + + + naevus + ZFA:0005043 + + + + + nevus + ZFA:0005043 + + + + + + + + + + + + + + + Anatomical structure consisting of either corner of the mouth. + FMA:277716 + Wikipedia:Labial_commissure_of_mouth + commissura labiorum oris + commissural lip + corner of mouth + UBERON:1000011 + + labial commissure + http://upload.wikimedia.org/wikipedia/commons/9/90/Commissurebeforeandafter.jpg + + + + + Anatomical structure consisting of either corner of the mouth. + Wikipedia:Labial_commissure_of_mouth + + + + + commissura labiorum oris + Wikipedia:Labial_commissure_of_mouth + + + + + + + + + + + + + + + + Subdivision of the head consisting of the area along the front edge of the external nose. + + + UBERON:1000012 + + nose anterior margin + + + + + Subdivision of the head consisting of the area along the front edge of the external nose. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + The extreme point of curvature of the external nose. + + + UBERON:1000013 + + nose vertex + + + + + The extreme point of curvature of the external nose. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + + Subdivision of the head consisting of the right half of the face, vertically divided. + + + UBERON:1000014 + + right part of face + + + + + Subdivision of the head consisting of the right half of the face, vertically divided. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + + + + + + + + + + + + A zone of skin that is part of the snout. + + + EMAPA:37746 + MA:0003079 + snout skin + UBERON:1000015 + + skin of snout + + + + + A zone of skin that is part of the snout. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + EMAPA:37746 + MA:th + + + + + snout skin + MA:0003079 + + + + + + + + + + + + + + + Subdivision of the head consisting of the pointed or rounded end or extremity of the snout. + + + UBERON:1000016 + + tip of snout + + + + + Subdivision of the head consisting of the pointed or rounded end or extremity of the snout. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear. + + + UBERON:1000017 + + tip of external ear + + + + + Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + A small collection or tuft of hairs. + + + tuft of hair + UBERON:1000018 + + cluster of hairs + + + + + A small collection or tuft of hairs. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + The top of the head. + in the FMA, vertex is a point and not a subdivision + + + FMA:46484 + SCTID:362616002 + vertex of head + vertex + UBERON:1000019 + + top of head + + + + + The top of the head. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + in the FMA, vertex is a point and not a subdivision + FMA + + + + + vertex of head + FMA:46484 + + + + + vertex + FMA:46484 + + + + + + + + + + + + + + + + + + + + + + + + + + A collection of hairs that grows on the snout. + + + 2012-02-05T05:21:29Z + UBERON:1000020 + + collection of hair on snout + + + + + A collection of hairs that grows on the snout. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + + + + + + + + + + + + + + + + + + + + + + A zone of skin that is part of the face. + + + 2012-02-05T05:23:01Z + EMAPA:36657 + FMA:24758 + NCIT:C33561 + SCTID:361703006 + UMLS:C0222084 + face skin + facial skin + UBERON:1000021 + + + skin of face + + + + + A zone of skin that is part of the face. + UBERON:EJS + https://github.com/obophenotype/uberon/issues/34 + + + + + UMLS:C0222084 + ncithesaurus:Skin_of_the_Face + + + + + face skin + EMAPA:36657 + FMA:24758 + + + + + + + + + + + + + + + + A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal. + Zymbal's glands are located beneath squamous epithelium at the anterior and posterior aspect of the ear canal, and as a single external gland that is located anterior and ventral to the base of the external ear canal. The bilateral Zymbal's glands are adjacent to the auditory canal and are made up of several lobules of modified sebaceous glands - http://ratguide.com/health/neoplasia/zymbals_gland_tumor.php. + located anterior and ventral to the exterior ear canal in rodents[MP:0013384] + EMAPA:37808 + MA:0002900 + NCIT:C77954 + SCTID:105587007 + UMLS:C0687056 + Zymbal gland + auditory sebaceous gland + gland of Zymbal + UBERON:1000022 + Zymbal's gland + + + + + + + + + + ISBN:0123813611 + MA + + + + + + cjm + + + + + A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal. + ISBN:0123813611 + MP:0013384 + http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/zymbalgland.html + + + + + EMAPA:37808 + MA:th + + + + + UMLS:C0687056 + ncithesaurus:Zymbal_Gland + + + + + Zymbal gland + MA:0002900 + + + + + auditory sebaceous gland + ISBN:0123813611 + + + + + + + + + + The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages. + + EMAPA:35805 + FMA:15845 + MA:0002487 + NCIT:C33603 + SCTID:13515001 + UMLS:C0229691 + Malpighian corpuscles + pulp of spleen + splenic pulp + UBERON:1000023 + + spleen pulp + + + + + + + + + + FMA + + + + + The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages. + ncithesaurus:Splenic_Pulp + + + + + UMLS:C0229691 + ncithesaurus:Splenic_Pulp + + + + + Malpighian corpuscles + FMA:15845 + + + + + + + + + + + + + + + + + + + + + + + + + + A parenchyma that is part of a spleen. + FMA:16029 + splenic parenchyma + UBERON:1000024 + parenchyma of spleen + + + + + A parenchyma that is part of a spleen. + OBOL:automatic + + + + + splenic parenchyma + FMA:16029 + + + + + + + + + + + + + + + + + + + + + + + + + + An anatomical junction between two parts of the digestive tract. + + 2021-02-05T11:19:31Z + UBERON:1100000 + digestive tract junction + + + + + An anatomical junction between two parts of the digestive tract. + https://orcid.org/0000-0002-7073-9172 + + + + + + + + + A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa. + https://github.com/obophenotype/uberon/issues/3326 + + 2025-01-15T10:00:00Z + dragon-ai-agent + FMA:16532 + ileocaecal fold + UBERON:1200000 + ileocecal fold + + + + + A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa. + https://en.wikipedia.org/wiki/Ileocecal_fold + + + + + + + + + The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra. + https://github.com/obophenotype/uberon/issues/3618 + + 2025-11-03T00:00:00Z + dragon-ai-agent + L6 dorsal root ganglion + sixth lumbar spinal ganglion + UBERON:1200001 + + sixth lumbar dorsal root ganglion + + + + + The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra. + PMID:18316160 + + + + + + + + + + + + + + + + + + + + + + + + + + + A region of the carotid artery wall composed of the tunica intima and tunica media. + https://github.com/obophenotype/uberon/issues/3629 + + 2025-11-14T00:00:00Z + dragon-ai-agent + carotid intima-media + UBERON:1200002 + carotid artery intima-media region + + + + + A region of the carotid artery wall composed of the tunica intima and tunica media. + PMID:39416432 + + + + + carotid intima-media + PMID:39416432 + + + + + + + + + + + + + + + + The superior, dome-shaped portion of the uterus. + https://github.com/obophenotype/uberon/issues/3637 + + 2025-12-03T00:00:00Z + dragon-ai-agent + fundus of uterus + fundus uteri + UBERON:1200003 + uterine fundus + + + + + The superior, dome-shaped portion of the uterus. + PMID:40653088 + PMID:41204538 + + + + + fundus uteri + PMID:39112955 + + + + + + + + + + + + + + + + A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly. + + + 2026-03-19T00:00:00Z + + acromial process of scapula + + + + + A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle. + + + 2026-03-19T00:00:00Z + + alae of sacrum + + + + + A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth. + + + 2026-03-19T00:00:00Z + + alveolar border of mandible + + + + + A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface. + + + 2026-03-19T00:00:00Z + + anterior arch of first cervical vertebra + + + + + An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery. + + + 2026-03-19T00:00:00Z + + anterior clinoid process of sphenoid bone + + + + + A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly. + + + 2026-03-19T00:00:00Z + + anterior gluteal line of ilium of os coxa + + + + + A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity. + + + 2026-03-19T00:00:00Z + + anterior sacral foramina of sacrum + + + + + A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle. + + + 2026-03-19T00:00:00Z + + anterior tubercle of first cervical vertebra + + + + + A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee. + + + 2026-03-19T00:00:00Z + + anterolateral tubercle of tibia + + + + + A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis. + + + 2026-03-19T00:00:00Z + + arcuate line of ilium of os coxa + + + + + A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex. + + + 2026-03-19T00:00:00Z + + articular surface for cuboid bone of calcaneus + + + + + A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates. + + + 2026-03-19T00:00:00Z + + articular tubercle of squamous part of temporal bone + + + + + A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint. + + + 2026-03-19T00:00:00Z + + auricular surface of ilium of os coxa + + + + + A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux. + + + 2026-03-19T00:00:00Z + + base of first distal phalanx of foot + + + + + A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb. + + + 2026-03-19T00:00:00Z + + base of first distal phalanx of hand + + + + + A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex. + + + 2026-03-19T00:00:00Z + + base of first proximal phalanx of foot + + + + + A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint. + + + 2026-03-19T00:00:00Z + + base of first proximal phalanx of hand + + + + + A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface. + + + 2026-03-19T00:00:00Z + + body of calcaneus + + + + + A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra. + + + 2026-03-19T00:00:00Z + + body of second cervical vertebra + + + + + A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface. + + + 2026-03-19T00:00:00Z + + body of sphenoid bone + + + + + A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament. + + + 2026-03-19T00:00:00Z + + calcaneal sulcus of calcaneus + + + + + A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint. + + + 2026-03-19T00:00:00Z + + coccygeal cornu of coccyx + + + + + A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint. + ISBN:9780323393225 + Wikipedia:Coccyx + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone. + + + 2026-03-19T00:00:00Z + + coronoid fossa of humerus + + + + + A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone. + ISBN:9780323393225 + Wikipedia:Humerus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially. + + + 2026-03-19T00:00:00Z + + costal groove of first rib + + + + + A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs. + + + 2026-03-19T00:00:00Z + + costal groove of twelfth rib + + + + + A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7. + + + 2026-03-19T00:00:00Z + + costal notches of sternum + + + + + A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7. + ISBN:9780323393225 + Wikipedia:Sternum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + + A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri. + + + 2026-03-19T00:00:00Z + + crista galla of ethmoid bone + + + + + A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri. + ISBN:9780323393225 + Wikipedia:Ethmoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle. + + + 2026-03-19T00:00:00Z + + digastric fossa of mandible + + + + + A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons. + + + 2026-03-19T00:00:00Z + + dorsum sellae of sphenoid bone + + + + + A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall. + + + 2026-03-19T00:00:00Z + + ethmoidal air cells of ethmoid bone + + + + + A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall. + ISBN:9780323393225 + Wikipedia:Ethmoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus. + + + 2026-03-19T00:00:00Z + + ethmoidal bulla of ethmoid bone + + + + + A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus. + ISBN:9780323393225 + Wikipedia:Ethmoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly. + + + 2026-03-19T00:00:00Z + + external auditory meatus of squamous part of temporal bone + + + + + A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs. + + + 2026-03-19T00:00:00Z + + facet of eleventh rib + + + + + A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above. + + + 2026-03-19T00:00:00Z + + facet of first rib + + + + + A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet. + + + 2026-03-19T00:00:00Z + + facet of tenth rib + + + + + A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet. + + + 2026-03-19T00:00:00Z + + facet of twelfth rib + + + + + A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint. + + + 2026-03-19T00:00:00Z + + fibular facet of tibia + + + + + A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament. + + + 2026-03-19T00:00:00Z + + fibular notch of tibia + + + + + A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below. + + + 2026-03-19T00:00:00Z + + fibular trochlea of calcaneus + + + + + A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve. + + + 2026-03-19T00:00:00Z + + foramen ovale of sphenoid bone + + + + + A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus. + + + 2026-03-19T00:00:00Z + + fossa for lacrimal sac of lacrimal bone + + + + + A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus. + ISBN:9780323393225 + Wikipedia:Lacrimal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + + A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri. + + + 2026-03-19T00:00:00Z + + frontal crest of frontal bone + + + + + A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri. + ISBN:9780323393225 + Wikipedia:Frontal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane. + + + 2026-03-19T00:00:00Z + + glabella of frontal bone + + + + + A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane. + ISBN:9780323393225 + Wikipedia:Frontal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae. + + + 2026-03-19T00:00:00Z + + gluteal surface of ilium of os coxa + + + + + A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle. + + + 2026-03-19T00:00:00Z + + gluteal tuberosity of femur + + + + + A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle. + ISBN:9780323393225 + Wikipedia:Femur + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses. + + + 2026-03-19T00:00:00Z + + granula foveaolae of parietal bone + + + + + A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses. + ISBN:9780323393225 + Wikipedia:Parietal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate. + + + 2026-03-19T00:00:00Z + + greater palatine canal of maxilla + + + + + A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate. + ISBN:9780323393225 + Wikipedia:Maxilla + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum. + + + 2026-03-19T00:00:00Z + + greater wings of sphenoid bone + + + + + A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal. + + + 2026-03-19T00:00:00Z + + groove for fibularis longus tendon of cuboid + + + + + A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal. + ISBN:9780323393225 + Wikipedia:Cuboid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater. + + + 2026-03-19T00:00:00Z + + groove for middle meningeal a. of parietal bone + + + + + A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater. + ISBN:9780323393225 + Wikipedia:Parietal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal. + + + 2026-03-19T00:00:00Z + + groove for nasopalatine nerve of vomer + + + + + A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal. + ISBN:9780323393225 + Wikipedia:Vomer + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle. + + + 2026-03-19T00:00:00Z + + groove for posterior deep temporal artery of squamous part of temporal bone + + + + + A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs. + + + 2026-03-19T00:00:00Z + + groove for subclavian artery of first rib + + + + + A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb. + + + 2026-03-19T00:00:00Z + + groove for subclavian vein of first rib + + + + + A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum. + + + 2026-03-19T00:00:00Z + + groove for superior sagittal sinus of frontal bone + + + + + A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum. + ISBN:9780323393225 + Wikipedia:Frontal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance. + + + 2026-03-19T00:00:00Z + + groove for superior sagittal sinus of parietal bone + + + + + A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance. + ISBN:9780323393225 + Wikipedia:Parietal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum. + + + 2026-03-19T00:00:00Z + + groove for tendon of flexor hallucis longus muscle of calcaneus + + + + + A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus. + + + 2026-03-19T00:00:00Z + + groove for transverse sinus of squamous part of occipital bone + + + + + A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus. + ISBN:9780323393225 + Wikipedia:Occipital_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum. + + + 2026-03-19T00:00:00Z + + groove for vertebral artery of first cervical vertebra + + + + + A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination. + + + 2026-03-19T00:00:00Z + + head of radius of radius + + + + + A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination. + ISBN:9780323393225 + Wikipedia:Radius_(bone) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity. + + + 2026-03-19T00:00:00Z + + head of second distal phalanx of foot + + + + + A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit. + + + 2026-03-19T00:00:00Z + + head of second distal phalanx of hand + + + + + A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint. + + + 2026-03-19T00:00:00Z + + head of second middle phalanx of foot + + + + + A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit. + + + 2026-03-19T00:00:00Z + + head of second middle phalanx of hand + + + + + A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint. + + + 2026-03-19T00:00:00Z + + head of third middle phalanx of hand + + + + + A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint. + + + 2026-03-19T00:00:00Z + + head of ulna of ulna + + + + + A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint. + ISBN:9780323393225 + Wikipedia:Ulna + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal. + + + 2026-03-19T00:00:00Z + + hiatus and groove of petrous part of temporal bone for greater petrosal nerve + + + + + A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion. + + + 2026-03-19T00:00:00Z + + hiatus and groove of petrous part of temporal bone for lesser petrosal nerve + + + + + A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage. + + + 2026-03-19T00:00:00Z + + hyoid region bone + + + + + A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage. + ISBN:9780323393225 + Wikipedia:Hyoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning. + + + 2026-03-19T00:00:00Z + + iliac tubercle of ilium of os coxa + + + + + A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae. + + + 2026-03-19T00:00:00Z + + iliac tuberosity of ilium of os coxa + + + + + A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface. + + + 2026-03-19T00:00:00Z + + iliopubic ramus of os coxa + + + + + A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility. + + + 2026-03-19T00:00:00Z + + inferior articular facet of eighth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility. + + + 2026-03-19T00:00:00Z + + inferior articular facet of eleventh thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6. + + + 2026-03-19T00:00:00Z + + inferior articular facet of fifth cervical vertebra + + + + + A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation. + + + 2026-03-19T00:00:00Z + + inferior articular facet of fifth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint. + + + 2026-03-19T00:00:00Z + + inferior articular facet of first cervical vertebra + + + + + A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2. + + + 2026-03-19T00:00:00Z + + inferior articular facet of first thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5. + + + 2026-03-19T00:00:00Z + + inferior articular facet of fourth cervical vertebra + + + + + A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae. + + + 2026-03-19T00:00:00Z + + inferior articular facet of fourth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern. + + + 2026-03-19T00:00:00Z + + inferior articular facet of ninth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra. + + + 2026-03-19T00:00:00Z + + inferior articular facet of second cervical vertebra + + + + + A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region. + + + 2026-03-19T00:00:00Z + + inferior articular facet of second thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition. + + + 2026-03-19T00:00:00Z + + inferior articular facet of seventh cervical vertebra + + + + + A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates. + + + 2026-03-19T00:00:00Z + + inferior articular facet of seventh thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7. + + + 2026-03-19T00:00:00Z + + inferior articular facet of sixth cervical vertebra + + + + + A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine. + + + 2026-03-19T00:00:00Z + + inferior articular facet of sixth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern. + + + 2026-03-19T00:00:00Z + + inferior articular facet of tenth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4. + + + 2026-03-19T00:00:00Z + + inferior articular facet of third cervical vertebra + + + + + A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine. + + + 2026-03-19T00:00:00Z + + inferior articular facet of third thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction. + + + 2026-03-19T00:00:00Z + + inferior articular facet of twelfth thoracic vertebra + + + + + A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae. + + + 2026-03-19T00:00:00Z + + inferior articular process of first cervical vertebra + + + + + A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra. + + + 2026-03-19T00:00:00Z + + inferior articular process of second cervical vertebra + + + + + A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11. + + + 2026-03-19T00:00:00Z + + inferior costal facet of eleventh thoracic vertebra + + + + + A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11. + + + 2026-03-19T00:00:00Z + + inferior costal facet of tenth thoracic vertebra + + + + + A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles. + + + 2026-03-19T00:00:00Z + + inferior mental spine of mandible + + + + + A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles. + + + 2026-03-19T00:00:00Z + + inferior nuchal line of squamous part of occipital bone + + + + + A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles. + ISBN:9780323393225 + Wikipedia:Occipital_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes. + + + 2026-03-19T00:00:00Z + + inferior vertebral notch of first cervical vertebra + + + + + A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle. + + + 2026-03-19T00:00:00Z + + infraglenoid tubercle of scapula + + + + + A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle. + + + 2026-03-19T00:00:00Z + + infraspinous fossa of scapula + + + + + A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface. + + + 2026-03-19T00:00:00Z + + intercondylar notch of femur + + + + + A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface. + ISBN:9780323393225 + Wikipedia:Femur + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + + A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae. + + + 2026-03-19T00:00:00Z + + intermediate sacral crest of sacrum + + + + + A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar. + + + 2026-03-19T00:00:00Z + + internal auditory meatus of petrous part of temporal bone + + + + + A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet. + + + 2026-03-19T00:00:00Z + + internal occipital protuberance of squamous part of occipital bone + + + + + A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet. + ISBN:9780323393225 + Wikipedia:Occipital_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg. + + + 2026-03-19T00:00:00Z + + interosseus border of tibia + + + + + A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments. + + + 2026-03-19T00:00:00Z + + ischial body of ischium of os coxa + + + + + A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland. + + + 2026-03-19T00:00:00Z + + lacrimal fossa of frontal bone + + + + + A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland. + ISBN:9780323393225 + Wikipedia:Frontal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process. + + + 2026-03-19T00:00:00Z + + lamina of first cervical vertebra + + + + + A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle. + + + 2026-03-19T00:00:00Z + + lamina of second cervical vertebra + + + + + A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis. + + + 2026-03-19T00:00:00Z + + lateral process of tuberosity of calcaneus + + + + + A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + + A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments. + + + 2026-03-19T00:00:00Z + + lateral sacral crest of sacrum + + + + + A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal. + + + 2026-03-19T00:00:00Z + + lesser wings of sphenoid bone + + + + + A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae. + + + 2026-03-19T00:00:00Z + + linea terminalis of sacrum + + + + + A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap. + + + 2026-03-19T00:00:00Z + + lunate surface of os coxa + + + + + A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala. + + + 2026-03-19T00:00:00Z + + mammillary process of fifth lumbar vertebra + + + + + A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction. + + + 2026-03-19T00:00:00Z + + mammillary process of first lumbar vertebra + + + + + A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine. + + + 2026-03-19T00:00:00Z + + mammillary process of fourth lumbar vertebra + + + + + A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5. + + + 2026-03-19T00:00:00Z + + mammillary process of second lumbar vertebra + + + + + A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures. + + + 2026-03-19T00:00:00Z + + mammillary process of third lumbar vertebra + + + + + A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface. + + + 2026-03-19T00:00:00Z + + mandibular angle of mandible + + + + + A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal. + + + 2026-03-19T00:00:00Z + + mandibular foramen of mandible + + + + + A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint. + + + 2026-03-19T00:00:00Z + + mandibular fossa of squamous part of temporal bone + + + + + A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle. + + + 2026-03-19T00:00:00Z + + mandibular notch of mandible + + + + + A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery. + + + 2026-03-19T00:00:00Z + + mastoid foramen of mastoid part of temporal bone + + + + + A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery. + + + 2026-03-19T00:00:00Z + + mastoid notch of mastoid part of temporal bone + + + + + A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively. + + + 2026-03-19T00:00:00Z + + medial malleolus of tibia + + + + + A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament. + + + 2026-03-19T00:00:00Z + + medial process of tuberosity of calcaneus + + + + + A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe. + + + 2026-03-19T00:00:00Z + + medial pterygoid plate of sphenoid bone + + + + + A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + + A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles. + + + 2026-03-19T00:00:00Z + + median sacral crest of sacrum + + + + + A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens. + + + 2026-03-19T00:00:00Z + + mental protuberance of mandible + + + + + A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel. + + + 2026-03-19T00:00:00Z + + mylohyoid groove of mandible + + + + + A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe. + + + 2026-03-19T00:00:00Z + + mylohyoid line of mandible + + + + + A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity. + + + 2026-03-19T00:00:00Z + + nasolacrimal canal of maxilla + + + + + A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity. + ISBN:9780323393225 + Wikipedia:Maxilla + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament. + + + 2026-03-19T00:00:00Z + + neck of radius of radius + + + + + A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament. + ISBN:9780323393225 + Wikipedia:Radius_(bone) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of eighth rib + + + + + A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of fifth rib + + + + + A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of first rib + + + + + A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of fourth rib + + + + + A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of ninth rib + + + + + A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of second rib + + + + + A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of seventh rib + + + + + A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of sixth rib + + + + + A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of tenth rib + + + + + A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra. + + + 2026-03-19T00:00:00Z + + non-articular facet of tubercle of third rib + + + + + A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh. + + + 2026-03-19T00:00:00Z + + obturator groove of pubis of os coxa + + + + + A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa. + + + 2026-03-19T00:00:00Z + + olfactory foramina of ethmoid bone + + + + + A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa. + ISBN:9780323393225 + Wikipedia:Ethmoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface. + + + 2026-03-19T00:00:00Z + + pecten pubis of pubis of os coxa + + + + + A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle. + + + 2026-03-19T00:00:00Z + + pectinal line of femur + + + + + A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle. + ISBN:9780323393225 + Wikipedia:Femur + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina. + + + 2026-03-19T00:00:00Z + + pedicle of first cervical vertebra + + + + + A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen. + + + 2026-03-19T00:00:00Z + + pedicle of second cervical vertebra + + + + + A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum. + + + 2026-03-19T00:00:00Z + + perpendicular plate of ethmoid bone + + + + + A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum. + ISBN:9780323393225 + Wikipedia:Ethmoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa. + + + 2026-03-19T00:00:00Z + + petrotympanic fissure of squamous part of temporal bone + + + + + A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface. + + + 2026-03-19T00:00:00Z + + posterior arch of first cervical vertebra + + + + + An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex. + + + 2026-03-19T00:00:00Z + + posterior clinoid process of sphenoid bone + + + + + A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius. + + + 2026-03-19T00:00:00Z + + posterior gluteal line of ilium of os coxa + + + + + A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back. + + + 2026-03-19T00:00:00Z + + posterior sacral foramina of sacrum + + + + + A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate. + + + 2026-03-19T00:00:00Z + + postglenoid tubercle of squamous part of temporal bone + + + + + A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle. + + + 2026-03-19T00:00:00Z + + pterygoid fossa of sphenoid bone + + + + + A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle. + + + 2026-03-19T00:00:00Z + + pterygoid fovea of mandible + + + + + A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate. + + + 2026-03-19T00:00:00Z + + pterygoid hamulus of sphenoid bone + + + + + A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate. + ISBN:9780323393225 + Wikipedia:Sphenoid_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle. + + + 2026-03-19T00:00:00Z + + pubic body of pubis of os coxa + + + + + A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + + A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles. + + + 2026-03-19T00:00:00Z + + pubic crest of pubis of os coxa + + + + + A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring. + + + 2026-03-19T00:00:00Z + + pubic tubercle of pubis of os coxa + + + + + A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring. + ISBN:9780323393225 + Wikipedia:Hip_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint. + + + 2026-03-19T00:00:00Z + + radial fossa of humerus + + + + + A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint. + ISBN:9780323393225 + Wikipedia:Humerus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove. + + + 2026-03-19T00:00:00Z + + radial groove of humerus + + + + + A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove. + ISBN:9780323393225 + Wikipedia:Humerus + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon. + + + 2026-03-19T00:00:00Z + + radial tuberosity of radius + + + + + A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon. + ISBN:9780323393225 + Wikipedia:Radius_(bone) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis. + + + 2026-03-19T00:00:00Z + + sacral apex of sacrum + + + + + A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus. + + + 2026-03-19T00:00:00Z + + sacral canal of sacrum + + + + + A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia. + + + 2026-03-19T00:00:00Z + + sacral cornu of sacrum + + + + + A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections. + + + 2026-03-19T00:00:00Z + + sacral hiatus of sacrum + + + + + A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis. + + + 2026-03-19T00:00:00Z + + sacral promontory of sacrum + + + + + A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles. + + + 2026-03-19T00:00:00Z + + sacral spine of sacrum + + + + + A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium. + + + 2026-03-19T00:00:00Z + + sacral tuberosity of sacrum + + + + + A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium. + ISBN:9780323393225 + Wikipedia:Sacrum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib. + + + 2026-03-19T00:00:00Z + + scalene tubercle of first rib + + + + + A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle. + + + 2026-03-19T00:00:00Z + + scaphoid tubercle of scaphoid + + + + + A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa. + + + 2026-03-19T00:00:00Z + + scapular notch of scapula + + + + + A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles. + + + 2026-03-19T00:00:00Z + + scapular spine of scapula + + + + + A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp. + + + 2026-03-19T00:00:00Z + + shaft of first distal phalanx of hand + + + + + A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb. + + + 2026-03-19T00:00:00Z + + shaft of first proximal phalanx of hand + + + + + A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane. + + + 2026-03-19T00:00:00Z + + shaft of radius of radius + + + + + A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane. + ISBN:9780323393225 + Wikipedia:Radius_(bone) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane. + + + 2026-03-19T00:00:00Z + + shaft of ulna of ulna + + + + + A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane. + ISBN:9780323393225 + Wikipedia:Ulna + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg. + + + 2026-03-19T00:00:00Z + + soleal line of tibia + + + + + A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle. + + + 2026-03-19T00:00:00Z + + spinous process of first cervical vertebra + + + + + A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles. + + + 2026-03-19T00:00:00Z + + spinous process of second cervical vertebra + + + + + A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum. + + + 2026-03-19T00:00:00Z + + sternal angle of sternum + + + + + A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum. + ISBN:9780323393225 + Wikipedia:Sternum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib. + + + 2026-03-19T00:00:00Z + + sternal end of eighth rib + + + + + A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature. + + + 2026-03-19T00:00:00Z + + sternal end of eleventh rib + + + + + A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib. + + + 2026-03-19T00:00:00Z + + sternal end of fifth rib + + + + + A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib. + + + 2026-03-19T00:00:00Z + + sternal end of first rib + + + + + A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle. + + + 2026-03-19T00:00:00Z + + sternal end of fourth rib + + + + + A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib. + + + 2026-03-19T00:00:00Z + + sternal end of ninth rib + + + + + A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum. + + + 2026-03-19T00:00:00Z + + sternal end of second rib + + + + + A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction. + + + 2026-03-19T00:00:00Z + + sternal end of seventh rib + + + + + A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum. + + + 2026-03-19T00:00:00Z + + sternal end of sixth rib + + + + + A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin. + + + 2026-03-19T00:00:00Z + + sternal end of tenth rib + + + + + A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches. + + + 2026-03-19T00:00:00Z + + sternal end of third rib + + + + + A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney. + + + 2026-03-19T00:00:00Z + + sternal end of twelfth rib + + + + + A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney. + ISBN:9780323393225 + Wikipedia:Rib + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles. + + + 2026-03-19T00:00:00Z + + sternal region bone + + + + + A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles. + ISBN:9780323393225 + Wikipedia:Sternum + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region. + + + 2026-03-19T00:00:00Z + + stylomastoid foramen of petrous part of temporal bone + + + + + A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged. + + + 2026-03-19T00:00:00Z + + sublingual fossa of mandible + + + + + A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated. + + + 2026-03-19T00:00:00Z + + submandibular fossa of mandible + + + + + A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males. + + + 2026-03-19T00:00:00Z + + supercilary arch of frontal bone + + + + + A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males. + ISBN:9780323393225 + Wikipedia:Frontal_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine. + + + 2026-03-19T00:00:00Z + + superior articular facet of eighth thoracic vertebra + + + + + A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern. + + + 2026-03-19T00:00:00Z + + superior articular facet of eleventh thoracic vertebra + + + + + A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint. + + + 2026-03-19T00:00:00Z + + superior articular facet of fifth cervical vertebra + + + + + A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease. + + + 2026-03-19T00:00:00Z + + superior articular facet of fifth lumbar vertebra + + + + + A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine. + + + 2026-03-19T00:00:00Z + + superior articular facet of fifth thoracic vertebra + + + + + A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint. + + + 2026-03-19T00:00:00Z + + superior articular facet of first cervical vertebra + + + + + A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column. + + + 2026-03-19T00:00:00Z + + superior articular facet of first lumbar vertebra + + + + + A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern. + + + 2026-03-19T00:00:00Z + + superior articular facet of first thoracic vertebra + + + + + A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint. + + + 2026-03-19T00:00:00Z + + superior articular facet of fourth cervical vertebra + + + + + A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine. + + + 2026-03-19T00:00:00Z + + superior articular facet of fourth lumbar vertebra + + + + + A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine. + + + 2026-03-19T00:00:00Z + + superior articular facet of fourth thoracic vertebra + + + + + A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + + + + + + + + A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained. + + + 2026-03-19T00:00:00Z + + superior articular facet of ninth thoracic vertebra + - - - - FMA + + + A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - - + + + A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint. + + + 2026-03-19T00:00:00Z + + superior articular facet of second cervical vertebra + + + + + A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + - FMA:70471 - UBERON:0039261 - pancreatic artery + A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine. + + + 2026-03-19T00:00:00Z + + superior articular facet of second lumbar vertebra + + + + A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ + - + - - - FMA:8755 - segmental pulmonary arterial tree - UBERON:0039262 - segmental pulmonary artery + + + + + + + + + A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine. + + + 2026-03-19T00:00:00Z + + superior articular facet of second thoracic vertebra - - - - FMA - - - - - segmental pulmonary arterial tree - FMA:8755 + + + A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - FMA:0329307 - UBERON:0039267 - obsoleted as believed to be equivalent to deep dorsal bein - obsolete deep vein of penis - true + + + + + + + + + A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets. + + + 2026-03-19T00:00:00Z + + superior articular facet of seventh cervical vertebra + + + + A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ + - + - - + + - + + A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation. + + + 2026-03-19T00:00:00Z + + superior articular facet of seventh thoracic vertebra + + + + + A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + - The fissure between the labia majora - urogenital cleft - FMA:19995 - pudendal cleft - rima pudendi - vulvar slit - UBERON:0039288 - rima vulvae + A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint. + + + 2026-03-19T00:00:00Z + + superior articular facet of sixth cervical vertebra - + - The fissure between the labia majora - https://www.thefreedictionary.com/pudendal+cleft - - - - - urogenital cleft - https://www.thefreedictionary.com/pudendal+cleft - - - - - pudendal cleft - FMA:19995 - doi:10.1002/ca.23705 - - - - - - rima pudendi - A09.2.01.006 - doi:10.1002/ca.23705 - - - - - - vulvar slit - https://www.thefreedictionary.com/pudendal+cleft + A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - FMA:20461 - UBERON:0039300 - obsolete male pudendum - true + + + + + + + + + A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex. + + + 2026-03-19T00:00:00Z + + superior articular facet of sixth thoracic vertebra - - - true - doi:10.1002/ca.23705 + + + A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - FMA:20463 - UBERON:0039302 - obsolete pudendum - true + + + + + + + + + A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift. + + + 2026-03-19T00:00:00Z + + superior articular facet of tenth thoracic vertebra - - - true - doi:10.1002/ca.23705 + + + A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - FMA:20886 - posterior labial branch of internal pudendal artery - UBERON:0039351 - posterior labial artery + + + + + + + + + A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint. + + + 2026-03-19T00:00:00Z + + superior articular facet of third cervical vertebra - - - - - - - - FMA - - - - - posterior labial branch of internal pudendal artery - FMA:20886 + + + A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - - + + - FMA:20903 - arteria urethralis - UBERON:0039355 - urethral artery + A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region. + + + 2026-03-19T00:00:00Z + + superior articular facet of third lumbar vertebra - - - arteria urethralis - A12.2.15.042 - + + + A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - - + + - - + + - FMA:21267 - bulb of penis vein - vena bulbi penis - UBERON:0039376 - penile bulb vein + A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column. + + + 2026-03-19T00:00:00Z + + superior articular facet of third thoracic vertebra - - - - - - - - - FMA - - - - - bulb of penis vein - FMA:21267 - - - - vena bulbi penis - FMA:21267 + + + A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - - + + - - + + - A vein that drains the urethra. - FMA:21270 - UBERON:0039377 - urethral vein + A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern. + + + 2026-03-19T00:00:00Z + + superior articular facet of twelfth thoracic vertebra - - - - - - - - - FMA - - + - A vein that drains the urethra. - UBERON:cjm + A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - - + + - - + + - FMA:21273 - vena bulbi vestibuli - UBERON:0039379 - vestibular bulb vein + A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head. + + + 2026-03-19T00:00:00Z + + superior articular process of first cervical vertebra - - - - - - - - - FMA - - - - vena bulbi vestibuli - FMA:21273 + + + A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ - + - - - An anatomical conduit in the pelvis through which the internal pudendal artery, internal pudendal veins, and the pudendal nerve pass. - FMA:22071 - canalis pudendalis - pudendal canal - UBERON:0039418 - Alcock's canal + + + + + + + + + A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints. + + + 2026-03-19T00:00:00Z + + superior articular process of second cervical vertebra - + - An anatomical conduit in the pelvis through which the internal pudendal artery, internal pudendal veins, and the pudendal nerve pass. - https://en.wikipedia.org/wiki/Pudendal_canal - - - - - canalis pudendalis - A09.5.04.003 - doi:10.1002/ca.23705 - - - - - - pudendal canal - FMA:22071 - doi:10.1002/ca.23705 - + A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ - + - - - + + - - + + + A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra. + + + 2026-03-19T00:00:00Z + + superior costal facet of eleventh thoracic vertebra + + + + + A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + - A vein that drains the prepuce and skin of the penis, and, running backward in the subcutaneous tissue, inclines to the right or left, and opens into the corresponding superficial external pudendal vein, a tributary of the great saphenous vein.. - FMA:21384 - UBERON:0039421 - superficial dorsal vein of penis + A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles. + + + 2026-03-19T00:00:00Z + + superior mental spine of mandible - - - - - - - - FMA - - - + - A vein that drains the prepuce and skin of the penis, and, running backward in the subcutaneous tissue, inclines to the right or left, and opens into the corresponding superficial external pudendal vein, a tributary of the great saphenous vein.. - https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis + A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles. + ISBN:9780323393225 + Wikipedia:Mandible + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - + + - + - One of the superficial dorsal vein of the penis or the deep dorsal vein of the penis. - UBERON:0039422 - dorsal vein of penis + A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles. + + + 2026-03-19T00:00:00Z + + superior nuchal line of squamous part of occipital bone - + - One of the superficial dorsal vein of the penis or the deep dorsal vein of the penis. - https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis + A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles. + ISBN:9780323393225 + Wikipedia:Occipital_bone + https://fipat.library.dal.ca/ta2/ - + - - - UBERON:0039835 - posterior intercostal artery + + + + + + + + + A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve. + + + 2026-03-19T00:00:00Z + + superior vertebral notch of first cervical vertebra + + + + A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve. + ISBN:9780323393225 + Wikipedia:Atlas_(anatomy) + https://fipat.library.dal.ca/ta2/ + - + - - - - FMA:10649 - UBERON:0039838 - seventh anterior intercostal artery + + + + + + + + + A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve. + + + 2026-03-19T00:00:00Z + + superior vertebral notch of second cervical vertebra - - - - - - - - - FMA - - - - - FMA + + + A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ - + - - - - FMA:10650 - UBERON:0039839 - eighth anterior intercostal artery + + + + + + + + + A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle. + + + 2026-03-19T00:00:00Z + + supinator fossa of ulna - - - - - - - - - FMA - - - - - FMA + + + A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle. + ISBN:9780323393225 + Wikipedia:Ulna + https://fipat.library.dal.ca/ta2/ - + - - - - FMA:10651 - UBERON:0039840 - ninth anterior intercostal artery + + + + + + + + + + A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle. + + + 2026-03-19T00:00:00Z + + supramastoid crest of squamous part of temporal bone - - - - - - - - FMA - - - - - - FMA + + + A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10652 - first intercostal branch of internal thoracic artery - UBERON:0039841 - first anterior intercostal artery + + + + + + + + + A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp. + + + 2026-03-19T00:00:00Z + + supraorbital notch or foramen of frontal bone - - - - FMA - - - - - first intercostal branch of internal thoracic artery - FMA:10652 + + + A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp. + ISBN:9780323393225 + Wikipedia:Frontal_bone + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10653 - second intercostal branch of internal thoracic artery - UBERON:0039842 - second anterior intercostal artery + + + + + + + + + A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus. + + + 2026-03-19T00:00:00Z + + supraspinous fossa of scapula - - - - FMA - - - - - second intercostal branch of internal thoracic artery - FMA:10653 + + + A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus. + ISBN:9780323393225 + Wikipedia:Scapula + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10654 - third intercostal branch of internal thoracic artery - UBERON:0039843 - third anterior intercostal artery + + + + + + + + + A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments. + + + 2026-03-19T00:00:00Z + + sustentaculum tali of calcaneus - - - - FMA - - - - - third intercostal branch of internal thoracic artery - FMA:10654 + + + A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments. + ISBN:9780323393225 + Wikipedia:Calcaneus + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10655 - fourth intercostal branch of internal thoracic artery - UBERON:0039844 - fourth anterior intercostal artery + + + + + + + + + A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence. + + + 2026-03-19T00:00:00Z + + tibial plateau of tibia - - - - FMA - - - - - fourth intercostal branch of internal thoracic artery - FMA:10655 + + + A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence. + ISBN:9780323393225 + Wikipedia:Tibia + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10656 - fifth intercostal branch of internal thoracic artery - UBERON:0039845 - fifth anterior intercostal artery + + + + + + + + + A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae. + + + 2026-03-19T00:00:00Z + + transverse costal facet of eighth thoracic vertebra - - - - FMA - - - - - fifth intercostal branch of internal thoracic artery - FMA:10656 + + + A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10657 - sixth intercostal branch of internal thoracic artery - UBERON:0039846 - sixth anterior intercostal artery + + + + + + + + + A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable. + + + 2026-03-19T00:00:00Z + + transverse costal facet of eleventh thoracic vertebra - - - - FMA - - - - - sixth intercostal branch of internal thoracic artery - FMA:10657 + + + A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - FMA:10663 - transverse scapular artery - UBERON:0039847 - suprascapular artery + + + + + + + + + A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5. + + + 2026-03-19T00:00:00Z + + transverse costal facet of fifth thoracic vertebra - - - - - - - - - FMA - - - - transverse scapular artery - FMA:10663 + + + A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - FMA:10787 - UBERON:0039848 - anterior external vertebral venous plexus + + + + + + + + + A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib. + + + 2026-03-19T00:00:00Z + + transverse costal facet of first thoracic vertebra - - - - FMA + + + A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - FMA:12852 - UBERON:0039849 - posterior external vertebral venous plexus + + + + + + + + + A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column. + + + 2026-03-19T00:00:00Z + + transverse costal facet of fourth thoracic vertebra - - - - FMA + + + A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - FMA:13279 - anterior bronchopulmonary segment of left pulmonary artery - anterior segmental artery of left lung - anterior segmental artery of left upper lobe - UBERON:0039850 - left anterior segmental artery + A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent. + + + 2026-03-19T00:00:00Z + + transverse costal facet of ninth thoracic vertebra - - - anterior bronchopulmonary segment of left pulmonary artery - FMA:13279 - - - - - anterior segmental artery of left lung - FMA:13279 - - - - - anterior segmental artery of left upper lobe - FMA:13279 + + + A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - FMA:13281 - apicoposterior artery of left lung - apicoposterior bronchopulmonary segment of left pulmonary artery - left apicoposterior pulmonary artery - UBERON:0039851 - apicoposterior segmental artery + + + + + + + + + A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column. + + + 2026-03-19T00:00:00Z + + transverse costal facet of second thoracic vertebra - - - - FMA - - - - - apicoposterior artery of left lung - FMA:13281 - - - - - apicoposterior bronchopulmonary segment of left pulmonary artery - FMA:13281 - - - - - left apicoposterior pulmonary artery - FMA:13281 + + + A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - - + + - - + + - Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. - FMA:14342 - UBERON:0039856 - right ovarian vein + A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae. + + + 2026-03-19T00:00:00Z + + transverse costal facet of seventh thoracic vertebra - - - - - - - - - FMA - - - - - - FMA - - + - Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. - FMA:14342 + A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - - + + - Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. - FMA:14347 - UBERON:0039857 - left ovarian vein + A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability. + + + 2026-03-19T00:00:00Z + + transverse costal facet of sixth thoracic vertebra - - - - FMA - - - + - Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. - FMA:14347 + A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - + + - + + A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib. + + + 2026-03-19T00:00:00Z + + transverse costal facet of tenth thoracic vertebra + + + + + A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + - A parallel fiber results from the axon of a cerebellar granule cell ascending through the molecular layer where it synapses on the dendritic branches of Purkinje cells and stellate cells. - 2023-07-10T11:45:59Z - UBERON:0700019 - This a grouping class for parallel fibers in any species. If annotating a parallel fiber in any species other than teleost fish, consider using 'parallel fiber, bifurcated'. - parallel fiber + A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration. + + + 2026-03-19T00:00:00Z + + transverse costal facet of third thoracic vertebra - + - A parallel fiber results from the axon of a cerebellar granule cell ascending through the molecular layer where it synapses on the dendritic branches of Purkinje cells and stellate cells. - GO:1990032 - doi:10.1007/978-94-007-1333-8_63 + A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - A parallel fiber that results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium. - - 2023-07-10T11:53:19Z - UBERON:0700020 - parallel fiber, bifurcated + + + + + + + + + A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum. + + + 2026-03-19T00:00:00Z + + transverse ridges of sternum - + - A parallel fiber that results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium. - GO:1990032 + A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum. + ISBN:9780323393225 + Wikipedia:Sternum + https://fipat.library.dal.ca/ta2/ - + - - + + - + - Subdivision of the head consisting of the area along the lower edge of the chin. - - - UBERON:1000000 - - chin ventral margin + A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater. + + + 2026-03-19T00:00:00Z + + trigeminal impression of petrous part of temporal bone - + - Subdivision of the head consisting of the area along the lower edge of the chin. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ - + - - + + - + - A collection of hairs that grows on the vertex (top of head). - - - collection of hair on cranium - cranial hair - head hair - UBERON:1000001 - - collection of hairs on vertex + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger. + + + 2026-03-19T00:00:00Z + + tuberosity of fifth distal phalanx of hand - + - A collection of hairs that grows on the vertex (top of head). - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ - + - - + + - - + + - The middle part of the head, located approximately equidistant from the left and the right sides of the head. - - - cranial midline - UBERON:1000002 - - cranial midline area + A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate. + + + 2026-03-19T00:00:00Z + + tuberosity of first distal phalanx of hand - + - The middle part of the head, located approximately equidistant from the left and the right sides of the head. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ - + - - - A longitudinal flap of skin that hangs beneath the lower jaw or neck. - SCTID:13622004 - Wikipedia:Dewlap - UBERON:1000003 - - Compare with: comb and wattle - dewlap + + + + + + + + + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail. + + + 2026-03-19T00:00:00Z + + tuberosity of fourth distal phalanx of hand - + - A longitudinal flap of skin that hangs beneath the lower jaw or neck. - Wikipedia:Dewlap + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - + + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate. + + + 2026-03-19T00:00:00Z + + tuberosity of second distal phalanx of hand + + + + + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + - A collection of hairs that grows on the external ear. - - - external ear hair - UBERON:1000004 - - collection of hair on external ear + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed. + + + 2026-03-19T00:00:00Z + + tuberosity of third distal phalanx of hand - + - A collection of hairs that grows on the external ear. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed. + ISBN:9780323393225 + Wikipedia:Phalanx_bone + https://fipat.library.dal.ca/ta2/ - + - - + + - + - Area along the edge of the external ear. - - - UBERON:1000005 - - external ear margin - https://github.com/obophenotype/uberon/issues/1795 + A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus. + + + 2026-03-19T00:00:00Z + + tympanic caniliculus of petrous part of temporal bone - + - Area along the edge of the external ear. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 - https://orcid.org/0000-0002-2825-0621 + A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - + - A collection of hairs that grows on the forehead. - - - UBERON:1000006 - - collection of hair on forehead + A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark. + + + 2026-03-19T00:00:00Z + + vertebra prominens of seventh cervical vertebra - + - A collection of hairs that grows on the forehead. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - A bulge, knob, or swelling that protrudes from the forehead. - - - UBERON:1000007 - - forehead protuberance + A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly. + + + 2026-03-19T00:00:00Z + + vertebral arch of eighth thoracic vertebra - + - A bulge, knob, or swelling that protrudes from the forehead. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - + + - - + + - Subdivision of the head consisting of the left half of the face, vertically divided. - - - UBERON:1000008 - - left part of face + A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels. + + + 2026-03-19T00:00:00Z + + vertebral arch of eleventh thoracic vertebra - + - Subdivision of the head consisting of the left half of the face, vertically divided. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - - + + - A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head. - - - UBERON:1000009 - - midline crest + A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally. + + + 2026-03-19T00:00:00Z + + vertebral arch of fifth cervical vertebra - + - A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - + + - - + + - A benign tumor on the skin, usually with darker pigment. - An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO] - EFO:0000625 - MESH:D009506 - MPATH:361 - TAO:0005043 - Wikipedia:Melanocytic_nevus - ZFA:0005043 - naevus - nevus - melanocytic nevus - UBERON:1000010 - - - mole + A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests. + + + 2026-03-19T00:00:00Z + + vertebral arch of fifth lumbar vertebra - - - - - - - - - ZFA - - + - A benign tumor on the skin, usually with darker pigment. - Wikipedia:Melanocytic_nevus - - - - - An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO] - 2012-08-14 - TAO:0005043 - TAO - ZFIN:curator - - - - - MESH:D009506 - - - - - - - naevus - ZFA:0005043 - - - - - nevus - ZFA:0005043 + A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - Anatomical structure consisting of either corner of the mouth. - FMA:277716 - Wikipedia:Labial_commissure_of_mouth - commissura labiorum oris - commissural lip - corner of mouth - UBERON:1000011 - - labial commissure - http://upload.wikimedia.org/wikipedia/commons/9/90/Commissurebeforeandafter.jpg + A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5. + + + 2026-03-19T00:00:00Z + + vertebral arch of fifth thoracic vertebra - + - Anatomical structure consisting of either corner of the mouth. - Wikipedia:Labial_commissure_of_mouth - - - - - commissura labiorum oris - Wikipedia:Labial_commissure_of_mouth - + A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - Subdivision of the head consisting of the area along the front edge of the external nose. - - - UBERON:1000012 - - nose anterior margin + A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction. + + + 2026-03-19T00:00:00Z + + vertebral arch of first lumbar vertebra - + - Subdivision of the head consisting of the area along the front edge of the external nose. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - The extreme point of curvature of the external nose. - - - UBERON:1000013 - - nose vertex + A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments. + + + 2026-03-19T00:00:00Z + + vertebral arch of first thoracic vertebra - + - The extreme point of curvature of the external nose. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - + + - - + + - Subdivision of the head consisting of the right half of the face, vertically divided. - - - UBERON:1000014 - - right part of face + A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally. + + + 2026-03-19T00:00:00Z + + vertebral arch of fourth cervical vertebra - + - Subdivision of the head consisting of the right half of the face, vertically divided. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - + - A zone of skin that is part of the snout. - - - EMAPA:37746 - MA:0003079 - snout skin - UBERON:1000015 - - skin of snout + A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament. + + + 2026-03-19T00:00:00Z + + vertebral arch of fourth lumbar vertebra - + - A zone of skin that is part of the snout. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 - - - - - EMAPA:37746 - MA:th - - - - - snout skin - MA:0003079 + A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - Subdivision of the head consisting of the pointed or rounded end or extremity of the snout. - - - UBERON:1000016 - - tip of snout + A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below. + + + 2026-03-19T00:00:00Z + + vertebral arch of fourth thoracic vertebra - + - Subdivision of the head consisting of the pointed or rounded end or extremity of the snout. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + - Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear. - - - UBERON:1000017 - - tip of external ear + A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series. + + + 2026-03-19T00:00:00Z + + vertebral arch of ninth thoracic vertebra - + - Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - A small collection or tuft of hairs. - - - tuft of hair - UBERON:1000018 - - cluster of hairs + + + A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas. + + + 2026-03-19T00:00:00Z + + vertebral arch of second cervical vertebra - + - A small collection or tuft of hairs. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas. + ISBN:9780323393225 + Wikipedia:Axis_(anatomy) + https://fipat.library.dal.ca/ta2/ - + - - - The top of the head. - in the FMA, vertex is a point and not a subdivision - - - FMA:46484 - SCTID:362616002 - vertex of head - vertex - UBERON:1000019 - - top of head + + + + + + + + + A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae. + + + 2026-03-19T00:00:00Z + + vertebral arch of second lumbar vertebra - + - The top of the head. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 - - - - - in the FMA, vertex is a point and not a subdivision - FMA - - - - - vertex of head - FMA:46484 - - - - - vertex - FMA:46484 + A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - + - A collection of hairs that grows on the snout. - - - 2012-02-05T05:21:29Z - UBERON:1000020 - - collection of hair on snout + A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature. + + + 2026-03-19T00:00:00Z + + vertebral arch of second thoracic vertebra - + - A collection of hairs that grows on the snout. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 + A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - + - A zone of skin that is part of the face. - - - 2012-02-05T05:23:01Z - EMAPA:36657 - FMA:24758 - NCIT:C33561 - SCTID:361703006 - UMLS:C0222084 - face skin - facial skin - UBERON:1000021 - - - skin of face + A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine. + + + 2026-03-19T00:00:00Z + + vertebral arch of seventh cervical vertebra - + - A zone of skin that is part of the face. - UBERON:EJS - https://github.com/obophenotype/uberon/issues/34 - - - - - UMLS:C0222084 - ncithesaurus:Skin_of_the_Face - - - - - face skin - EMAPA:36657 - FMA:24758 + A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - + + - - + + - A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal. - Zymbal's glands are located beneath squamous epithelium at the anterior and posterior aspect of the ear canal, and as a single external gland that is located anterior and ventral to the base of the external ear canal. The bilateral Zymbal's glands are adjacent to the auditory canal and are made up of several lobules of modified sebaceous glands - http://ratguide.com/health/neoplasia/zymbals_gland_tumor.php. - located anterior and ventral to the exterior ear canal in rodents[MP:0013384] - EMAPA:37808 - MA:0002900 - NCIT:C77954 - SCTID:105587007 - UMLS:C0687056 - Zymbal gland - auditory sebaceous gland - gland of Zymbal - UBERON:1000022 - Zymbal's gland + A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7. + + + 2026-03-19T00:00:00Z + + vertebral arch of seventh thoracic vertebra - - - - - - - - - ISBN:0123813611 - MA - - - - - - cjm - - + - A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal. - ISBN:0123813611 - MP:0013384 - http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/zymbalgland.html - - - - - EMAPA:37808 - MA:th - - - - - UMLS:C0687056 - ncithesaurus:Zymbal_Gland - - - - - Zymbal gland - MA:0002900 - - - - - auditory sebaceous gland - ISBN:0123813611 + A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages. + + + + + + + + + A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles. - EMAPA:35805 - FMA:15845 - MA:0002487 - NCIT:C33603 - SCTID:13515001 - UMLS:C0229691 - Malpighian corpuscles - pulp of spleen - splenic pulp - UBERON:1000023 - - spleen pulp + + 2026-03-19T00:00:00Z + + vertebral arch of sixth cervical vertebra - - - - - - - - - FMA - - + - The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages. - ncithesaurus:Splenic_Pulp - - - - - UMLS:C0229691 - ncithesaurus:Splenic_Pulp - - - - - Malpighian corpuscles - FMA:15845 + A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - + - A parenchyma that is part of a spleen. - FMA:16029 - splenic parenchyma - UBERON:1000024 - parenchyma of spleen + A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib. + + + 2026-03-19T00:00:00Z + + vertebral arch of sixth thoracic vertebra - + - A parenchyma that is part of a spleen. - OBOL:automatic - - - - - splenic parenchyma - FMA:16029 + A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - - - - - - - - - - - + + - - + + - An anatomical junction between two parts of the digestive tract. + A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology. + - 2021-02-05T11:19:31Z - UBERON:1100000 - digestive tract junction + 2026-03-19T00:00:00Z + + vertebral arch of tenth thoracic vertebra - + - An anatomical junction between two parts of the digestive tract. - https://orcid.org/0000-0002-7073-9172 + A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa. - https://github.com/obophenotype/uberon/issues/3326 - - 2025-01-15T10:00:00Z - dragon-ai-agent - FMA:16532 - ileocaecal fold - UBERON:1200000 - ileocecal fold + + + + + + + + + A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally. + + + 2026-03-19T00:00:00Z + + vertebral arch of third cervical vertebra - + - A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa. - https://en.wikipedia.org/wiki/Ileocecal_fold + A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally. + ISBN:9780323393225 + Wikipedia:Cervical_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - - The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra. - https://github.com/obophenotype/uberon/issues/3618 - - 2025-11-03T00:00:00Z - dragon-ai-agent - L6 dorsal root ganglion - sixth lumbar spinal ganglion - UBERON:1200001 - - sixth lumbar dorsal root ganglion + + + + + + + + + A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles. + + + 2026-03-19T00:00:00Z + + vertebral arch of third lumbar vertebra - + - The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra. - PMID:18316160 + A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles. + ISBN:9780323393225 + Wikipedia:Lumbar_vertebrae + https://fipat.library.dal.ca/ta2/ - + - - + + - + + A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region. + + + 2026-03-19T00:00:00Z + + vertebral arch of third thoracic vertebra + + + + + A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + + A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation. + + + 2026-03-19T00:00:00Z + + vertebral arch of twelfth thoracic vertebra + + + + + A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation. + ISBN:9780323393225 + Wikipedia:Thoracic_vertebrae + https://fipat.library.dal.ca/ta2/ + + + + + + + + - - + + - A region of the carotid artery wall composed of the tunica intima and tunica media. - https://github.com/obophenotype/uberon/issues/3629 - - 2025-11-14T00:00:00Z - dragon-ai-agent - carotid intima-media - UBERON:1200002 - carotid artery intima-media region + A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface. + + + 2026-03-19T00:00:00Z + + zygomatic process of squamous part of temporal bone - + - A region of the carotid artery wall composed of the tunica intima and tunica media. - PMID:39416432 - - - - - carotid intima-media - PMID:39416432 + A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface. + ISBN:9780323393225 + Wikipedia:Temporal_bone + https://fipat.library.dal.ca/ta2/ - + - - - + + - + - The superior, dome-shaped portion of the uterus. - https://github.com/obophenotype/uberon/issues/3637 - - 2025-12-03T00:00:00Z - dragon-ai-agent - fundus of uterus - fundus uteri - UBERON:1200003 - uterine fundus + A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek. + + + 2026-03-19T00:00:00Z + + zygomaticofacial foramen of zygomatic bone - + - The superior, dome-shaped portion of the uterus. - PMID:40653088 - PMID:41204538 - - - - - fundus uteri - PMID:39112955 - + A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek. + ISBN:9780323393225 + Wikipedia:Zygomatic_bone + https://fipat.library.dal.ca/ta2/ @@ -749254,7 +756425,7 @@ Seems out of scope for uberon and/or not very useful as a class. - + Elastoidin fin ray that is slender, sometimes branched distally and present in the embryonic fin fold. Actinotrichia are translucent and exhibit birefringence. This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon ZFA:0000089 @@ -749264,14 +756435,14 @@ Seems out of scope for uberon and/or not very useful as a class. Actinotrichia are required for lepidotrichium development. They are occasionally retained in adult fishes. Further taxon comments from Witten & Huysseune (2007): 'Actinotrichia are found in the embryonic fin fold, along the outer edge of the fin in Actinopterygii, and in the adipose fin in teleosts (Starck 1979; Géraudie and Meunier 1982; Becerra et al. 1983). Only in polypterids has their presence been reported in the joints between adjacent lepidotrichial elements (Géraudie 1988). In the sarcopterygian lineage, actinotrichia are present in coelacanths (Géraudie and Meunier 1980) and in young dipnoans (Arratia et al. 2001).' actinotrichium - + - + PHENOSCAPE:pm @@ -756641,7 +763812,7 @@ Seems out of scope for uberon and/or not very useful as a class. - + Hindbrain nucleus in the tegmental region of rhombomere 1. The cells of the nucleus are granular and lie at the ventral border of the cerebellum and brain stem. This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon TAO:0000551 @@ -756649,14 +763820,14 @@ Seems out of scope for uberon and/or not very useful as a class. UBERON:2000551 nucleus lateralis valvulae - + - + michaelerice PMID:2040726 @@ -757453,8 +764624,8 @@ Seems out of scope for uberon and/or not very useful as a class. - - + + Brain structure which is caudally attached to the rostral medulla oblongata and extends into the tectal ventricle. The valvula cerebelli consists of a granular and a molecular layer along with aggregations of large Purkinje and eurydendroid cells and is uniquely present in ray-finned fishes. From Neuroanatomy of the Zebrafish Brain. This class was sourced from an external ontology (teleost_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon TAO:0000603 @@ -757464,24 +764635,24 @@ Seems out of scope for uberon and/or not very useful as a class. UBERON:2000603 valvula cerebelli - + - + - + ZFA - + michaelerice PMID:2040726 @@ -767654,7 +774825,7 @@ Seems out of scope for uberon and/or not very useful as a class. - + @@ -767669,14 +774840,14 @@ Seems out of scope for uberon and/or not very useful as a class. UBERON:2001053 future internal carotid artery - + - + EHDAA2 @@ -769951,7 +777122,7 @@ Seems out of scope for uberon and/or not very useful as a class. - + @@ -769964,14 +777135,14 @@ Seems out of scope for uberon and/or not very useful as a class. UBERON:2001200 corpuscles of Stannius - + - + http://jeb.biologists.org/content/177/1/243.short @@ -811677,7 +818848,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - + @@ -811689,7 +818860,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol UBERON:3000519 pseudodentary tooth - + @@ -811701,7 +818872,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - + cjm @@ -812864,7 +820035,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - + @@ -812876,7 +820047,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol UBERON:3000642 maxillopalatine tooth - + @@ -812888,7 +820059,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - + cjm @@ -826243,7 +833414,7 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - + @@ -826255,14 +833426,14 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol UBERON:3010620 dilatator laryngis - + - + cjm @@ -826638,20 +833809,20 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - + Hyobranchial muscle used in swallowing. This class was sourced from an external ontology (amphibian_anatomy). Its definitions, naming conventions and relationships may need to be checked for compatibility with uberon UBERON:3010650 cephalodorsosubpharyngeus - + - + cjm @@ -835956,12 +843127,6 @@ This may be the same as CoBL. incorrectly generalized to teleosts so being obsol - - - - - - @@ -847099,7 +854264,7 @@ formulas. Modified from Cooper and Dawson 2009. - + Head segment derived from the second embryonic segment (between the labral and antennal segments). In the larva, this segment includes Bolwig's organ. FBbt:00000005 @@ -847107,14 +854272,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:6000005 insect ocular segment - + - + cjm @@ -847243,7 +854408,7 @@ formulas. Modified from Cooper and Dawson 2009. Segment anterior to the intercalary segment. In the adult it bears the antennae. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -847390,7 +854555,7 @@ formulas. Modified from Cooper and Dawson 2009. The first (most anterior) segment of the thorax. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -847417,7 +854582,7 @@ formulas. Modified from Cooper and Dawson 2009. The second (middle) segment of the thorax. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -847444,7 +854609,7 @@ formulas. Modified from Cooper and Dawson 2009. The third (most posterior) segment of the thorax. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -847576,7 +854741,7 @@ formulas. Modified from Cooper and Dawson 2009. Paired appendage of the eggshell, located on the anterior-dorsal side of the egg, just posterior to the operculum. Functions as a respiratory structures. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -847652,20 +854817,20 @@ formulas. Modified from Cooper and Dawson 2009. - + FBbt:00000104 ventral plate UBERON:6000104 insect mesoderm anlage - + - + cjm @@ -847733,7 +854898,7 @@ formulas. Modified from Cooper and Dawson 2009. The region of the ectoderm anterior to the cephalic furrow. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -847778,7 +854943,7 @@ formulas. Modified from Cooper and Dawson 2009. P2 TrMes - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848234,7 +855399,7 @@ formulas. Modified from Cooper and Dawson 2009. Prothoracic segment of the embryo. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848273,7 +855438,7 @@ formulas. Modified from Cooper and Dawson 2009. Mesothoracic segment of the embryo. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848312,7 +855477,7 @@ formulas. Modified from Cooper and Dawson 2009. Metathoracic segment of the embryo. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848348,7 +855513,7 @@ formulas. Modified from Cooper and Dawson 2009. Abdomen of the embryo. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848548,7 +855713,7 @@ formulas. Modified from Cooper and Dawson 2009. embryonic nervous system - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848585,7 +855750,7 @@ formulas. Modified from Cooper and Dawson 2009. embryonic central nervous system - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -848635,7 +855800,7 @@ formulas. Modified from Cooper and Dawson 2009. P2 VisSys - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -851786,7 +858951,7 @@ formulas. Modified from Cooper and Dawson 2009. The posteriorly oriented trichome of a cell of the wing blade. Each cell makes one of these trichomes at its posterior vertex. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -852223,7 +859388,7 @@ formulas. Modified from Cooper and Dawson 2009. The dorsal sclerites (tergites) of the mesothorax. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -852586,7 +859751,7 @@ formulas. Modified from Cooper and Dawson 2009. Non-innervated projection of the cuticle around an actin-rich cellular process of an underlying epidermal cell. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -852738,7 +859903,7 @@ formulas. Modified from Cooper and Dawson 2009. P2 TrachP - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -852968,28 +860133,16 @@ formulas. Modified from Cooper and Dawson 2009. - + Section of the insect foregut anterior to the esophagus. FBbt:00005380 UBERON:6005380 insect pharynx - + - - - - - parent may be obsoleted - - - - - - FBbt - @@ -853003,6 +860156,18 @@ formulas. Modified from Cooper and Dawson 2009. FBbt:00005380 + + + + + parent may be obsoleted + + + + + + FBbt + @@ -853255,7 +860420,7 @@ formulas. Modified from Cooper and Dawson 2009. A AdCly - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853309,7 +860474,7 @@ formulas. Modified from Cooper and Dawson 2009. P2 iVenEp - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853356,7 +860521,7 @@ formulas. Modified from Cooper and Dawson 2009. P2 CardMes - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853394,7 +860559,7 @@ formulas. Modified from Cooper and Dawson 2009. P2 VenEc - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853413,7 +860578,7 @@ formulas. Modified from Cooper and Dawson 2009. The sum of all the structures in the embryo that will develop into the embryonic/larval tracheal system. This corresponds to the tracheal primordia and their component tracheal branch primordia along with primordia of the spiracles. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853425,7 +860590,7 @@ formulas. Modified from Cooper and Dawson 2009. embryonic tracheal system - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853518,7 +860683,7 @@ formulas. Modified from Cooper and Dawson 2009. P1 BolOrg - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853619,8 +860784,8 @@ formulas. Modified from Cooper and Dawson 2009. Region of the dorsal mesothoracic disc that will develop into the mesothoracic tergum. - FBC:DOS FlyBase:FBrf0027793 + https://orcid.org/0000-0002-7073-9172 @@ -853688,7 +860853,7 @@ formulas. Modified from Cooper and Dawson 2009. The region of the ectoderm posterior to the cephalic furrow. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853781,7 +860946,7 @@ formulas. Modified from Cooper and Dawson 2009. The sum of all the developing presumptive components of a specific embryonic/larval system in an embryo. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853924,7 +861089,7 @@ formulas. Modified from Cooper and Dawson 2009. Sensillum which is embedded in the body wall and has a specific cuticular structure involved in the transduction of some sensory signal as a part. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -853974,7 +861139,7 @@ formulas. Modified from Cooper and Dawson 2009. Sensillum that is internal to the animal - i.e. having no part that is part of the cuticle. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854192,7 +861357,7 @@ formulas. Modified from Cooper and Dawson 2009. A region of cuticle and its underlying epidermis. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854216,7 +861381,7 @@ formulas. Modified from Cooper and Dawson 2009. A segmental subdivision of the integument of the whole animal. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854280,7 +861445,7 @@ formulas. Modified from Cooper and Dawson 2009. The part of some organism that is part of some specified segment. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854310,7 +861475,7 @@ formulas. Modified from Cooper and Dawson 2009. Sense organ that is internal to the animal - i.e. having no part that is part of the cuticle. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854340,7 +861505,7 @@ formulas. Modified from Cooper and Dawson 2009. A region of an epithelium that folds inwards from the epithelial plane to form a furrow. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854539,7 +861704,7 @@ formulas. Modified from Cooper and Dawson 2009. The sum of all the anlagen and primordia that will develop into a single system. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -854553,7 +861718,7 @@ formulas. Modified from Cooper and Dawson 2009. - + @@ -854640,8 +861805,8 @@ formulas. Modified from Cooper and Dawson 2009. A closely associated group of synaptic neuropil domains. - FBC:DOS FBC:KI + https://orcid.org/0000-0002-7073-9172 @@ -854695,7 +861860,7 @@ formulas. Modified from Cooper and Dawson 2009. A row of sensilla. - FBC:DOS + https://orcid.org/0000-0002-7073-9172 @@ -857130,6 +864295,78 @@ formulas. Modified from Cooper and Dawson 2009. + + + + + + + + + + + + + + + + + + A ridge or similar projection on the lateral side of the cranium that crosses the zygomatic bone and extends to the maxilla and ends on the facial tubercle (tuber faciale). + very prominent in ruminants and equids; short in carnivorans and pigs: https://www.imaios.com/en/vet-anatomy/anatomical-structures/facial-crest-11073890400# + https://orcid.org/0000-0003-2699-3066 + crista facialis + UBERON:7500131 + facial crest + + + + + A ridge or similar projection on the lateral side of the cranium that crosses the zygomatic bone and extends to the maxilla and ends on the facial tubercle (tuber faciale). + https://orcid.org/0000-0001-8415-4848 + + + + + + + + + + + + + + + The region of the cranial cavity above the sella turcica. + + 0000-0002-0819-0473 + entire suprasellar region + suprasellar part of cranial cavity + UBERON:7770000 + suprasellar region + + + + + The region of the cranial cavity above the sella turcica. + NCIT:C42602 + + + + + entire suprasellar region + SNOMEDCT:368554001 + + + + + suprasellar part of cranial cavity + FMA:322222 + + + + @@ -857575,19 +864812,19 @@ formulas. Modified from Cooper and Dawson 2009. - - + + A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles. Purkinje fibre network UBERON:8000009 Purkinje fiber network - + - + @@ -857602,7 +864839,7 @@ formulas. Modified from Cooper and Dawson 2009. - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -857610,7 +864847,7 @@ formulas. Modified from Cooper and Dawson 2009. - + https://github.com/obophenotype/uberon/issues/1785 https://orcid.org/0000-0001-5208-3432 https://orcid.org/0000-0002-9791-0064 @@ -857630,10 +864867,154 @@ formulas. Modified from Cooper and Dawson 2009. + + + + + + + + + + + + + + + + + A lobule of a salivary gland consisting of the ducto-acinar unit and the secretory acini together with their contiguous ductal segments, including the intercalated duct and striated duct, together with associated myoepithelial cells, stromal tissue, and vasculature. This structural-functional unit is responsible for the production of primary saliva by the acinar cells and its ionic modification during transit through the ductal segments. + https://github.com/obophenotype/uberon/issues/3657 + salivon + salivary gland ducto-acinar + UBERON:8000010 + + Also known as the "salivon" in classical salivary physiology literature. The three major salivary glands (parotid, submandibular, sublingual) contain gland-specific variants of this unit that differ in acinar cell composition (serous vs. mucous vs. mixed). + salivary gland ducto-acinar unit + + + + + A lobule of a salivary gland consisting of the ducto-acinar unit and the secretory acini together with their contiguous ductal segments, including the intercalated duct and striated duct, together with associated myoepithelial cells, stromal tissue, and vasculature. This structural-functional unit is responsible for the production of primary saliva by the acinar cells and its ionic modification during transit through the ductal segments. + PMID:24862590 + PMID:30855909 + + + + + + + + + + + + + + + A salivary gland ducto-acinar unit that is part of the parotid gland, consisting of purely serous acini together with their contiguous intercalated and striated ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a watery, protein-rich serous saliva. + https://github.com/obophenotype/uberon/issues/3657 + parotid gland ducto-acinar + UBERON:8000011 + + parotid gland ducto-acinar unit + + + + + A salivary gland ducto-acinar unit that is part of the parotid gland, consisting of purely serous acini together with their contiguous intercalated and striated ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a watery, protein-rich serous saliva. + PMID:24862590 + PMID:30855909 + + + + + + + + + + + + + + + A salivary gland ducto-acinar unit that is part of the sublingual gland, consisting of predominantly mucous acini (with minor serous demilunes) together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a viscous, mucin-rich saliva. + https://github.com/obophenotype/uberon/issues/3657 + sublingual gland ducto-acinar + UBERON:8000012 + + sublingual gland ducto-acinar unit + + + + + A salivary gland ducto-acinar unit that is part of the sublingual gland, consisting of predominantly mucous acini (with minor serous demilunes) together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a viscous, mucin-rich saliva. + PMID:24862590 + PMID:30855909 + + + + + + + + + + + + + + + A salivary gland ducto-acinar unit that is part of the submandibular gland, consisting of a mixture of predominantly serous acini with a minority of mucous acini, together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a mixed serous-mucous saliva. + https://github.com/obophenotype/uberon/issues/3657 + submandibular gland ducto-acinar + UBERON:8000013 + + submandibular gland ducto-acinar unit + + + + + A salivary gland ducto-acinar unit that is part of the submandibular gland, consisting of a mixture of predominantly serous acini with a minority of mucous acini, together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a mixed serous-mucous saliva. + PMID:24862590 + PMID:30855909 + + + + + + + + + + + + + + + A multi-tissue anatomical complex that constitutes the attachment zone between the gingival tissue and the tooth surface, comprising the junctional epithelium, the supracrestal connective tissue attachment fibers, and supporting stromal and vascular elements. This structure seals the periodontal space from the oral cavity and serves as the primary physical and biological interface anchoring the free and attached gingiva to the tooth. + https://github.com/obophenotype/uberon/issues/3657 + dentogingival complex + gingival attachment + supracrestal tissue attachment + UBERON:8000014 + + dentogingival junction + + + + + A multi-tissue anatomical complex that constitutes the attachment zone between the gingival tissue and the tooth surface, comprising the junctional epithelium, the supracrestal connective tissue attachment fibers, and supporting stromal and vascular elements. This structure seals the periodontal space from the oral cavity and serves as the primary physical and biological interface anchoring the free and attached gingiva to the tooth. + ISBN:9780323096300 + PMID:38876998 + + + + - @@ -857659,7 +865040,6 @@ formulas. Modified from Cooper and Dawson 2009. - @@ -857691,7 +865071,6 @@ formulas. Modified from Cooper and Dawson 2009. - @@ -857723,7 +865102,6 @@ formulas. Modified from Cooper and Dawson 2009. - @@ -857755,7 +865133,6 @@ formulas. Modified from Cooper and Dawson 2009. - @@ -857793,7 +865170,6 @@ formulas. Modified from Cooper and Dawson 2009. - @@ -858031,7 +865407,7 @@ formulas. Modified from Cooper and Dawson 2009. - + The region of the hepatic acinus that is closest to the arterial blood supply and has the highest oxygen concentration. Zone 1 is located in the periportal region of the liver lobule, closest to the portal triad. Hepatocytes in this region are primarily involved in oxidative energy metabolism. @@ -858040,14 +865416,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:8400001 hepatic acinus zone 1 - + - + PMID:28126520 @@ -858075,7 +865451,7 @@ formulas. Modified from Cooper and Dawson 2009. - + The region of the hepatic acinus immediately surrounding the central veins. This region has the lowest oxygen concentration in the acinus. Zone 3 is located in the centrilobular region of the liver lobule, closest to the central vein. Hepatocytes in this region are the primary location for the biotransformation of drugs. @@ -858086,14 +865462,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:8400002 hepatic acinus zone 3 - + - + PMID:28126520 @@ -858133,7 +865509,7 @@ formulas. Modified from Cooper and Dawson 2009. - + @@ -858154,14 +865530,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:8400003 hepatic acinus zone 2 - + - + PMID:28126520 @@ -858223,7 +865599,7 @@ formulas. Modified from Cooper and Dawson 2009. - + @@ -858238,14 +865614,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:8400006 liver lobule periportal region - + - + PMID:28126520 @@ -858273,7 +865649,7 @@ formulas. Modified from Cooper and Dawson 2009. - + @@ -858288,14 +865664,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:8400007 liver lobule centrilobular region - + - + PMID:28126520 @@ -858323,7 +865699,7 @@ formulas. Modified from Cooper and Dawson 2009. - + @@ -858344,14 +865720,14 @@ formulas. Modified from Cooper and Dawson 2009. UBERON:8400008 liver lobule midzonal region - + - + PMID:28126520 @@ -869752,6 +877128,99 @@ formulas. Modified from Cooper and Dawson 2009. + + + + + + + + + + + + + + + + + + + + + + + The facial tuberosity (tuber faciale) is a prominence located on the facial surface of the maxilla; it finishes the facial crest and varies much according to the species. + it is well developed in equids; it is above the first molar tooth in ruminants; it is above the second molar tooth in sheep + + tuber faciale + UBERON:8500005 + facial tubercle + + + + + The facial tuberosity (tuber faciale) is a prominence located on the facial surface of the maxilla; it finishes the facial crest and varies much according to the species. + https://www.imaios.com/en/vet-anatomy/anatomical-structure/facial-tuberosity-11073890408 + + + + + + + + + + + + + + + + + + + + + Anatomical point of cranium between nasal process of premaxilla and nasal bone, at the anteriormost end of the suture. + https://orcid.org/0000-0001-8415-4848 + nasoincisive notch + UBERON:8500006 + nasal notch + + + + + Anatomical point of cranium between nasal process of premaxilla and nasal bone, at the anteriormost end of the suture. + isbn:9783830410690 + + + + + + + + + + + + + + + Anatomical point of cranium; the most aboral point of the horizontal part of the palate in the median plane. + https://orcid.org/0000-0001-8415-4848 + UBERON:8500007 + staphylon + + + + + Anatomical point of cranium; the most aboral point of the horizontal part of the palate in the median plane. + isbn:9780873659505 + + + + @@ -875747,6 +883216,30 @@ formulas. Modified from Cooper and Dawson 2009. + + + + + + The outermost layer of the stratified squamous epithelium lining the esophagus, composed of several layers of flattened epithelial cells that are partially or non-keratinized. This layer provides a protective barrier against mechanical and chemical insults, contributing to tissue integrity and regulating permeability through its apical cell membranes and intercellular junctional complexes. + + 2024-11-14T15:10:48Z + UBERON:8700003 + stratum corneum of esophageal epithelium + + + + + The outermost layer of the stratified squamous epithelium lining the esophagus, composed of several layers of flattened epithelial cells that are partially or non-keratinized. This layer provides a protective barrier against mechanical and chemical insults, contributing to tissue integrity and regulating permeability through its apical cell membranes and intercellular junctional complexes. + PMID:21126700 + PMID:26019440 + doi:10.1038/gimo15 + doi:10.1152/ajpgi.00088.2015 + https://en.wikipedia.org/wiki/Stratified_squamous_epithelium + + + + @@ -875812,6 +883305,49 @@ formulas. Modified from Cooper and Dawson 2009. + + + + + + + + + + + + + + + + + + + + + + The epithelium that lines the anorectum. + + 2024-11-18T15:45:29Z + anorectal epithelium + UBERON:8850001 + epithelium of anorectum + + + + + The epithelium that lines the anorectum. + PMID:27042391 + + + + + anorectal epithelium + PMID:27042391 + + + + @@ -878554,14 +886090,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + hagfish have median nostril - + @@ -878575,14 +886111,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:25312359 - + @@ -878596,14 +886132,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + midface division only makes sense for gnathostomes - + @@ -878617,14 +886153,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16417468 - + @@ -878638,14 +886174,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16417468 - + @@ -878749,14 +886285,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ZFS - + @@ -878785,14 +886321,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -878806,14 +886342,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -878872,15 +886408,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + female dbpedia-modified - + @@ -878894,15 +886430,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + male dbpedia-modified - + @@ -878916,14 +886452,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:15843440 - + @@ -878952,14 +886488,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + vertebrates - + @@ -879153,14 +886689,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -879174,14 +886710,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879195,14 +886731,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879216,14 +886752,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879237,14 +886773,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879258,14 +886794,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879279,14 +886815,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA-abduced-lr - + @@ -879300,14 +886836,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + definitional - + @@ -879321,14 +886857,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + myelin not present in all taxa that have a commissure - + @@ -879342,14 +886878,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest - + @@ -879408,14 +886944,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + only in species that have a stomach - + @@ -879459,14 +886995,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia:Vitelline_vein - + @@ -879570,14 +887106,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879631,14 +887167,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -879652,14 +887188,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16313389 - + @@ -879673,15 +887209,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Mammals ISBN:0073040584-table13.1 - + @@ -879695,15 +887231,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Mammals ISBN:0073040584-table13.1 - + @@ -879717,15 +887253,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Urodele ISBN:0073040584-table13.1 - + @@ -879739,15 +887275,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Urodele ISBN:0073040584-table13.1 - + @@ -879761,16 +887297,16 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Anurans ISBN:0073040584-table13.1 XAO - + @@ -879784,15 +887320,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Anurans ISBN:0073040584-table13.1 - + @@ -879806,15 +887342,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Aves ISBN:0073040584-table13.1 - + @@ -879828,15 +887364,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Aves ISBN:0073040584-table13.1 - + @@ -879850,15 +887386,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + pouches 3 and 4 in chick PMID:16313389 - + @@ -879872,15 +887408,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + pouches 3 and 4 in human PMID:16313389 - + @@ -879894,14 +887430,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia:Vitelline_vein - + @@ -879915,15 +887451,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + requires review EHDAA2 - + @@ -879937,15 +887473,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + requires review EHDAA2 - + @@ -879959,15 +887495,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + may be present in other parts in other species FMA - + @@ -880041,15 +887577,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Lateral margin of coccyx and related border of sacrum dbpedia - + @@ -880063,15 +887599,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Lateral margin of coccyx and related border of sacrum dbpedia - + @@ -880085,14 +887621,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + WP - + @@ -880121,14 +887657,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880142,15 +887678,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + proximally Wikipedia - + @@ -880164,15 +887700,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + proximally Wikipedia - + @@ -880186,15 +887722,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + radially Wikipedia - + @@ -880208,15 +887744,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ulnar side Wikipedia - + @@ -880230,15 +887766,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + distally Wikipedia - + @@ -880252,15 +887788,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + distally Wikipedia - + @@ -880274,15 +887810,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + distally Wikipedia - + @@ -880403,14 +887939,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880424,15 +887960,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + right arch 4 in human embryology.ch - + @@ -880446,14 +887982,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880467,14 +888003,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia:Vitelline_vein - + @@ -880488,38 +888024,17 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + - - - - - - - - - - - - - - - - PMID:22179203 - - - - - @@ -880545,14 +888060,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:080184780X - + @@ -880566,14 +888081,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880587,14 +888102,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880608,14 +888123,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880629,14 +888144,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880650,14 +888165,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880671,14 +888186,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880692,14 +888207,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880713,14 +888228,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880734,14 +888249,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -880770,14 +888285,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + WP - + @@ -880791,14 +888306,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:0073040584 - + @@ -880812,14 +888327,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:0073040584 - + @@ -880833,14 +888348,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + http://www.avdc.org/Nomenclature.pdf - + @@ -880854,14 +888369,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA-implied - + @@ -880902,14 +888417,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -880923,14 +888438,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -880944,14 +888459,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + MP - + @@ -880965,14 +888480,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + MP - + @@ -881003,14 +888518,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMC4038951 - + @@ -881024,14 +888539,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:080184780X - + @@ -881045,14 +888560,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881066,14 +888581,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881117,15 +888632,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + teleost NCBIBook:NBK53175 - + @@ -881139,14 +888654,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Euarchontoglires - + @@ -881175,14 +888690,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + evaginated - + @@ -881196,14 +888711,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + evaginated - + @@ -881247,14 +888762,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + https://github.com/obophenotype/uberon/wiki/The-neural-crest - + @@ -881268,14 +888783,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16417468 - + @@ -881289,14 +888804,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881310,14 +888825,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881331,14 +888846,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881369,14 +888884,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -881390,15 +888905,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + UBERON:0011870 or UBERON:0011869 Wikipedia - + @@ -881412,15 +888927,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + hamate Wikipedia - + @@ -881434,14 +888949,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + cjm - + @@ -881472,14 +888987,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + NIFSTD - + @@ -881508,14 +889023,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + MP - + @@ -881529,14 +889044,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + MP - + @@ -881550,14 +889065,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + XAO - + @@ -881571,15 +889086,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:0073040584 Wikipedia - + @@ -881623,14 +889138,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + EHDAA2 - + @@ -881676,14 +889191,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16496288 - + @@ -881697,14 +889212,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881718,14 +889233,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + MP - + @@ -881739,14 +889254,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + JB - + @@ -881760,14 +889275,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16417468 - + @@ -881781,14 +889296,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16417468 - + @@ -881802,14 +889317,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -881823,15 +889338,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + AAO https://github.com/geneontology/go-ontology/issues/16143 - + @@ -881860,14 +889375,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -881881,14 +889396,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -881902,14 +889417,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -881923,14 +889438,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -881944,14 +889459,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -881965,14 +889480,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -881986,14 +889501,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882007,14 +889522,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882028,14 +889543,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882049,14 +889564,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882070,14 +889585,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882091,14 +889606,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882112,14 +889627,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882133,14 +889648,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882154,14 +889669,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882175,14 +889690,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882196,14 +889711,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882217,14 +889732,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882238,14 +889753,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882259,14 +889774,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882280,14 +889795,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882301,14 +889816,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882322,14 +889837,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882343,14 +889858,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882364,14 +889879,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882385,14 +889900,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + shoge-lite - + @@ -882406,14 +889921,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:9780878932504 - + @@ -882495,14 +890010,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -882516,14 +890031,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -882567,14 +890082,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + ISBN:0073040584 - + @@ -882588,14 +890103,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:16417468 - + @@ -882609,14 +890124,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipathways:WP2062 - + @@ -882645,14 +890160,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -882666,14 +890181,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -882717,14 +890232,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + teleosts - + @@ -882738,14 +890253,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Mammals - + @@ -882774,14 +890289,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + EHDAA2 - + @@ -882795,16 +890310,16 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Mammals EHDAA2 ISBN:0073040584-table13.1 - + @@ -882818,15 +890333,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Mammals ISBN:0073040584-table13.1 - + @@ -882840,15 +890355,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Elasmobranchii ISBN:0073040584-table13.1 - + @@ -882862,15 +890377,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Elasmobranchii ISBN:0073040584-table13.1 - + @@ -882884,15 +890399,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Elasmobranchii ISBN:0073040584-table13.1 - + @@ -882906,15 +890421,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Elasmobranchii ISBN:0073040584-table13.1 - + @@ -882928,15 +890443,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Urodele ISBN:0073040584-table13.1 - + @@ -882950,15 +890465,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Urodele ISBN:0073040584-table13.1 - + @@ -882972,15 +890487,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Urodele ISBN:0073040584-table13.1 - + @@ -882994,15 +890509,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Anuran ISBN:0073040584-table13.1 - + @@ -883016,15 +890531,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Turtles ISBN:0073040584-table13.1 - + @@ -883038,15 +890553,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Turtles ISBN:0073040584-table13.1 - + @@ -883060,15 +890575,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Lizard ISBN:0073040584-table13.1 - + @@ -883082,15 +890597,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Lizard ISBN:0073040584-table13.1 - + @@ -883104,15 +890619,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Snakes ISBN:0073040584-table13.1 - + @@ -883126,15 +890641,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Snakes ISBN:0073040584-table13.1 - + @@ -883148,15 +890663,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Aves ISBN:0073040584-table13.1 - + @@ -883170,15 +890685,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Aves ISBN:0073040584-table13.1 - + @@ -883192,14 +890707,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + conservatively place at deuterostome, excluding acoelomates - + @@ -883258,14 +890773,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + MP - + @@ -883279,14 +890794,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + XAO-abduced - + @@ -883300,14 +890815,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -883381,14 +890896,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:3631381 - + @@ -883447,14 +890962,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + AAO - + @@ -883513,14 +891028,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:11997885 - + @@ -883534,15 +891049,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + skin of the upper lip dbpedia - + @@ -883556,14 +891071,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + dbpedia - + @@ -883592,14 +891107,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + DOI:10.1038/ncomms1502 - + @@ -883613,14 +891128,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + DOI:10.1038/ncomms1502 - + @@ -883634,15 +891149,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + EHDAA2 ISBN:9780878932504 - + @@ -883656,15 +891171,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Gallus gallus PMID:17051547 - + @@ -883757,14 +891272,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + DOI:10.1007/BF02547558 - + @@ -883778,15 +891293,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia:Digastric_muscle Wikipedia:Mastoid_process - + @@ -883817,14 +891332,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + cloacal bursa - + @@ -883838,14 +891353,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:11479904 - + @@ -883919,14 +891434,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + Wikipedia - + @@ -883940,14 +891455,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + FMA - + @@ -883961,14 +891476,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:22135653 - + @@ -883982,14 +891497,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:22135653 - + @@ -884003,14 +891518,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:22135653 - + @@ -884070,7 +891585,7 @@ formulas. Modified from Cooper and Dawson 2009. - + @@ -884099,15 +891614,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + 15% WP - + @@ -884121,15 +891636,15 @@ formulas. Modified from Cooper and Dawson 2009. - + - + 85-100% WP - + @@ -884143,16 +891658,16 @@ formulas. Modified from Cooper and Dawson 2009. - + - + in the opossum the panniculus carnosis attaches to the humerus DOI:10.2307/1373999 FEED:rd - + @@ -884196,14 +891711,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + PMID:7559104 - + @@ -884262,14 +891777,14 @@ formulas. Modified from Cooper and Dawson 2009. - + - + EHDAA2 - + diff --git a/uberon.obo b/uberon.obo index a3a62c379..99594734f 100755 --- a/uberon.obo +++ b/uberon.obo @@ -1,8 +1,9 @@ format-version: 1.2 -data-version: releases/2025-12-04 -subsetdef: 1_STAR "" -subsetdef: 2_STAR "" -subsetdef: 3_STAR "" +data-version: releases/2026-04-01 +subsetdef: 1:STAR "" +subsetdef: 2:STAR "" +subsetdef: 3:STAR "" +subsetdef: added_by_HRA "Classes tagged with this subset property were added on request from HuBMAP to support the HuBMAP Human Reference Atlas (HRA)." subsetdef: added_for_HCA "" subsetdef: added_for_HCA "Classes tagged with this subset property were added upon request from the Human Cell Atlas (HCA)." subsetdef: attribute_slim "" @@ -76,7 +77,7 @@ subsetdef: value_slim "" subsetdef: vertebrate_core "core classes typically found across vertebrates. one purpose is to create a rough set of terms that could be used to start a new vertebrate AO" synonymtypedef: blast_name "" synonymtypedef: BRAIN_NAME_ABV "brain name abbreviations (drosophila)" -synonymtypedef: BRAND_NAME "" +synonymtypedef: BRAND:NAME "" synonymtypedef: COMPARATIVE_PREFERRED "preferred term in the context of comparative anatomy" synonymtypedef: DEPRECATED "A historic synonym, no longer encouraged" synonymtypedef: DEVELOPMENTAL "developmental term" @@ -84,12 +85,12 @@ synonymtypedef: equivalent_name "" synonymtypedef: genbank_common_name "" synonymtypedef: Gene-based "" synonymtypedef: HOMOLOGY "a synonym made on the basis of a possibly homologous structure in another species" +synonymtypedef: http://purl.obolibrary.org/obo/chebi/INN "" synonymtypedef: human "" synonymtypedef: HUMAN_PREFERRED "preferred term when talking about an instance of this class in Homo sapiens" synonymtypedef: in_part "" synonymtypedef: INCONSISTENT "indicates that a synonym is used in an inconsistent or confusing way, typically between species" -synonymtypedef: INN "" -synonymtypedef: IUPAC_NAME "" +synonymtypedef: IUPAC:NAME "" synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded" synonymtypedef: NON_AMNIOTE "synonym that is inappropriate for amniotes" synonymtypedef: NON_MAMMAL "synonym that is inappropriate for mammals" @@ -248,7 +249,9 @@ property_value: doap-mailing-list "https://lists.sourceforge.net/lists/listinfo/ property_value: doap-SVNRepository "https://obo.svn.sourceforge.net/svnroot/obo/uberon/" xsd:anyURI property_value: foaf-homepage "http://uberon.org" xsd:anyURI property_value: has_ontology_root_term UBERON:0000104 +property_value: has_ontology_root_term UBERON:0000105 property_value: has_ontology_root_term UBERON:0001062 +property_value: has_ontology_root_term UBERON:0035943 treat-xrefs-as-has-subclass: EHDAA treat-xrefs-as-has-subclass: EV treat-xrefs-as-has-subclass: NCIT @@ -355,6 +358,7 @@ property_value: example_of_usage "the cell wall is disposed to filter chemicals id: BFO:0000017 name: realizable entity is_a: BFO:0000020 ! specifically dependent continuant +is_a: COB:0000502 ! characteristic disjoint_from: BFO:0000019 ! quality relationship: part_of BFO:0000017 {all_only="true"} ! realizable entity property_value: example_of_usage "the disposition of this piece of metal to conduct electricity." xsd:string @@ -432,6 +436,7 @@ disjoint_from: BFO:0000141 ! immaterial entity property_value: editor_note "BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60" xsd:string property_value: editor_note "BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity." xsd:string property_value: editor_note "BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here." xsd:string +property_value: editor_note "Elucidation: An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time." xsd:string property_value: example_of_usage "a flame" xsd:string property_value: example_of_usage "a forest fire" xsd:string property_value: example_of_usage "a human being" xsd:string @@ -634,121 +639,122 @@ is_a: CARO:0000007 ! immaterial anatomical entity id: CHEBI:10545 name: electron def: "Elementary particle not affected by the strong force having a spin 1/2, a negative elementary charge and a rest mass of 0.000548579903(13) u, or 0.51099906(15) MeV." [] -subset: 3_STAR -synonym: "beta" RELATED [IUPAC] -synonym: "beta(-)" RELATED [ChEBI] -synonym: "beta-particle" RELATED [IUPAC] -synonym: "e" RELATED [IUPAC] -synonym: "e(-)" RELATED [UniProt] -synonym: "e-" RELATED [KEGG_COMPOUND] -synonym: "electron" EXACT IUPAC_NAME [ChEBI, IUPAC, KEGG_COMPOUND] -synonym: "Elektron" RELATED [ChEBI] -synonym: "negatron" RELATED [IUPAC] -xref: KEGG:C05359 -xref: PMID:21614077 {source="Europe PMC"} -xref: Wikipedia:Electron +subset: 3:STAR +synonym: "beta" RELATED [iupac] +synonym: "beta(-)" RELATED [chebi] +synonym: "beta-particle" RELATED [iupac] +synonym: "e" RELATED [iupac] +synonym: "e(-)" RELATED [uniprot_ft] +synonym: "e-" RELATED [kegg.compound] +synonym: "electron" EXACT IUPAC:NAME [IUPAC] +synonym: "electron" RELATED IUPAC:NAME [chebi, iupac, kegg.compound] +synonym: "Elektron" RELATED [chebi] +synonym: "negatron" RELATED [iupac] +xref: kegg.compound:C05359 {source="kegg.compound"} +xref: pubmed:21614077 {source="pubmed"} +xref: wikipedia.en:Electron {source="wikipedia.en"} is_a: CHEBI:36338 ! lepton [Term] id: CHEBI:131565 name: steroid aldehyde def: "Any steroid substituted by a formyl group." [] -subset: 3_STAR -synonym: "steroid aldehydes" RELATED [ChEBI] +subset: 3:STAR +synonym: "steroid aldehydes" RELATED [chebi] is_a: CHEBI:17478 ! aldehyde is_a: CHEBI:35341 ! steroid [Term] id: CHEBI:131604 name: Mycoplasma genitalium metabolite -def: "Any bacterial metabolite produced during a metabolic reaction in Mycoplasma genitalium." [] -subset: 3_STAR -synonym: "Mycoplasma genitalium metabolites" RELATED [ChEBI] +def: "Any bacterial metabolite produced during a metabolic reaction in Mycoplasma genitalium." [] +subset: 3:STAR +synonym: "Mycoplasma genitalium metabolites" RELATED [chebi] is_a: CHEBI:76969 ! bacterial metabolite [Term] id: CHEBI:131621 name: C19-steroid def: "A steroid compound with a structure based on a 19-carbon (androstane) skeleton." [] -subset: 3_STAR -synonym: "C19-steroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "C19-steroids" RELATED [chebi] is_a: CHEBI:35341 ! steroid -relationship: has_parent_hydride CHEBI:35509 ! androstane +relationship: RO:0018040 CHEBI:35509 ! has parent hydride androstane [Term] id: CHEBI:131927 name: dicarboxylic acids and O-substituted derivatives def: "A class of carbonyl compound encompassing dicarboxylic acids and any derivatives obtained by substitution of either one or both of the carboxy hydrogens." [] -subset: 3_STAR -synonym: "dicarboxylic acids and derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "dicarboxylic acids and derivatives" RELATED [chebi] is_a: CHEBI:36586 ! carbonyl compound [Term] id: CHEBI:132153 name: hyaluronate def: "A carbohydrate acid derivative anion obtained by deprotonation of the carboxy groups of hyaluronic acid; major species at pH 7.3." [] -subset: 3_STAR -synonym: "hyaluronan" RELATED [UniProt] -synonym: "hyaluronate polyanion" RELATED [ChEBI] +subset: 3:STAR +synonym: "hyaluronan" RELATED [uniprot_ft] +synonym: "hyaluronate polyanion" RELATED [chebi] is_a: CHEBI:61469 ! polyanionic polymer is_a: CHEBI:63551 ! carbohydrate acid derivative anion -relationship: is_conjugate_base_of CHEBI:16336 ! hyaluronic acid +relationship: RO:0018033 CHEBI:16336 ! is deprotonated form of hyaluronic acid [Term] id: CHEBI:133294 name: oxo dicarboxylic acid dianion def: "A dicarboxylic acid dianion obtained by deprotonation of both carboxy groups of any oxo dicarboxylic acid." [] -subset: 3_STAR -synonym: "oxo dicarboxylic acid dianions" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxo dicarboxylic acid dianions" RELATED [chebi] is_a: CHEBI:28965 ! dicarboxylic acid dianion is_a: CHEBI:35903 ! oxo carboxylic acid anion -relationship: is_conjugate_base_of CHEBI:36145 ! oxo dicarboxylic acid +relationship: RO:0018033 CHEBI:36145 ! is deprotonated form of oxo dicarboxylic acid [Term] id: CHEBI:134179 name: volatile organic compound -def: "Any organic compound having an initial boiling point less than or equal to 250 degreeC (482 degreeF) measured at a standard atmospheric pressure of 101.3 kPa." [] -subset: 3_STAR -synonym: "VOC" RELATED [ChEBI] -synonym: "VOCs" RELATED [ChEBI] -synonym: "volatile organic compounds" RELATED [ChEBI] -xref: Wikipedia:Volatile_organic_compound +def: "Any organic compound having an initial boiling point less than or equal to 250 °C (482 °F) measured at a standard atmospheric pressure of 101.3 kPa." [] +subset: 3:STAR +synonym: "VOC" RELATED [chebi] +synonym: "VOCs" RELATED [chebi] +synonym: "volatile organic compounds" RELATED [chebi] +xref: wikipedia.en:Volatile_organic_compound {source="wikipedia.en"} is_a: CHEBI:72695 ! organic molecule [Term] id: CHEBI:136849 name: 3-oxo-Delta(4)-steroid group -def: "An organic group derived from any 3-oxo-Delta(4)-steroid." [] -subset: 3_STAR -synonym: "a 3-oxo-Delta4-steroid group" RELATED [UniProt] +def: "An organic group derived from any 3-oxo-Δ4-steroid." [] +subset: 3:STAR +synonym: "a 3-oxo-Delta4-steroid group" RELATED [uniprot_ft] is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:136889 name: 5beta steroid -def: "Any steroid that has beta-configuration at position 5." [] -subset: 3_STAR -synonym: "5beta steroids" RELATED [ChEBI] -synonym: "5beta-steroid" RELATED [ChEBI] -synonym: "5beta-steroids" RELATED [ChEBI] +def: "Any steroid that has β-configuration at position 5." [] +subset: 3:STAR +synonym: "5beta steroids" RELATED [chebi] +synonym: "5beta-steroid" RELATED [chebi] +synonym: "5beta-steroids" RELATED [chebi] is_a: CHEBI:35341 ! steroid [Term] id: CHEBI:138103 name: inorganic acid -def: "A Bronsted acid derived from one or more inorganic compounds. Inorganic acids (also known as mineral acids) form hydrons and conjugate base ions when dissolved in water." [] -subset: 3_STAR -synonym: "inorganic acids" RELATED [ChEBI] -synonym: "mineral acid" RELATED [ChEBI] -synonym: "mineral acids" RELATED [ChEBI] -xref: Wikipedia:Mineral_acid +def: "A Brønsted acid derived from one or more inorganic compounds. Inorganic acids (also known as mineral acids) form hydrons and conjugate base ions when dissolved in water." [] +subset: 3:STAR +synonym: "inorganic acids" RELATED [chebi] +synonym: "mineral acid" RELATED [chebi] +synonym: "mineral acids" RELATED [chebi] +xref: wikipedia.en:Mineral_acid {source="wikipedia.en"} is_a: CHEBI:39141 ! Bronsted acid [Term] id: CHEBI:138366 name: bile acids -def: "Any member of a group of hydroxy steroids occuring in bile, where they are present as the sodium salts of their amides with glycine or taurine. In mammals bile acids almost invariably have 5beta-configuration, while in lower vertebrates, some bile acids, known as allo-bile acids, have 5alpha-configuration." [] -subset: 3_STAR +def: "Any member of a group of hydroxy steroids occuring in bile, where they are present as the sodium salts of their amides with glycine or taurine. In mammals bile acids almost invariably have 5β-configuration, while in lower vertebrates, some bile acids, known as allo-bile acids, have 5α-configuration." [] +subset: 3:STAR is_a: CHEBI:25384 ! monocarboxylic acid is_a: CHEBI:35350 ! hydroxy steroid is_a: CHEBI:36078 ! cholanoid @@ -757,10 +763,11 @@ is_a: CHEBI:36078 ! cholanoid id: CHEBI:13850 name: apoprotein def: "An apoprotein is a protein devoid of its characteristic prosthetic group or metal." [] -subset: 3_STAR -synonym: "apoprotein" EXACT IUPAC_NAME [IUPAC] -synonym: "apoproteins" RELATED [ChEBI] -xref: KEGG:C16240 +subset: 3:STAR +synonym: "apoprotein" EXACT IUPAC:NAME [IUPAC] +synonym: "apoprotein" RELATED IUPAC:NAME [iupac] +synonym: "apoproteins" RELATED [chebi] +xref: kegg.compound:C16240 {source="kegg.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:38560 ! simple protein relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite @@ -768,102 +775,104 @@ relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite [Term] id: CHEBI:138675 name: gas molecular entity -def: "Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0degreeC and 100 kPa)." [] -subset: 3_STAR -synonym: "gas molecular entities" RELATED [ChEBI] -synonym: "gaseous molecular entities" RELATED [ChEBI] -synonym: "gaseous molecular entity" RELATED [ChEBI] -xref: Wikipedia:https\://en.wikipedia.org/wiki/Gas +def: "Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0°C and 100 kPa)." [] +subset: 3:STAR +synonym: "gas molecular entities" RELATED [chebi] +synonym: "gaseous molecular entities" RELATED [chebi] +synonym: "gaseous molecular entity" RELATED [chebi] +xref: wikipedia.en:https\://en.wikipedia.org/wiki/Gas {source="wikipedia.en"} is_a: CHEBI:33579 ! main group molecular entity [Term] id: CHEBI:139120 name: carotenoid beta-end derivative -def: "Any carotenoid derivative with an beta-end group" [] -subset: 2_STAR -synonym: "a carotenoid beta-end derivative" RELATED [UniProt] -xref: MetaCyc:Carotenoid-beta-end-group {source="SUBMITTER"} +def: "Any carotenoid derivative with an β-end group" [] +subset: 2:STAR +synonym: "a carotenoid beta-end derivative" RELATED [uniprot_ft] +xref: metacyc.compound:Carotenoid-beta-end-group {source="metacyc.compound"} is_a: CHEBI:23044 ! carotenoid [Term] id: CHEBI:13941 name: carbamate -subset: 3_STAR -synonym: "Carbamat" RELATED [ChEBI] -synonym: "carbamate" EXACT IUPAC_NAME [IUPAC, UniProt] -synonym: "carbamate ion" RELATED [ChemIDplus] -synonym: "carbamic acid, ion(1-)" RELATED [ChemIDplus] -synonym: "Karbamat" RELATED [ChEBI] -xref: Beilstein:3903503 {source="Beilstein"} -xref: CAS:302-11-4 {source="ChemIDplus"} -xref: Gmelin:239604 {source="Gmelin"} +subset: 3:STAR +synonym: "Carbamat" RELATED [chebi] +synonym: "carbamate" EXACT IUPAC:NAME [IUPAC] +synonym: "carbamate" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "carbamate ion" RELATED [chemidplus] +synonym: "carbamic acid, ion(1-)" RELATED [chemidplus] +synonym: "Karbamat" RELATED [chebi] +xref: beilstein:3903503 {source="beilstein"} +xref: cas:302-11-4 {source="cas"} +xref: gmelin:239604 {source="gmelin"} is_a: CHEBI:37022 ! amino-acid anion -relationship: is_conjugate_base_of CHEBI:28616 ! carbamic acid +relationship: RO:0018033 CHEBI:28616 ! is deprotonated form of carbamic acid [Term] id: CHEBI:139588 name: alpha-hydroxy ketone -def: "A ketone containing a hydroxy group on the alpha-carbon relative to the C=O group." [] -subset: 3_STAR -synonym: "alpha-hydroxy ketones" RELATED [ChEBI] -synonym: "alpha-hydroxy-ketone" RELATED [ChEBI] -synonym: "alpha-hydroxy-ketones" RELATED [ChEBI] -synonym: "alpha-hydroxyketone" RELATED [ChEBI] -synonym: "alpha-hydroxyketones" RELATED [ChEBI] -xref: PMID:15326516 {source="Europe PMC"} -xref: PMID:19908854 {source="Europe PMC"} -xref: PMID:20382022 {source="Europe PMC"} -xref: PMID:23295224 {source="Europe PMC"} +def: "A ketone containing a hydroxy group on the α-carbon relative to the C=O group." [] +subset: 3:STAR +synonym: "alpha-hydroxy ketones" RELATED [chebi] +synonym: "alpha-hydroxy-ketone" RELATED [chebi] +synonym: "alpha-hydroxy-ketones" RELATED [chebi] +synonym: "alpha-hydroxyketone" RELATED [chebi] +synonym: "alpha-hydroxyketones" RELATED [chebi] +xref: pubmed:15326516 {source="pubmed"} +xref: pubmed:19908854 {source="pubmed"} +xref: pubmed:20382022 {source="pubmed"} +xref: pubmed:23295224 {source="pubmed"} is_a: CHEBI:17087 ! ketone is_a: CHEBI:33822 ! organic hydroxy compound [Term] id: CHEBI:139590 name: primary alpha-hydroxy ketone -def: "An alpha-hydroxy ketone in which the carbonyl group and the hydroxy group are linked by a -CH2 (methylene) group." [] -subset: 3_STAR -synonym: "primary alpha-hydroxy ketones" RELATED [ChEBI] -synonym: "primary alpha-hydroxy-ketone" RELATED [ChEBI] -synonym: "primary alpha-hydroxy-ketones" RELATED [ChEBI] -synonym: "primary alpha-hydroxyketone" RELATED [ChEBI] -synonym: "primary alpha-hydroxyketones" RELATED [ChEBI] +def: "An α-hydroxy ketone in which the carbonyl group and the hydroxy group are linked by a -CH2 (methylene) group." [] +subset: 3:STAR +synonym: "primary alpha-hydroxy ketones" RELATED [chebi] +synonym: "primary alpha-hydroxy-ketone" RELATED [chebi] +synonym: "primary alpha-hydroxy-ketones" RELATED [chebi] +synonym: "primary alpha-hydroxyketone" RELATED [chebi] +synonym: "primary alpha-hydroxyketones" RELATED [chebi] is_a: CHEBI:139588 ! alpha-hydroxy ketone is_a: CHEBI:15734 ! primary alcohol [Term] id: CHEBI:140325 name: secondary carboxamide -def: "A carboxamide resulting from the formal condensation of a carboxylic acid with a primary amine; formula RC(=O)NHR(1)." [] -subset: 3_STAR -synonym: "secondary carboxamides" RELATED [ChEBI] +def: "A carboxamide resulting from the formal condensation of a carboxylic acid with a primary amine; formula RC(=O)NHR1." [] +subset: 3:STAR +synonym: "secondary carboxamides" RELATED [chebi] is_a: CHEBI:37622 ! carboxamide [Term] id: CHEBI:140601 name: fatty acid 4:0 def: "Any saturated fatty acid containing 4 carbons." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:26666 ! short-chain fatty acid -relationship: is_conjugate_acid_of CHEBI:78115 ! fatty acid anion 4:0 +relationship: RO:0018034 CHEBI:78115 ! is protonated form of fatty acid anion 4:0 [Term] id: CHEBI:141668 name: L-tyrosinal(1+) -def: "A primary ammonium ion resulting from the protonation of the amino group of L-tyrosinal." [] -subset: 3_STAR -synonym: "(2S)-1-(4-hydroxyphenyl)-3-oxopropan-2-aminium" EXACT IUPAC_NAME [IUPAC] -synonym: "(2S)-1-(p-hydroxyphenyl)-3-oxopropan-2-aminium" RELATED [ChEBI] -synonym: "L-tyrosinal" RELATED [UniProt] -xref: MetaCyc:CPD-21526 -xref: PMID:23281040 {source="SUBMITTER"} +def: "A primary ammonium ion resulting from the protonation of the amino group of L-tyrosinal." [] +subset: 3:STAR +synonym: "(2S)-1-(4-hydroxyphenyl)-3-oxopropan-2-aminium" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-1-(4-hydroxyphenyl)-3-oxopropan-2-aminium" RELATED IUPAC:NAME [iupac] +synonym: "(2S)-1-(p-hydroxyphenyl)-3-oxopropan-2-aminium" RELATED [chebi] +synonym: "L-tyrosinal" RELATED [uniprot_ft] +xref: metacyc.compound:CPD-21526 {source="metacyc.compound"} +xref: pubmed:23281040 {source="pubmed"} is_a: CHEBI:65296 ! primary ammonium ion -relationship: is_conjugate_acid_of CHEBI:46209 ! L-tyrosinal +relationship: RO:0018034 CHEBI:46209 ! is protonated form of L-tyrosinal [Term] id: CHEBI:142163 name: 24G7 epitope -def: "An antigenic epitope recognized by an anti-bilirubin monoclonal antibody designated 24G7. A substructure of bilirubin IXalpha, it is the region containing the oxo group at C-1, the methyl group at C-2, C-(4, 5, 6, 9), and N-21 and -22." [] -subset: 3_STAR +def: "An antigenic epitope recognized by an anti-bilirubin monoclonal antibody designated 24G7. A substructure of bilirubin IXα, it is the region containing the oxo group at C-1, the methyl group at C-2, C-(4, 5, 6, 9), and N-21 and -22." [] +subset: 3:STAR is_a: BFO:0000004 ! independent continuant is_a: CHEBI:24433 ! group relationship: RO:0000087 CHEBI:53000 ! has role epitope @@ -871,29 +880,30 @@ relationship: RO:0000087 CHEBI:53000 ! has role epitope [Term] id: CHEBI:142355 name: purines D-ribonucleoside -def: "A purine ribonucleoside that is a purine derivative attached to a beta-D-ribofuranosyl residue at position 9 via a glycosidic (N-glycosyl) linkage." [] -subset: 3_STAR -synonym: "a purine D-ribonucleoside" RELATED [UniProt] +def: "A purine ribonucleoside that is a purine derivative attached to a β-D-ribofuranosyl residue at position 9 via a glycosidic (N-glycosyl) linkage." [] +subset: 3:STAR +synonym: "a purine D-ribonucleoside" RELATED [uniprot_ft] is_a: CHEBI:26399 ! purine ribonucleoside -relationship: has_functional_parent CHEBI:26386 ! purine nucleobase -relationship: has_functional_parent CHEBI:47013 ! D-ribofuranose +relationship: RO:0018038 CHEBI:26386 ! has functional parent purine nucleobase +relationship: RO:0018038 CHEBI:47013 ! has functional parent D-ribofuranose [Term] id: CHEBI:14321 name: glutamate(1-) -def: "An alpha-amino-acid anion that is the conjugate base of glutamic acid, having anionic carboxy groups and a cationic amino group" [] -subset: 3_STAR -synonym: "2-ammoniopentanedioate" RELATED [IUPAC] -synonym: "glutamate" RELATED [UniProt] -synonym: "glutamate(1-)" EXACT [JCBN] -synonym: "glutamic acid monoanion" RELATED [JCBN] -synonym: "hydrogen glutamate" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:327908 {source="Gmelin"} +def: "An α-amino-acid anion that is the conjugate base of glutamic acid, having anionic carboxy groups and a cationic amino group" [] +subset: 3:STAR +synonym: "2-ammoniopentanedioate" RELATED [iupac] +synonym: "glutamate" RELATED [uniprot_ft] +synonym: "glutamate(1-)" RELATED [jcbn] +synonym: "glutamic acid monoanion" RELATED [jcbn] +synonym: "hydrogen glutamate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen glutamate" RELATED IUPAC:NAME [iupac] +xref: gmelin:327908 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33558 ! alpha-amino-acid anion -relationship: is_conjugate_acid_of CHEBI:29987 ! glutamate(2-) -relationship: is_conjugate_base_of CHEBI:18237 ! glutamic acid relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:18237 ! is deprotonated form of glutamic acid +relationship: RO:0018034 CHEBI:29987 ! is protonated form of glutamate(2-) [Term] id: CHEBI:15339 @@ -901,15 +911,15 @@ name: acceptor alt_id: CHEBI:13699 alt_id: CHEBI:2377 def: "A molecular entity that can accept an electron, a pair of electrons, an atom or a group from another molecular entity." [] -subset: 3_STAR -synonym: "A" RELATED [KEGG_COMPOUND] -synonym: "accepteur" RELATED [ChEBI] -synonym: "Acceptor" EXACT [KEGG_COMPOUND] -synonym: "Akzeptor" RELATED [ChEBI] -synonym: "Hydrogen-acceptor" RELATED [KEGG_COMPOUND] -synonym: "Oxidized donor" RELATED [KEGG_COMPOUND] -xref: KEGG:C00028 -xref: KEGG:C16722 +subset: 3:STAR +synonym: "A" RELATED [kegg.compound] +synonym: "accepteur" RELATED [chebi] +synonym: "Acceptor" RELATED [kegg.compound] +synonym: "Akzeptor" RELATED [chebi] +synonym: "Hydrogen-acceptor" RELATED [kegg.compound] +synonym: "Oxidized donor" RELATED [kegg.compound] +xref: kegg.compound:C00028 {source="kegg.compound"} +xref: kegg.compound:C16722 {source="kegg.compound"} is_a: CHEBI:51086 ! chemical role [Term] @@ -920,53 +930,54 @@ alt_id: CHEBI:23212 alt_id: CHEBI:3665 alt_id: CHEBI:41524 def: "A choline that is the parent compound of the cholines class, consisting of ethanolamine having three methyl substituents attached to the amino function." [] -subset: 3_STAR -synonym: "2-hydroxy-N,N,N-trimethylethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "Bilineurine" RELATED [KEGG_COMPOUND] -synonym: "Choline" EXACT [KEGG_COMPOUND] -synonym: "choline" EXACT [UniProt] -synonym: "CHOLINE ION" RELATED [PDBeChem] -synonym: "N,N,N-trimethylethanol-ammonium" RELATED [ChEBI] -synonym: "N-trimethylethanolamine" RELATED [ChEBI] -synonym: "trimethylethanolamine" RELATED [ChEBI] -xref: CAS:62-49-7 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:3097 {source="DrugCentral"} -xref: DrugBank:DB00122 -xref: ECMDB:ECMDB00097 -xref: Gmelin:324597 {source="Gmelin"} -xref: HMDB:HMDB0000097 -xref: KEGG:C00114 -xref: KEGG:D07690 -xref: KNApSAcK:C00007298 -xref: MetaCyc:CHOLINE -xref: PDBeChem:CHT -xref: PMID:10930630 {source="Europe PMC"} -xref: PMID:12826235 {source="Europe PMC"} -xref: PMID:12946691 {source="Europe PMC"} -xref: PMID:14972364 {source="Europe PMC"} -xref: PMID:16210714 {source="Europe PMC"} -xref: PMID:17087106 {source="Europe PMC"} -xref: PMID:17283071 {source="Europe PMC"} -xref: PMID:17344490 {source="Europe PMC"} -xref: PMID:18204095 {source="Europe PMC"} -xref: PMID:18230680 {source="Europe PMC"} -xref: PMID:18786517 {source="Europe PMC"} -xref: PMID:18786520 {source="Europe PMC"} -xref: PMID:19246089 {source="Europe PMC"} -xref: PMID:20038853 {source="Europe PMC"} -xref: PMID:20446114 {source="Europe PMC"} -xref: PMID:22770225 {source="Europe PMC"} -xref: PMID:22961562 {source="Europe PMC"} -xref: PMID:23095202 {source="Europe PMC"} -xref: PMID:23616508 {source="Europe PMC"} -xref: PMID:23637565 {source="Europe PMC"} -xref: PMID:23733158 {source="Europe PMC"} -xref: PMID:6420466 {source="Europe PMC"} -xref: PMID:7590654 {source="Europe PMC"} -xref: PMID:9517478 {source="Europe PMC"} -xref: Reaxys:1736748 {source="Reaxys"} -xref: Wikipedia:Choline -xref: YMDB:YMDB00227 +subset: 3:STAR +synonym: "2-hydroxy-N,N,N-trimethylethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-hydroxy-N,N,N-trimethylethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "Bilineurine" RELATED [kegg.compound] +synonym: "Choline" RELATED [kegg.compound] +synonym: "choline" RELATED [uniprot_ft] +synonym: "CHOLINE ION" RELATED [pdb-ccd] +synonym: "N,N,N-trimethylethanol-ammonium" RELATED [chebi] +synonym: "N-trimethylethanolamine" RELATED [chebi] +synonym: "trimethylethanolamine" RELATED [chebi] +xref: cas:62-49-7 {source="cas"} +xref: drugbank:DB00122 {source="drugbank"} +xref: drugcentral:3097 {source="drugcentral"} +xref: ecmdb:ECMDB00097 {source="ecmdb"} +xref: gmelin:324597 {source="gmelin"} +xref: hmdb:HMDB0000097 {source="hmdb"} +xref: kegg.compound:C00114 {source="kegg.compound"} +xref: kegg.drug:D07690 {source="kegg.drug"} +xref: knapsack:C00007298 {source="knapsack"} +xref: metacyc.compound:CHOLINE {source="metacyc.compound"} +xref: pdb-ccd:CHT {source="pdb-ccd"} +xref: pubmed:10930630 {source="pubmed"} +xref: pubmed:12826235 {source="pubmed"} +xref: pubmed:12946691 {source="pubmed"} +xref: pubmed:14972364 {source="pubmed"} +xref: pubmed:16210714 {source="pubmed"} +xref: pubmed:17087106 {source="pubmed"} +xref: pubmed:17283071 {source="pubmed"} +xref: pubmed:17344490 {source="pubmed"} +xref: pubmed:18204095 {source="pubmed"} +xref: pubmed:18230680 {source="pubmed"} +xref: pubmed:18786517 {source="pubmed"} +xref: pubmed:18786520 {source="pubmed"} +xref: pubmed:19246089 {source="pubmed"} +xref: pubmed:20038853 {source="pubmed"} +xref: pubmed:20446114 {source="pubmed"} +xref: pubmed:22770225 {source="pubmed"} +xref: pubmed:22961562 {source="pubmed"} +xref: pubmed:23095202 {source="pubmed"} +xref: pubmed:23616508 {source="pubmed"} +xref: pubmed:23637565 {source="pubmed"} +xref: pubmed:23733158 {source="pubmed"} +xref: pubmed:6420466 {source="pubmed"} +xref: pubmed:7590654 {source="pubmed"} +xref: pubmed:9517478 {source="pubmed"} +xref: reaxys:1736748 {source="reaxys"} +xref: wikipedia.en:Choline {source="wikipedia.en"} +xref: ymdb:YMDB00227 {source="ymdb"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:23217 ! cholines relationship: RO:0000087 CHEBI:25512 ! has role neurotransmitter @@ -988,36 +999,37 @@ alt_id: CHEBI:22197 alt_id: CHEBI:2416 alt_id: CHEBI:40559 def: "Actylcholine is an ester of acetic acid and choline, which acts as a neurotransmitter." [] -subset: 3_STAR -synonym: "2-acetyloxy-N,N,N-trimethylethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "ACETYLCHOLINE" EXACT [PDBeChem] -synonym: "Acetylcholine" EXACT [KEGG_COMPOUND] -synonym: "acetylcholine" EXACT [UniProt] -synonym: "ACh" RELATED [ChemIDplus] -synonym: "Azetylcholin" RELATED [ChEBI] -synonym: "choline acetate" RELATED [ChemIDplus] -synonym: "O-Acetylcholine" RELATED [KEGG_COMPOUND] -xref: Beilstein:1764436 {source="ChemIDplus"} -xref: CAS:51-84-3 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:65 {source="DrugCentral"} -xref: DrugBank:DB03128 -xref: Gmelin:326108 {source="Gmelin"} -xref: KEGG:C01996 -xref: LINCS:LSM-5888 -xref: PDBeChem:ACH -xref: PMID:14764638 {source="Europe PMC"} -xref: PMID:15014918 {source="Europe PMC"} -xref: PMID:15231705 {source="Europe PMC"} -xref: PMID:15361288 {source="Europe PMC"} -xref: PMID:18050502 {source="Europe PMC"} -xref: PMID:18407448 {source="Europe PMC"} -xref: PMID:19255787 {source="Europe PMC"} -xref: PMID:20963497 {source="Europe PMC"} -xref: PMID:21130809 {source="Europe PMC"} -xref: PMID:21246223 {source="Europe PMC"} -xref: PMID:21545631 {source="Europe PMC"} -xref: PMID:21601579 {source="Europe PMC"} -xref: Wikipedia:Acetylcholine +subset: 3:STAR +synonym: "2-acetyloxy-N,N,N-trimethylethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-acetyloxy-N,N,N-trimethylethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "ACETYLCHOLINE" RELATED [pdb-ccd] +synonym: "Acetylcholine" RELATED [kegg.compound] +synonym: "acetylcholine" RELATED [uniprot_ft] +synonym: "ACh" RELATED [chemidplus] +synonym: "Azetylcholin" RELATED [chebi] +synonym: "choline acetate" RELATED [chemidplus] +synonym: "O-Acetylcholine" RELATED [kegg.compound] +xref: beilstein:1764436 {source="beilstein"} +xref: cas:51-84-3 {source="cas"} +xref: drugbank:DB03128 {source="drugbank"} +xref: drugcentral:65 {source="drugcentral"} +xref: gmelin:326108 {source="gmelin"} +xref: kegg.compound:C01996 {source="kegg.compound"} +xref: lincs.smallmolecule:LSM-5888 {source="lincs.smallmolecule"} +xref: pdb-ccd:ACH {source="pdb-ccd"} +xref: pubmed:14764638 {source="pubmed"} +xref: pubmed:15014918 {source="pubmed"} +xref: pubmed:15231705 {source="pubmed"} +xref: pubmed:15361288 {source="pubmed"} +xref: pubmed:18050502 {source="pubmed"} +xref: pubmed:18407448 {source="pubmed"} +xref: pubmed:19255787 {source="pubmed"} +xref: pubmed:20963497 {source="pubmed"} +xref: pubmed:21130809 {source="pubmed"} +xref: pubmed:21246223 {source="pubmed"} +xref: pubmed:21545631 {source="pubmed"} +xref: pubmed:21601579 {source="pubmed"} +xref: wikipedia.en:Acetylcholine {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35287 ! acylcholine is_a: CHEBI:47622 ! acetate ester @@ -1035,55 +1047,58 @@ alt_id: CHEBI:22169 alt_id: CHEBI:2387 alt_id: CHEBI:40486 def: "A simple monocarboxylic acid containing two carbons." [] -subset: 3_STAR +subset: 3:STAR synonym: "ACETIC ACID" EXACT [PDBeChem] +synonym: "ACETIC ACID" RELATED [pdb-ccd] synonym: "Acetic acid" EXACT [KEGG_COMPOUND] -synonym: "acetic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "acide acetique" RELATED [ChemIDplus] -synonym: "AcOH" RELATED [ChEBI] -synonym: "CH3-COOH" RELATED [IUPAC] -synonym: "CH3CO2H" RELATED [ChEBI] -synonym: "E 260" RELATED [ChEBI] -synonym: "E-260" RELATED [ChEBI] -synonym: "E260" RELATED [ChEBI] -synonym: "Essigsaeure" RELATED [ChEBI] -synonym: "Ethanoic acid" RELATED [KEGG_COMPOUND] -synonym: "ethoic acid" RELATED [ChEBI] -synonym: "Ethylic acid" RELATED [ChemIDplus] -synonym: "HOAc" RELATED [ChEBI] -synonym: "INS No. 260" RELATED [ChEBI] -synonym: "MeCO2H" RELATED [ChEBI] -synonym: "MeCOOH" RELATED [ChEBI] -synonym: "Methanecarboxylic acid" RELATED [ChemIDplus] -xref: CAS:64-19-7 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:4211 {source="DrugCentral"} -xref: Gmelin:1380 {source="Gmelin"} -xref: HMDB:HMDB0000042 -xref: KEGG:C00033 -xref: KEGG:D00010 -xref: KNApSAcK:C00001176 -xref: LIPID_MAPS_instance:LMFA01010002 {source="LIPID MAPS"} -xref: MetaCyc:ACET -xref: PDBeChem:ACT -xref: PDBeChem:ACY -xref: PMID:12005138 {source="Europe PMC"} -xref: PMID:15107950 {source="Europe PMC"} -xref: PMID:16630552 {source="Europe PMC"} -xref: PMID:16774200 {source="Europe PMC"} -xref: PMID:17190852 {source="Europe PMC"} -xref: PMID:19416101 {source="Europe PMC"} -xref: PMID:19469536 {source="Europe PMC"} -xref: PMID:22153255 {source="Europe PMC"} -xref: PMID:22173419 {source="Europe PMC"} -xref: PPDB:1333 -xref: Reaxys:506007 {source="Reaxys"} -xref: Wikipedia:Acetic_acid +synonym: "Acetic acid" RELATED [kegg.compound] +synonym: "acetic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "acetic acid" RELATED IUPAC:NAME [iupac] +synonym: "acide acetique" RELATED [chemidplus] +synonym: "AcOH" RELATED [chebi] +synonym: "CH3-COOH" RELATED [iupac] +synonym: "CH3CO2H" RELATED [chebi] +synonym: "E 260" RELATED [chebi] +synonym: "E-260" RELATED [chebi] +synonym: "E260" RELATED [chebi] +synonym: "Essigsaeure" RELATED [chebi] +synonym: "Ethanoic acid" RELATED [kegg.compound] +synonym: "ethoic acid" RELATED [chebi] +synonym: "Ethylic acid" RELATED [chemidplus] +synonym: "HOAc" RELATED [chebi] +synonym: "INS No. 260" RELATED [chebi] +synonym: "MeCO2H" RELATED [chebi] +synonym: "MeCOOH" RELATED [chebi] +synonym: "Methanecarboxylic acid" RELATED [chemidplus] +xref: cas:64-19-7 {source="cas"} +xref: drugcentral:4211 {source="drugcentral"} +xref: gmelin:1380 {source="gmelin"} +xref: hmdb:HMDB0000042 {source="hmdb"} +xref: kegg.compound:C00033 {source="kegg.compound"} +xref: kegg.drug:D00010 {source="kegg.drug"} +xref: knapsack:C00001176 {source="knapsack"} +xref: lipidmaps:LMFA01010002 {source="lipidmaps"} +xref: metacyc.compound:ACET {source="metacyc.compound"} +xref: pdb-ccd:ACT {source="pdb-ccd"} +xref: pdb-ccd:ACY {source="pdb-ccd"} +xref: ppdb:1333 {source="ppdb"} +xref: pubmed:12005138 {source="pubmed"} +xref: pubmed:15107950 {source="pubmed"} +xref: pubmed:16630552 {source="pubmed"} +xref: pubmed:16774200 {source="pubmed"} +xref: pubmed:17190852 {source="pubmed"} +xref: pubmed:19416101 {source="pubmed"} +xref: pubmed:19469536 {source="pubmed"} +xref: pubmed:22153255 {source="pubmed"} +xref: pubmed:22173419 {source="pubmed"} +xref: reaxys:506007 {source="reaxys"} +xref: wikipedia.en:Acetic_acid {source="wikipedia.en"} is_a: CHEBI:25384 ! monocarboxylic acid -relationship: is_conjugate_acid_of CHEBI:30089 ! acetate relationship: RO:0000087 CHEBI:48356 ! has role protic solvent relationship: RO:0000087 CHEBI:64049 ! has role food acidity regulator relationship: RO:0000087 CHEBI:65256 ! has role antimicrobial food preservative relationship: RO:0000087 CHEBI:83056 ! has role Daphnia magna metabolite +relationship: RO:0018034 CHEBI:30089 ! is protonated form of acetate [Term] id: CHEBI:15377 @@ -1099,45 +1114,50 @@ alt_id: CHEBI:44701 alt_id: CHEBI:44819 alt_id: CHEBI:5585 def: "An oxygen hydride consisting of an oxygen atom that is covalently bonded to two hydrogen atoms" [] -subset: 3_STAR -synonym: "[OH2]" RELATED [IUPAC] -synonym: "acqua" RELATED [ChEBI] -synonym: "agua" RELATED [ChEBI] -synonym: "aqua" RELATED [ChEBI] -synonym: "BOUND WATER" RELATED [PDBeChem] -synonym: "dihydridooxygen" RELATED [IUPAC] -synonym: "dihydrogen oxide" RELATED [IUPAC] -synonym: "eau" RELATED [ChEBI] -synonym: "H2O" RELATED [KEGG_COMPOUND, UniProt] -synonym: "HOH" RELATED [ChEBI] -synonym: "hydrogen hydroxide" RELATED [ChEBI] -synonym: "oxidane" EXACT IUPAC_NAME [IUPAC] -synonym: "Wasser" RELATED [ChEBI] +subset: 3:STAR +synonym: "[OH2]" RELATED [iupac] +synonym: "acqua" RELATED [chebi] +synonym: "agua" RELATED [chebi] +synonym: "aqua" RELATED [chebi] +synonym: "BOUND WATER" RELATED [pdb-ccd] +synonym: "dihydridooxygen" RELATED [iupac] +synonym: "dihydrogen oxide" RELATED [iupac] +synonym: "eau" RELATED [chebi] +synonym: "H(2)O" RELATED [uniprot_ft] +synonym: "H2O" RELATED [kegg.compound] +synonym: "HOH" RELATED [chebi] +synonym: "hydrogen hydroxide" RELATED [chebi] +synonym: "oxidane" EXACT IUPAC:NAME [IUPAC] +synonym: "oxidane" RELATED IUPAC:NAME [iupac] +synonym: "Wasser" RELATED [chebi] synonym: "WATER" EXACT [PDBeChem] +synonym: "WATER" RELATED [pdb-ccd] synonym: "Water" EXACT [KEGG_COMPOUND] -synonym: "water" EXACT IUPAC_NAME [IUPAC] -xref: CAS:7732-18-5 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Gmelin:117 {source="Gmelin"} -xref: HMDB:HMDB0002111 -xref: KEGG:C00001 -xref: KEGG:D00001 -xref: MetaCyc:WATER -xref: MolBase:1 -xref: PDBeChem:HOH -xref: Reaxys:3587155 {source="Reaxys"} -xref: Wikipedia:Water +synonym: "Water" RELATED [kegg.compound] +synonym: "water" EXACT IUPAC:NAME [IUPAC] +synonym: "water" RELATED IUPAC:NAME [iupac] +xref: cas:7732-18-5 {source="cas"} +xref: gmelin:117 {source="gmelin"} +xref: hmdb:HMDB0002111 {source="hmdb"} +xref: kegg.compound:C00001 {source="kegg.compound"} +xref: kegg.drug:D00001 {source="kegg.drug"} +xref: metacyc.compound:WATER {source="metacyc.compound"} +xref: molbase:1 {source="molbase"} +xref: pdb-ccd:HOH {source="pdb-ccd"} +xref: reaxys:3587155 {source="reaxys"} +xref: wikipedia.en:Water {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33693 ! oxygen hydride is_a: CHEBI:37176 ! mononuclear parent hydride is_a: CHEBI:52625 ! inorganic hydroxy compound -relationship: is_conjugate_acid_of CHEBI:16234 ! hydroxide -relationship: is_conjugate_base_of CHEBI:29412 ! oxonium relationship: RO:0000087 CHEBI:48360 ! has role amphiprotic solvent relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:76413 ! has role greenhouse gas relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:29412 ! is deprotonated form of oxonium +relationship: RO:0018034 CHEBI:16234 ! is protonated form of hydroxide [Term] id: CHEBI:15378 @@ -1146,13 +1166,15 @@ alt_id: CHEBI:10744 alt_id: CHEBI:13357 alt_id: CHEBI:5584 def: "The general name for the hydrogen nucleus, to be used without regard to the hydrogen nuclear mass (either for hydrogen in its natural abundance or where it is not desired to distinguish between the isotopes)." [] -subset: 3_STAR -synonym: "H(+)" RELATED [UniProt] -synonym: "H+" RELATED [KEGG_COMPOUND] -synonym: "hydrogen(1+)" EXACT IUPAC_NAME [IUPAC] -synonym: "Hydron" EXACT [KEGG_COMPOUND] -synonym: "hydron" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C00080 +subset: 3:STAR +synonym: "H(+)" RELATED [uniprot_ft] +synonym: "H+" RELATED [kegg.compound] +synonym: "hydrogen(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen(1+)" RELATED IUPAC:NAME [iupac] +synonym: "Hydron" RELATED [kegg.compound] +synonym: "hydron" EXACT IUPAC:NAME [IUPAC] +synonym: "hydron" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C00080 {source="kegg.compound"} is_a: CHEBI:25414 ! monoatomic monocation is_a: CHEBI:33251 ! monoatomic hydrogen is_a: CHEBI:33252 ! atomic nucleus @@ -1165,42 +1187,45 @@ alt_id: CHEBI:10745 alt_id: CHEBI:13416 alt_id: CHEBI:23833 alt_id: CHEBI:25366 +alt_id: CHEBI:29097 alt_id: CHEBI:30491 alt_id: CHEBI:44742 alt_id: CHEBI:7860 -subset: 3_STAR -synonym: "[OO]" RELATED [MolBase] -synonym: "dioxygen" EXACT IUPAC_NAME [IUPAC] -synonym: "dioxygene" RELATED [ChEBI] -synonym: "Disauerstoff" RELATED [ChEBI] -synonym: "E 948" RELATED [ChEBI] -synonym: "E-948" RELATED [ChEBI] -synonym: "E948" RELATED [ChEBI] -synonym: "molecular oxygen" RELATED [ChEBI] -synonym: "O2" RELATED [IUPAC, KEGG_COMPOUND, UniProt] -synonym: "Oxygen" RELATED [KEGG_COMPOUND] -synonym: "OXYGEN MOLECULE" RELATED [PDBeChem] -xref: CAS:7782-44-7 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Gmelin:485 {source="Gmelin"} -xref: HMDB:HMDB0001377 -xref: KEGG:C00007 -xref: KEGG:D00003 -xref: MetaCyc:OXYGEN-MOLECULE -xref: MolBase:750 -xref: PDBeChem:OXY -xref: PMID:10906528 {source="Europe PMC"} -xref: PMID:16977326 {source="Europe PMC"} -xref: PMID:18210929 {source="Europe PMC"} -xref: PMID:18638417 {source="Europe PMC"} -xref: PMID:19840863 {source="Europe PMC"} -xref: PMID:7710549 {source="Europe PMC"} -xref: PMID:9463773 {source="Europe PMC"} -xref: Wikipedia:Oxygen +subset: 3:STAR +synonym: "[OO]" RELATED [molbase] +synonym: "dioxygen" EXACT IUPAC:NAME [IUPAC] +synonym: "dioxygen" RELATED IUPAC:NAME [iupac] +synonym: "dioxygene" RELATED [chebi] +synonym: "Disauerstoff" RELATED [chebi] +synonym: "E 948" RELATED [chebi] +synonym: "E-948" RELATED [chebi] +synonym: "E948" RELATED [chebi] +synonym: "molecular oxygen" RELATED [chebi] +synonym: "O(2)" RELATED [uniprot_ft] +synonym: "O2" RELATED [iupac, kegg.compound] +synonym: "Oxygen" EXACT [KEGG_COMPOUND] +synonym: "Oxygen" RELATED [kegg.compound] +synonym: "OXYGEN MOLECULE" RELATED [pdb-ccd] +xref: cas:7782-44-7 {source="cas"} +xref: gmelin:485 {source="gmelin"} +xref: hmdb:HMDB0001377 {source="hmdb"} +xref: kegg.compound:C00007 {source="kegg.compound"} +xref: kegg.drug:D00003 {source="kegg.drug"} +xref: metacyc.compound:OXYGEN-MOLECULE {source="metacyc.compound"} +xref: molbase:750 {source="molbase"} +xref: pdb-ccd:OXY {source="pdb-ccd"} +xref: pubmed:10906528 {source="pubmed"} +xref: pubmed:16977326 {source="pubmed"} +xref: pubmed:18210929 {source="pubmed"} +xref: pubmed:18638417 {source="pubmed"} +xref: pubmed:19840863 {source="pubmed"} +xref: pubmed:7710549 {source="pubmed"} +xref: pubmed:9463773 {source="pubmed"} +xref: wikipedia.en:Oxygen {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:138675 ! gas molecular entity is_a: CHEBI:25362 ! elemental molecule is_a: CHEBI:33263 ! diatomic oxygen -relationship: is_conjugate_base_of CHEBI:29793 ! hydridodioxygen(1+) relationship: RO:0000087 CHEBI:27027 ! has role micronutrient relationship: RO:0000087 CHEBI:33284 ! has role nutrient relationship: RO:0000087 CHEBI:33893 ! has role reagent @@ -1209,6 +1234,7 @@ relationship: RO:0000087 CHEBI:63248 ! has role oxidising agent relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:77974 ! has role food packaging gas +relationship: RO:0018033 CHEBI:29793 ! is deprotonated form of hydridodioxygen(1+) [Term] id: CHEBI:15422 @@ -1220,32 +1246,33 @@ alt_id: CHEBI:22249 alt_id: CHEBI:2359 alt_id: CHEBI:40938 def: "An adenosine 5'-phosphate in which the 5'-phosphate is a triphosphate group. It is involved in the transportation of chemical energy during metabolic pathways." [] -subset: 3_STAR -synonym: "adenosine 5'-(tetrahydrogen triphosphate)" EXACT IUPAC_NAME [IUPAC] -synonym: "Adenosine 5'-triphosphate" RELATED [KEGG_COMPOUND] -synonym: "Adenosine triphosphate" RELATED [ChemIDplus] -synonym: "ADENOSINE-5'-TRIPHOSPHATE" RELATED [PDBeChem] -synonym: "ATP" EXACT [KEGG_COMPOUND] -synonym: "H4atp" RELATED [IUPAC] -xref: CAS:56-65-5 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:91 {source="DrugCentral"} -xref: DrugBank:DB00171 -xref: Gmelin:34857 {source="Gmelin"} -xref: HMDB:HMDB0000538 -xref: KEGG:C00002 -xref: KEGG:D08646 -xref: KNApSAcK:C00001491 -xref: Patent:US3079379 -xref: PDBeChem:ATP -xref: Reaxys:73010 {source="Reaxys"} -xref: Wikipedia:Adenosine_triphosphate +subset: 3:STAR +synonym: "adenosine 5'-(tetrahydrogen triphosphate)" EXACT IUPAC:NAME [IUPAC] +synonym: "adenosine 5'-(tetrahydrogen triphosphate)" RELATED IUPAC:NAME [iupac] +synonym: "Adenosine 5'-triphosphate" RELATED [kegg.compound] +synonym: "Adenosine triphosphate" RELATED [chemidplus] +synonym: "ADENOSINE-5'-TRIPHOSPHATE" RELATED [pdb-ccd] +synonym: "ATP" RELATED [kegg.compound] +synonym: "H4atp" RELATED [iupac] +xref: cas:56-65-5 {source="cas"} +xref: drugbank:DB00171 {source="drugbank"} +xref: drugcentral:91 {source="drugcentral"} +xref: gmelin:34857 {source="gmelin"} +xref: hmdb:HMDB0000538 {source="hmdb"} +xref: kegg.compound:C00002 {source="kegg.compound"} +xref: kegg.drug:D08646 {source="kegg.drug"} +xref: knapsack:C00001491 {source="knapsack"} +xref: patent:US3079379 {source="patent"} +xref: pdb-ccd:ATP {source="pdb-ccd"} +xref: reaxys:73010 {source="reaxys"} +xref: wikipedia.en:Adenosine_triphosphate {source="wikipedia.en"} is_a: CHEBI:37045 ! purine ribonucleoside 5'-triphosphate is_a: CHEBI:37096 ! adenosine 5'-phosphate -relationship: is_conjugate_acid_of CHEBI:57299 ! ATP(3-) relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:27027 ! has role micronutrient relationship: RO:0000087 CHEBI:50733 ! has role nutraceutical relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018034 CHEBI:57299 ! is protonated form of ATP(3-) [Term] id: CHEBI:15440 @@ -1255,29 +1282,30 @@ alt_id: CHEBI:10843 alt_id: CHEBI:15104 alt_id: CHEBI:26746 alt_id: CHEBI:9245 -def: "A triterpene consisting of 2,6,10,15,19,23-hexamethyltetracosane having six double bonds at the 2-, 6-, 10-, 14-, 18- and 22-positions with (all-E)-configuration." [] -subset: 3_STAR -synonym: "(6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene" EXACT IUPAC_NAME [IUPAC] -synonym: "(all-E)-2,6,10,15,19,23-hexamethyl-2,6,10,14,18,22-tetracosahexaene" RELATED [NIST_Chemistry_WebBook] -synonym: "Spinacene" RELATED [KEGG_COMPOUND] -synonym: "Squalene" EXACT [KEGG_COMPOUND] -synonym: "squalene" EXACT [UniProt] -synonym: "Supraene" RELATED [KEGG_COMPOUND] -xref: Beilstein:1728920 {source="Beilstein"} -xref: CAS:111-02-4 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: HMDB:HMDB0000256 -xref: KEGG:C00751 -xref: KNApSAcK:C00003755 -xref: LIPID_MAPS_instance:LMPR0106010002 {source="LIPID MAPS"} -xref: MetaCyc:SQUALENE -xref: PDBeChem:SQL -xref: PMID:16341241 {source="Europe PMC"} -xref: PMID:23625688 {source="Europe PMC"} -xref: PMID:24362891 {source="Europe PMC"} -xref: PMID:25286851 {source="Europe PMC"} -xref: PMID:25286853 {source="Europe PMC"} -xref: PMID:25987292 {source="Europe PMC"} -xref: Wikipedia:Squalene +def: "A triterpene consisting of 2,6,10,15,19,23-hexamethyltetracosane having six double bonds at the 2-, 6-, 10-, 14-, 18- and 22-positions with (all-E)-configuration." [] +subset: 3:STAR +synonym: "(6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene" EXACT IUPAC:NAME [IUPAC] +synonym: "(6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene" RELATED IUPAC:NAME [iupac] +synonym: "(all-E)-2,6,10,15,19,23-hexamethyl-2,6,10,14,18,22-tetracosahexaene" RELATED [nist] +synonym: "Spinacene" RELATED [kegg.compound] +synonym: "Squalene" RELATED [kegg.compound] +synonym: "squalene" RELATED [uniprot_ft] +synonym: "Supraene" RELATED [kegg.compound] +xref: beilstein:1728920 {source="beilstein"} +xref: cas:111-02-4 {source="cas"} +xref: hmdb:HMDB0000256 {source="hmdb"} +xref: kegg.compound:C00751 {source="kegg.compound"} +xref: knapsack:C00003755 {source="knapsack"} +xref: lipidmaps:LMPR0106010002 {source="lipidmaps"} +xref: metacyc.compound:SQUALENE {source="metacyc.compound"} +xref: pdb-ccd:SQL {source="pdb-ccd"} +xref: pubmed:16341241 {source="pubmed"} +xref: pubmed:23625688 {source="pubmed"} +xref: pubmed:24362891 {source="pubmed"} +xref: pubmed:25286851 {source="pubmed"} +xref: pubmed:25286853 {source="pubmed"} +xref: pubmed:25987292 {source="pubmed"} +xref: wikipedia.en:Squalene {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35191 ! triterpene relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite @@ -1291,13 +1319,13 @@ name: aldose alt_id: CHEBI:13755 alt_id: CHEBI:22305 alt_id: CHEBI:2561 -def: "Aldehydic parent sugars (polyhydroxy aldehydes H[CH(OH)]nC(=O)H, n >= 2) and their intramolecular hemiacetals." [] -subset: 3_STAR -synonym: "Aldose" EXACT [KEGG_COMPOUND] -synonym: "aldoses" RELATED [ChEBI] -synonym: "an aldose" RELATED [UniProt] -xref: KEGG:C01370 -xref: Wikipedia:Aldose +def: "Aldehydic parent sugars (polyhydroxy aldehydes H[CH(OH)]nC(=O)H, n ≥ 2) and their intramolecular hemiacetals." [] +subset: 3:STAR +synonym: "Aldose" RELATED [kegg.compound] +synonym: "aldoses" RELATED [chebi] +synonym: "an aldose" RELATED [uniprot_ft] +xref: kegg.compound:C01370 {source="kegg.compound"} +xref: wikipedia.en:Aldose {source="wikipedia.en"} is_a: CHEBI:35381 ! monosaccharide [Term] @@ -1308,17 +1336,17 @@ alt_id: CHEBI:13243 alt_id: CHEBI:13797 alt_id: CHEBI:21224 alt_id: CHEBI:6175 -def: "Any alpha-amino acid having L-configuration at the alpha-carbon." [] -subset: 3_STAR -synonym: "L-2-Amino acid" RELATED [KEGG_COMPOUND] -synonym: "L-alpha-amino acid" EXACT [IUPAC] -synonym: "L-alpha-amino acids" EXACT IUPAC_NAME [IUPAC] -synonym: "L-alpha-amino acids" RELATED [ChEBI] -synonym: "L-Amino acid" RELATED [KEGG_COMPOUND] -xref: KEGG:C00151 +def: "Any α-amino acid having L-configuration at the α-carbon." [] +subset: 3:STAR +synonym: "L-2-Amino acid" RELATED [kegg.compound] +synonym: "L-alpha-amino acid" RELATED [iupac] +synonym: "L-alpha-amino acids" EXACT IUPAC:NAME [IUPAC] +synonym: "L-alpha-amino acids" RELATED IUPAC:NAME [chebi, iupac] +synonym: "L-Amino acid" RELATED [kegg.compound] +xref: kegg.compound:C00151 {source="kegg.compound"} is_a: CHEBI:33704 ! alpha-amino acid -relationship: is_conjugate_acid_of CHEBI:59814 ! L-alpha-amino acid anion -relationship: is_tautomer_of CHEBI:59869 ! L-alpha-amino acid zwitterion +relationship: RO:0018034 CHEBI:59814 ! is protonated form of L-alpha-amino acid anion +relationship: RO:0018036 CHEBI:59869 ! is tautomer of L-alpha-amino acid zwitterion [Term] id: CHEBI:15734 @@ -1328,13 +1356,13 @@ alt_id: CHEBI:14887 alt_id: CHEBI:26262 alt_id: CHEBI:57489 alt_id: CHEBI:8406 -def: "A primary alcohol is a compound in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it." [] -subset: 3_STAR -synonym: "1-Alcohol" RELATED [KEGG_COMPOUND] -synonym: "a primary alcohol" RELATED [UniProt] -synonym: "Primary alcohol" EXACT [KEGG_COMPOUND] -synonym: "primary alcohols" RELATED [ChEBI] -xref: KEGG:C00226 +def: "A primary alcohol is a compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it." [] +subset: 3:STAR +synonym: "1-Alcohol" RELATED [kegg.compound] +synonym: "a primary alcohol" RELATED [uniprot_ft] +synonym: "Primary alcohol" RELATED [kegg.compound] +synonym: "primary alcohols" RELATED [chebi] +xref: kegg.compound:C00226 {source="kegg.compound"} is_a: CHEBI:30879 ! alcohol [Term] @@ -1343,30 +1371,31 @@ name: formate alt_id: CHEBI:14276 alt_id: CHEBI:24081 def: "A monocarboxylic acid anion that is the conjugate base of formic acid. Induces severe metabolic acidosis and ocular injury in human subjects." [] -subset: 3_STAR -synonym: "aminate" RELATED [ChEBI] -synonym: "formate" EXACT IUPAC_NAME [IUPAC, UniProt] -synonym: "formiate" RELATED [ChEBI] -synonym: "formic acid, ion(1-)" RELATED [ChemIDplus] -synonym: "formylate" RELATED [ChEBI] -synonym: "HCO2 anion" RELATED [NIST_Chemistry_WebBook] -synonym: "hydrogen carboxylate" RELATED [ChEBI] -synonym: "methanoate" RELATED [ChEBI] -xref: CAS:71-47-6 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:1006 {source="Gmelin"} -xref: HMDB:HMDB0000142 -xref: KEGG:C00058 -xref: MetaCyc:FORMATE -xref: PMID:17190852 {source="Europe PMC"} -xref: PMID:3946945 {source="Europe PMC"} -xref: Reaxys:1901205 {source="Reaxys"} -xref: UM-BBD_compID:c0106 {source="UM-BBD"} -xref: Wikipedia:Formate +subset: 3:STAR +synonym: "aminate" RELATED [chebi] +synonym: "formate" EXACT IUPAC:NAME [IUPAC] +synonym: "formate" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "formiate" RELATED [chebi] +synonym: "formic acid, ion(1-)" RELATED [chemidplus] +synonym: "formylate" RELATED [chebi] +synonym: "HCO2 anion" RELATED [nist] +synonym: "hydrogen carboxylate" RELATED [chebi] +synonym: "methanoate" RELATED [chebi] +xref: cas:71-47-6 {source="cas"} +xref: gmelin:1006 {source="gmelin"} +xref: hmdb:HMDB0000142 {source="hmdb"} +xref: kegg.compound:C00058 {source="kegg.compound"} +xref: metacyc.compound:FORMATE {source="metacyc.compound"} +xref: pubmed:17190852 {source="pubmed"} +xref: pubmed:3946945 {source="pubmed"} +xref: reaxys:1901205 {source="reaxys"} +xref: umbbd.compound:c0106 {source="umbbd.compound"} +xref: wikipedia.en:Formate {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35757 ! monocarboxylic acid anion -relationship: is_conjugate_base_of CHEBI:30751 ! formic acid relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:30751 ! is deprotonated form of formic acid [Term] id: CHEBI:15841 @@ -1374,12 +1403,13 @@ name: polypeptide alt_id: CHEBI:14860 alt_id: CHEBI:8314 def: "A peptide containing ten or more amino acid residues." [] -subset: 3_STAR -synonym: "polipeptido" RELATED [ChEBI] -synonym: "Polypeptid" RELATED [ChEBI] -synonym: "Polypeptide" EXACT [KEGG_COMPOUND] -synonym: "polypeptides" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C00403 +subset: 3:STAR +synonym: "polipeptido" RELATED [chebi] +synonym: "Polypeptid" RELATED [chebi] +synonym: "Polypeptide" RELATED [kegg.compound] +synonym: "polypeptides" EXACT IUPAC:NAME [IUPAC] +synonym: "polypeptides" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C00403 {source="kegg.compound"} is_a: CHEBI:16670 ! peptide is_a: CHEBI:33839 ! macromolecule @@ -1388,32 +1418,35 @@ id: CHEBI:15966 name: D-glutamic acid alt_id: CHEBI:21023 alt_id: CHEBI:4183 -def: "An optically active form of glutamic acid having D-configuration." [] -subset: 3_STAR -synonym: "(2R)-2-aminopentanedioic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "(R)-2-aminopentanedioic acid" RELATED [ChEBI] -synonym: "D-2-Aminoglutaric acid" RELATED [KEGG_COMPOUND] +def: "An optically active form of glutamic acid having D-configuration." [] +subset: 3:STAR +synonym: "(2R)-2-aminopentanedioic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-aminopentanedioic acid" RELATED IUPAC:NAME [iupac] +synonym: "(R)-2-aminopentanedioic acid" RELATED [chebi] +synonym: "D-2-Aminoglutaric acid" RELATED [kegg.compound] synonym: "D-Glutamic acid" EXACT [KEGG_COMPOUND] -synonym: "D-glutamic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "D-Glutaminic acid" RELATED [KEGG_COMPOUND] -synonym: "D-Glutaminsaeure" RELATED [ChEBI] -synonym: "DGL" RELATED [PDBeChem] -synonym: "glutamic acid D-form" RELATED [ChemIDplus] -xref: CAS:6893-26-1 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB02517 -xref: Gmelin:201189 {source="Gmelin"} -xref: HMDB:HMDB0003339 -xref: KEGG:C00217 -xref: KNApSAcK:C00019577 -xref: MetaCyc:D-GLT -xref: PDBeChem:DGL -xref: Reaxys:1723800 {source="Reaxys"} +synonym: "D-Glutamic acid" RELATED [kegg.compound] +synonym: "D-glutamic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "D-glutamic acid" RELATED IUPAC:NAME [iupac] +synonym: "D-Glutaminic acid" RELATED [kegg.compound] +synonym: "D-Glutaminsaeure" RELATED [chebi] +synonym: "DGL" RELATED [pdb-ccd] +synonym: "glutamic acid D-form" RELATED [chemidplus] +xref: cas:6893-26-1 {source="cas"} +xref: drugbank:DB02517 {source="drugbank"} +xref: gmelin:201189 {source="gmelin"} +xref: hmdb:HMDB0003339 {source="hmdb"} +xref: kegg.compound:C00217 {source="kegg.compound"} +xref: knapsack:C00019577 {source="knapsack"} +xref: metacyc.compound:D-GLT {source="metacyc.compound"} +xref: pdb-ccd:DGL {source="pdb-ccd"} +xref: reaxys:1723800 {source="reaxys"} is_a: CHEBI:16733 ! D-alpha-amino acid is_a: CHEBI:18237 ! glutamic acid -relationship: is_conjugate_acid_of CHEBI:29986 ! D-glutamate(1-) -relationship: is_enantiomer_of CHEBI:16015 ! L-glutamic acid relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:29986 ! is protonated form of D-glutamate(1-) +relationship: RO:0018039 CHEBI:16015 ! is enantiomer of L-glutamic acid [Term] id: CHEBI:15986 @@ -1422,10 +1455,10 @@ alt_id: CHEBI:13672 alt_id: CHEBI:14859 alt_id: CHEBI:8312 def: "A nucleobase-containing molecular entity with a polymeric structure comprised of a linear sequence of 13 or more nucleotide residues." [] -subset: 3_STAR -synonym: "Polynucleotide" EXACT [KEGG_COMPOUND] -synonym: "polynucleotides" RELATED [ChEBI] -xref: KEGG:C00419 +subset: 3:STAR +synonym: "Polynucleotide" RELATED [kegg.compound] +synonym: "polynucleotides" RELATED [chebi] +xref: kegg.compound:C00419 {source="kegg.compound"} is_a: CHEBI:33695 ! information biomacromolecule is_a: CHEBI:61120 ! nucleobase-containing molecular entity relationship: has_part CHEBI:50319 ! nucleotide residue @@ -1436,55 +1469,59 @@ name: L-glutamic acid alt_id: CHEBI:21304 alt_id: CHEBI:42825 alt_id: CHEBI:6224 -def: "An optically active form of glutamic acid having L-configuration." [] -subset: 3_STAR -synonym: "(2S)-2-aminopentanedioic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "(S)-2-aminopentanedioic acid" RELATED [ChEBI] -synonym: "(S)-glutamic acid" RELATED [NIST_Chemistry_WebBook] -synonym: "acide glutamique" RELATED INN [ChEBI] -synonym: "acido glutamico" RELATED INN [ChEBI] -synonym: "acidum glutamicum" RELATED INN [ChEBI] -synonym: "E" RELATED [ChEBI] -synonym: "Glu" RELATED [ChEBI] -synonym: "Glutamate" RELATED [KEGG_COMPOUND] -synonym: "GLUTAMIC ACID" RELATED [PDBeChem] -synonym: "glutamic acid" RELATED INN [ChEBI] -synonym: "L-Glu" RELATED [ChEBI] +def: "An optically active form of glutamic acid having L-configuration." [] +subset: 3:STAR +synonym: "(2S)-2-aminopentanedioic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-aminopentanedioic acid" RELATED IUPAC:NAME [iupac] +synonym: "(S)-2-aminopentanedioic acid" RELATED [chebi] +synonym: "(S)-glutamic acid" RELATED [nist] +synonym: "acide glutamique" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +synonym: "acido glutamico" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +synonym: "acidum glutamicum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +synonym: "E" RELATED [chebi] +synonym: "Glu" RELATED [chebi] +synonym: "Glutamate" RELATED [kegg.compound] +synonym: "GLUTAMIC ACID" EXACT [PDBeChem] +synonym: "GLUTAMIC ACID" RELATED [pdb-ccd] +synonym: "glutamic acid" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +synonym: "L-Glu" RELATED [chebi] synonym: "L-Glutamic acid" EXACT [KEGG_COMPOUND] -synonym: "L-glutamic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "L-Glutaminic acid" RELATED [KEGG_COMPOUND] -synonym: "L-Glutaminsaeure" RELATED [ChEBI] -xref: BPDB:2297 -xref: CAS:56-86-0 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:1310 {source="DrugCentral"} -xref: DrugBank:DB00142 -xref: Gmelin:3502 {source="Gmelin"} -xref: HMDB:HMDB0000148 -xref: KEGG:C00025 -xref: KEGG:D00007 -xref: KNApSAcK:C00001358 -xref: LINCS:LSM-36375 -xref: MetaCyc:GLT -xref: PDBeChem:GLU_LFOH -xref: PMID:15739367 {source="Europe PMC"} -xref: PMID:15930465 {source="Europe PMC"} -xref: PMID:16719819 {source="Europe PMC"} -xref: PMID:16892196 {source="Europe PMC"} -xref: PMID:19581495 {source="Europe PMC"} -xref: PMID:22219301 {source="Europe PMC"} -xref: PMID:22735334 {source="Europe PMC"} -xref: Reaxys:1723801 {source="Reaxys"} -xref: Wikipedia:L-Glutamic_Acid +synonym: "L-Glutamic acid" RELATED [kegg.compound] +synonym: "L-glutamic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "L-glutamic acid" RELATED IUPAC:NAME [iupac] +synonym: "L-Glutaminic acid" RELATED [kegg.compound] +synonym: "L-Glutaminsaeure" RELATED [chebi] +xref: bpdb:2297 {source="bpdb"} +xref: cas:56-86-0 {source="cas"} +xref: drugbank:DB00142 {source="drugbank"} +xref: drugcentral:1310 {source="drugcentral"} +xref: gmelin:3502 {source="gmelin"} +xref: hmdb:HMDB0000148 {source="hmdb"} +xref: kegg.compound:C00025 {source="kegg.compound"} +xref: kegg.drug:D00007 {source="kegg.drug"} +xref: knapsack:C00001358 {source="knapsack"} +xref: lincs.smallmolecule:LSM-36375 {source="lincs.smallmolecule"} +xref: metacyc.compound:GLT {source="metacyc.compound"} +xref: pdb-ccd:GLU_LFOH {source="pdb-ccd"} +xref: pubmed:15739367 {source="pubmed"} +xref: pubmed:15930465 {source="pubmed"} +xref: pubmed:16719819 {source="pubmed"} +xref: pubmed:16892196 {source="pubmed"} +xref: pubmed:19581495 {source="pubmed"} +xref: pubmed:22219301 {source="pubmed"} +xref: pubmed:22735334 {source="pubmed"} +xref: reaxys:1723801 {source="reaxys"} +xref: wikipedia.en:L-Glutamic_Acid {source="wikipedia.en"} is_a: CHEBI:18237 ! glutamic acid is_a: CHEBI:24318 ! glutamine family amino acid -relationship: is_conjugate_acid_of CHEBI:29985 ! L-glutamate(1-) -relationship: is_enantiomer_of CHEBI:15966 ! D-glutamic acid relationship: RO:0000087 CHEBI:173085 ! has role ferroptosis inducer relationship: RO:0000087 CHEBI:25512 ! has role neurotransmitter relationship: RO:0000087 CHEBI:27027 ! has role micronutrient relationship: RO:0000087 CHEBI:50733 ! has role nutraceutical relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:29985 ! is protonated form of L-glutamate(1-) +relationship: RO:0018039 CHEBI:15966 ! is enantiomer of D-glutamic acid [Term] id: CHEBI:16134 @@ -1499,71 +1536,73 @@ alt_id: CHEBI:44284 alt_id: CHEBI:44404 alt_id: CHEBI:7434 def: "An azane that consists of a single nitrogen atom covelently bonded to three hydrogen atoms." [] -subset: 3_STAR -synonym: "[NH3]" RELATED [MolBase] +subset: 3:STAR +synonym: "[NH3]" RELATED [molbase] synonym: "AMMONIA" EXACT [PDBeChem] +synonym: "AMMONIA" RELATED [pdb-ccd] synonym: "Ammonia" EXACT [KEGG_COMPOUND] -synonym: "ammonia" EXACT IUPAC_NAME [IUPAC] -synonym: "ammoniac" RELATED [ChEBI] -synonym: "Ammoniak" RELATED [ChemIDplus] -synonym: "amoniaco" RELATED [ChEBI] -synonym: "azane" EXACT IUPAC_NAME [IUPAC] -synonym: "NH3" RELATED [IUPAC, KEGG_COMPOUND] -synonym: "R-717" RELATED [ChEBI] -synonym: "spirit of hartshorn" RELATED [ChemIDplus] -xref: CAS:7664-41-7 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:4625 {source="DrugCentral"} -xref: Gmelin:79 {source="Gmelin"} -xref: HMDB:HMDB0000051 -xref: KEGG:C00014 -xref: KEGG:D02916 -xref: KNApSAcK:C00007267 -xref: MetaCyc:AMMONIA -xref: MolBase:930 -xref: PDBeChem:NH3 -xref: PMID:110589 {source="Europe PMC"} -xref: PMID:11139349 {source="Europe PMC"} -xref: PMID:11540049 {source="Europe PMC"} -xref: PMID:11746427 {source="Europe PMC"} -xref: PMID:11783653 {source="Europe PMC"} -xref: PMID:13753780 {source="Europe PMC"} -xref: PMID:14663195 {source="Europe PMC"} -xref: PMID:15092448 {source="Europe PMC"} -xref: PMID:15094021 {source="Europe PMC"} -xref: PMID:15554424 {source="Europe PMC"} -xref: PMID:15969015 {source="Europe PMC"} -xref: PMID:16008360 {source="Europe PMC"} -xref: PMID:16050680 {source="Europe PMC"} -xref: PMID:16348008 {source="Europe PMC"} -xref: PMID:16349403 {source="Europe PMC"} -xref: PMID:16614889 {source="Europe PMC"} -xref: PMID:16664306 {source="Europe PMC"} -xref: PMID:16842901 {source="Europe PMC"} -xref: PMID:17025297 {source="Europe PMC"} -xref: PMID:17439666 {source="Europe PMC"} -xref: PMID:17569513 {source="Europe PMC"} -xref: PMID:17737668 {source="Europe PMC"} -xref: PMID:18670398 {source="Europe PMC"} -xref: PMID:22002069 {source="Europe PMC"} -xref: PMID:22081570 {source="Europe PMC"} -xref: PMID:22088435 {source="Europe PMC"} -xref: PMID:22100291 {source="Europe PMC"} -xref: PMID:22130175 {source="Europe PMC"} -xref: PMID:22150211 {source="Europe PMC"} -xref: PMID:22240068 {source="Europe PMC"} -xref: PMID:22290316 {source="Europe PMC"} -xref: PMID:22342082 {source="Europe PMC"} -xref: PMID:22385337 {source="Europe PMC"} -xref: PMID:22443779 {source="Europe PMC"} -xref: PMID:22560242 {source="Europe PMC"} -xref: Reaxys:3587154 {source="Reaxys"} -xref: Wikipedia:Ammonia +synonym: "Ammonia" RELATED [kegg.compound] +synonym: "ammonia" EXACT IUPAC:NAME [IUPAC] +synonym: "ammonia" RELATED IUPAC:NAME [iupac] +synonym: "ammoniac" RELATED [chebi] +synonym: "Ammoniak" RELATED [chemidplus] +synonym: "amoniaco" RELATED [chebi] +synonym: "azane" EXACT IUPAC:NAME [IUPAC] +synonym: "azane" RELATED IUPAC:NAME [iupac] +synonym: "NH3" RELATED [iupac, kegg.compound] +synonym: "R-717" RELATED [chebi] +synonym: "spirit of hartshorn" RELATED [chemidplus] +xref: cas:7664-41-7 {source="cas"} +xref: drugcentral:4625 {source="drugcentral"} +xref: gmelin:79 {source="gmelin"} +xref: hmdb:HMDB0000051 {source="hmdb"} +xref: kegg.compound:C00014 {source="kegg.compound"} +xref: kegg.drug:D02916 {source="kegg.drug"} +xref: knapsack:C00007267 {source="knapsack"} +xref: metacyc.compound:AMMONIA {source="metacyc.compound"} +xref: molbase:930 {source="molbase"} +xref: pdb-ccd:NH3 {source="pdb-ccd"} +xref: pubmed:110589 {source="pubmed"} +xref: pubmed:11139349 {source="pubmed"} +xref: pubmed:11540049 {source="pubmed"} +xref: pubmed:11746427 {source="pubmed"} +xref: pubmed:11783653 {source="pubmed"} +xref: pubmed:13753780 {source="pubmed"} +xref: pubmed:14663195 {source="pubmed"} +xref: pubmed:15092448 {source="pubmed"} +xref: pubmed:15094021 {source="pubmed"} +xref: pubmed:15554424 {source="pubmed"} +xref: pubmed:15969015 {source="pubmed"} +xref: pubmed:16008360 {source="pubmed"} +xref: pubmed:16050680 {source="pubmed"} +xref: pubmed:16348008 {source="pubmed"} +xref: pubmed:16349403 {source="pubmed"} +xref: pubmed:16614889 {source="pubmed"} +xref: pubmed:16664306 {source="pubmed"} +xref: pubmed:16842901 {source="pubmed"} +xref: pubmed:17025297 {source="pubmed"} +xref: pubmed:17439666 {source="pubmed"} +xref: pubmed:17569513 {source="pubmed"} +xref: pubmed:17737668 {source="pubmed"} +xref: pubmed:18670398 {source="pubmed"} +xref: pubmed:22002069 {source="pubmed"} +xref: pubmed:22081570 {source="pubmed"} +xref: pubmed:22088435 {source="pubmed"} +xref: pubmed:22100291 {source="pubmed"} +xref: pubmed:22130175 {source="pubmed"} +xref: pubmed:22150211 {source="pubmed"} +xref: pubmed:22240068 {source="pubmed"} +xref: pubmed:22290316 {source="pubmed"} +xref: pubmed:22342082 {source="pubmed"} +xref: pubmed:22385337 {source="pubmed"} +xref: pubmed:22443779 {source="pubmed"} +xref: pubmed:22560242 {source="pubmed"} +xref: reaxys:3587154 {source="reaxys"} +xref: wikipedia.en:Ammonia {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:138675 ! gas molecular entity is_a: CHEBI:35107 ! azane is_a: CHEBI:37176 ! mononuclear parent hydride -relationship: is_conjugate_acid_of CHEBI:29337 ! azanide -relationship: is_conjugate_base_of CHEBI:28938 ! ammonium relationship: RO:0000087 CHEBI:228364 ! has role NMR chemical shift reference compound relationship: RO:0000087 CHEBI:25212 ! has role metabolite relationship: RO:0000087 CHEBI:50910 ! has role neurotoxin @@ -1571,6 +1610,8 @@ relationship: RO:0000087 CHEBI:59740 ! has role nucleophilic reagent relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77941 ! has role EC 3.5.1.4 (amidase) inhibitor relationship: RO:0000087 CHEBI:78433 ! has role refrigerant +relationship: RO:0018033 CHEBI:28938 ! is deprotonated form of ammonium +relationship: RO:0018034 CHEBI:29337 ! is protonated form of azanide [Term] id: CHEBI:16137 @@ -1579,16 +1620,16 @@ alt_id: CHEBI:13989 alt_id: CHEBI:13992 alt_id: CHEBI:23221 alt_id: CHEBI:3673 -def: "A mucopolysaccharide composed of repeating beta-D-glucopyranuronosyl-(1->3)-beta-D-N-acetylgalactosaminyl units." [] -subset: 3_STAR -synonym: "Chondroitin" RELATED [KEGG_COMPOUND] -synonym: "Chondroitin-D-glucuronate" RELATED [KEGG_COMPOUND] -xref: KEGG:C00401 -xref: KEGG:G11334 +def: "A mucopolysaccharide composed of repeating β-D-glucopyranuronosyl-(1→3)-β-D-N-acetylgalactosaminyl units." [] +subset: 3:STAR +synonym: "Chondroitin" RELATED [kegg.compound] +synonym: "Chondroitin-D-glucuronate" RELATED [kegg.compound] +xref: kegg.compound:C00401 {source="kegg.compound"} +xref: kegg.glycan:G11334 {source="kegg.glycan"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:37395 ! mucopolysaccharide -relationship: is_conjugate_acid_of CHEBI:57652 ! chondroitin D-glucuronate anion relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018034 CHEBI:57652 ! is protonated form of chondroitin D-glucuronate anion [Term] id: CHEBI:16189 @@ -1597,69 +1638,74 @@ alt_id: CHEBI:15135 alt_id: CHEBI:45687 alt_id: CHEBI:9335 def: "A sulfur oxoanion obtained by deprotonation of both OH groups of sulfuric acid." [] -subset: 3_STAR -synonym: "[SO4](2-)" RELATED [IUPAC] -synonym: "SO4(2-)" RELATED [IUPAC] +subset: 3:STAR +synonym: "[SO4](2-)" RELATED [iupac] +synonym: "SO4(2-)" RELATED [iupac] synonym: "Sulfate" EXACT [KEGG_COMPOUND] -synonym: "sulfate" EXACT IUPAC_NAME [IUPAC, UniProt] -synonym: "Sulfate anion(2-)" RELATED [HMDB] -synonym: "Sulfate dianion" RELATED [HMDB] -synonym: "SULFATE ION" RELATED [PDBeChem] -synonym: "Sulfate(2-)" RELATED [HMDB] -synonym: "Sulfuric acid ion(2-)" RELATED [HMDB] -synonym: "sulphate" RELATED [ChEBI] -synonym: "sulphate ion" RELATED [ChEBI] -synonym: "tetraoxidosulfate(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "tetraoxosulfate(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "tetraoxosulfate(VI)" EXACT IUPAC_NAME [IUPAC] -xref: CAS:14808-79-8 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:2120 {source="Gmelin"} -xref: HMDB:HMDB0001448 -xref: KEGG:C00059 -xref: KEGG:D05963 -xref: MetaCyc:SULFATE -xref: PDBeChem:SO4 -xref: PMID:11200094 {source="Europe PMC"} -xref: PMID:11452993 {source="Europe PMC"} -xref: PMID:11581495 {source="Europe PMC"} -xref: PMID:11798107 {source="Europe PMC"} -xref: PMID:12166931 {source="Europe PMC"} -xref: PMID:12668033 {source="Europe PMC"} -xref: PMID:14597181 {source="Europe PMC"} -xref: PMID:15093386 {source="Europe PMC"} -xref: PMID:15984785 {source="Europe PMC"} -xref: PMID:16186560 {source="Europe PMC"} -xref: PMID:16345535 {source="Europe PMC"} -xref: PMID:16347366 {source="Europe PMC"} -xref: PMID:16348007 {source="Europe PMC"} -xref: PMID:16483812 {source="Europe PMC"} -xref: PMID:16534979 {source="Europe PMC"} -xref: PMID:16656509 {source="Europe PMC"} -xref: PMID:16742508 {source="Europe PMC"} -xref: PMID:16742518 {source="Europe PMC"} -xref: PMID:17120760 {source="Europe PMC"} -xref: PMID:17420092 {source="Europe PMC"} -xref: PMID:17439666 {source="Europe PMC"} -xref: PMID:17709180 {source="Europe PMC"} -xref: PMID:18398178 {source="Europe PMC"} -xref: PMID:18815700 {source="Europe PMC"} -xref: PMID:18846414 {source="Europe PMC"} -xref: PMID:19047345 {source="Europe PMC"} -xref: PMID:19244483 {source="Europe PMC"} -xref: PMID:19544990 {source="Europe PMC"} -xref: PMID:19628332 {source="Europe PMC"} -xref: PMID:19812358 {source="Europe PMC"} -xref: PMID:30398859 {source="Europe PMC"} -xref: Reaxys:3648446 {source="Reaxys"} -xref: Wikipedia:Sulfate +synonym: "Sulfate" RELATED [kegg.compound] +synonym: "sulfate" EXACT IUPAC:NAME [IUPAC] +synonym: "sulfate" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "Sulfate anion(2-)" RELATED [hmdb] +synonym: "Sulfate dianion" RELATED [hmdb] +synonym: "SULFATE ION" RELATED [pdb-ccd] +synonym: "Sulfate(2-)" RELATED [hmdb] +synonym: "Sulfuric acid ion(2-)" RELATED [hmdb] +synonym: "sulphate" RELATED [chebi] +synonym: "sulphate ion" RELATED [chebi] +synonym: "tetraoxidosulfate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxidosulfate(2-)" RELATED IUPAC:NAME [iupac] +synonym: "tetraoxosulfate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxosulfate(2-)" RELATED IUPAC:NAME [iupac] +synonym: "tetraoxosulfate(VI)" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxosulfate(VI)" RELATED IUPAC:NAME [iupac] +xref: cas:14808-79-8 {source="cas"} +xref: gmelin:2120 {source="gmelin"} +xref: hmdb:HMDB0001448 {source="hmdb"} +xref: kegg.compound:C00059 {source="kegg.compound"} +xref: kegg.drug:D05963 {source="kegg.drug"} +xref: metacyc.compound:SULFATE {source="metacyc.compound"} +xref: pdb-ccd:SO4 {source="pdb-ccd"} +xref: pubmed:11200094 {source="pubmed"} +xref: pubmed:11452993 {source="pubmed"} +xref: pubmed:11581495 {source="pubmed"} +xref: pubmed:11798107 {source="pubmed"} +xref: pubmed:12166931 {source="pubmed"} +xref: pubmed:12668033 {source="pubmed"} +xref: pubmed:14597181 {source="pubmed"} +xref: pubmed:15093386 {source="pubmed"} +xref: pubmed:15984785 {source="pubmed"} +xref: pubmed:16186560 {source="pubmed"} +xref: pubmed:16345535 {source="pubmed"} +xref: pubmed:16347366 {source="pubmed"} +xref: pubmed:16348007 {source="pubmed"} +xref: pubmed:16483812 {source="pubmed"} +xref: pubmed:16534979 {source="pubmed"} +xref: pubmed:16656509 {source="pubmed"} +xref: pubmed:16742508 {source="pubmed"} +xref: pubmed:16742518 {source="pubmed"} +xref: pubmed:17120760 {source="pubmed"} +xref: pubmed:17420092 {source="pubmed"} +xref: pubmed:17439666 {source="pubmed"} +xref: pubmed:17709180 {source="pubmed"} +xref: pubmed:18398178 {source="pubmed"} +xref: pubmed:18815700 {source="pubmed"} +xref: pubmed:18846414 {source="pubmed"} +xref: pubmed:19047345 {source="pubmed"} +xref: pubmed:19244483 {source="pubmed"} +xref: pubmed:19544990 {source="pubmed"} +xref: pubmed:19628332 {source="pubmed"} +xref: pubmed:19812358 {source="pubmed"} +xref: pubmed:30398859 {source="pubmed"} +xref: reaxys:3648446 {source="reaxys"} +xref: wikipedia.en:Sulfate {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33482 ! sulfur oxoanion is_a: CHEBI:48154 ! sulfur oxide is_a: CHEBI:79388 ! divalent inorganic anion -relationship: is_conjugate_base_of CHEBI:45696 ! hydrogensulfate relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:45696 ! is deprotonated form of hydrogensulfate [Term] id: CHEBI:16234 @@ -1668,23 +1714,26 @@ alt_id: CHEBI:13365 alt_id: CHEBI:13419 alt_id: CHEBI:44641 alt_id: CHEBI:5594 -subset: 3_STAR -synonym: "HO-" RELATED [KEGG_COMPOUND] -synonym: "hydridooxygenate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydroxide" EXACT IUPAC_NAME [IUPAC] -synonym: "HYDROXIDE ION" RELATED [PDBeChem] -synonym: "Hydroxide ion" RELATED [KEGG_COMPOUND] -synonym: "OH(-)" RELATED [IUPAC] -synonym: "OH-" RELATED [KEGG_COMPOUND] -synonym: "oxidanide" EXACT IUPAC_NAME [IUPAC] -xref: CAS:14280-30-9 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:24714 {source="Gmelin"} -xref: KEGG:C01328 -xref: PDBeChem:OH +subset: 3:STAR +synonym: "HO-" RELATED [kegg.compound] +synonym: "hydridooxygenate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydridooxygenate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "hydroxide" EXACT IUPAC:NAME [IUPAC] +synonym: "hydroxide" RELATED IUPAC:NAME [iupac] +synonym: "HYDROXIDE ION" RELATED [pdb-ccd] +synonym: "Hydroxide ion" RELATED [kegg.compound] +synonym: "OH(-)" RELATED [iupac] +synonym: "OH-" RELATED [kegg.compound] +synonym: "oxidanide" EXACT IUPAC:NAME [IUPAC] +synonym: "oxidanide" RELATED IUPAC:NAME [iupac] +xref: cas:14280-30-9 {source="cas"} +xref: gmelin:24714 {source="gmelin"} +xref: kegg.compound:C01328 {source="kegg.compound"} +xref: pdb-ccd:OH {source="pdb-ccd"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33693 ! oxygen hydride -relationship: is_conjugate_base_of CHEBI:15377 ! water relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018033 CHEBI:15377 ! is deprotonated form of water [Term] id: CHEBI:16247 @@ -1693,15 +1742,15 @@ alt_id: CHEBI:14816 alt_id: CHEBI:26063 alt_id: CHEBI:8150 def: "A lipid containing phosphoric acid as a mono- or di-ester. The term encompasses phosphatidic acids and phosphoglycerides." [] -subset: 3_STAR -synonym: "a phospholipid derivative" RELATED [UniProt] -synonym: "Phospholipid" EXACT [KEGG_COMPOUND] -synonym: "phospholipids" RELATED [ChEBI] -xref: KEGG:C00865 +subset: 3:STAR +synonym: "a phospholipid derivative" RELATED [uniprot_ft] +synonym: "Phospholipid" RELATED [kegg.compound] +synonym: "phospholipids" RELATED [chebi] +xref: kegg.compound:C00865 {source="kegg.compound"} is_a: CHEBI:18059 ! lipid is_a: CHEBI:25703 ! organic phosphate is_a: CHEBI:37734 ! phosphoric ester -relationship: is_conjugate_acid_of CHEBI:62643 ! anionic phospholipid +relationship: RO:0018034 CHEBI:62643 ! is protonated form of anionic phospholipid [Term] id: CHEBI:16335 @@ -1712,59 +1761,63 @@ alt_id: CHEBI:2472 alt_id: CHEBI:40558 alt_id: CHEBI:40825 alt_id: CHEBI:40906 -def: "A ribonucleoside composed of a molecule of adenine attached to a ribofuranose moiety via a beta-N(9)-glycosidic bond." [] -subset: 3_STAR -synonym: "(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" RELATED [DrugBank] -synonym: "6-Amino-9-beta-D-ribofuranosyl-9H-purine" RELATED [ChemIDplus] -synonym: "9-beta-D-Ribofuranosidoadenine" RELATED [ChemIDplus] -synonym: "9-beta-D-Ribofuranosyl-9H-purin-6-amine" RELATED [ChemIDplus] -synonym: "9-beta-D-ribofuranosyl-9H-purin-6-amine" RELATED [ChEBI] -synonym: "9-beta-D-ribofuranosyladenine" RELATED [HMDB] -synonym: "Ade-Rib" RELATED [CBN] -synonym: "adenine riboside" RELATED [HMDB] -synonym: "Adenocard" RELATED BRAND_NAME [DrugBank] -synonym: "Adenocor" RELATED BRAND_NAME [DrugBank] -synonym: "Adenoscan" RELATED BRAND_NAME [DrugBank] -synonym: "Adenosin" RELATED [ChEBI] +alt_id: CHEBI:40911 +def: "A ribonucleoside composed of a molecule of adenine attached to a ribofuranose moiety via a β‒N9-glycosidic bond." [] +subset: 3:STAR +synonym: "(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" RELATED [drugbank] +synonym: "6-Amino-9-beta-D-ribofuranosyl-9H-purine" RELATED [chemidplus] +synonym: "9-beta-D-Ribofuranosidoadenine" RELATED [chemidplus] +synonym: "9-beta-D-Ribofuranosyl-9H-purin-6-amine" RELATED [chemidplus] +synonym: "9-beta-D-ribofuranosyl-9H-purin-6-amine" RELATED [chebi] +synonym: "9-beta-D-ribofuranosyladenine" RELATED [hmdb] +synonym: "Ade-Rib" RELATED [iubmb] +synonym: "adenine riboside" RELATED [hmdb] +synonym: "Adenocard" RELATED BRAND:NAME [drugbank] +synonym: "Adenocor" RELATED BRAND:NAME [drugbank] +synonym: "Adenoscan" RELATED BRAND:NAME [drugbank] +synonym: "Adenosin" RELATED [chebi] synonym: "ADENOSINE" EXACT [PDBeChem] +synonym: "ADENOSINE" RELATED [pdb-ccd] synonym: "Adenosine" EXACT [KEGG_COMPOUND] -synonym: "adenosine" EXACT IUPAC_NAME [IUPAC, UniProt] -synonym: "Ado" RELATED [CBN] -synonym: "beta-D-adenosine" RELATED [ChemIDplus] -xref: CAS:58-61-7 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:90 {source="DrugCentral"} -xref: DrugBank:DB00640 -xref: ECMDB:ECMDB00050 -xref: Gmelin:53385 {source="Gmelin"} -xref: HMDB:HMDB0000050 -xref: KEGG:C00212 -xref: KEGG:D00045 -xref: KNApSAcK:C00007444 -xref: LINCS:LSM-28568 -xref: MetaCyc:ADENOSINE -xref: PDBeChem:ADN -xref: PDBeChem:ArF00 -xref: PDBeChem:ArS00 -xref: PMID:11213237 {source="Europe PMC"} -xref: PMID:11820865 {source="Europe PMC"} -xref: PMID:11978011 {source="Europe PMC"} -xref: PMID:16183671 {source="Europe PMC"} -xref: PMID:16917093 {source="Europe PMC"} -xref: PMID:17190852 {source="Europe PMC"} -xref: PMID:18000974 {source="Europe PMC"} -xref: PMID:323854 {source="Europe PMC"} -xref: Reaxys:93029 {source="Reaxys"} -xref: Wikipedia:Adenosine -xref: YMDB:YMDB00058 +synonym: "Adenosine" RELATED [kegg.compound] +synonym: "adenosine" EXACT IUPAC:NAME [IUPAC] +synonym: "adenosine" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "Ado" RELATED [iubmb] +synonym: "beta-D-adenosine" RELATED [chemidplus] +xref: cas:58-61-7 {source="cas"} +xref: drugbank:DB00640 {source="drugbank"} +xref: drugcentral:90 {source="drugcentral"} +xref: ecmdb:ECMDB00050 {source="ecmdb"} +xref: gmelin:53385 {source="gmelin"} +xref: hmdb:HMDB0000050 {source="hmdb"} +xref: kegg.compound:C00212 {source="kegg.compound"} +xref: kegg.drug:D00045 {source="kegg.drug"} +xref: knapsack:C00007444 {source="knapsack"} +xref: lincs.smallmolecule:LSM-28568 {source="lincs.smallmolecule"} +xref: metacyc.compound:ADENOSINE {source="metacyc.compound"} +xref: pdb-ccd:ADN {source="pdb-ccd"} +xref: pdb-ccd:ArF00 {source="pdb-ccd"} +xref: pdb-ccd:ArS00 {source="pdb-ccd"} +xref: pubmed:11213237 {source="pubmed"} +xref: pubmed:11820865 {source="pubmed"} +xref: pubmed:11978011 {source="pubmed"} +xref: pubmed:16183671 {source="pubmed"} +xref: pubmed:16917093 {source="pubmed"} +xref: pubmed:17190852 {source="pubmed"} +xref: pubmed:18000974 {source="pubmed"} +xref: pubmed:323854 {source="pubmed"} +xref: reaxys:93029 {source="reaxys"} +xref: wikipedia.en:Adenosine {source="wikipedia.en"} +xref: ymdb:YMDB00058 {source="ymdb"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:142355 ! purines D-ribonucleoside is_a: CHEBI:22260 ! adenosines -relationship: has_functional_parent CHEBI:16708 ! adenine relationship: RO:0000087 CHEBI:35480 ! has role analgesic relationship: RO:0000087 CHEBI:35620 ! has role vasodilator agent relationship: RO:0000087 CHEBI:38070 ! has role anti-arrhythmia drug relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018038 CHEBI:16708 ! has functional parent adenine [Term] id: CHEBI:16336 @@ -1772,32 +1825,33 @@ name: hyaluronic acid alt_id: CHEBI:14412 alt_id: CHEBI:24622 alt_id: CHEBI:24623 +alt_id: CHEBI:30942 alt_id: CHEBI:5772 -def: "A mucopolysaccharide composed of N-acetylglucosamine and glucuronic acid subunits. It is found in the connective tissues of vertebrates. A principal constituent of the extracellular matrix (ECM), it mediates the growth and metastasis of tumour cells." [] -subset: 3_STAR -synonym: "[beta-D-glucopyranuronosyl-(1->3)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)]n" RELATED [ChEBI] -synonym: "[beta-N-Acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)]n" RELATED [KEGG_COMPOUND] -synonym: "acide hyaluronique" RELATED [ChEBI] -synonym: "acido hialuronico" RELATED [ChEBI] -synonym: "hyaluronan" RELATED [ChEBI] -synonym: "Hyaluronic acid" EXACT [KEGG_COMPOUND] -synonym: "Hyaluronsaeure" RELATED [ChEBI] -xref: Beilstein:8538277 {source="Beilstein"} -xref: CAS:9004-61-9 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: HMDB:HMDB0010366 -xref: KEGG:C00518 -xref: KEGG:D08043 -xref: KEGG:G10505 -xref: PMID:11122186 {source="Europe PMC"} -xref: PMID:18056362 {source="Europe PMC"} -xref: PMID:18290544 {source="Europe PMC"} -xref: Reaxys:8187837 {source="Reaxys"} -xref: Wikipedia:Hyaluronan +def: "A mucopolysaccharide composed of N-acetylglucosamine and glucuronic acid subunits. It is found in the connective tissues of vertebrates. A principal constituent of the extracellular matrix (ECM), it mediates the growth and metastasis of tumour cells." [] +subset: 3:STAR +synonym: "[beta-D-glucopyranuronosyl-(1->3)-2-(acetylamino)-2-deoxy-beta-D-glucopyranosyl-(1->4)]n" RELATED [chebi] +synonym: "[beta-N-Acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)]n" RELATED [kegg.compound] +synonym: "acide hyaluronique" RELATED [chebi] +synonym: "acido hialuronico" RELATED [chebi] +synonym: "hyaluronan" RELATED [chebi] +synonym: "Hyaluronic acid" RELATED [kegg.compound] +synonym: "Hyaluronsaeure" RELATED [chebi] +xref: beilstein:8538277 {source="beilstein"} +xref: cas:9004-61-9 {source="cas"} +xref: hmdb:HMDB0010366 {source="hmdb"} +xref: kegg.compound:C00518 {source="kegg.compound"} +xref: kegg.drug:D08043 {source="kegg.drug"} +xref: kegg.glycan:G10505 {source="kegg.glycan"} +xref: pubmed:11122186 {source="pubmed"} +xref: pubmed:18056362 {source="pubmed"} +xref: pubmed:18290544 {source="pubmed"} +xref: reaxys:8187837 {source="reaxys"} +xref: wikipedia.en:Hyaluronan {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:37395 ! mucopolysaccharide is_a: CHEBI:72813 ! exopolysaccharide -relationship: is_conjugate_acid_of CHEBI:132153 ! hyaluronate relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:132153 ! is protonated form of hyaluronate [Term] id: CHEBI:16526 @@ -1809,57 +1863,63 @@ alt_id: CHEBI:13285 alt_id: CHEBI:23011 alt_id: CHEBI:3283 alt_id: CHEBI:48829 -def: "A one-carbon compound with formula CO2 in which the carbon is attached to each oxygen atom by a double bond. A colourless, odourless gas under normal conditions, it is produced during respiration by all animals, fungi and microorganisms that depend directly or indirectly on living or decaying plants for food." [] -subset: 3_STAR -synonym: "[CO2]" RELATED [MolBase] +def: "A one-carbon compound with formula CO2 in which the carbon is attached to each oxygen atom by a double bond. A colourless, odourless gas under normal conditions, it is produced during respiration by all animals, fungi and microorganisms that depend directly or indirectly on living or decaying plants for food." [] +subset: 3:STAR +synonym: "[CO2]" RELATED [molbase] synonym: "CARBON DIOXIDE" EXACT [PDBeChem] +synonym: "CARBON DIOXIDE" RELATED [pdb-ccd] synonym: "Carbon dioxide" EXACT [KEGG_COMPOUND] -synonym: "carbon dioxide" EXACT IUPAC_NAME [IUPAC] -synonym: "carbonic anhydride" RELATED [UM-BBD] -synonym: "CO2" RELATED [KEGG_COMPOUND, UniProt] -synonym: "dioxidocarbon" EXACT IUPAC_NAME [IUPAC] -synonym: "E 290" RELATED [ChEBI] -synonym: "E-290" RELATED [ChEBI] -synonym: "E290" RELATED [ChEBI] -synonym: "methanedione" EXACT IUPAC_NAME [IUPAC] -synonym: "R-744" RELATED [ChEBI] -xref: CAS:124-38-9 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:4256 {source="DrugCentral"} -xref: Gmelin:989 {source="Gmelin"} -xref: HMDB:HMDB0001967 -xref: KEGG:C00011 -xref: KEGG:D00004 -xref: MetaCyc:CARBON-DIOXIDE -xref: MolBase:752 -xref: PDBeChem:CO2 -xref: PMID:10826146 {source="Europe PMC"} -xref: PMID:11094503 {source="Europe PMC"} -xref: PMID:11584085 {source="Europe PMC"} -xref: PMID:11802652 {source="Europe PMC"} -xref: PMID:14639145 {source="Europe PMC"} -xref: PMID:15050588 {source="Europe PMC"} -xref: PMID:16591971 {source="Europe PMC"} -xref: PMID:16656478 {source="Europe PMC"} -xref: PMID:16659660 {source="Europe PMC"} -xref: PMID:17190796 {source="Europe PMC"} -xref: PMID:17448243 {source="Europe PMC"} -xref: PMID:17878298 {source="Europe PMC"} -xref: PMID:17884085 {source="Europe PMC"} -xref: PMID:19043767 {source="Europe PMC"} -xref: PMID:19259576 {source="Europe PMC"} -xref: PMID:19854893 {source="Europe PMC"} -xref: PMID:23384758 {source="Europe PMC"} -xref: PMID:23828359 {source="Europe PMC"} -xref: PMID:24258718 {source="Europe PMC"} -xref: PMID:8482095 {source="Europe PMC"} -xref: PMID:8818713 {source="Europe PMC"} -xref: PMID:8869828 {source="Europe PMC"} -xref: PMID:9611769 {source="Europe PMC"} -xref: PMID:9730350 {source="Europe PMC"} -xref: PPDB:119 -xref: Reaxys:1900390 {source="Reaxys"} -xref: UM-BBD_compID:c0131 {source="UM-BBD"} -xref: Wikipedia:Carbon_dioxide +synonym: "Carbon dioxide" RELATED [kegg.compound] +synonym: "carbon dioxide" EXACT IUPAC:NAME [IUPAC] +synonym: "carbon dioxide" RELATED IUPAC:NAME [iupac] +synonym: "carbonic anhydride" RELATED [umbbd.compound] +synonym: "CO(2)" RELATED [uniprot_ft] +synonym: "CO2" RELATED [kegg.compound] +synonym: "dioxidocarbon" EXACT IUPAC:NAME [IUPAC] +synonym: "dioxidocarbon" RELATED IUPAC:NAME [iupac] +synonym: "E 290" RELATED [chebi] +synonym: "E-290" RELATED [chebi] +synonym: "E290" RELATED [chebi] +synonym: "methanedione" EXACT IUPAC:NAME [IUPAC] +synonym: "methanedione" RELATED IUPAC:NAME [iupac] +synonym: "R-744" RELATED [chebi] +xref: cas:124-38-9 {source="cas"} +xref: drugcentral:4256 {source="drugcentral"} +xref: gmelin:989 {source="gmelin"} +xref: hmdb:HMDB0001967 {source="hmdb"} +xref: kegg.compound:C00011 {source="kegg.compound"} +xref: kegg.drug:D00004 {source="kegg.drug"} +xref: metacyc.compound:CARBON-DIOXIDE {source="metacyc.compound"} +xref: molbase:752 {source="molbase"} +xref: pdb-ccd:CO2 {source="pdb-ccd"} +xref: ppdb:119 {source="ppdb"} +xref: pubmed:10826146 {source="pubmed"} +xref: pubmed:11094503 {source="pubmed"} +xref: pubmed:11584085 {source="pubmed"} +xref: pubmed:11802652 {source="pubmed"} +xref: pubmed:14639145 {source="pubmed"} +xref: pubmed:15050588 {source="pubmed"} +xref: pubmed:16591971 {source="pubmed"} +xref: pubmed:16656478 {source="pubmed"} +xref: pubmed:16659660 {source="pubmed"} +xref: pubmed:17190796 {source="pubmed"} +xref: pubmed:17448243 {source="pubmed"} +xref: pubmed:17878298 {source="pubmed"} +xref: pubmed:17884085 {source="pubmed"} +xref: pubmed:19043767 {source="pubmed"} +xref: pubmed:19259576 {source="pubmed"} +xref: pubmed:19854893 {source="pubmed"} +xref: pubmed:23384758 {source="pubmed"} +xref: pubmed:23828359 {source="pubmed"} +xref: pubmed:24258718 {source="pubmed"} +xref: pubmed:8482095 {source="pubmed"} +xref: pubmed:8818713 {source="pubmed"} +xref: pubmed:8869828 {source="pubmed"} +xref: pubmed:9611769 {source="pubmed"} +xref: pubmed:9730350 {source="pubmed"} +xref: reaxys:1900390 {source="reaxys"} +xref: umbbd.compound:c0131 {source="umbbd.compound"} +xref: wikipedia.en:Carbon_dioxide {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:138675 ! gas molecular entity is_a: CHEBI:23014 ! carbon oxide @@ -1882,12 +1942,12 @@ id: CHEBI:16541 name: protein polypeptide chain alt_id: CHEBI:8526 def: "A naturally occurring polypeptide synthesized at the ribosome." [] -subset: 3_STAR -synonym: "a protein" RELATED [UniProt] -synonym: "polypeptide chain" RELATED [ChEBI] -synonym: "Protein" RELATED [KEGG_COMPOUND] -synonym: "protein polypeptide chains" RELATED [ChEBI] -xref: KEGG:C00017 +subset: 3:STAR +synonym: "a protein" RELATED [uniprot_ft] +synonym: "polypeptide chain" RELATED [chebi] +synonym: "Protein" RELATED [kegg.compound] +synonym: "protein polypeptide chains" RELATED [chebi] +xref: kegg.compound:C00017 {source="kegg.compound"} is_a: CHEBI:15841 ! polypeptide relationship: has_part CHEBI:33700 ! proteinogenic amino-acid residue @@ -1897,24 +1957,26 @@ name: carbohydrate alt_id: CHEBI:15131 alt_id: CHEBI:23008 alt_id: CHEBI:9318 -def: "Any member of the class of organooxygen compounds that is a polyhydroxy-aldehyde or -ketone or a lactol resulting from their intramolecular condensation (monosaccharides); substances derived from these by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom; and polymeric products arising by intermolecular acetal formation between two or more such molecules (disaccharides, polysaccharides and oligosaccharides). Carbohydrates contain only carbon, hydrogen and oxygen atoms; prior to any oxidation or reduction, most have the empirical formula Cm(H2O)n. Compounds obtained from carbohydrates by substitution, etc., are known as carbohydrate derivatives and may contain other elements. Cyclitols are generally not regarded as carbohydrates." [] -subset: 3_STAR -synonym: "a carbohydrate" RELATED [UniProt] -synonym: "carbohidrato" RELATED [IUPAC] -synonym: "carbohidratos" RELATED [IUPAC] -synonym: "carbohydrate" EXACT IUPAC_NAME [IUPAC] -synonym: "carbohydrates" EXACT IUPAC_NAME [IUPAC] -synonym: "glucide" RELATED [ChEBI] -synonym: "glucides" RELATED [ChEBI] -synonym: "glucido" RELATED [ChEBI] -synonym: "glucidos" RELATED [ChEBI] -synonym: "hydrates de carbone" RELATED [ChEBI] -synonym: "Kohlenhydrat" RELATED [ChEBI] -synonym: "Kohlenhydrate" RELATED [ChEBI] -synonym: "saccharide" RELATED [IUPAC] -synonym: "saccharides" RELATED [IUPAC] -synonym: "saccharidum" RELATED [ChEBI] -xref: Wikipedia:Carbohydrate +def: "Any member of the class of organooxygen compounds that is a polyhydroxy-aldehyde or -ketone or a lactol resulting from their intramolecular condensation (monosaccharides); substances derived from these by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom; and polymeric products arising by intermolecular acetal formation between two or more such molecules (disaccharides, polysaccharides and oligosaccharides). Carbohydrates contain only carbon, hydrogen and oxygen atoms; prior to any oxidation or reduction, most have the empirical formula Cm(H2O)n. Compounds obtained from carbohydrates by substitution, etc., are known as carbohydrate derivatives and may contain other elements. Cyclitols are generally not regarded as carbohydrates." [] +subset: 3:STAR +synonym: "a carbohydrate" RELATED [uniprot_ft] +synonym: "carbohidrato" RELATED [iupac] +synonym: "carbohidratos" RELATED [iupac] +synonym: "carbohydrate" EXACT IUPAC:NAME [IUPAC] +synonym: "carbohydrate" RELATED IUPAC:NAME [iupac] +synonym: "carbohydrates" EXACT IUPAC:NAME [IUPAC] +synonym: "carbohydrates" RELATED IUPAC:NAME [iupac] +synonym: "glucide" RELATED [chebi] +synonym: "glucides" RELATED [chebi] +synonym: "glucido" RELATED [chebi] +synonym: "glucidos" RELATED [chebi] +synonym: "hydrates de carbone" RELATED [chebi] +synonym: "Kohlenhydrat" RELATED [chebi] +synonym: "Kohlenhydrate" RELATED [chebi] +synonym: "saccharide" RELATED [iupac] +synonym: "saccharides" RELATED [iupac] +synonym: "saccharidum" RELATED [chebi] +xref: wikipedia.en:Carbohydrate {source="wikipedia.en"} is_a: CHEBI:78616 ! carbohydrates and carbohydrate derivatives [Term] @@ -1924,28 +1986,28 @@ alt_id: CHEBI:26257 alt_id: CHEBI:45028 alt_id: CHEBI:8399 def: "An oxo dicarboxylic acid that consists of 4-hydroxycyclohexa-2,5-diene-1-carboxylic acid substituted by a 2-carboxy-2-oxoethyl group at position 1." [] -subset: 3_STAR -synonym: "1-Carboxy-4-hydroxy-2,5-cyclohexadiene-1-pyruvic acid" RELATED [ChemIDplus] -synonym: "1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1-propanoic acid" RELATED [ChemIDplus] -synonym: "PREPHENIC ACID" EXACT [PDBeChem] -synonym: "Prephenic acid" EXACT [KEGG_COMPOUND] -xref: AGR:IND44654981 {source="Europe PMC"} -xref: CAS:126-49-8 {source="ChemIDplus"} -xref: DrugBank:DB08427 -xref: HMDB:HMDB0012283 -xref: KNApSAcK:C00019632 -xref: PDBeChem:PRE -xref: PMID:1156090 {source="Europe PMC"} -xref: PMID:13363412 {source="Europe PMC"} -xref: PMID:14185725 {source="Europe PMC"} -xref: PMID:155813 {source="Europe PMC"} -xref: Reaxys:2698270 {source="Reaxys"} -xref: Wikipedia:Prephenic_acid +subset: 3:STAR +synonym: "1-Carboxy-4-hydroxy-2,5-cyclohexadiene-1-pyruvic acid" RELATED [chemidplus] +synonym: "1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1-propanoic acid" RELATED [chemidplus] +synonym: "PREPHENIC ACID" RELATED [pdb-ccd] +synonym: "Prephenic acid" RELATED [kegg.compound] +xref: agr:IND44654981 {source="agr"} +xref: cas:126-49-8 {source="cas"} +xref: drugbank:DB08427 {source="drugbank"} +xref: hmdb:HMDB0012283 {source="hmdb"} +xref: knapsack:C00019632 {source="knapsack"} +xref: pdb-ccd:PRE {source="pdb-ccd"} +xref: pubmed:1156090 {source="pubmed"} +xref: pubmed:13363412 {source="pubmed"} +xref: pubmed:14185725 {source="pubmed"} +xref: pubmed:155813 {source="pubmed"} +xref: reaxys:2698270 {source="reaxys"} +xref: wikipedia.en:Prephenic_acid {source="wikipedia.en"} is_a: CHEBI:36145 ! oxo dicarboxylic acid -relationship: is_conjugate_acid_of CHEBI:29934 ! (1s,4s)-prephenate(2-) -relationship: is_conjugate_acid_of CHEBI:57852 ! prephenate(2-) relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:29934 ! is protonated form of (1s,4s)-prephenate(2-) +relationship: RO:0018034 CHEBI:57852 ! is protonated form of prephenate(2-) [Term] id: CHEBI:16670 @@ -1953,27 +2015,35 @@ name: peptide alt_id: CHEBI:14753 alt_id: CHEBI:25906 alt_id: CHEBI:7990 -def: "Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from alpha-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc." [] -subset: 3_STAR -synonym: "Peptid" RELATED [ChEBI] -synonym: "Peptide" EXACT [KEGG_COMPOUND] -synonym: "peptides" EXACT IUPAC_NAME [IUPAC] -synonym: "peptido" RELATED [ChEBI] -synonym: "peptidos" RELATED [ChEBI] -xref: KEGG:C00012 +def: "Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from α-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc." [] +subset: 3:STAR +synonym: "Peptid" RELATED [chebi] +synonym: "Peptide" RELATED [kegg.compound] +synonym: "peptides" EXACT IUPAC:NAME [IUPAC] +synonym: "peptides" RELATED IUPAC:NAME [iupac] +synonym: "peptido" RELATED [chebi] +synonym: "peptidos" RELATED [chebi] +xref: kegg.compound:C00012 {source="kegg.compound"} is_a: CHEBI:37622 ! carboxamide is_a: CHEBI:50047 ! organic amino compound relationship: has_part CHEBI:33708 ! amino-acid residue -relationship: is_tautomer_of CHEBI:60466 ! peptide zwitterion +relationship: RO:0018036 CHEBI:60466 ! is tautomer of peptide zwitterion [Term] id: CHEBI:166902 name: noradrenaline(1+) -subset: 2_STAR -synonym: "noradrenaline" RELATED [UniProt] +def: "An organic cation that is the conjugate acid of noradrenaline, obtained by protonation of the primary amino group; major species at pH 7.3." [] +subset: 3:STAR +synonym: "2-(3,4-dihydroxyphenyl)-2-hydroxyethan-1-aminium" RELATED [iupac] +synonym: "2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "noradrenaline" RELATED [uniprot_ft] +synonym: "noradrenaline cation" RELATED [chebi] +synonym: "norepinephrine cation" RELATED [chebi] +synonym: "norepinephrine(1+)" RELATED [chebi] is_a: CHEBI:25697 ! organic cation is_a: CHEBI:35274 ! ammonium ion derivative -relationship: is_conjugate_acid_of CHEBI:33569 ! noradrenaline +relationship: RO:0018034 CHEBI:33569 ! is protonated form of noradrenaline [Term] id: CHEBI:16701 @@ -1982,12 +2052,12 @@ alt_id: CHEBI:14674 alt_id: CHEBI:25603 alt_id: CHEBI:7650 def: "A ribosyl or deoxyribosyl derivative of a pyrimidine or purine base in which C-5 of the ribose ring is mono-, di-, tri- or tetra-phosphorylated." [] -subset: 3_STAR -synonym: "Nucleoside 5'-phosphate" EXACT [KEGG_COMPOUND] -synonym: "nucleoside 5'-phosphates" RELATED [ChEBI] -xref: KEGG:C01117 +subset: 3:STAR +synonym: "Nucleoside 5'-phosphate" RELATED [kegg.compound] +synonym: "nucleoside 5'-phosphates" RELATED [chebi] +xref: kegg.compound:C01117 {source="kegg.compound"} is_a: CHEBI:29075 ! mononucleotide -relationship: is_conjugate_acid_of CHEBI:57867 ! nucleoside 5'-phosphate dianion +relationship: RO:0018034 CHEBI:57867 ! is protonated form of nucleoside 5'-phosphate dianion [Term] id: CHEBI:16708 @@ -1997,43 +2067,44 @@ alt_id: CHEBI:22236 alt_id: CHEBI:2470 alt_id: CHEBI:40579 def: "The parent compound of the 6-aminopurines, composed of a purine having an amino group at C-6." [] -subset: 3_STAR -synonym: "6-Aminopurine" RELATED [KEGG_COMPOUND] -synonym: "9H-purin-6-amine" EXACT IUPAC_NAME [IUPAC] -synonym: "A" RELATED [ChEBI] -synonym: "Ade" RELATED [CBN] -synonym: "Adenin" RELATED [NIST_Chemistry_WebBook] -synonym: "ADENINE" EXACT [PDBeChem] -synonym: "Adenine" EXACT [KEGG_COMPOUND] -synonym: "adenine" EXACT [UniProt] -xref: CAS:73-24-5 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:89 {source="DrugCentral"} -xref: DrugBank:DB00173 -xref: Gmelin:3903 {source="Gmelin"} -xref: HMDB:HMDB0000034 -xref: KEGG:C00147 -xref: KEGG:D00034 -xref: KNApSAcK:C00001490 -xref: MetaCyc:ADENINE -xref: PDBeChem:ADE -xref: PMID:11985597 {source="Europe PMC"} -xref: PMID:12829005 {source="Europe PMC"} -xref: PMID:12951489 {source="Europe PMC"} -xref: PMID:15063338 {source="Europe PMC"} -xref: PMID:15715490 {source="Europe PMC"} -xref: PMID:17439666 {source="Europe PMC"} -xref: PMID:8070089 {source="Europe PMC"} -xref: Reaxys:608603 {source="Reaxys"} -xref: Wikipedia:Adenine +subset: 3:STAR +synonym: "6-Aminopurine" RELATED [kegg.compound] +synonym: "9H-purin-6-amine" EXACT IUPAC:NAME [IUPAC] +synonym: "9H-purin-6-amine" RELATED IUPAC:NAME [iupac] +synonym: "A" RELATED [chebi] +synonym: "Ade" RELATED [iubmb] +synonym: "Adenin" RELATED [nist] +synonym: "ADENINE" RELATED [pdb-ccd] +synonym: "Adenine" RELATED [kegg.compound] +synonym: "adenine" RELATED [uniprot_ft] +xref: cas:73-24-5 {source="cas"} +xref: drugbank:DB00173 {source="drugbank"} +xref: drugcentral:89 {source="drugcentral"} +xref: gmelin:3903 {source="gmelin"} +xref: hmdb:HMDB0000034 {source="hmdb"} +xref: kegg.compound:C00147 {source="kegg.compound"} +xref: kegg.drug:D00034 {source="kegg.drug"} +xref: knapsack:C00001490 {source="knapsack"} +xref: metacyc.compound:ADENINE {source="metacyc.compound"} +xref: pdb-ccd:ADE {source="pdb-ccd"} +xref: pubmed:11985597 {source="pubmed"} +xref: pubmed:12829005 {source="pubmed"} +xref: pubmed:12951489 {source="pubmed"} +xref: pubmed:15063338 {source="pubmed"} +xref: pubmed:15715490 {source="pubmed"} +xref: pubmed:17439666 {source="pubmed"} +xref: pubmed:8070089 {source="pubmed"} +xref: reaxys:608603 {source="reaxys"} +xref: wikipedia.en:Adenine {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:20706 ! 6-aminopurines is_a: CHEBI:26386 ! purine nucleobase -relationship: has_parent_hydride CHEBI:35589 ! 9H-purine relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:83056 ! has role Daphnia magna metabolite +relationship: RO:0018040 CHEBI:35589 ! has parent hydride 9H-purine [Term] id: CHEBI:16716 @@ -2042,51 +2113,54 @@ alt_id: CHEBI:13876 alt_id: CHEBI:22703 alt_id: CHEBI:3025 alt_id: CHEBI:41187 -def: "A six-carbon aromatic annulene in which each carbon atom donates one of its two 2p electrons into a delocalised pi system. A toxic, flammable liquid byproduct of coal distillation, it is used as an industrial solvent. Benzene is a carcinogen that also damages bone marrow and the central nervous system." [] -subset: 3_STAR -synonym: "[6]annulene" RELATED [NIST_Chemistry_WebBook] -synonym: "Benzen" RELATED [IUPAC] +def: "A six-carbon aromatic annulene in which each carbon atom donates one of its two 2p electrons into a delocalised π system. A toxic, flammable liquid byproduct of coal distillation, it is used as an industrial solvent. Benzene is a carcinogen that also damages bone marrow and the central nervous system." [] +subset: 3:STAR +synonym: "[6]annulene" RELATED [nist] +synonym: "Benzen" RELATED [iupac] synonym: "BENZENE" EXACT [PDBeChem] +synonym: "BENZENE" RELATED [pdb-ccd] synonym: "Benzene" EXACT [KEGG_COMPOUND] -synonym: "benzene" EXACT IUPAC_NAME [ChEBI, IUPAC, UniProt] -synonym: "Benzine" RELATED [UM-BBD] -synonym: "Benzol" RELATED [ChemIDplus] -synonym: "benzole" RELATED [NIST_Chemistry_WebBook] -synonym: "Bicarburet of hydrogen" RELATED [ChemIDplus] -synonym: "Coal naphtha" RELATED [ChemIDplus] -synonym: "cyclohexatriene" RELATED [UM-BBD] -synonym: "Mineral naphtha" RELATED [ChemIDplus] -synonym: "Phene" RELATED [ChemIDplus] -synonym: "phenyl hydride" RELATED [UM-BBD] -synonym: "Pyrobenzol" RELATED [ChemIDplus] -synonym: "Pyrobenzole" RELATED [ChemIDplus] -xref: CAS:71-43-2 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Gmelin:1671 {source="Gmelin"} -xref: HMDB:HMDB0001505 -xref: KEGG:C01407 -xref: PDBeChem:BNZ -xref: PMID:11684179 {source="Europe PMC"} -xref: PMID:11993966 {source="Europe PMC"} -xref: PMID:12857942 {source="Europe PMC"} -xref: PMID:14677922 {source="Europe PMC"} -xref: PMID:15468289 {source="Europe PMC"} -xref: PMID:15935818 {source="Europe PMC"} -xref: PMID:16161967 {source="Europe PMC"} -xref: PMID:17373369 {source="Europe PMC"} -xref: PMID:18072742 {source="Europe PMC"} -xref: PMID:18407866 {source="Europe PMC"} -xref: PMID:18409691 {source="Europe PMC"} -xref: PMID:18836923 {source="Europe PMC"} -xref: PMID:19228219 {source="Europe PMC"} -xref: PMID:21325737 {source="Europe PMC"} -xref: PMID:23088855 {source="Europe PMC"} -xref: PMID:23222815 {source="Europe PMC"} -xref: PMID:23534829 {source="Europe PMC"} -xref: PMID:6353911 {source="Europe PMC"} -xref: PMID:8124204 {source="Europe PMC"} -xref: Reaxys:969212 {source="Reaxys"} -xref: UM-BBD_compID:c0142 {source="UM-BBD"} -xref: Wikipedia:Benzene +synonym: "Benzene" RELATED [kegg.compound] +synonym: "benzene" EXACT IUPAC:NAME [IUPAC] +synonym: "benzene" RELATED IUPAC:NAME [chebi, iupac, uniprot_ft] +synonym: "Benzine" RELATED [umbbd.compound] +synonym: "Benzol" RELATED [chemidplus] +synonym: "benzole" RELATED [nist] +synonym: "Bicarburet of hydrogen" RELATED [chemidplus] +synonym: "Coal naphtha" RELATED [chemidplus] +synonym: "cyclohexatriene" RELATED [umbbd.compound] +synonym: "Mineral naphtha" RELATED [chemidplus] +synonym: "Phene" RELATED [chemidplus] +synonym: "phenyl hydride" RELATED [umbbd.compound] +synonym: "Pyrobenzol" RELATED [chemidplus] +synonym: "Pyrobenzole" RELATED [chemidplus] +xref: cas:71-43-2 {source="cas"} +xref: gmelin:1671 {source="gmelin"} +xref: hmdb:HMDB0001505 {source="hmdb"} +xref: kegg.compound:C01407 {source="kegg.compound"} +xref: pdb-ccd:BNZ {source="pdb-ccd"} +xref: pubmed:11684179 {source="pubmed"} +xref: pubmed:11993966 {source="pubmed"} +xref: pubmed:12857942 {source="pubmed"} +xref: pubmed:14677922 {source="pubmed"} +xref: pubmed:15468289 {source="pubmed"} +xref: pubmed:15935818 {source="pubmed"} +xref: pubmed:16161967 {source="pubmed"} +xref: pubmed:17373369 {source="pubmed"} +xref: pubmed:18072742 {source="pubmed"} +xref: pubmed:18407866 {source="pubmed"} +xref: pubmed:18409691 {source="pubmed"} +xref: pubmed:18836923 {source="pubmed"} +xref: pubmed:19228219 {source="pubmed"} +xref: pubmed:21325737 {source="pubmed"} +xref: pubmed:23088855 {source="pubmed"} +xref: pubmed:23222815 {source="pubmed"} +xref: pubmed:23534829 {source="pubmed"} +xref: pubmed:6353911 {source="pubmed"} +xref: pubmed:8124204 {source="pubmed"} +xref: reaxys:969212 {source="reaxys"} +xref: umbbd.compound:c0142 {source="umbbd.compound"} +xref: wikipedia.en:Benzene {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:134179 ! volatile organic compound is_a: CHEBI:22712 ! benzenes @@ -2099,12 +2173,12 @@ relationship: RO:0000087 CHEBI:78298 ! has role environmental contaminant id: CHEBI:167164 name: mineral nutrient def: "A mineral that is an inorganic nutrient which must be ingested and absorbed in adequate amounts to satisfy a wide range of essential metabolic and/or structural functions in the human body." [] -subset: 3_STAR -synonym: "mineral nutrient" EXACT [ChEBI] -synonym: "mineral nutrients" RELATED [ChEBI] -synonym: "nutrient mineral" RELATED [ChEBI] -synonym: "nutrient minerals" RELATED [ChEBI] -xref: Wikipedia:Mineral_(nutrient) +subset: 3:STAR +synonym: "mineral nutrient" RELATED [chebi] +synonym: "mineral nutrients" RELATED [chebi] +synonym: "nutrient mineral" RELATED [chebi] +synonym: "nutrient minerals" RELATED [chebi] +xref: wikipedia.en:Mineral_(nutrient) {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:46662 ! mineral relationship: RO:0000087 CHEBI:33284 ! has role nutrient @@ -2116,22 +2190,22 @@ alt_id: CHEBI:12909 alt_id: CHEBI:13625 alt_id: CHEBI:20906 alt_id: CHEBI:4097 -subset: 3_STAR -synonym: "D-alpha-amino acid" EXACT [ChEBI] -synonym: "D-alpha-amino acids" EXACT IUPAC_NAME [IUPAC] -synonym: "D-alpha-amino acids" RELATED [ChEBI] -synonym: "D-Amino acid" RELATED [KEGG_COMPOUND] -xref: KEGG:C00405 +subset: 3:STAR +synonym: "D-alpha-amino acid" RELATED [chebi] +synonym: "D-alpha-amino acids" EXACT IUPAC:NAME [IUPAC] +synonym: "D-alpha-amino acids" RELATED IUPAC:NAME [chebi, iupac] +synonym: "D-Amino acid" RELATED [kegg.compound] +xref: kegg.compound:C00405 {source="kegg.compound"} is_a: CHEBI:83925 ! non-proteinogenic alpha-amino acid -relationship: is_conjugate_acid_of CHEBI:60895 ! D-alpha-amino acid anion -relationship: is_tautomer_of CHEBI:59871 ! D-alpha-amino acid zwitterion +relationship: RO:0018034 CHEBI:60895 ! is protonated form of D-alpha-amino acid anion +relationship: RO:0018036 CHEBI:59871 ! is tautomer of D-alpha-amino acid zwitterion [Term] id: CHEBI:167559 name: glycan -def: "Any oligosaccharide, polysaccharide or their derivatives consisting of monosaccharides or monosaccharide derivatives linked by glycosidic bonds. See also http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001." [] -subset: 3_STAR -synonym: "glycans" RELATED [ChEBI] +def: "Any oligosaccharide, polysaccharide or their derivatives consisting of monosaccharides or monosaccharide derivatives linked by glycosidic bonds. See also http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001." [] +subset: 3:STAR +synonym: "glycans" RELATED [chebi] is_a: CHEBI:78616 ! carbohydrates and carbohydrate derivatives [Term] @@ -2142,30 +2216,31 @@ alt_id: CHEBI:22244 alt_id: CHEBI:2342 alt_id: CHEBI:40553 def: "A purine ribonucleoside 5'-diphosphate having adenine as the nucleobase." [] -subset: 3_STAR -synonym: "5'-adenylphosphoric acid" RELATED [ChemIDplus] -synonym: "adenosine 5'-(trihydrogen diphosphate)" EXACT IUPAC_NAME [IUPAC] -synonym: "Adenosine 5'-diphosphate" RELATED [KEGG_COMPOUND] -synonym: "ADENOSINE-5'-DIPHOSPHATE" RELATED [PDBeChem] -synonym: "ADP" EXACT [KEGG_COMPOUND] -synonym: "H3adp" RELATED [IUPAC] -xref: CAS:20398-34-9 {source="KEGG COMPOUND"} -xref: CAS:58-64-0 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: COMe:MOL000173 -xref: DrugBank:DB03431 -xref: Gmelin:88452 {source="Gmelin"} -xref: KEGG:C00008 -xref: KEGG:G11113 -xref: KNApSAcK:C00019353 -xref: PDBeChem:ADP -xref: PMID:16295522 {source="Europe PMC"} -xref: Reaxys:67722 {source="Reaxys"} +subset: 3:STAR +synonym: "5'-adenylphosphoric acid" RELATED [chemidplus] +synonym: "adenosine 5'-(trihydrogen diphosphate)" EXACT IUPAC:NAME [IUPAC] +synonym: "adenosine 5'-(trihydrogen diphosphate)" RELATED IUPAC:NAME [iupac] +synonym: "Adenosine 5'-diphosphate" EXACT [KEGG_COMPOUND] +synonym: "Adenosine 5'-diphosphate" RELATED [kegg.compound] +synonym: "ADENOSINE-5'-DIPHOSPHATE" RELATED [pdb-ccd] +synonym: "ADP" RELATED [kegg.compound] +synonym: "H3adp" RELATED [iupac] +xref: cas:20398-34-9 {source="cas"} +xref: cas:58-64-0 {source="cas"} +xref: drugbank:DB03431 {source="drugbank"} +xref: gmelin:88452 {source="gmelin"} +xref: kegg.compound:C00008 {source="kegg.compound"} +xref: kegg.glycan:G11113 {source="kegg.glycan"} +xref: knapsack:C00019353 {source="knapsack"} +xref: pdb-ccd:ADP {source="pdb-ccd"} +xref: pubmed:16295522 {source="pubmed"} +xref: reaxys:67722 {source="reaxys"} is_a: CHEBI:37038 ! purine ribonucleoside 5'-diphosphate is_a: CHEBI:37096 ! adenosine 5'-phosphate -relationship: is_conjugate_acid_of CHEBI:456216 ! ADP(3-) -relationship: is_conjugate_acid_of CHEBI:87518 ! ADP(2-) relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018034 CHEBI:456216 ! is protonated form of ADP(3-) +relationship: RO:0018034 CHEBI:87518 ! is protonated form of ADP(2-) [Term] id: CHEBI:16765 @@ -2175,35 +2250,37 @@ alt_id: CHEBI:27161 alt_id: CHEBI:46157 alt_id: CHEBI:9767 def: "An aminoalkylindole consisting of indole having a 2-aminoethyl group at the 3-position." [] -subset: 3_STAR -synonym: "1H-indole-3-ethanamine" RELATED [NIST_Chemistry_WebBook] -synonym: "2-(1H-INDOL-3-YL)ETHANAMINE" RELATED [PDBeChem] -synonym: "2-(1H-indol-3-yl)ethanamine" EXACT IUPAC_NAME [IUPAC] -synonym: "2-(3-indolyl)ethylamine" RELATED [ChemIDplus] -synonym: "3-(2-Aminoethyl)indole" RELATED [KEGG_COMPOUND] -synonym: "Tryptamine" EXACT [KEGG_COMPOUND] -xref: CAS:61-54-1 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB08653 -xref: Gmelin:603448 {source="Gmelin"} -xref: HMDB:HMDB0000303 -xref: KEGG:C00398 -xref: KNApSAcK:C00001434 -xref: MetaCyc:TRYPTAMINE -xref: PDBeChem:TSS -xref: PMID:16126914 {source="Europe PMC"} -xref: PMID:22770225 {source="Europe PMC"} -xref: PMID:24345948 {source="Europe PMC"} -xref: PMID:24558969 {source="Europe PMC"} -xref: Reaxys:125513 {source="Reaxys"} -xref: Wikipedia:Tryptamine +subset: 3:STAR +synonym: "1H-indole-3-ethanamine" RELATED [nist] +synonym: "2-(1H-INDOL-3-YL)ETHANAMINE" EXACT [PDBeChem] +synonym: "2-(1H-INDOL-3-YL)ETHANAMINE" RELATED [pdb-ccd] +synonym: "2-(1H-indol-3-yl)ethanamine" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(1H-indol-3-yl)ethanamine" RELATED IUPAC:NAME [iupac] +synonym: "2-(3-indolyl)ethylamine" RELATED [chemidplus] +synonym: "3-(2-Aminoethyl)indole" RELATED [kegg.compound] +synonym: "Tryptamine" RELATED [kegg.compound] +xref: cas:61-54-1 {source="cas"} +xref: drugbank:DB08653 {source="drugbank"} +xref: gmelin:603448 {source="gmelin"} +xref: hmdb:HMDB0000303 {source="hmdb"} +xref: kegg.compound:C00398 {source="kegg.compound"} +xref: knapsack:C00001434 {source="knapsack"} +xref: metacyc.compound:TRYPTAMINE {source="metacyc.compound"} +xref: pdb-ccd:TSS {source="pdb-ccd"} +xref: pubmed:16126914 {source="pubmed"} +xref: pubmed:22770225 {source="pubmed"} +xref: pubmed:24345948 {source="pubmed"} +xref: pubmed:24558969 {source="pubmed"} +xref: reaxys:125513 {source="reaxys"} +xref: wikipedia.en:Tryptamine {source="wikipedia.en"} is_a: CHEBI:27162 ! tryptamines is_a: CHEBI:38631 ! aminoalkylindole is_a: CHEBI:38958 ! indole alkaloid is_a: CHEBI:64365 ! aralkylamino compound -relationship: is_conjugate_base_of CHEBI:57887 ! tryptaminium relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:57887 ! is deprotonated form of tryptaminium [Term] id: CHEBI:16796 @@ -2211,34 +2288,34 @@ name: melatonin alt_id: CHEBI:14577 alt_id: CHEBI:25180 alt_id: CHEBI:6730 -def: "A member of the class of acetamides that is acetamide in which one of the hydrogens attached to the nitrogen atom is replaced by a 2-(5-methoxy-1H-indol-3-yl)ethyl group. It is a hormone secreted by the pineal gland in humans." [] -subset: 3_STAR -synonym: "5-methoxy-N-acetyltryptamine" RELATED [ChemIDplus] -synonym: "Melatonin" EXACT [KEGG_COMPOUND] -synonym: "melatonin" EXACT [UniProt] -synonym: "melatonine" RELATED [ChEBI] -synonym: "N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide" EXACT IUPAC_NAME [IUPAC] -synonym: "N-[2-(5-methoxyindol-3-yl)ethyl]acetamide" RELATED [NIST_Chemistry_WebBook] -synonym: "N-Acetyl-5-methoxytryptamine" RELATED [KEGG_COMPOUND] -xref: CAS:73-31-4 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:1672 {source="DrugCentral"} -xref: DrugBank:DB01065 -xref: HMDB:HMDB0001389 -xref: KEGG:C01598 -xref: KEGG:D08170 -xref: LINCS:LSM-4779 -xref: MetaCyc:N-ACETYL-5-METHOXY-TRYPTAMINE -xref: PDBeChem:ML1 -xref: PMID:16678784 {source="Europe PMC"} -xref: PMID:18212404 {source="Europe PMC"} -xref: PMID:18485664 {source="Europe PMC"} -xref: PMID:8290600 {source="Europe PMC"} -xref: Reaxys:205542 {source="Reaxys"} -xref: Wikipedia:Melatonin +def: "A member of the class of acetamides that is acetamide in which one of the hydrogens attached to the nitrogen atom is replaced by a 2-(5-methoxy-1H-indol-3-yl)ethyl group. It is a hormone secreted by the pineal gland in humans." [] +subset: 3:STAR +synonym: "5-methoxy-N-acetyltryptamine" RELATED [chemidplus] +synonym: "Melatonin" RELATED [kegg.compound] +synonym: "melatonin" RELATED [uniprot_ft] +synonym: "melatonine" RELATED [chebi] +synonym: "N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide" EXACT IUPAC:NAME [IUPAC] +synonym: "N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide" RELATED IUPAC:NAME [iupac] +synonym: "N-[2-(5-methoxyindol-3-yl)ethyl]acetamide" RELATED [nist] +synonym: "N-Acetyl-5-methoxytryptamine" RELATED [kegg.compound] +xref: cas:73-31-4 {source="cas"} +xref: drugbank:DB01065 {source="drugbank"} +xref: drugcentral:1672 {source="drugcentral"} +xref: hmdb:HMDB0001389 {source="hmdb"} +xref: kegg.compound:C01598 {source="kegg.compound"} +xref: kegg.drug:D08170 {source="kegg.drug"} +xref: lincs.smallmolecule:LSM-4779 {source="lincs.smallmolecule"} +xref: metacyc.compound:N-ACETYL-5-METHOXY-TRYPTAMINE {source="metacyc.compound"} +xref: pdb-ccd:ML1 {source="pdb-ccd"} +xref: pubmed:16678784 {source="pubmed"} +xref: pubmed:18212404 {source="pubmed"} +xref: pubmed:18485664 {source="pubmed"} +xref: pubmed:8290600 {source="pubmed"} +xref: reaxys:205542 {source="reaxys"} +xref: wikipedia.en:Melatonin {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:22160 ! acetamides is_a: CHEBI:27162 ! tryptamines -relationship: has_functional_parent CHEBI:16765 ! tryptamine relationship: RO:0000087 CHEBI:176497 ! has role geroprotector relationship: RO:0000087 CHEBI:24621 ! has role hormone relationship: RO:0000087 CHEBI:35488 ! has role central nervous system depressant @@ -2247,6 +2324,7 @@ relationship: RO:0000087 CHEBI:48578 ! has role radical scavenger relationship: RO:0000087 CHEBI:50847 ! has role immunological adjuvant relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018038 CHEBI:16765 ! has functional parent tryptamine [Term] id: CHEBI:16862 @@ -2254,18 +2332,19 @@ name: nucleoside 5'-diphosphate alt_id: CHEBI:13401 alt_id: CHEBI:13662 alt_id: CHEBI:14675 +alt_id: CHEBI:18181 alt_id: CHEBI:25606 alt_id: CHEBI:7428 alt_id: CHEBI:7652 -subset: 3_STAR -synonym: "NDP" RELATED [KEGG_COMPOUND] -synonym: "Nucleoside diphosphate" RELATED [KEGG_COMPOUND] -synonym: "nucleoside diphosphates" RELATED [ChEBI] -xref: KEGG:C00454 +subset: 3:STAR +synonym: "NDP" RELATED [kegg.compound] +synonym: "Nucleoside diphosphate" RELATED [kegg.compound] +synonym: "nucleoside diphosphates" RELATED [chebi] +xref: kegg.compound:C00454 {source="kegg.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25608 ! nucleoside phosphate -relationship: is_conjugate_acid_of CHEBI:57930 ! nucleoside 5'-diphosphate(3-) relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018034 CHEBI:57930 ! is protonated form of nucleoside 5'-diphosphate(3-) [Term] id: CHEBI:16865 @@ -2274,71 +2353,74 @@ alt_id: CHEBI:1786 alt_id: CHEBI:193777 alt_id: CHEBI:20318 alt_id: CHEBI:40483 -def: "A gamma-amino acid that is butanoic acid with the amino substituent located at C-4." [] -subset: 3_STAR -synonym: "4-Aminobutanoic acid" RELATED [KEGG_COMPOUND] -synonym: "4-aminobutanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "4-aminobutanoic acid" RELATED [ChEBI] -synonym: "4-Aminobutyric acid" RELATED [KEGG_COMPOUND] -synonym: "4-aminobutyric acid" RELATED [ChEBI] -synonym: "4Abu" RELATED [ChEBI] -synonym: "GABA" RELATED [IUPHAR, KEGG_COMPOUND] -synonym: "GAMMA-AMINO-BUTANOIC ACID" RELATED [PDBeChem] -synonym: "gamma-amino-n-butyric acid" RELATED [NIST_Chemistry_WebBook] -synonym: "gamma-aminobutanoic acid" RELATED [NIST_Chemistry_WebBook] -synonym: "gamma-Aminobuttersaeure" RELATED [NIST_Chemistry_WebBook] -synonym: "gamma-Aminobutyric acid" EXACT [KEGG_COMPOUND] -synonym: "gamma-aminobutyric acid" EXACT [NIST_Chemistry_WebBook] -synonym: "omega-aminobutyric acid" RELATED [NIST_Chemistry_WebBook] -synonym: "piperidic acid" RELATED [ChemIDplus] -synonym: "piperidinic acid" RELATED [ChemIDplus] -xref: BPDB:2298 -xref: CAS:56-12-2 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:1262 {source="DrugCentral"} -xref: DrugBank:DB02530 -xref: Gmelin:49775 {source="Gmelin"} -xref: HMDB:HMDB0000112 -xref: KEGG:C00334 -xref: KEGG:D00058 -xref: KNApSAcK:C00001337 -xref: LIPID_MAPS_instance:LMFA01100039 {source="LIPID MAPS"} -xref: MetaCyc:4-AMINO-BUTYRATE -xref: PDBeChem:ABU -xref: PMID:10630630 {source="Europe PMC"} -xref: PMID:10930630 {source="Europe PMC"} -xref: PMID:16276116 {source="Europe PMC"} -xref: PMID:21614609 {source="Europe PMC"} -xref: PMID:22770225 {source="Europe PMC"} -xref: Reaxys:906818 {source="Reaxys"} -xref: Wikipedia:Gamma-Aminobutyric_acid +def: "A γ-amino acid that is butanoic acid with the amino substituent located at C-4." [] +subset: 3:STAR +synonym: "4-Aminobutanoic acid" EXACT [KEGG_COMPOUND] +synonym: "4-Aminobutanoic acid" RELATED [kegg.compound] +synonym: "4-aminobutanoic acid" EXACT IUPAC:NAME [ChEBI, IUPAC] +synonym: "4-aminobutanoic acid" RELATED IUPAC:NAME [chebi, iupac] +synonym: "4-Aminobutyric acid" RELATED [kegg.compound] +synonym: "4-aminobutyric acid" RELATED [chebi] +synonym: "4Abu" RELATED [chebi] +synonym: "GABA" RELATED [iuphar, kegg.compound] +synonym: "GAMMA-AMINO-BUTANOIC ACID" RELATED [pdb-ccd] +synonym: "gamma-amino-n-butyric acid" RELATED [nist] +synonym: "gamma-aminobutanoic acid" RELATED [nist] +synonym: "gamma-Aminobuttersaeure" RELATED [nist] +synonym: "gamma-Aminobutyric acid" RELATED [kegg.compound] +synonym: "gamma-aminobutyric acid" RELATED [nist] +synonym: "omega-aminobutyric acid" RELATED [nist] +synonym: "piperidic acid" RELATED [chemidplus] +synonym: "piperidinic acid" RELATED [chemidplus] +xref: bpdb:2298 {source="bpdb"} +xref: cas:56-12-2 {source="cas"} +xref: drugbank:DB02530 {source="drugbank"} +xref: drugcentral:1262 {source="drugcentral"} +xref: gmelin:49775 {source="gmelin"} +xref: hmdb:HMDB0000112 {source="hmdb"} +xref: kegg.compound:C00334 {source="kegg.compound"} +xref: kegg.drug:D00058 {source="kegg.drug"} +xref: knapsack:C00001337 {source="knapsack"} +xref: lipidmaps:LMFA01100039 {source="lipidmaps"} +xref: metacyc.compound:4-AMINO-BUTYRATE {source="metacyc.compound"} +xref: pdb-ccd:ABU {source="pdb-ccd"} +xref: pubmed:10630630 {source="pubmed"} +xref: pubmed:10930630 {source="pubmed"} +xref: pubmed:16276116 {source="pubmed"} +xref: pubmed:21614609 {source="pubmed"} +xref: pubmed:22770225 {source="pubmed"} +xref: reaxys:906818 {source="reaxys"} +xref: wikipedia.en:Gamma-Aminobutyric_acid {source="wikipedia.en"} is_a: CHEBI:25384 ! monocarboxylic acid is_a: CHEBI:33707 ! gamma-amino acid -relationship: has_functional_parent CHEBI:30772 ! butyric acid -relationship: is_conjugate_acid_of CHEBI:30566 ! gamma-aminobutyrate -relationship: is_tautomer_of CHEBI:59888 ! gamma-aminobutyric acid zwitterion relationship: RO:0000087 CHEBI:25512 ! has role neurotransmitter relationship: RO:0000087 CHEBI:62488 ! has role signalling molecule relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:30566 ! is protonated form of gamma-aminobutyrate +relationship: RO:0018036 CHEBI:59888 ! is tautomer of gamma-aminobutyric acid zwitterion +relationship: RO:0018038 CHEBI:30772 ! has functional parent butyric acid [Term] id: CHEBI:16988 name: D-ribose alt_id: CHEBI:13011 alt_id: CHEBI:21078 -def: "A ribose in which the chiral carbon atom furthest away from the aldehyde group (C4') has the same configuration as in D-glyceraldehyde." [] -subset: 3_STAR -synonym: "D-Rib" RELATED [JCBN] -synonym: "D-ribo-pentose" EXACT IUPAC_NAME [IUPAC] -synonym: "D-ribose" EXACT IUPAC_NAME [IUPAC] -xref: DrugBank:DB01936 -xref: PMID:24404872 {source="Europe PMC"} -xref: PMID:24752650 {source="Europe PMC"} +def: "A ribose in which the chiral carbon atom furthest away from the aldehyde group (C4') has the same configuration as in D-glyceraldehyde." [] +subset: 3:STAR +synonym: "D-Rib" RELATED [jcbn] +synonym: "D-ribo-pentose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-ribo-pentose" RELATED IUPAC:NAME [iupac] +synonym: "D-ribose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-ribose" RELATED IUPAC:NAME [iupac] +xref: drugbank:DB01936 {source="drugbank"} +xref: pubmed:24404872 {source="pubmed"} +xref: pubmed:24752650 {source="pubmed"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33942 ! ribose -relationship: is_enantiomer_of CHEBI:46997 ! L-ribose relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018039 CHEBI:46997 ! is enantiomer of L-ribose [Term] id: CHEBI:16990 @@ -2347,39 +2429,42 @@ alt_id: CHEBI:13898 alt_id: CHEBI:22870 alt_id: CHEBI:3099 def: "A member of the class of biladienes that is a linear tetrapyrrole with the dipyrrole units being of both exovinyl and endovinyl type. A product of heme degradation, it is produced in the reticuloendothelial system by the reduction of biliverdin and transported to the liver as a complex with serum albumin." [] -subset: 3_STAR -synonym: "1,10,19,22,23,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinylbiline-8,12-dipropionic acid" RELATED [ChemIDplus] -synonym: "2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropanoic acid" RELATED [ChemIDplus] -synonym: "2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoic acid" RELATED [IUPAC] -synonym: "3,18-diethenyl-2,7,13,17-tetramethyl-1,19-dioxo-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-3,18-divinylbiladiene-ac-1,19(21H,24H)-dione" RELATED [JCBN] -synonym: "Bilirubin" RELATED [KEGG_COMPOUND] -synonym: "bilirubin" EXACT IUPAC_NAME [IUPAC] -synonym: "bilirubin(Z,Z)" RELATED [ChEBI] -synonym: "bilirubin-IXalpha" RELATED [ChEBI] -xref: CAS:635-65-4 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Gmelin:411033 {source="Gmelin"} -xref: HMDB:HMDB0000054 -xref: KEGG:C00486 -xref: KNApSAcK:C00029828 -xref: MetaCyc:BILIRUBIN -xref: PDBeChem:BLR -xref: PMID:12799017 {source="Europe PMC"} -xref: PMID:18442622 {source="Europe PMC"} -xref: PMID:23763371 {source="Europe PMC"} -xref: PMID:23768684 {source="Europe PMC"} -xref: PMID:30224965 {source="Europe PMC"} -xref: PMID:8605219 {source="Europe PMC"} -xref: PMID:9587403 {source="Europe PMC"} -xref: Reaxys:74376 {source="Reaxys"} -xref: Wikipedia:Bilirubin +subset: 3:STAR +synonym: "1,10,19,22,23,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinylbiline-8,12-dipropionic acid" RELATED [chemidplus] +synonym: "2,17-diethenyl-1,10,19,22,23,24-hexahydro-3,7,13,18-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropanoic acid" RELATED [chemidplus] +synonym: "2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoic acid" RELATED [iupac] +synonym: "3,18-diethenyl-2,7,13,17-tetramethyl-1,19-dioxo-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "3,18-diethenyl-2,7,13,17-tetramethyl-1,19-dioxo-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoic acid" RELATED IUPAC:NAME [iupac] +synonym: "8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-3,18-divinylbiladiene-ac-1,19(21H,24H)-dione" RELATED [jcbn] +synonym: "Bilirubin" EXACT [KEGG_COMPOUND] +synonym: "Bilirubin" RELATED [kegg.compound] +synonym: "bilirubin" EXACT IUPAC:NAME [IUPAC] +synonym: "bilirubin" RELATED IUPAC:NAME [iupac] +synonym: "bilirubin(Z,Z)" RELATED [chebi] +synonym: "bilirubin-IXalpha" RELATED [chebi] +xref: cas:635-65-4 {source="cas"} +xref: gmelin:411033 {source="gmelin"} +xref: hmdb:HMDB0000054 {source="hmdb"} +xref: kegg.compound:C00486 {source="kegg.compound"} +xref: knapsack:C00029828 {source="knapsack"} +xref: metacyc.compound:BILIRUBIN {source="metacyc.compound"} +xref: pdb-ccd:BLR {source="pdb-ccd"} +xref: pubmed:12799017 {source="pubmed"} +xref: pubmed:18442622 {source="pubmed"} +xref: pubmed:23763371 {source="pubmed"} +xref: pubmed:23768684 {source="pubmed"} +xref: pubmed:30224965 {source="pubmed"} +xref: pubmed:8605219 {source="pubmed"} +xref: pubmed:9587403 {source="pubmed"} +xref: reaxys:74376 {source="reaxys"} +xref: wikipedia.en:Bilirubin {source="wikipedia.en"} is_a: CHEBI:35692 ! dicarboxylic acid is_a: CHEBI:36735 ! biladienes relationship: has_part CHEBI:142163 ! 24G7 epitope -relationship: is_conjugate_acid_of CHEBI:57977 ! bilirubin(2-) relationship: RO:0000087 CHEBI:22586 ! has role antioxidant relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:57977 ! is protonated form of bilirubin(2-) [Term] id: CHEBI:16991 @@ -2389,22 +2474,22 @@ alt_id: CHEBI:21123 alt_id: CHEBI:33698 alt_id: CHEBI:4291 def: "High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms." [] -subset: 3_STAR -synonym: "(Deoxyribonucleotide)m" RELATED [KEGG_COMPOUND] -synonym: "(Deoxyribonucleotide)n" RELATED [KEGG_COMPOUND] -synonym: "(Deoxyribonucleotide)n+m" RELATED [KEGG_COMPOUND] -synonym: "Deoxyribonucleic acid" EXACT [KEGG_COMPOUND] -synonym: "deoxyribonucleic acids" EXACT IUPAC_NAME [IUPAC] -synonym: "deoxyribonucleic acids" RELATED [ChEBI] -synonym: "Desoxyribonukleinsaeure" RELATED [ChEBI] -synonym: "desoxyribose nucleic acid" RELATED [ChemIDplus] -synonym: "DNA" RELATED [IUPAC, KEGG_COMPOUND, UniProt] -synonym: "DNAn" RELATED [KEGG_COMPOUND] -synonym: "DNAn+1" RELATED [KEGG_COMPOUND] -synonym: "DNS" RELATED [ChEBI] -synonym: "thymus nucleic acid" RELATED [ChEBI] -xref: CAS:9007-49-2 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: KEGG:C00039 +subset: 3:STAR +synonym: "(Deoxyribonucleotide)m" RELATED [kegg.compound] +synonym: "(Deoxyribonucleotide)n" RELATED [kegg.compound] +synonym: "(Deoxyribonucleotide)n+m" RELATED [kegg.compound] +synonym: "Deoxyribonucleic acid" RELATED [kegg.compound] +synonym: "deoxyribonucleic acids" EXACT IUPAC:NAME [IUPAC] +synonym: "deoxyribonucleic acids" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Desoxyribonukleinsaeure" RELATED [chebi] +synonym: "desoxyribose nucleic acid" RELATED [chemidplus] +synonym: "DNA" RELATED [iupac, kegg.compound, uniprot_ft] +synonym: "DNAn" RELATED [kegg.compound] +synonym: "DNAn+1" RELATED [kegg.compound] +synonym: "DNS" RELATED [chebi] +synonym: "thymus nucleic acid" RELATED [chebi] +xref: cas:9007-49-2 {source="cas"} +xref: kegg.compound:C00039 {source="kegg.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33696 ! nucleic acid relationship: has_part CHEBI:33793 ! canonical deoxyribonucleoside residue @@ -2419,35 +2504,39 @@ alt_id: CHEBI:13007 alt_id: CHEBI:21067 alt_id: CHEBI:42207 alt_id: CHEBI:4224 -def: "The D-enantiomer of phenylalanine." [] -subset: 3_STAR -synonym: "(2R)-2-amino-3-phenylpropanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "D-alpha-Amino-beta-phenylpropionic acid" RELATED [KEGG_COMPOUND] -synonym: "D-Phe" RELATED [ChEBI] +def: "The D-enantiomer of phenylalanine." [] +subset: 3:STAR +synonym: "(2R)-2-amino-3-phenylpropanoic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-amino-3-phenylpropanoic acid" RELATED IUPAC:NAME [iupac] +synonym: "D-alpha-Amino-beta-phenylpropionic acid" RELATED [kegg.compound] +synonym: "D-Phe" RELATED [chebi] synonym: "D-PHENYLALANINE" EXACT [PDBeChem] +synonym: "D-PHENYLALANINE" RELATED [pdb-ccd] synonym: "D-Phenylalanine" EXACT [KEGG_COMPOUND] -synonym: "D-phenylalanine" EXACT IUPAC_NAME [IUPAC] -synonym: "DPN" RELATED [PDBeChem] -synonym: "phenylalanine D-form" RELATED [ChemIDplus] -xref: CAS:673-06-3 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: DrugBank:DB02556 -xref: ECMDB:ECMDB20144 -xref: Gmelin:83219 {source="Gmelin"} -xref: KEGG:C02265 -xref: MetaCyc:CPD-216 -xref: PDBeChem:DPN -xref: PMID:22382026 {source="Europe PMC"} -xref: PMID:22397264 {source="Europe PMC"} -xref: PMID:24464217 {source="Europe PMC"} -xref: PMID:7114516 {source="Europe PMC"} -xref: Reaxys:2804068 {source="Reaxys"} -xref: YMDB:YMDB00995 +synonym: "D-Phenylalanine" RELATED [kegg.compound] +synonym: "D-phenylalanine" EXACT IUPAC:NAME [IUPAC] +synonym: "D-phenylalanine" RELATED IUPAC:NAME [iupac] +synonym: "DPN" RELATED [pdb-ccd] +synonym: "phenylalanine D-form" RELATED [chemidplus] +xref: cas:673-06-3 {source="cas"} +xref: drugbank:DB02556 {source="drugbank"} +xref: ecmdb:ECMDB20144 {source="ecmdb"} +xref: gmelin:83219 {source="gmelin"} +xref: kegg.compound:C02265 {source="kegg.compound"} +xref: metacyc.compound:CPD-216 {source="metacyc.compound"} +xref: pdb-ccd:DPN {source="pdb-ccd"} +xref: pubmed:22382026 {source="pubmed"} +xref: pubmed:22397264 {source="pubmed"} +xref: pubmed:24464217 {source="pubmed"} +xref: pubmed:7114516 {source="pubmed"} +xref: reaxys:2804068 {source="reaxys"} +xref: ymdb:YMDB00995 {source="ymdb"} is_a: CHEBI:16733 ! D-alpha-amino acid is_a: CHEBI:28044 ! phenylalanine -relationship: is_conjugate_acid_of CHEBI:32494 ! D-phenylalaninate -relationship: is_conjugate_base_of CHEBI:32495 ! D-phenylalaninium -relationship: is_enantiomer_of CHEBI:17295 ! L-phenylalanine -relationship: is_tautomer_of CHEBI:57981 ! D-phenylalanine zwitterion +relationship: RO:0018033 CHEBI:32495 ! is deprotonated form of D-phenylalaninium +relationship: RO:0018034 CHEBI:32494 ! is protonated form of D-phenylalaninate +relationship: RO:0018036 CHEBI:57981 ! is tautomer of D-phenylalanine zwitterion +relationship: RO:0018039 CHEBI:17295 ! is enantiomer of L-phenylalanine [Term] id: CHEBI:17026 @@ -2455,50 +2544,52 @@ name: progesterone alt_id: CHEBI:14896 alt_id: CHEBI:18798 alt_id: CHEBI:26269 +alt_id: CHEBI:28589 alt_id: CHEBI:439 alt_id: CHEBI:45786 alt_id: CHEBI:8453 -def: "A C21-steroid hormone in which a pregnane skeleton carries oxo substituents at positions 3 and 20 and is unsaturated at C(4)-C(5). As a hormone, it is involved in the female menstrual cycle, pregnancy and embryogenesis of humans and other species." [] -subset: 3_STAR -synonym: "(S)-4-Pregnene-3,20-dione" RELATED [KEGG_COMPOUND] -synonym: "(S)-Pregn-4-en-3,20-dione" RELATED [KEGG_COMPOUND] -synonym: "(S)-Progesterone" RELATED [KEGG_COMPOUND] -synonym: "17alpha-progesterone" RELATED [NIST_Chemistry_WebBook] -synonym: "4-Pregnene-3,20-dione" RELATED [KEGG_COMPOUND] -synonym: "Agolutin" RELATED [NIST_Chemistry_WebBook] -synonym: "Akrolutin" RELATED [ChEBI] -synonym: "corpus luteum hormone" RELATED [ChemIDplus] -synonym: "Crinone" RELATED [ChemIDplus] -synonym: "Delta(4)-pregnene-3,20-dione" RELATED [ChEBI] -synonym: "Gelbkoerperhormon" RELATED [ChEBI] -synonym: "luteohormone" RELATED [ChemIDplus] -synonym: "pregn-4-ene-3,20-dione" EXACT IUPAC_NAME [IUPAC] -synonym: "Progesteron" RELATED [ChEBI] -synonym: "PROGESTERONE" EXACT [PDBeChem] -synonym: "Progesterone" EXACT [KEGG_COMPOUND] -synonym: "progesterone" EXACT [UniProt] -xref: CAS:57-83-0 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:2279 {source="DrugCentral"} -xref: DrugBank:DB00396 -xref: Gmelin:708590 {source="Gmelin"} -xref: HMDB:HMDB0001830 -xref: KEGG:C00410 -xref: KEGG:D00066 -xref: MetaCyc:PROGESTERONE -xref: PDBeChem:STR -xref: PMID:10438974 {source="Europe PMC"} -xref: PMID:9506942 {source="Europe PMC"} -xref: Reaxys:1915950 {source="Reaxys"} -xref: Wikipedia:Progesterone +def: "A C21-steroid hormone in which a pregnane skeleton carries oxo substituents at positions 3 and 20 and is unsaturated at C(4)-C(5). As a hormone, it is involved in the female menstrual cycle, pregnancy and embryogenesis of humans and other species." [] +subset: 3:STAR +synonym: "(S)-4-Pregnene-3,20-dione" RELATED [kegg.compound] +synonym: "(S)-Pregn-4-en-3,20-dione" RELATED [kegg.compound] +synonym: "(S)-Progesterone" RELATED [kegg.compound] +synonym: "17alpha-progesterone" RELATED [nist] +synonym: "4-Pregnene-3,20-dione" RELATED [kegg.compound] +synonym: "Agolutin" RELATED [nist] +synonym: "Akrolutin" RELATED [chebi] +synonym: "corpus luteum hormone" RELATED [chemidplus] +synonym: "Crinone" RELATED [chemidplus] +synonym: "Delta(4)-pregnene-3,20-dione" RELATED [chebi] +synonym: "Gelbkoerperhormon" RELATED [chebi] +synonym: "luteohormone" RELATED [chemidplus] +synonym: "pregn-4-ene-3,20-dione" EXACT IUPAC:NAME [IUPAC] +synonym: "pregn-4-ene-3,20-dione" RELATED IUPAC:NAME [iupac] +synonym: "Progesteron" RELATED [chebi] +synonym: "PROGESTERONE" RELATED [pdb-ccd] +synonym: "Progesterone" RELATED [kegg.compound] +synonym: "progesterone" RELATED [uniprot_ft] +xref: cas:57-83-0 {source="cas"} +xref: drugbank:DB00396 {source="drugbank"} +xref: drugcentral:2279 {source="drugcentral"} +xref: gmelin:708590 {source="gmelin"} +xref: hmdb:HMDB0001830 {source="hmdb"} +xref: kegg.compound:C00410 {source="kegg.compound"} +xref: kegg.drug:D00066 {source="kegg.drug"} +xref: metacyc.compound:PROGESTERONE {source="metacyc.compound"} +xref: pdb-ccd:STR {source="pdb-ccd"} +xref: pubmed:10438974 {source="pubmed"} +xref: pubmed:9506942 {source="pubmed"} +xref: reaxys:1915950 {source="reaxys"} +xref: wikipedia.en:Progesterone {source="wikipedia.en"} is_a: CHEBI:36885 ! 20-oxo steroid is_a: CHEBI:47909 ! 3-oxo-Delta(4) steroid is_a: CHEBI:64600 ! C21-steroid hormone -relationship: has_parent_hydride CHEBI:8386 ! pregnane relationship: RO:0000087 CHEBI:49323 ! has role contraceptive drug relationship: RO:0000087 CHEBI:59826 ! has role progestin relationship: RO:0000087 CHEBI:70709 ! has role progesterone receptor agonist relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018040 CHEBI:8386 ! has parent hydride pregnane [Term] id: CHEBI:17029 @@ -2506,17 +2597,18 @@ name: chitin alt_id: CHEBI:13962 alt_id: CHEBI:23099 alt_id: CHEBI:3596 -def: "An aminoglycan consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues." [] -subset: 3_STAR -synonym: "(1->4)-2-acetamido-2-deoxy-beta-D-glucan" EXACT IUPAC_NAME [IUPAC] -synonym: "[1,4-(N-Acetyl-beta-D-glucosaminyl)]n" RELATED [KEGG_COMPOUND] -synonym: "[4)-beta-D-GlcpNAc(1->]n" RELATED [IUPAC] -synonym: "beta-1,4-Poly-N-acetyl-D-glucosamine" RELATED [KEGG_COMPOUND] -synonym: "Chitin" EXACT [KEGG_COMPOUND] -synonym: "chitin" EXACT [IUPAC, UniProt] -xref: CAS:1398-61-4 {source="KEGG COMPOUND"} -xref: KEGG:C00461 -xref: KEGG:G10483 +def: "An aminoglycan consisting of β-(1→4)-linked N-acetyl-D-glucosamine residues." [] +subset: 3:STAR +synonym: "(1->4)-2-acetamido-2-deoxy-beta-D-glucan" EXACT IUPAC:NAME [IUPAC] +synonym: "(1->4)-2-acetamido-2-deoxy-beta-D-glucan" RELATED IUPAC:NAME [iupac] +synonym: "[1,4-(N-Acetyl-beta-D-glucosaminyl)]n" RELATED [kegg.compound] +synonym: "[4)-beta-D-GlcpNAc(1->]n" RELATED [iupac] +synonym: "beta-1,4-Poly-N-acetyl-D-glucosamine" RELATED [kegg.compound] +synonym: "Chitin" RELATED [kegg.compound] +synonym: "chitin" RELATED [iupac, uniprot_ft] +xref: cas:1398-61-4 {source="cas"} +xref: kegg.compound:C00461 {source="kegg.compound"} +xref: kegg.glycan:G10483 {source="kegg.glycan"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:21638 ! N-acylglucosamine is_a: CHEBI:22506 ! aminoglycan @@ -2533,17 +2625,17 @@ alt_id: CHEBI:13646 alt_id: CHEBI:24974 alt_id: CHEBI:6127 alt_id: CHEBI:8742 -def: "A compound in which a carbonyl group is bonded to two carbon atoms: R2C=O (neither R may be H)." [] -subset: 3_STAR -synonym: "a ketone" RELATED [UniProt] -synonym: "cetone" RELATED [ChEBI] -synonym: "Keton" RELATED [ChEBI] -synonym: "Ketone" EXACT [KEGG_COMPOUND] -synonym: "ketones" EXACT IUPAC_NAME [IUPAC] -synonym: "ketones" RELATED [ChEBI] -synonym: "R-CO-R'" RELATED [KEGG_COMPOUND] -xref: KEGG:C01450 -xref: Wikipedia:Ketone +def: "A compound in which a carbonyl group is bonded to two carbon atoms: R2C=O (neither R may be H)." [] +subset: 3:STAR +synonym: "a ketone" RELATED [uniprot_ft] +synonym: "cetone" RELATED [chebi] +synonym: "Keton" RELATED [chebi] +synonym: "Ketone" RELATED [kegg.compound] +synonym: "ketones" EXACT IUPAC:NAME [ChEBI, IUPAC] +synonym: "ketones" RELATED IUPAC:NAME [chebi, iupac] +synonym: "R-CO-R'" RELATED [kegg.compound] +xref: kegg.compound:C01450 {source="kegg.compound"} +xref: wikipedia.en:Ketone {source="wikipedia.en"} is_a: CHEBI:36586 ! carbonyl compound [Term] @@ -2553,17 +2645,18 @@ alt_id: CHEBI:14349 alt_id: CHEBI:5481 alt_id: CHEBI:5493 def: "A compound in which a carbohydrate component is covalently bound to a protein component." [] -subset: 3_STAR -synonym: "a glycoprotein" RELATED [UniProt] -synonym: "glicoproteina" RELATED [ChEBI] -synonym: "glicoproteinas" RELATED [ChEBI] -synonym: "Glycoprotein" EXACT [KEGG_COMPOUND] -synonym: "glycoproteine" RELATED [ChEBI] -synonym: "glycoproteines" RELATED [ChEBI] -synonym: "glycoproteins" EXACT IUPAC_NAME [IUPAC] -synonym: "Glykoprotein" RELATED [ChEBI] -synonym: "Glykoproteine" RELATED [ChEBI] -xref: KEGG:C00326 +subset: 3:STAR +synonym: "a glycoprotein" RELATED [uniprot_ft] +synonym: "glicoproteina" RELATED [chebi] +synonym: "glicoproteinas" RELATED [chebi] +synonym: "Glycoprotein" RELATED [kegg.compound] +synonym: "glycoproteine" RELATED [chebi] +synonym: "glycoproteines" RELATED [chebi] +synonym: "glycoproteins" EXACT IUPAC:NAME [IUPAC] +synonym: "glycoproteins" RELATED IUPAC:NAME [iupac] +synonym: "Glykoprotein" RELATED [chebi] +synonym: "Glykoproteine" RELATED [chebi] +xref: kegg.compound:C00326 {source="kegg.compound"} is_a: CHEBI:33837 ! conjugated protein is_a: CHEBI:63299 ! carbohydrate derivative @@ -2575,16 +2668,19 @@ alt_id: CHEBI:24277 alt_id: CHEBI:33929 alt_id: CHEBI:5418 def: "An aldohexose used as a source of energy and metabolic intermediate." [] -subset: 3_STAR -synonym: "DL-glucose" RELATED [ChEBI] -synonym: "Glc" RELATED [JCBN] -synonym: "gluco-hexose" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "DL-glucose" RELATED [chebi] +synonym: "Glc" RELATED [jcbn] +synonym: "gluco-hexose" EXACT IUPAC:NAME [IUPAC] +synonym: "gluco-hexose" RELATED IUPAC:NAME [iupac] synonym: "Glucose" EXACT [KEGG_COMPOUND] -synonym: "glucose" EXACT IUPAC_NAME [IUPAC] -synonym: "Glukose" RELATED [ChEBI] -xref: CAS:50-99-7 {source="KEGG COMPOUND"} -xref: KEGG:C00293 -xref: Wikipedia:Glucose +synonym: "Glucose" RELATED [kegg.compound] +synonym: "glucose" EXACT IUPAC:NAME [IUPAC] +synonym: "glucose" RELATED IUPAC:NAME [iupac] +synonym: "Glukose" RELATED [chebi] +xref: cas:50-99-7 {source="cas"} +xref: kegg.compound:C00293 {source="kegg.compound"} +xref: wikipedia.en:Glucose {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33917 ! aldohexose relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite @@ -2594,19 +2690,21 @@ id: CHEBI:17258 name: 7H-purine alt_id: CHEBI:14968 alt_id: CHEBI:8639 -def: "The 7H-tautomer of purine." [] -subset: 3_STAR -synonym: "7H-purine" EXACT IUPAC_NAME [IUPAC] -synonym: "Purine" RELATED [KEGG_COMPOUND] -synonym: "Purine base" RELATED [KEGG_COMPOUND] -xref: Gmelin:601779 {source="Gmelin"} -xref: HMDB:HMDB0001366 -xref: KEGG:C15587 -xref: Reaxys:3200 {source="Reaxys"} +def: "The 7H-tautomer of purine." [] +subset: 3:STAR +synonym: "7H-purine" EXACT IUPAC:NAME [IUPAC] +synonym: "7H-purine" RELATED IUPAC:NAME [iupac] +synonym: "Purine" EXACT [KEGG_COMPOUND] +synonym: "Purine" RELATED [kegg.compound] +synonym: "Purine base" RELATED [kegg.compound] +xref: gmelin:601779 {source="gmelin"} +xref: hmdb:HMDB0001366 {source="hmdb"} +xref: kegg.compound:C15587 {source="kegg.compound"} +xref: reaxys:3200 {source="reaxys"} is_a: CHEBI:35584 ! purine -relationship: is_tautomer_of CHEBI:35586 ! 1H-purine -relationship: is_tautomer_of CHEBI:35588 ! 3H-purine -relationship: is_tautomer_of CHEBI:35589 ! 9H-purine +relationship: RO:0018036 CHEBI:35586 ! is tautomer of 1H-purine +relationship: RO:0018036 CHEBI:35588 ! is tautomer of 3H-purine +relationship: RO:0018036 CHEBI:35589 ! is tautomer of 9H-purine [Term] id: CHEBI:17272 @@ -2614,32 +2712,32 @@ name: propionate alt_id: CHEBI:14903 alt_id: CHEBI:26290 def: "The conjugate base of propionic acid; a key precursor in lipid biosynthesis." [] -subset: 3_STAR -synonym: "carboxylatoethane" RELATED [ChEBI] -synonym: "CH3-CH2-COO(-)" RELATED [IUPAC] -synonym: "EtCO2 anion" RELATED [NIST_Chemistry_WebBook] -synonym: "ethanecarboxylate" RELATED [ChEBI] -synonym: "ethylformate" RELATED [ChEBI] -synonym: "metacetonate" RELATED [ChEBI] -synonym: "methylacetate" RELATED [ChEBI] -synonym: "propanate" RELATED [ChEBI] -synonym: "propanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "propanoate" RELATED [UniProt] -synonym: "propanoic acid, ion(1-)" RELATED [ChemIDplus] -synonym: "propionate" EXACT [IUPAC] -synonym: "pseudoacetate" RELATED [ChEBI] -xref: Beilstein:3587503 {source="Beilstein"} -xref: CAS:72-03-7 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:1820 {source="Gmelin"} -xref: KEGG:C00163 -xref: PMID:17951291 {source="Europe PMC"} -xref: PMID:18375549 {source="Europe PMC"} -xref: PMID:2647392 {source="Europe PMC"} -xref: UM-BBD_compID:c0277 {source="UM-BBD"} +subset: 3:STAR +synonym: "carboxylatoethane" RELATED [chebi] +synonym: "CH3-CH2-COO(-)" RELATED [iupac] +synonym: "EtCO2 anion" RELATED [nist] +synonym: "ethanecarboxylate" RELATED [chebi] +synonym: "ethylformate" RELATED [chebi] +synonym: "metacetonate" RELATED [chebi] +synonym: "methylacetate" RELATED [chebi] +synonym: "propanate" RELATED [chebi] +synonym: "propanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "propanoate" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "propanoic acid, ion(1-)" RELATED [chemidplus] +synonym: "propionate" RELATED [iupac] +synonym: "pseudoacetate" RELATED [chebi] +xref: beilstein:3587503 {source="beilstein"} +xref: cas:72-03-7 {source="cas"} +xref: gmelin:1820 {source="gmelin"} +xref: kegg.compound:C00163 {source="kegg.compound"} +xref: pubmed:17951291 {source="pubmed"} +xref: pubmed:18375549 {source="pubmed"} +xref: pubmed:2647392 {source="pubmed"} +xref: umbbd.compound:c0277 {source="umbbd.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:78113 ! fatty acid anion 3:0 -relationship: is_conjugate_base_of CHEBI:30768 ! propionic acid relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:30768 ! is deprotonated form of propionic acid [Term] id: CHEBI:17295 @@ -2650,52 +2748,51 @@ alt_id: CHEBI:44851 alt_id: CHEBI:44885 alt_id: CHEBI:45079 alt_id: CHEBI:6282 -def: "The L-enantiomer of phenylalanine." [] -subset: 3_STAR -synonym: "(2S)-2-amino-3-phenylpropanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "(S)-2-Amino-3-phenylpropionic acid" RELATED [HMDB] -synonym: "(S)-alpha-Amino-beta-phenylpropionic acid" RELATED [KEGG_COMPOUND] -synonym: "3-phenyl-L-alanine" RELATED [NIST_Chemistry_WebBook] -synonym: "beta-phenyl-L-alanine" RELATED [NIST_Chemistry_WebBook] -synonym: "F" RELATED [ChEBI] +def: "The L-enantiomer of phenylalanine." [] +subset: 3:STAR +synonym: "(2S)-2-amino-3-phenylpropanoic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-amino-3-phenylpropanoic acid" RELATED IUPAC:NAME [iupac] +synonym: "(S)-2-Amino-3-phenylpropionic acid" RELATED [hmdb] +synonym: "(S)-alpha-Amino-beta-phenylpropionic acid" RELATED [kegg.compound] +synonym: "3-phenyl-L-alanine" RELATED [nist] +synonym: "beta-phenyl-L-alanine" RELATED [nist] +synonym: "F" RELATED [chebi] synonym: "L-Phenylalanine" EXACT [KEGG_COMPOUND] -synonym: "L-phenylalanine" EXACT IUPAC_NAME [IUPAC] -synonym: "Phe" RELATED [ChEBI] -synonym: "PHENYLALANINE" RELATED [PDBeChem] -xref: CAS:63-91-2 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:2144 {source="DrugCentral"} -xref: DrugBank:DB00120 -xref: ECMDB:ECMDB00159 -xref: Gmelin:50837 {source="Gmelin"} -xref: HMDB:HMDB0000159 -xref: KEGG:C00079 -xref: KEGG:D00021 -xref: KNApSAcK:C00001386 -xref: MetaCyc:PHE -xref: PDBeChem:PHE -xref: PMID:13945318 {source="Europe PMC"} -xref: PMID:16893175 {source="Europe PMC"} -xref: PMID:17784858 {source="Europe PMC"} -xref: PMID:21203787 {source="Europe PMC"} -xref: PMID:21956539 {source="Europe PMC"} -xref: PMID:22081386 {source="Europe PMC"} -xref: PMID:22112574 {source="Europe PMC"} -xref: PMID:22143120 {source="Europe PMC"} -xref: PMID:22209218 {source="Europe PMC"} -xref: PMID:22494897 {source="Europe PMC"} -xref: PMID:23836015 {source="Europe PMC"} -xref: PMID:24464217 {source="Europe PMC"} -xref: PMID:24733517 {source="Europe PMC"} -xref: PMID:24966042 {source="Europe PMC"} -xref: Reaxys:1910408 {source="Reaxys"} -xref: Wikipedia:Phenylalanine -xref: YMDB:YMDB00304 +synonym: "L-Phenylalanine" RELATED [kegg.compound] +synonym: "L-phenylalanine" EXACT IUPAC:NAME [IUPAC] +synonym: "L-phenylalanine" RELATED IUPAC:NAME [iupac] +synonym: "Phe" RELATED [chebi] +synonym: "PHENYLALANINE" RELATED [pdb-ccd] +xref: cas:63-91-2 {source="cas"} +xref: drugbank:DB00120 {source="drugbank"} +xref: drugcentral:2144 {source="drugcentral"} +xref: ecmdb:ECMDB00159 {source="ecmdb"} +xref: gmelin:50837 {source="gmelin"} +xref: hmdb:HMDB0000159 {source="hmdb"} +xref: kegg.compound:C00079 {source="kegg.compound"} +xref: kegg.drug:D00021 {source="kegg.drug"} +xref: knapsack:C00001386 {source="knapsack"} +xref: metacyc.compound:PHE {source="metacyc.compound"} +xref: pdb-ccd:PHE {source="pdb-ccd"} +xref: pubmed:13945318 {source="pubmed"} +xref: pubmed:16893175 {source="pubmed"} +xref: pubmed:17784858 {source="pubmed"} +xref: pubmed:21203787 {source="pubmed"} +xref: pubmed:21956539 {source="pubmed"} +xref: pubmed:22081386 {source="pubmed"} +xref: pubmed:22112574 {source="pubmed"} +xref: pubmed:22143120 {source="pubmed"} +xref: pubmed:22209218 {source="pubmed"} +xref: pubmed:22494897 {source="pubmed"} +xref: pubmed:23836015 {source="pubmed"} +xref: pubmed:24464217 {source="pubmed"} +xref: pubmed:24733517 {source="pubmed"} +xref: pubmed:24966042 {source="pubmed"} +xref: reaxys:1910408 {source="reaxys"} +xref: wikipedia.en:Phenylalanine {source="wikipedia.en"} +xref: ymdb:YMDB00304 {source="ymdb"} is_a: CHEBI:28044 ! phenylalanine is_a: CHEBI:73690 ! erythrose 4-phosphate/phosphoenolpyruvate family amino acid -relationship: is_conjugate_acid_of CHEBI:32486 ! L-phenylalaninate -relationship: is_conjugate_base_of CHEBI:32487 ! L-phenylalaninium -relationship: is_enantiomer_of CHEBI:16998 ! D-phenylalanine -relationship: is_tautomer_of CHEBI:58095 ! L-phenylalanine zwitterion relationship: RO:0000087 CHEBI:27027 ! has role micronutrient relationship: RO:0000087 CHEBI:50733 ! has role nutraceutical relationship: RO:0000087 CHEBI:63332 ! has role EC 3.1.3.1 (alkaline phosphatase) inhibitor @@ -2705,18 +2802,22 @@ relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:76967 ! has role human xenobiotic metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite relationship: RO:0000087 CHEBI:84735 ! has role algal metabolite +relationship: RO:0018033 CHEBI:32487 ! is deprotonated form of L-phenylalaninium +relationship: RO:0018034 CHEBI:32486 ! is protonated form of L-phenylalaninate +relationship: RO:0018036 CHEBI:58095 ! is tautomer of L-phenylalanine zwitterion +relationship: RO:0018039 CHEBI:16998 ! is enantiomer of D-phenylalanine [Term] id: CHEBI:173084 name: ferroptosis inhibitor def: "Any substance that inhibits the process of ferroptosis (a type of programmed cell death dependent on iron and characterized by the accumulation of lipid peroxides) in organisms." [] -subset: 3_STAR -synonym: "ferroptosis inhibitors" RELATED [ChEBI] -xref: PMID:32015325 {source="SUBMITTER"} -xref: PMID:32256352 {source="Europe PMC"} -xref: PMID:32413317 {source="Europe PMC"} -xref: PMID:33495651 {source="Europe PMC"} -xref: Wikipedia:Ferroptosis +subset: 3:STAR +synonym: "ferroptosis inhibitors" RELATED [chebi] +xref: pubmed:32015325 {source="pubmed"} +xref: pubmed:32256352 {source="pubmed"} +xref: pubmed:32413317 {source="pubmed"} +xref: pubmed:33495651 {source="pubmed"} +xref: wikipedia.en:Ferroptosis {source="wikipedia.en"} is_a: CHEBI:35222 ! inhibitor is_a: CHEBI:52206 ! biochemical role @@ -2724,13 +2825,13 @@ is_a: CHEBI:52206 ! biochemical role id: CHEBI:173085 name: ferroptosis inducer def: "Any substance that induces or promotes ferroptosis (a type of programmed cell death dependent on iron and characterized by the accumulation of lipid peroxides) in organisms." [] -subset: 3_STAR -synonym: "ferroptosis inducers" RELATED [ChEBI] -xref: PMID:31899616 {source="Europe PMC"} -xref: PMID:32015325 {source="SUBMITTER"} -xref: PMID:33167414 {source="Europe PMC"} -xref: PMID:34012798 {source="Europe PMC"} -xref: Wikipedia:Ferroptosis +subset: 3:STAR +synonym: "ferroptosis inducers" RELATED [chebi] +xref: pubmed:31899616 {source="pubmed"} +xref: pubmed:32015325 {source="pubmed"} +xref: pubmed:33167414 {source="pubmed"} +xref: pubmed:34012798 {source="pubmed"} +xref: wikipedia.en:Ferroptosis {source="wikipedia.en"} is_a: CHEBI:52206 ! biochemical role [Term] @@ -2738,18 +2839,19 @@ id: CHEBI:17326 name: nucleoside 5'-triphoshate alt_id: CHEBI:13411 alt_id: CHEBI:14677 +alt_id: CHEBI:17035 alt_id: CHEBI:25610 alt_id: CHEBI:7442 alt_id: CHEBI:7655 -subset: 3_STAR -synonym: "NTP" RELATED [KEGG_COMPOUND] -synonym: "Nucleoside triphosphate" RELATED [KEGG_COMPOUND] -synonym: "nucleoside triphosphates" RELATED [ChEBI] -xref: KEGG:C00201 +subset: 3:STAR +synonym: "NTP" RELATED [kegg.compound] +synonym: "Nucleoside triphosphate" RELATED [kegg.compound] +synonym: "nucleoside triphosphates" RELATED [chebi] +xref: kegg.compound:C00201 {source="kegg.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25608 ! nucleoside phosphate -relationship: is_conjugate_acid_of CHEBI:58104 ! nucleoside 5'-triphoshate(3-) relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018034 CHEBI:58104 ! is protonated form of nucleoside 5'-triphoshate(3-) [Term] id: CHEBI:17347 @@ -2758,37 +2860,37 @@ alt_id: CHEBI:15214 alt_id: CHEBI:26883 alt_id: CHEBI:45798 alt_id: CHEBI:9461 -def: "An androstanoid having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4-C-5.." [] -subset: 3_STAR -synonym: "17beta-Hydroxy-4-androsten-3-one" RELATED [KEGG_COMPOUND] -synonym: "17beta-hydroxy-4-androsten-3-one" RELATED [ChEBI] -synonym: "17beta-hydroxyandrost-4-en-3-one" EXACT IUPAC_NAME [IUPAC] -synonym: "4-androsten-17beta-ol-3-one" RELATED [NIST_Chemistry_WebBook] -synonym: "Androderm" RELATED [ChemIDplus] -synonym: "Testosteron" RELATED [ChemIDplus] -synonym: "testosterona" RELATED INN [ChemIDplus] -synonym: "TESTOSTERONE" EXACT [PDBeChem] -synonym: "Testosterone" EXACT [KEGG_COMPOUND] -synonym: "testosterone" EXACT [UniProt] -synonym: "testosterone" RELATED INN [ChemIDplus] -synonym: "testosteronum" RELATED INN [ChemIDplus] -xref: Beilstein:3653705 {source="Beilstein"} -xref: CAS:58-22-0 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:2607 {source="DrugCentral"} -xref: DrugBank:DB00624 -xref: Gmelin:538843 {source="Gmelin"} -xref: HMDB:HMDB0000234 -xref: KEGG:C00535 -xref: KEGG:D00075 -xref: KNApSAcK:C00003675 -xref: LIPID_MAPS_instance:LMST02020002 {source="LIPID MAPS"} -xref: PDBeChem:TES -xref: PMID:10438974 {source="Europe PMC"} -xref: PMID:11786693 {source="Europe PMC"} -xref: PMID:18900503 {source="Europe PMC"} -xref: PMID:24498482 {source="Europe PMC"} -xref: Reaxys:1915399 {source="Reaxys"} -xref: Wikipedia:Testosterone +def: "An androstanoid having 17β-hydroxy and 3-oxo groups, together with unsaturation at C-4‒C-5.." [] +subset: 3:STAR +synonym: "17beta-Hydroxy-4-androsten-3-one" RELATED [kegg.compound] +synonym: "17beta-hydroxy-4-androsten-3-one" RELATED [chebi] +synonym: "17beta-hydroxyandrost-4-en-3-one" EXACT IUPAC:NAME [IUPAC] +synonym: "17beta-hydroxyandrost-4-en-3-one" RELATED IUPAC:NAME [iupac] +synonym: "4-androsten-17beta-ol-3-one" RELATED [nist] +synonym: "Androderm" RELATED [chemidplus] +synonym: "Testosteron" RELATED [chemidplus] +synonym: "testosterona" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "TESTOSTERONE" RELATED [pdb-ccd] +synonym: "Testosterone" RELATED [kegg.compound] +synonym: "testosterone" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus, uniprot_ft] +synonym: "testosteronum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +xref: beilstein:3653705 {source="beilstein"} +xref: cas:58-22-0 {source="cas"} +xref: drugbank:DB00624 {source="drugbank"} +xref: drugcentral:2607 {source="drugcentral"} +xref: gmelin:538843 {source="gmelin"} +xref: hmdb:HMDB0000234 {source="hmdb"} +xref: kegg.compound:C00535 {source="kegg.compound"} +xref: kegg.drug:D00075 {source="kegg.drug"} +xref: knapsack:C00003675 {source="knapsack"} +xref: lipidmaps:LMST02020002 {source="lipidmaps"} +xref: pdb-ccd:TES {source="pdb-ccd"} +xref: pubmed:10438974 {source="pubmed"} +xref: pubmed:11786693 {source="pubmed"} +xref: pubmed:18900503 {source="pubmed"} +xref: pubmed:24498482 {source="pubmed"} +xref: reaxys:1915399 {source="reaxys"} +xref: wikipedia.en:Testosterone {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:131621 ! C19-steroid is_a: CHEBI:35343 ! 17beta-hydroxy steroid @@ -2806,23 +2908,26 @@ alt_id: CHEBI:13432 alt_id: CHEBI:13753 alt_id: CHEBI:13805 alt_id: CHEBI:13806 +alt_id: CHEBI:17496 alt_id: CHEBI:22291 alt_id: CHEBI:2554 alt_id: CHEBI:8750 def: "A compound RC(=O)H, in which a carbonyl group is bonded to one hydrogen atom and to one R group." [] -subset: 3_STAR -synonym: "aldehido" RELATED [ChEBI] -synonym: "aldehidos" RELATED [ChEBI] -synonym: "Aldehyd" RELATED [ChEBI] +subset: 3:STAR +synonym: "aldehido" RELATED [chebi] +synonym: "aldehidos" RELATED [chebi] +synonym: "Aldehyd" RELATED [chebi] synonym: "Aldehyde" EXACT [KEGG_COMPOUND] -synonym: "aldehyde" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "aldehydes" EXACT IUPAC_NAME [IUPAC] -synonym: "aldehydes" RELATED [ChEBI] -synonym: "aldehydum" RELATED [ChEBI] -synonym: "an aldehyde" RELATED [UniProt] -synonym: "RC(=O)H" RELATED [IUPAC] -synonym: "RCHO" RELATED [KEGG_COMPOUND] -xref: KEGG:C00071 +synonym: "Aldehyde" RELATED [kegg.compound] +synonym: "aldehyde" EXACT IUPAC:NAME [IUPAC] +synonym: "aldehyde" RELATED IUPAC:NAME [chebi, iupac] +synonym: "aldehydes" EXACT IUPAC:NAME [IUPAC] +synonym: "aldehydes" RELATED IUPAC:NAME [chebi, iupac] +synonym: "aldehydum" RELATED [chebi] +synonym: "an aldehyde" RELATED [uniprot_ft] +synonym: "RC(=O)H" RELATED [iupac] +synonym: "RCHO" RELATED [kegg.compound] +xref: kegg.compound:C00071 {source="kegg.compound"} is_a: CHEBI:36586 ! carbonyl compound relationship: has_part CHEBI:42485 ! formyl group @@ -2834,46 +2939,53 @@ alt_id: CHEBI:22863 alt_id: CHEBI:40961 alt_id: CHEBI:5589 def: "The carbon oxoanion resulting from the removal of a proton from carbonic acid." [] -subset: 3_STAR -synonym: "[CO2(OH)](-)" RELATED [IUPAC] -synonym: "Acid carbonate" RELATED [KEGG_COMPOUND] -synonym: "Bicarbonate" RELATED [KEGG_COMPOUND] -synonym: "BICARBONATE ION" RELATED [PDBeChem] -synonym: "HCO3(-)" RELATED [IUPAC] -synonym: "HCO3-" RELATED [KEGG_COMPOUND] -synonym: "hydrogen carbonate" RELATED [PDBeChem] -synonym: "hydrogen(trioxidocarbonate)(1-)" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "[CO2(OH)](-)" RELATED [iupac] +synonym: "Acid carbonate" RELATED [kegg.compound] +synonym: "Bicarbonate" RELATED [kegg.compound] +synonym: "BICARBONATE ION" RELATED [pdb-ccd] +synonym: "HCO3(-)" RELATED [iupac] +synonym: "HCO3-" RELATED [kegg.compound] +synonym: "hydrogen carbonate" RELATED [pdb-ccd] +synonym: "hydrogen(trioxidocarbonate)(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen(trioxidocarbonate)(1-)" RELATED IUPAC:NAME [iupac] synonym: "Hydrogencarbonate" EXACT [KEGG_COMPOUND] -synonym: "hydrogencarbonate" EXACT IUPAC_NAME [IUPAC, UniProt] -synonym: "hydrogencarbonate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogentrioxocarbonate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogentrioxocarbonate(IV)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydroxidodioxidocarbonate(1-)" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:3903504 {source="Beilstein"} -xref: CAS:71-52-3 {source="ChemIDplus"} -xref: Gmelin:49249 {source="Gmelin"} -xref: HMDB:HMDB0000595 -xref: KEGG:C00288 -xref: MetaCyc:HCO3 -xref: PDBeChem:BCT -xref: PMID:17215880 {source="Europe PMC"} -xref: PMID:17505962 {source="Europe PMC"} -xref: PMID:18439416 {source="Europe PMC"} -xref: PMID:28732801 {source="Europe PMC"} -xref: PMID:29150416 {source="Europe PMC"} -xref: PMID:29460248 {source="Europe PMC"} -xref: PMID:29466234 {source="Europe PMC"} -xref: PMID:4208463 {source="Europe PMC"} -xref: Wikipedia:Bicarbonate +synonym: "Hydrogencarbonate" RELATED [kegg.compound] +synonym: "hydrogencarbonate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogencarbonate" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "hydrogencarbonate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogencarbonate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogentrioxocarbonate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogentrioxocarbonate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogentrioxocarbonate(IV)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogentrioxocarbonate(IV)" RELATED IUPAC:NAME [iupac] +synonym: "hydroxidodioxidocarbonate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydroxidodioxidocarbonate(1-)" RELATED IUPAC:NAME [iupac] +xref: beilstein:3903504 {source="beilstein"} +xref: cas:71-52-3 {source="cas"} +xref: gmelin:49249 {source="gmelin"} +xref: hmdb:HMDB0000595 {source="hmdb"} +xref: kegg.compound:C00288 {source="kegg.compound"} +xref: metacyc.compound:HCO3 {source="metacyc.compound"} +xref: pdb-ccd:BCT {source="pdb-ccd"} +xref: pubmed:17215880 {source="pubmed"} +xref: pubmed:17505962 {source="pubmed"} +xref: pubmed:18439416 {source="pubmed"} +xref: pubmed:28732801 {source="pubmed"} +xref: pubmed:29150416 {source="pubmed"} +xref: pubmed:29460248 {source="pubmed"} +xref: pubmed:29466234 {source="pubmed"} +xref: pubmed:4208463 {source="pubmed"} +xref: wikipedia.en:Bicarbonate {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35604 ! carbon oxoanion -relationship: is_conjugate_acid_of CHEBI:41609 ! carbonate -relationship: is_conjugate_base_of CHEBI:28976 ! carbonic acid relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:28976 ! is deprotonated form of carbonic acid +relationship: RO:0018034 CHEBI:41609 ! is protonated form of carbonate [Term] id: CHEBI:17578 @@ -2883,66 +2995,69 @@ alt_id: CHEBI:27022 alt_id: CHEBI:44023 alt_id: CHEBI:9624 def: "The simplest member of the class toluenes consisting of a benzene core which bears a single methyl substituent." [] -subset: 3_STAR -synonym: "methylbenzene" RELATED [PDBeChem] -synonym: "phenylmethane" RELATED [ChemIDplus] -synonym: "Toluen" RELATED [NIST_Chemistry_WebBook] +subset: 3:STAR +synonym: "methylbenzene" RELATED [pdb-ccd] +synonym: "phenylmethane" RELATED [chemidplus] +synonym: "Toluen" RELATED [nist] synonym: "TOLUENE" EXACT [PDBeChem] +synonym: "TOLUENE" RELATED [pdb-ccd] synonym: "Toluene" EXACT [KEGG_COMPOUND] -synonym: "toluene" EXACT IUPAC_NAME [ChEBI, IUPAC, UniProt] -synonym: "Toluol" RELATED [NIST_Chemistry_WebBook] -xref: CAS:108-88-3 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB01900 -xref: Gmelin:2456 {source="Gmelin"} -xref: KEGG:C01455 -xref: PDBeChem:MBN -xref: PMID:11182169 {source="Europe PMC"} -xref: PMID:11314682 {source="Europe PMC"} -xref: PMID:11846266 {source="Europe PMC"} -xref: PMID:11991009 {source="Europe PMC"} -xref: PMID:12062755 {source="Europe PMC"} -xref: PMID:12213539 {source="Europe PMC"} -xref: PMID:12237258 {source="Europe PMC"} -xref: PMID:12784113 {source="Europe PMC"} -xref: PMID:12876426 {source="Europe PMC"} -xref: PMID:14512097 {source="Europe PMC"} -xref: PMID:14559343 {source="Europe PMC"} -xref: PMID:14605898 {source="Europe PMC"} -xref: PMID:15015825 {source="Europe PMC"} -xref: PMID:15019953 {source="Europe PMC"} -xref: PMID:15119846 {source="Europe PMC"} -xref: PMID:15193425 {source="Europe PMC"} -xref: PMID:15542760 {source="Europe PMC"} -xref: PMID:15567510 {source="Europe PMC"} -xref: PMID:15695158 {source="Europe PMC"} -xref: PMID:15796064 {source="Europe PMC"} -xref: PMID:16316648 {source="Europe PMC"} -xref: PMID:16348226 {source="Europe PMC"} -xref: PMID:16601996 {source="Europe PMC"} -xref: PMID:17145141 {source="Europe PMC"} -xref: PMID:17175136 {source="Europe PMC"} -xref: PMID:17497535 {source="Europe PMC"} -xref: PMID:17725881 {source="Europe PMC"} -xref: PMID:18397809 {source="Europe PMC"} -xref: PMID:18832024 {source="Europe PMC"} -xref: PMID:19261054 {source="Europe PMC"} -xref: PMID:19384711 {source="Europe PMC"} -xref: PMID:19429395 {source="Europe PMC"} -xref: PMID:19635754 {source="Europe PMC"} -xref: PMID:19765629 {source="Europe PMC"} -xref: PMID:19825861 {source="Europe PMC"} -xref: PMID:19928203 {source="Europe PMC"} -xref: PMID:19969016 {source="Europe PMC"} -xref: PMID:20347282 {source="Europe PMC"} -xref: PMID:20837561 {source="Europe PMC"} -xref: PMID:21430649 {source="Europe PMC"} -xref: PMID:21655021 {source="Europe PMC"} -xref: PMID:21731073 {source="Europe PMC"} -xref: PMID:21802510 {source="Europe PMC"} -xref: PMID:21840036 {source="Europe PMC"} -xref: Reaxys:635760 {source="Reaxys"} -xref: UM-BBD_compID:c0114 {source="UM-BBD"} -xref: Wikipedia:Toluene +synonym: "Toluene" RELATED [kegg.compound] +synonym: "toluene" EXACT IUPAC:NAME [IUPAC] +synonym: "toluene" RELATED IUPAC:NAME [chebi, iupac, uniprot_ft] +synonym: "Toluol" RELATED [nist] +xref: cas:108-88-3 {source="cas"} +xref: drugbank:DB01900 {source="drugbank"} +xref: gmelin:2456 {source="gmelin"} +xref: kegg.compound:C01455 {source="kegg.compound"} +xref: pdb-ccd:MBN {source="pdb-ccd"} +xref: pubmed:11182169 {source="pubmed"} +xref: pubmed:11314682 {source="pubmed"} +xref: pubmed:11846266 {source="pubmed"} +xref: pubmed:11991009 {source="pubmed"} +xref: pubmed:12062755 {source="pubmed"} +xref: pubmed:12213539 {source="pubmed"} +xref: pubmed:12237258 {source="pubmed"} +xref: pubmed:12784113 {source="pubmed"} +xref: pubmed:12876426 {source="pubmed"} +xref: pubmed:14512097 {source="pubmed"} +xref: pubmed:14559343 {source="pubmed"} +xref: pubmed:14605898 {source="pubmed"} +xref: pubmed:15015825 {source="pubmed"} +xref: pubmed:15019953 {source="pubmed"} +xref: pubmed:15119846 {source="pubmed"} +xref: pubmed:15193425 {source="pubmed"} +xref: pubmed:15542760 {source="pubmed"} +xref: pubmed:15567510 {source="pubmed"} +xref: pubmed:15695158 {source="pubmed"} +xref: pubmed:15796064 {source="pubmed"} +xref: pubmed:16316648 {source="pubmed"} +xref: pubmed:16348226 {source="pubmed"} +xref: pubmed:16601996 {source="pubmed"} +xref: pubmed:17145141 {source="pubmed"} +xref: pubmed:17175136 {source="pubmed"} +xref: pubmed:17497535 {source="pubmed"} +xref: pubmed:17725881 {source="pubmed"} +xref: pubmed:18397809 {source="pubmed"} +xref: pubmed:18832024 {source="pubmed"} +xref: pubmed:19261054 {source="pubmed"} +xref: pubmed:19384711 {source="pubmed"} +xref: pubmed:19429395 {source="pubmed"} +xref: pubmed:19635754 {source="pubmed"} +xref: pubmed:19765629 {source="pubmed"} +xref: pubmed:19825861 {source="pubmed"} +xref: pubmed:19928203 {source="pubmed"} +xref: pubmed:19969016 {source="pubmed"} +xref: pubmed:20347282 {source="pubmed"} +xref: pubmed:20837561 {source="pubmed"} +xref: pubmed:21430649 {source="pubmed"} +xref: pubmed:21655021 {source="pubmed"} +xref: pubmed:21731073 {source="pubmed"} +xref: pubmed:21802510 {source="pubmed"} +xref: pubmed:21840036 {source="pubmed"} +xref: reaxys:635760 {source="reaxys"} +xref: umbbd.compound:c0114 {source="umbbd.compound"} +xref: wikipedia.en:Toluene {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:134179 ! volatile organic compound is_a: CHEBI:27024 ! toluenes @@ -2959,77 +3074,77 @@ alt_id: CHEBI:10355 alt_id: CHEBI:12392 alt_id: CHEBI:22834 alt_id: CHEBI:40987 -def: "A cyclic carotene obtained by dimerisation of all-trans-retinol. A strongly-coloured red-orange pigment abundant in plants and fruit and the most active and important provitamin A carotenoid." [] -subset: 3_STAR -synonym: "1,1'-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaene-1,18-diyl]bis(2,6,6-trimethylcyclohexene)" RELATED [ChEBI] -synonym: "all-trans-beta-carotene" RELATED [NIST_Chemistry_WebBook, UniProt] -synonym: "beta,beta-carotene" EXACT IUPAC_NAME [IUPAC] -synonym: "BETA-CAROTENE" EXACT [PDBeChem] -synonym: "beta-Carotene" EXACT [KEGG_COMPOUND] -synonym: "beta-Karotin" RELATED [ChEBI] -xref: CAS:7235-40-7 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: COMe:MOL000093 -xref: Drug_Central:345 {source="DrugCentral"} -xref: HMDB:HMDB0000561 -xref: KEGG:C02094 -xref: KEGG:D03101 -xref: KNApSAcK:C00000919 -xref: LIPID_MAPS_instance:LMPR01070000 {source="LIPID MAPS"} -xref: LIPID_MAPS_instance:LMPR01070001 {source="LIPID MAPS"} -xref: MetaCyc:CPD1F-129 -xref: PDBeChem:BCR -xref: PMID:11171227 {source="Europe PMC"} -xref: PMID:11182771 {source="Europe PMC"} -xref: PMID:11332447 {source="Europe PMC"} -xref: PMID:11359610 {source="Europe PMC"} -xref: PMID:11382814 {source="Europe PMC"} -xref: PMID:11567548 {source="Europe PMC"} -xref: PMID:11677037 {source="Europe PMC"} -xref: PMID:11714348 {source="Europe PMC"} -xref: PMID:11962062 {source="Europe PMC"} -xref: PMID:12081834 {source="Europe PMC"} -xref: PMID:12891827 {source="Europe PMC"} -xref: PMID:14658721 {source="Europe PMC"} -xref: PMID:14764912 {source="Europe PMC"} -xref: PMID:14976384 {source="Europe PMC"} -xref: PMID:14997360 {source="Europe PMC"} -xref: PMID:15113067 {source="Europe PMC"} -xref: PMID:15333155 {source="Europe PMC"} -xref: PMID:15695449 {source="Europe PMC"} -xref: PMID:15789045 {source="Europe PMC"} -xref: PMID:15909543 {source="Europe PMC"} -xref: PMID:15949680 {source="Europe PMC"} -xref: PMID:15949683 {source="Europe PMC"} -xref: PMID:16036331 {source="Europe PMC"} -xref: PMID:16087476 {source="Europe PMC"} -xref: PMID:16338959 {source="Europe PMC"} -xref: PMID:16563447 {source="Europe PMC"} -xref: PMID:17004738 {source="Europe PMC"} -xref: PMID:17625873 {source="Europe PMC"} -xref: PMID:17708644 {source="Europe PMC"} -xref: PMID:17851775 {source="Europe PMC"} -xref: PMID:18429004 {source="Europe PMC"} -xref: PMID:18766464 {source="Europe PMC"} -xref: PMID:18767554 {source="Europe PMC"} -xref: PMID:18794175 {source="Europe PMC"} -xref: PMID:19480350 {source="Europe PMC"} -xref: PMID:19574250 {source="Europe PMC"} -xref: PMID:19669835 {source="Europe PMC"} -xref: PMID:19703237 {source="Europe PMC"} -xref: PMID:19852884 {source="Europe PMC"} -xref: PMID:19888275 {source="Europe PMC"} -xref: PMID:19896667 {source="Europe PMC"} -xref: PMID:19937581 {source="Europe PMC"} -xref: PMID:20074992 {source="Europe PMC"} -xref: PMID:20515074 {source="Europe PMC"} -xref: PMID:22079732 {source="Europe PMC"} -xref: PMID:22309480 {source="Europe PMC"} -xref: PMID:22428124 {source="Europe PMC"} -xref: PMID:22489215 {source="Europe PMC"} -xref: PMID:22534340 {source="Europe PMC"} -xref: PMID:22575730 {source="Europe PMC"} -xref: Reaxys:1917416 {source="Reaxys"} -xref: Wikipedia:Beta_Carotene +def: "A cyclic carotene obtained by dimerisation of all-trans-retinol. A strongly-coloured red-orange pigment abundant in plants and fruit and the most active and important provitamin A carotenoid." [] +subset: 3:STAR +synonym: "1,1'-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaene-1,18-diyl]bis(2,6,6-trimethylcyclohexene)" RELATED [chebi] +synonym: "all-trans-beta-carotene" RELATED [nist, uniprot_ft] +synonym: "beta,beta-carotene" EXACT IUPAC:NAME [IUPAC] +synonym: "beta,beta-carotene" RELATED IUPAC:NAME [iupac] +synonym: "BETA-CAROTENE" RELATED [pdb-ccd] +synonym: "beta-Carotene" RELATED [kegg.compound] +synonym: "beta-Karotin" RELATED [chebi] +xref: cas:7235-40-7 {source="cas"} +xref: drugcentral:345 {source="drugcentral"} +xref: hmdb:HMDB0000561 {source="hmdb"} +xref: kegg.compound:C02094 {source="kegg.compound"} +xref: kegg.drug:D03101 {source="kegg.drug"} +xref: knapsack:C00000919 {source="knapsack"} +xref: lipidmaps:LMPR01070000 {source="lipidmaps"} +xref: lipidmaps:LMPR01070001 {source="lipidmaps"} +xref: metacyc.compound:CPD1F-129 {source="metacyc.compound"} +xref: pdb-ccd:BCR {source="pdb-ccd"} +xref: pubmed:11171227 {source="pubmed"} +xref: pubmed:11182771 {source="pubmed"} +xref: pubmed:11332447 {source="pubmed"} +xref: pubmed:11359610 {source="pubmed"} +xref: pubmed:11382814 {source="pubmed"} +xref: pubmed:11567548 {source="pubmed"} +xref: pubmed:11677037 {source="pubmed"} +xref: pubmed:11714348 {source="pubmed"} +xref: pubmed:11962062 {source="pubmed"} +xref: pubmed:12081834 {source="pubmed"} +xref: pubmed:12891827 {source="pubmed"} +xref: pubmed:14658721 {source="pubmed"} +xref: pubmed:14764912 {source="pubmed"} +xref: pubmed:14976384 {source="pubmed"} +xref: pubmed:14997360 {source="pubmed"} +xref: pubmed:15113067 {source="pubmed"} +xref: pubmed:15333155 {source="pubmed"} +xref: pubmed:15695449 {source="pubmed"} +xref: pubmed:15789045 {source="pubmed"} +xref: pubmed:15909543 {source="pubmed"} +xref: pubmed:15949680 {source="pubmed"} +xref: pubmed:15949683 {source="pubmed"} +xref: pubmed:16036331 {source="pubmed"} +xref: pubmed:16087476 {source="pubmed"} +xref: pubmed:16338959 {source="pubmed"} +xref: pubmed:16563447 {source="pubmed"} +xref: pubmed:17004738 {source="pubmed"} +xref: pubmed:17625873 {source="pubmed"} +xref: pubmed:17708644 {source="pubmed"} +xref: pubmed:17851775 {source="pubmed"} +xref: pubmed:18429004 {source="pubmed"} +xref: pubmed:18766464 {source="pubmed"} +xref: pubmed:18767554 {source="pubmed"} +xref: pubmed:18794175 {source="pubmed"} +xref: pubmed:19480350 {source="pubmed"} +xref: pubmed:19574250 {source="pubmed"} +xref: pubmed:19669835 {source="pubmed"} +xref: pubmed:19703237 {source="pubmed"} +xref: pubmed:19852884 {source="pubmed"} +xref: pubmed:19888275 {source="pubmed"} +xref: pubmed:19896667 {source="pubmed"} +xref: pubmed:19937581 {source="pubmed"} +xref: pubmed:20074992 {source="pubmed"} +xref: pubmed:20515074 {source="pubmed"} +xref: pubmed:22079732 {source="pubmed"} +xref: pubmed:22309480 {source="pubmed"} +xref: pubmed:22428124 {source="pubmed"} +xref: pubmed:22489215 {source="pubmed"} +xref: pubmed:22534340 {source="pubmed"} +xref: pubmed:22575730 {source="pubmed"} +xref: reaxys:1917416 {source="reaxys"} +xref: wikipedia.en:Beta_Carotene {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:139120 ! carotenoid beta-end derivative is_a: CHEBI:35163 ! cyclic carotene @@ -3047,9 +3162,9 @@ id: CHEBI:17608 name: D-aldohexose alt_id: CHEBI:12990 alt_id: CHEBI:21038 -def: "Any D-aldose having a chain of six carbon atoms in the molecule." [] -subset: 3_STAR -synonym: "D-aldohexoses" RELATED [ChEBI] +def: "Any D-aldose having a chain of six carbon atoms in the molecule." [] +subset: 3:STAR +synonym: "D-aldohexoses" RELATED [chebi] is_a: CHEBI:33917 ! aldohexose is_a: CHEBI:4194 ! D-hexose @@ -3058,16 +3173,18 @@ id: CHEBI:17634 name: D-glucose alt_id: CHEBI:12965 alt_id: CHEBI:20999 -def: "A glucose with D-configuration." [] -subset: 3_STAR -synonym: "D(+)-glucose" RELATED [ChemIDplus] -synonym: "D-(+)-glucose" RELATED [NIST_Chemistry_WebBook] -synonym: "D-gluco-hexose" EXACT IUPAC_NAME [IUPAC] -synonym: "D-glucose" EXACT IUPAC_NAME [IUPAC] -synonym: "dextrose" RELATED [NIST_Chemistry_WebBook] -synonym: "grape sugar" RELATED [ChemIDplus] -synonym: "Traubenzucker" RELATED [ChemIDplus] -xref: CAS:50-99-7 {source="ChemIDplus", source="NIST Chemistry WebBook"} +def: "A glucose with D-configuration." [] +subset: 3:STAR +synonym: "D(+)-glucose" RELATED [chemidplus] +synonym: "D-(+)-glucose" RELATED [nist] +synonym: "D-gluco-hexose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-gluco-hexose" RELATED IUPAC:NAME [iupac] +synonym: "D-glucose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-glucose" RELATED IUPAC:NAME [iupac] +synonym: "dextrose" RELATED [nist] +synonym: "grape sugar" RELATED [chemidplus] +synonym: "Traubenzucker" RELATED [chemidplus] +xref: cas:50-99-7 {source="cas"} is_a: CHEBI:17234 ! glucose is_a: CHEBI:17608 ! D-aldohexose @@ -3075,33 +3192,33 @@ is_a: CHEBI:17608 ! D-aldohexose id: CHEBI:176497 name: geroprotector def: "Any compound that supports healthy aging, slows the biological aging process, or extends lifespan." [] -subset: 3_STAR -synonym: "anti-aging agent" RELATED [ChEBI] -synonym: "anti-aging agents" RELATED [ChEBI] -synonym: "anti-aging drug" RELATED [ChEBI] -synonym: "anti-aging drugs" RELATED [ChEBI] -synonym: "geroprotective agent" RELATED [ChEBI] -synonym: "geroprotective agents" RELATED [ChEBI] -synonym: "geroprotectors" RELATED [ChEBI] -xref: PMID:23372317 {source="Europe PMC"} -xref: PMID:28580190 {source="Europe PMC"} -xref: PMID:30885572 {source="Europe PMC"} -xref: PMID:33144142 {source="Europe PMC"} -xref: PMID:33973253 {source="Europe PMC"} -xref: PMID:34606237 {source="Europe PMC"} -xref: Wikipedia:Geroprotector +subset: 3:STAR +synonym: "anti-aging agent" RELATED [chebi] +synonym: "anti-aging agents" RELATED [chebi] +synonym: "anti-aging drug" RELATED [chebi] +synonym: "anti-aging drugs" RELATED [chebi] +synonym: "geroprotective agent" RELATED [chebi] +synonym: "geroprotective agents" RELATED [chebi] +synonym: "geroprotectors" RELATED [chebi] +xref: pubmed:23372317 {source="pubmed"} +xref: pubmed:28580190 {source="pubmed"} +xref: pubmed:30885572 {source="pubmed"} +xref: pubmed:33144142 {source="pubmed"} +xref: pubmed:33973253 {source="pubmed"} +xref: pubmed:34606237 {source="pubmed"} +xref: wikipedia.en:Geroprotector {source="wikipedia.en"} is_a: CHEBI:50267 ! protective agent [Term] id: CHEBI:17668 -name: ribonucleoside diphosphate +name: ribonucleoside diphosphat alt_id: CHEBI:15046 alt_id: CHEBI:26557 alt_id: CHEBI:8845 -subset: 3_STAR -synonym: "Ribonucleoside diphosphate" EXACT [KEGG_COMPOUND] -synonym: "ribonucleoside diphosphates" RELATED [ChEBI] -xref: KEGG:C03723 +subset: 3:STAR +synonym: "Ribonucleoside diphosphate" RELATED [kegg.compound] +synonym: "ribonucleoside diphosphates" RELATED [chebi] +xref: kegg.compound:C03723 {source="kegg.compound"} is_a: CHEBI:16862 ! nucleoside 5'-diphosphate [Term] @@ -3111,17 +3228,17 @@ alt_id: CHEBI:12487 alt_id: CHEBI:13954 alt_id: CHEBI:23074 alt_id: CHEBI:7242 -def: "Ceramides (N-acyl-sphingoid bases) are a major subclass of sphingoid base derivatives with an amide-linked fatty acid. The fatty acids are typically saturated or monounsaturated with chain lengths from 14 to 26 carbon atoms; the presence of a hydroxyl group on carbon 2 is fairly common. Ceramides are generally precursors of more complex sphingolipids. In the illustrated generalised structure, R(1) = OH, OX (where X = acyl, glycosyl, phosphate, phosphonate, etc.), or H." [] -subset: 3_STAR -synonym: "a ceramide" RELATED [UniProt] -synonym: "Cer" RELATED [CBN] -synonym: "Ceramide" EXACT [KEGG_COMPOUND] -synonym: "ceramides" RELATED [ChEBI] -synonym: "N-acylated sphingoid" RELATED [CBN] -xref: KEGG:C00195 -xref: LIPID_MAPS_class:LMSP02 {source="LIPID MAPS"} -xref: PMID:7542630 {source="Europe PMC"} -xref: Wikipedia:Ceramide +def: "Ceramides (N-acyl-sphingoid bases) are a major subclass of sphingoid base derivatives with an amide-linked fatty acid. The fatty acids are typically saturated or monounsaturated with chain lengths from 14 to 26 carbon atoms; the presence of a hydroxyl group on carbon 2 is fairly common. Ceramides are generally precursors of more complex sphingolipids. In the illustrated generalised structure, R1 = OH, OX (where X = acyl, glycosyl, phosphate, phosphonate, etc.), or H." [] +subset: 3:STAR +synonym: "a ceramide" RELATED [uniprot_ft] +synonym: "Cer" RELATED [iubmb] +synonym: "Ceramide" RELATED [kegg.compound] +synonym: "ceramides" RELATED [chebi] +synonym: "N-acylated sphingoid" RELATED [iubmb] +xref: kegg.compound:C00195 {source="kegg.compound"} +xref: lipidmaps_class:LMSP02 {source="lipidmaps_class"} +xref: pubmed:7542630 {source="pubmed"} +xref: wikipedia.en:Ceramide {source="wikipedia.en"} is_a: CHEBI:26739 ! sphingolipid is_a: CHEBI:37622 ! carboxamide @@ -3134,12 +3251,13 @@ alt_id: CHEBI:15163 alt_id: CHEBI:15164 alt_id: CHEBI:15165 def: "A single-stranded RNA molecule containing about 70-90 nucleotides, folded by intrastrand base pairing into a characteristic secondary ('cloverleaf') structure that carries a specific amino acid and matches it to its corresponding codon on an mRNA during protein synthesis." [] -subset: 3_STAR -synonym: "RNA, transfer" RELATED [ChemIDplus] -synonym: "transfer RNA" EXACT IUPAC_NAME [IUPAC, KEGG_COMPOUND] -synonym: "tRNA" RELATED [KEGG_COMPOUND, UniProt] -xref: CAS:9014-25-9 {source="ChemIDplus"} -xref: KEGG:C00066 +subset: 3:STAR +synonym: "RNA, transfer" RELATED [chemidplus] +synonym: "transfer RNA" EXACT IUPAC:NAME [IUPAC, KEGG_COMPOUND] +synonym: "transfer RNA" RELATED IUPAC:NAME [iupac, kegg.compound] +synonym: "tRNA" RELATED [kegg.compound, uniprot_ft] +xref: cas:9014-25-9 {source="cas"} +xref: kegg.compound:C00066 {source="kegg.compound"} is_a: CHEBI:33697 ! ribonucleic acid [Term] @@ -3148,11 +3266,11 @@ name: donor alt_id: CHEBI:14202 alt_id: CHEBI:4697 def: "A molecular entity that can transfer (\"donate\") an electron, a pair of electrons, an atom or a group to another molecular entity." [] -subset: 3_STAR -synonym: "Donator" RELATED [ChEBI] -synonym: "donneur" RELATED [ChEBI] -synonym: "Donor" EXACT [KEGG_COMPOUND] -xref: KEGG:C01351 +subset: 3:STAR +synonym: "Donator" RELATED [chebi] +synonym: "donneur" RELATED [chebi] +synonym: "Donor" RELATED [kegg.compound] +xref: kegg.compound:C01351 {source="kegg.compound"} is_a: CHEBI:51086 ! chemical role [Term] @@ -3163,52 +3281,55 @@ alt_id: CHEBI:21411 alt_id: CHEBI:46070 alt_id: CHEBI:46161 alt_id: CHEBI:6313 -def: "An optically active form of tyrosine having L-configuration." [] -subset: 3_STAR -synonym: "(-)-alpha-amino-p-hydroxyhydrocinnamic acid" RELATED [NIST_Chemistry_WebBook] -synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanoic acid" RELATED [IUPAC] -synonym: "(S)-(-)-Tyrosine" RELATED [HMDB] -synonym: "(S)-2-Amino-3-(p-hydroxyphenyl)propionic acid" RELATED [KEGG_COMPOUND] -synonym: "(S)-3-(p-Hydroxyphenyl)alanine" RELATED [KEGG_COMPOUND] -synonym: "(S)-alpha-amino-4-hydroxybenzenepropanoic acid" RELATED [NIST_Chemistry_WebBook] -synonym: "(S)-Tyrosine" RELATED [HMDB] -synonym: "4-hydroxy-L-phenylalanine" RELATED [NIST_Chemistry_WebBook] -synonym: "L-Tyrosin" RELATED [ChEBI] +def: "An optically active form of tyrosine having L-configuration." [] +subset: 3:STAR +synonym: "(-)-alpha-amino-p-hydroxyhydrocinnamic acid" RELATED [nist] +synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanoic acid" RELATED [iupac] +synonym: "(S)-(-)-Tyrosine" RELATED [hmdb] +synonym: "(S)-2-Amino-3-(p-hydroxyphenyl)propionic acid" RELATED [kegg.compound] +synonym: "(S)-3-(p-Hydroxyphenyl)alanine" RELATED [kegg.compound] +synonym: "(S)-alpha-amino-4-hydroxybenzenepropanoic acid" RELATED [nist] +synonym: "(S)-Tyrosine" RELATED [hmdb] +synonym: "4-hydroxy-L-phenylalanine" RELATED [nist] +synonym: "L-Tyrosin" RELATED [chebi] synonym: "L-Tyrosine" EXACT [KEGG_COMPOUND] -synonym: "L-tyrosine" EXACT IUPAC_NAME [IUPAC] -synonym: "Tyr" RELATED [ChEBI] -synonym: "TYROSINE" RELATED [PDBeChem] -synonym: "Tyrosine" RELATED [KEGG_COMPOUND] -synonym: "Y" RELATED [ChEBI] -xref: CAS:60-18-4 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:2786 {source="DrugCentral"} -xref: DrugBank:DB00135 -xref: ECMDB:ECMDB00158 -xref: Gmelin:50929 {source="Gmelin"} -xref: HMDB:HMDB0000158 -xref: KEGG:C00082 -xref: KEGG:D00022 -xref: KNApSAcK:C00001397 -xref: MetaCyc:TYR -xref: PDBeChem:TYR -xref: PMID:15171683 {source="Europe PMC"} -xref: PMID:22360849 {source="Europe PMC"} -xref: PMID:22402312 {source="Europe PMC"} -xref: Reaxys:392441 {source="Reaxys"} -xref: UM-BBD_compID:c0234 {source="UM-BBD"} -xref: Wikipedia:Tyrosine -xref: YMDB:YMDB00364 +synonym: "L-Tyrosine" RELATED [kegg.compound] +synonym: "L-tyrosine" EXACT IUPAC:NAME [IUPAC] +synonym: "L-tyrosine" RELATED IUPAC:NAME [iupac] +synonym: "Tyr" RELATED [chebi] +synonym: "TYROSINE" EXACT [PDBeChem] +synonym: "TYROSINE" RELATED [pdb-ccd] +synonym: "Tyrosine" RELATED [kegg.compound] +synonym: "Y" RELATED [chebi] +xref: cas:60-18-4 {source="cas"} +xref: drugbank:DB00135 {source="drugbank"} +xref: drugcentral:2786 {source="drugcentral"} +xref: ecmdb:ECMDB00158 {source="ecmdb"} +xref: gmelin:50929 {source="gmelin"} +xref: hmdb:HMDB0000158 {source="hmdb"} +xref: kegg.compound:C00082 {source="kegg.compound"} +xref: kegg.drug:D00022 {source="kegg.drug"} +xref: knapsack:C00001397 {source="knapsack"} +xref: metacyc.compound:TYR {source="metacyc.compound"} +xref: pdb-ccd:TYR {source="pdb-ccd"} +xref: pubmed:15171683 {source="pubmed"} +xref: pubmed:22360849 {source="pubmed"} +xref: pubmed:22402312 {source="pubmed"} +xref: reaxys:392441 {source="reaxys"} +xref: umbbd.compound:c0234 {source="umbbd.compound"} +xref: wikipedia.en:Tyrosine {source="wikipedia.en"} +xref: ymdb:YMDB00364 {source="ymdb"} is_a: CHEBI:18186 ! tyrosine is_a: CHEBI:73690 ! erythrose 4-phosphate/phosphoenolpyruvate family amino acid -relationship: has_functional_parent CHEBI:46209 ! L-tyrosinal -relationship: is_conjugate_acid_of CHEBI:32760 ! L-tyrosinate(1-) -relationship: is_conjugate_base_of CHEBI:32762 ! L-tyrosinium -relationship: is_enantiomer_of CHEBI:28479 ! D-tyrosine -relationship: is_tautomer_of CHEBI:58315 ! L-tyrosine zwitterion relationship: RO:0000087 CHEBI:27027 ! has role micronutrient relationship: RO:0000087 CHEBI:50733 ! has role nutraceutical relationship: RO:0000087 CHEBI:64416 ! has role EC 1.3.1.43 (arogenate dehydrogenase) inhibitor relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:32762 ! is deprotonated form of L-tyrosinium +relationship: RO:0018034 CHEBI:32760 ! is protonated form of L-tyrosinate(1-) +relationship: RO:0018036 CHEBI:58315 ! is tautomer of L-tyrosine zwitterion +relationship: RO:0018038 CHEBI:46209 ! has functional parent L-tyrosinal +relationship: RO:0018039 CHEBI:28479 ! is enantiomer of D-tyrosine [Term] id: CHEBI:17968 @@ -3216,34 +3337,34 @@ name: butyrate alt_id: CHEBI:13924 alt_id: CHEBI:22946 def: "A short-chain fatty acid anion that is the conjugate base of butyric acid, obtained by deprotonation of the carboxy group." [] -subset: 3_STAR -synonym: "1-butanoate" RELATED [ChEBI] -synonym: "1-butyrate" RELATED [ChEBI] -synonym: "1-propanecarboxylate" RELATED [ChEBI] -synonym: "butanate" RELATED [ChEBI] -synonym: "butanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "butanoate" RELATED [ChEBI, UniProt] -synonym: "butanoic acid, ion(1-)" RELATED [ChemIDplus] -synonym: "butyrate" EXACT [IUPAC] -synonym: "CH3-[CH2]2-COO(-)" RELATED [IUPAC] -synonym: "n-butanoate" RELATED [ChEBI] -synonym: "n-butyrate" RELATED [ChemIDplus] -synonym: "propanecarboxylate" RELATED [ChEBI] -synonym: "propylformate" RELATED [ChEBI] -xref: CAS:461-55-2 {source="ChemIDplus"} -xref: Gmelin:324289 {source="Gmelin"} -xref: KEGG:C00246 -xref: MetaCyc:BUTYRIC_ACID -xref: PMID:17190852 {source="Europe PMC"} -xref: PMID:7496326 {source="Europe PMC"} -xref: Reaxys:3601060 {source="Reaxys"} -xref: UM-BBD_compID:c0035 {source="UM-BBD"} +subset: 3:STAR +synonym: "1-butanoate" RELATED [chebi] +synonym: "1-butyrate" RELATED [chebi] +synonym: "1-propanecarboxylate" RELATED [chebi] +synonym: "butanate" RELATED [chebi] +synonym: "butanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "butanoate" RELATED IUPAC:NAME [chebi, iupac, uniprot_ft] +synonym: "butanoic acid, ion(1-)" RELATED [chemidplus] +synonym: "butyrate" RELATED [iupac] +synonym: "CH3-[CH2]2-COO(-)" RELATED [iupac] +synonym: "n-butanoate" RELATED [chebi] +synonym: "n-butyrate" RELATED [chemidplus] +synonym: "propanecarboxylate" RELATED [chebi] +synonym: "propylformate" RELATED [chebi] +xref: cas:461-55-2 {source="cas"} +xref: gmelin:324289 {source="gmelin"} +xref: kegg.compound:C00246 {source="kegg.compound"} +xref: metacyc.compound:BUTYRIC_ACID {source="metacyc.compound"} +xref: pubmed:17190852 {source="pubmed"} +xref: pubmed:7496326 {source="pubmed"} +xref: reaxys:3601060 {source="reaxys"} +xref: umbbd.compound:c0035 {source="umbbd.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:78115 ! fatty acid anion 4:0 -relationship: is_conjugate_base_of CHEBI:30772 ! butyric acid relationship: RO:0000087 CHEBI:25212 ! has role metabolite relationship: RO:0000087 CHEBI:61115 ! has role EC 3.5.1.98 (histone deacetylase) inhibitor relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:30772 ! is deprotonated form of butyric acid [Term] id: CHEBI:17972 @@ -3251,10 +3372,10 @@ name: ribonucleoside triphosphate alt_id: CHEBI:15047 alt_id: CHEBI:26559 alt_id: CHEBI:8846 -subset: 3_STAR -synonym: "Ribonucleoside triphosphate" EXACT [KEGG_COMPOUND] -synonym: "ribonucleoside triphosphates" RELATED [ChEBI] -xref: KEGG:C03802 +subset: 3:STAR +synonym: "Ribonucleoside triphosphate" RELATED [kegg.compound] +synonym: "ribonucleoside triphosphates" RELATED [chebi] +xref: kegg.compound:C03802 {source="kegg.compound"} is_a: CHEBI:17326 ! nucleoside 5'-triphoshate [Term] @@ -3264,10 +3385,11 @@ alt_id: CHEBI:14517 alt_id: CHEBI:25054 alt_id: CHEBI:6486 def: "'Lipids' is a loosely defined term for substances of biological origin that are soluble in nonpolar solvents. They consist of saponifiable lipids, such as glycerides (fats and oils) and phospholipids, as well as nonsaponifiable lipids, principally steroids." [] -subset: 3_STAR -synonym: "Lipid" EXACT [KEGG_COMPOUND] -synonym: "lipids" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C01356 +subset: 3:STAR +synonym: "Lipid" RELATED [kegg.compound] +synonym: "lipids" EXACT IUPAC:NAME [IUPAC] +synonym: "lipids" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C01356 {source="kegg.compound"} is_a: CHEBI:50860 ! organic molecular entity [Term] @@ -3277,15 +3399,17 @@ alt_id: CHEBI:14361 alt_id: CHEBI:24398 alt_id: CHEBI:5495 def: "Any polysaccharide containing a substantial proportion of aminomonosaccharide residues." [] -subset: 3_STAR -synonym: "glicosaminoglicano" RELATED [IUPAC] +subset: 3:STAR +synonym: "glicosaminoglicano" RELATED [iupac] synonym: "Glycosaminoglycan" EXACT [KEGG_COMPOUND] -synonym: "glycosaminoglycan" EXACT IUPAC_NAME [IUPAC] -synonym: "glycosaminoglycane" RELATED [IUPAC] -synonym: "glycosaminoglycans" RELATED [ChEBI] -synonym: "Glykosaminoglykan" RELATED [ChEBI] -xref: KEGG:C02545 -xref: Wikipedia:Glycosaminoglycan +synonym: "Glycosaminoglycan" RELATED [kegg.compound] +synonym: "glycosaminoglycan" EXACT IUPAC:NAME [IUPAC] +synonym: "glycosaminoglycan" RELATED IUPAC:NAME [iupac] +synonym: "glycosaminoglycane" RELATED [iupac] +synonym: "glycosaminoglycans" RELATED [chebi] +synonym: "Glykosaminoglykan" RELATED [chebi] +xref: kegg.compound:C02545 {source="kegg.compound"} +xref: wikipedia.en:Glycosaminoglycan {source="wikipedia.en"} is_a: CHEBI:22506 ! aminoglycan [Term] @@ -3295,13 +3419,12 @@ alt_id: CHEBI:14399 alt_id: CHEBI:24590 alt_id: CHEBI:5709 def: "Any six-carbon monosaccharide which in its linear form contains either an aldehyde group at position 1 (aldohexose) or a ketone group at position 2 (ketohexose)." [] -subset: 3_STAR -synonym: "Hexose" EXACT [KEGG_COMPOUND] -synonym: "hexoses" RELATED [ChEBI] -synonym: "WURCS=2.0/1,1,0/[axxxxh-1x_1-5_2*NCC/3=O]/1/" RELATED [GlyTouCan] -xref: GlyGen:G70994MS -xref: GlyTouCan:G70994MS -xref: KEGG:C00738 +subset: 3:STAR +synonym: "Hexose" RELATED [kegg.compound] +synonym: "hexoses" RELATED [chebi] +xref: glygen:G70994MS {source="glygen"} +xref: glytoucan:G70994MS {source="glytoucan"} +xref: kegg.compound:C00738 {source="kegg.compound"} is_a: CHEBI:35381 ! monosaccharide [Term] @@ -3311,17 +3434,18 @@ alt_id: CHEBI:14864 alt_id: CHEBI:26205 alt_id: CHEBI:8322 def: "A biomacromolecule consisting of large numbers of monosaccharide residues linked glycosidically. This term is commonly used only for those containing more than ten monosaccharide residues." [] -subset: 3_STAR -synonym: "Glycan" RELATED [KEGG_COMPOUND] -synonym: "Glycane" RELATED [ChEBI] -synonym: "glycans" RELATED [IUPAC] -synonym: "Glykan" RELATED [ChEBI] -synonym: "Glykane" RELATED [ChEBI] -synonym: "polisacarido" RELATED [ChEBI] -synonym: "polisacaridos" RELATED [IUPAC] -synonym: "Polysaccharide" EXACT [KEGG_COMPOUND] -synonym: "polysaccharides" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C00420 +subset: 3:STAR +synonym: "Glycan" RELATED [kegg.compound] +synonym: "Glycane" RELATED [chebi] +synonym: "glycans" RELATED [iupac] +synonym: "Glykan" RELATED [chebi] +synonym: "Glykane" RELATED [chebi] +synonym: "polisacarido" RELATED [chebi] +synonym: "polisacaridos" RELATED [iupac] +synonym: "Polysaccharide" RELATED [kegg.compound] +synonym: "polysaccharides" EXACT IUPAC:NAME [IUPAC] +synonym: "polysaccharides" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C00420 {source="kegg.compound"} is_a: CHEBI:16646 ! carbohydrate is_a: CHEBI:167559 ! glycan is_a: CHEBI:33694 ! biomacromolecule @@ -3332,68 +3456,72 @@ name: tyrosine alt_id: CHEBI:15277 alt_id: CHEBI:27176 alt_id: CHEBI:9800 -def: "An alpha-amino acid that is phenylalanine bearing a hydroxy substituent at position 4 on the phenyl ring." [] -subset: 3_STAR -synonym: "2-amino-3-(4-hydroxyphenyl)propanoic acid" RELATED [IUPAC] -synonym: "2-Amino-3-(p-hydroxyphenyl)propionic acid" RELATED [KEGG_COMPOUND] -synonym: "3-(p-Hydroxyphenyl)alanine" RELATED [KEGG_COMPOUND] -synonym: "tirosina" RELATED [ChEBI] -synonym: "Tyr" RELATED [ChEBI] -synonym: "Tyrosin" RELATED [ChEBI] +def: "An α-amino acid that is phenylalanine bearing a hydroxy substituent at position 4 on the phenyl ring." [] +subset: 3:STAR +synonym: "2-amino-3-(4-hydroxyphenyl)propanoic acid" RELATED [iupac] +synonym: "2-Amino-3-(p-hydroxyphenyl)propionic acid" RELATED [kegg.compound] +synonym: "3-(p-Hydroxyphenyl)alanine" RELATED [kegg.compound] +synonym: "tirosina" RELATED [chebi] +synonym: "Tyr" RELATED [chebi] +synonym: "Tyrosin" RELATED [chebi] synonym: "Tyrosine" EXACT [KEGG_COMPOUND] -synonym: "tyrosine" EXACT IUPAC_NAME [IUPAC] -synonym: "Y" RELATED [ChEBI] -xref: CAS:55520-40-6 {source="ChemIDplus"} -xref: CAS:556-03-6 {source="KEGG COMPOUND"} -xref: Gmelin:27744 {source="Gmelin"} -xref: KEGG:C01536 -xref: KNApSAcK:C00001397 -xref: PMID:17190852 {source="Europe PMC"} -xref: Reaxys:515881 {source="Reaxys"} +synonym: "Tyrosine" RELATED [kegg.compound] +synonym: "tyrosine" EXACT IUPAC:NAME [IUPAC] +synonym: "tyrosine" RELATED IUPAC:NAME [iupac] +synonym: "Y" RELATED [chebi] +xref: cas:55520-40-6 {source="cas"} +xref: cas:556-03-6 {source="cas"} +xref: gmelin:27744 {source="gmelin"} +xref: kegg.compound:C01536 {source="kegg.compound"} +xref: knapsack:C00001397 {source="knapsack"} +xref: pubmed:17190852 {source="pubmed"} +xref: reaxys:515881 {source="reaxys"} is_a: CHEBI:26167 ! polar amino acid is_a: CHEBI:33704 ! alpha-amino acid is_a: CHEBI:33856 ! aromatic amino acid -relationship: has_functional_parent CHEBI:30768 ! propionic acid relationship: has_part CHEBI:50336 ! 4-hydroxybenzyl group -relationship: is_conjugate_acid_of CHEBI:32784 ! tyrosinate(1-) -relationship: is_conjugate_base_of CHEBI:32786 ! tyrosinium relationship: RO:0000087 CHEBI:83056 ! has role Daphnia magna metabolite +relationship: RO:0018033 CHEBI:32786 ! is deprotonated form of tyrosinium +relationship: RO:0018034 CHEBI:32784 ! is protonated form of tyrosinate(1-) +relationship: RO:0018038 CHEBI:30768 ! has functional parent propionic acid [Term] id: CHEBI:18237 name: glutamic acid alt_id: CHEBI:24314 alt_id: CHEBI:5431 -def: "An alpha-amino acid that is glutaric acid bearing a single amino substituent at position 2." [] -subset: 3_STAR -synonym: "2-Aminoglutaric acid" RELATED [KEGG_COMPOUND] -synonym: "2-aminopentanedioic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "DL-Glutamic acid" RELATED [KEGG_DRUG] -synonym: "DL-Glutaminic acid" RELATED [KEGG_COMPOUND] -synonym: "E" RELATED [ChEBI] -synonym: "Glu" RELATED [ChEBI] -synonym: "Glutamate" RELATED [KEGG_COMPOUND] -synonym: "Glutamic acid" EXACT [KEGG_COMPOUND] -synonym: "glutamic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "Glutaminic acid" RELATED [KEGG_COMPOUND] -synonym: "Glutaminsaeure" RELATED [ChEBI] -xref: CAS:617-65-2 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Gmelin:101971 {source="Gmelin"} -xref: KEGG:C00302 -xref: KEGG:D04341 -xref: KNApSAcK:C00001358 -xref: KNApSAcK:C00019577 -xref: PMID:15739367 {source="Europe PMC"} -xref: PMID:17190852 {source="Europe PMC"} -xref: PMID:24616376 {source="Europe PMC"} -xref: PMID:24984001 {source="Europe PMC"} -xref: Reaxys:1723799 {source="Reaxys"} -xref: Wikipedia:Glutamic_acid +def: "An α-amino acid that is glutaric acid bearing a single amino substituent at position 2." [] +subset: 3:STAR +synonym: "2-Aminoglutaric acid" RELATED [kegg.compound] +synonym: "2-aminopentanedioic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "2-aminopentanedioic acid" RELATED IUPAC:NAME [iupac] +synonym: "DL-Glutamic acid" RELATED [kegg.drug] +synonym: "DL-Glutaminic acid" RELATED [kegg.compound] +synonym: "E" RELATED [chebi] +synonym: "Glu" RELATED [chebi] +synonym: "Glutamate" RELATED [kegg.compound] +synonym: "Glutamic acid" RELATED [kegg.compound] +synonym: "glutamic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "glutamic acid" RELATED IUPAC:NAME [iupac] +synonym: "Glutaminic acid" RELATED [kegg.compound] +synonym: "Glutaminsaeure" RELATED [chebi] +xref: cas:617-65-2 {source="cas"} +xref: gmelin:101971 {source="gmelin"} +xref: kegg.compound:C00302 {source="kegg.compound"} +xref: kegg.drug:D04341 {source="kegg.drug"} +xref: knapsack:C00001358 {source="knapsack"} +xref: knapsack:C00019577 {source="knapsack"} +xref: pubmed:15739367 {source="pubmed"} +xref: pubmed:17190852 {source="pubmed"} +xref: pubmed:24616376 {source="pubmed"} +xref: pubmed:24984001 {source="pubmed"} +xref: reaxys:1723799 {source="reaxys"} +xref: wikipedia.en:Glutamic_acid {source="wikipedia.en"} is_a: CHEBI:26167 ! polar amino acid is_a: CHEBI:33704 ! alpha-amino acid relationship: has_part CHEBI:50329 ! 2-carboxyethyl group -relationship: is_conjugate_acid_of CHEBI:14321 ! glutamate(1-) relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018034 CHEBI:14321 ! is protonated form of glutamate(1-) [Term] id: CHEBI:18243 @@ -3405,39 +3533,40 @@ alt_id: CHEBI:1764 alt_id: CHEBI:23886 alt_id: CHEBI:43686 def: "Catechol in which the hydrogen at position 4 is substituted by a 2-aminoethyl group." [] -subset: 3_STAR -synonym: "2-(3,4-Dihydroxyphenyl)ethylamine" RELATED [KEGG_COMPOUND] -synonym: "2-(3,4-dihydroxyphenyl)ethylamine" RELATED [ChEBI] -synonym: "3,4-Dihydroxyphenethylamine" RELATED [KEGG_COMPOUND] -synonym: "3-Hydroxytyramine" RELATED [ChemIDplus] -synonym: "4-(2-Aminoethyl)-1,2-benzenediol" RELATED [KEGG_COMPOUND] -synonym: "4-(2-aminoethyl)-1,2-benzenediol" RELATED [ChEBI] -synonym: "4-(2-Aminoethyl)benzene-1,2-diol" RELATED [KEGG_COMPOUND] -synonym: "4-(2-aminoethyl)benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "4-(2-aminoethyl)catechol" RELATED [ChemIDplus] -synonym: "4-(2-aminoethyl)pyrocatechol" RELATED [ChemIDplus] -synonym: "Deoxyepinephrine" RELATED [DrugBank] -synonym: "dopamina" RELATED INN [ChemIDplus] -synonym: "Dopamine" EXACT [KEGG_COMPOUND] -synonym: "dopamine" RELATED INN [ChEBI] -synonym: "dopaminum" RELATED INN [ChemIDplus] -synonym: "Hydroxytyramin" RELATED [DrugBank] -xref: CAS:51-61-6 {source="ChemIDplus"} -xref: Drug_Central:947 {source="DrugCentral"} -xref: DrugBank:DB00988 -xref: HMDB:HMDB0000073 -xref: KEGG:C03758 -xref: KEGG:D07870 -xref: KNApSAcK:C00001408 -xref: LINCS:LSM-4630 -xref: MetaCyc:DOPAMINE -xref: PMID:10629745 {source="Europe PMC"} -xref: PMID:11149432 {source="Europe PMC"} -xref: PMID:9422813 {source="Europe PMC"} -xref: Reaxys:1072822 {source="Reaxys"} -xref: Wikipedia:Dopamine +subset: 3:STAR +synonym: "2-(3,4-Dihydroxyphenyl)ethylamine" RELATED [kegg.compound] +synonym: "2-(3,4-dihydroxyphenyl)ethylamine" RELATED [chebi] +synonym: "3,4-Dihydroxyphenethylamine" RELATED [kegg.compound] +synonym: "3-Hydroxytyramine" RELATED [chemidplus] +synonym: "4-(2-Aminoethyl)-1,2-benzenediol" RELATED [kegg.compound] +synonym: "4-(2-aminoethyl)-1,2-benzenediol" RELATED [chebi] +synonym: "4-(2-Aminoethyl)benzene-1,2-diol" EXACT [KEGG_COMPOUND] +synonym: "4-(2-Aminoethyl)benzene-1,2-diol" RELATED [kegg.compound] +synonym: "4-(2-aminoethyl)benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-(2-aminoethyl)benzene-1,2-diol" RELATED IUPAC:NAME [iupac] +synonym: "4-(2-aminoethyl)catechol" RELATED [chemidplus] +synonym: "4-(2-aminoethyl)pyrocatechol" RELATED [chemidplus] +synonym: "Deoxyepinephrine" RELATED [drugbank] +synonym: "dopamina" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Dopamine" RELATED [kegg.compound] +synonym: "dopamine" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +synonym: "dopaminum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Hydroxytyramin" RELATED [drugbank] +xref: cas:51-61-6 {source="cas"} +xref: drugbank:DB00988 {source="drugbank"} +xref: drugcentral:947 {source="drugcentral"} +xref: hmdb:HMDB0000073 {source="hmdb"} +xref: kegg.compound:C03758 {source="kegg.compound"} +xref: kegg.drug:D07870 {source="kegg.drug"} +xref: knapsack:C00001408 {source="knapsack"} +xref: lincs.smallmolecule:LSM-4630 {source="lincs.smallmolecule"} +xref: metacyc.compound:DOPAMINE {source="metacyc.compound"} +xref: pubmed:10629745 {source="pubmed"} +xref: pubmed:11149432 {source="pubmed"} +xref: pubmed:9422813 {source="pubmed"} +xref: reaxys:1072822 {source="reaxys"} +xref: wikipedia.en:Dopamine {source="wikipedia.en"} is_a: CHEBI:33567 ! catecholamine -relationship: is_conjugate_base_of CHEBI:59905 ! dopaminium(1+) relationship: RO:0000087 CHEBI:35522 ! has role beta-adrenergic agonist relationship: RO:0000087 CHEBI:35524 ! has role sympathomimetic agent relationship: RO:0000087 CHEBI:38147 ! has role cardiotonic drug @@ -3445,6 +3574,7 @@ relationship: RO:0000087 CHEBI:48560 ! has role dopaminergic agent relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:59905 ! is deprotonated form of dopaminium(1+) [Term] id: CHEBI:18246 @@ -3452,20 +3582,22 @@ name: (1->4)-beta-D-glucan alt_id: CHEBI:10812 alt_id: CHEBI:23063 alt_id: CHEBI:3529 -def: "A beta-D-glucan in which the glucose units are connected by (1->4) linkages." [] -subset: 3_STAR -synonym: "(1,4-beta-D-Glucosyl)n" RELATED [KEGG_COMPOUND] -synonym: "(1,4-beta-D-glucosyl)n" RELATED [IUBMB, UniProt] -synonym: "(1,4-beta-D-Glucosyl)n+1" RELATED [KEGG_COMPOUND] -synonym: "(1,4-beta-D-Glucosyl)n-1" RELATED [KEGG_COMPOUND] -synonym: "(1->4)-beta-D-glucopyranan" EXACT IUPAC_NAME [IUPAC] -synonym: "1,4-beta-D-Glucan" RELATED [KEGG_COMPOUND] -synonym: "Cellulose" RELATED [KEGG_COMPOUND] -xref: CAS:9004-34-6 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: HMDB:HMDB0006944 -xref: KEGG:C00760 -xref: KEGG:D00093 -xref: KEGG:G10481 +def: "A β-D-glucan in which the glucose units are connected by (1→4) linkages." [] +subset: 3:STAR +synonym: "(1,4-beta-D-glucosyl)(n)" RELATED [uniprot_ft] +synonym: "(1,4-beta-D-Glucosyl)n" RELATED [kegg.compound] +synonym: "(1,4-beta-D-glucosyl)n" RELATED [iubmb] +synonym: "(1,4-beta-D-Glucosyl)n+1" RELATED [kegg.compound] +synonym: "(1,4-beta-D-Glucosyl)n-1" RELATED [kegg.compound] +synonym: "(1->4)-beta-D-glucopyranan" EXACT IUPAC:NAME [IUPAC] +synonym: "(1->4)-beta-D-glucopyranan" RELATED IUPAC:NAME [iupac] +synonym: "1,4-beta-D-Glucan" RELATED [kegg.compound] +synonym: "Cellulose" RELATED [kegg.compound] +xref: cas:9004-34-6 {source="cas"} +xref: hmdb:HMDB0006944 {source="hmdb"} +xref: kegg.compound:C00760 {source="kegg.compound"} +xref: kegg.drug:D00093 {source="kegg.drug"} +xref: kegg.glycan:G10481 {source="kegg.glycan"} is_a: CHEBI:28793 ! beta-D-glucan [Term] @@ -3475,22 +3607,23 @@ alt_id: CHEBI:13322 alt_id: CHEBI:24872 alt_id: CHEBI:5974 def: "An iron group element atom that has atomic number 26." [] -subset: 3_STAR -synonym: "26Fe" RELATED [IUPAC] -synonym: "Eisen" RELATED [ChEBI] -synonym: "Fe" RELATED [IUPAC, UniProt] -synonym: "fer" RELATED [ChEBI] -synonym: "ferrum" RELATED [IUPAC] -synonym: "hierro" RELATED [ChEBI] -synonym: "Iron" RELATED [KEGG_COMPOUND] -synonym: "iron" EXACT IUPAC_NAME [IUPAC] -synonym: "iron" RELATED [ChEBI] -xref: CAS:7439-89-6 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB01592 -xref: HMDB:HMDB0015531 -xref: KEGG:C00023 -xref: Reaxys:4122945 {source="Reaxys"} -xref: WebElements:Fe +subset: 3:STAR +synonym: "26Fe" RELATED [iupac] +synonym: "Eisen" RELATED [chebi] +synonym: "Fe" RELATED [iupac, uniprot_ft] +synonym: "fer" RELATED [chebi] +synonym: "ferrum" RELATED [iupac] +synonym: "hierro" RELATED [chebi] +synonym: "Iron" EXACT [KEGG_COMPOUND] +synonym: "Iron" RELATED [kegg.compound] +synonym: "iron" EXACT IUPAC:NAME [IUPAC] +synonym: "iron" RELATED IUPAC:NAME [chebi, iupac] +xref: cas:7439-89-6 {source="cas"} +xref: drugbank:DB01592 {source="drugbank"} +xref: hmdb:HMDB0015531 {source="hmdb"} +xref: kegg.compound:C00023 {source="kegg.compound"} +xref: reaxys:4122945 {source="reaxys"} +xref: webelements:Fe {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33356 ! iron group element atom relationship: RO:0000087 CHEBI:27027 ! has role micronutrient @@ -3506,12 +3639,12 @@ alt_id: CHEBI:21085 alt_id: CHEBI:26560 alt_id: CHEBI:4240 alt_id: CHEBI:8844 -def: "Any nucleoside where the sugar component is D-ribose." [] -subset: 3_STAR -synonym: "a ribonucleoside" RELATED [UniProt] -synonym: "Ribonucleoside" EXACT [KEGG_COMPOUND] -synonym: "ribonucleosides" RELATED [ChEBI] -xref: KEGG:C00911 +def: "Any nucleoside where the sugar component is D-ribose." [] +subset: 3:STAR +synonym: "a ribonucleoside" RELATED [uniprot_ft] +synonym: "Ribonucleoside" RELATED [kegg.compound] +synonym: "ribonucleosides" RELATED [chebi] +xref: kegg.compound:C00911 {source="kegg.compound"} is_a: CHEBI:33838 ! nucleoside is_a: CHEBI:47019 ! dihydroxytetrahydrofuran @@ -3522,11 +3655,12 @@ alt_id: CHEBI:13873 alt_id: CHEBI:25598 alt_id: CHEBI:2995 def: "That part of DNA or RNA that may be involved in pairing." [] -subset: 3_STAR -synonym: "Base" RELATED [KEGG_COMPOUND] -synonym: "nucleobases" RELATED [ChEBI] -xref: KEGG:C00701 -xref: Wikipedia:Nucleobase +subset: 3:STAR +synonym: "Base" EXACT [KEGG_COMPOUND] +synonym: "Base" RELATED [kegg.compound] +synonym: "nucleobases" RELATED [chebi] +xref: kegg.compound:C00701 {source="kegg.compound"} +xref: wikipedia.en:Nucleobase {source="wikipedia.en"} is_a: CHEBI:38101 ! organonitrogen heterocyclic compound [Term] @@ -3536,35 +3670,36 @@ alt_id: CHEBI:14401 alt_id: CHEBI:24596 alt_id: CHEBI:43187 alt_id: CHEBI:817 -def: "A member of the class of imidazoles that is 1H-imidazole substituted at position C-4 by a 2-aminoethyl group." [] -subset: 3_STAR -synonym: "1H-Imidazole-4-ethanamine" RELATED [KEGG_COMPOUND] -synonym: "2-(1H-imidazol-4-yl)ethanamine" EXACT IUPAC_NAME [IUPAC] -synonym: "2-(4-Imidazolyl)ethylamine" RELATED [KEGG_COMPOUND] -synonym: "HISTAMINE" EXACT [PDBeChem] -synonym: "Histamine" EXACT [KEGG_COMPOUND] -xref: CAS:51-45-6 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:1375 {source="DrugCentral"} -xref: Gmelin:2968 {source="Gmelin"} -xref: HMDB:HMDB0000870 -xref: KEGG:C00388 -xref: KEGG:D08040 -xref: KNApSAcK:C00001414 -xref: MetaCyc:HISTAMINE -xref: PDBeChem:HSM -xref: PMID:16399866 {source="Europe PMC"} -xref: PMID:19547708 {source="Europe PMC"} -xref: PMID:19843401 {source="Europe PMC"} -xref: PMID:22770225 {source="Europe PMC"} -xref: PMID:24101735 {source="Europe PMC"} -xref: Reaxys:2012 {source="Reaxys"} -xref: Wikipedia:Histamine +def: "A member of the class of imidazoles that is 1H-imidazole substituted at position C-4 by a 2-aminoethyl group." [] +subset: 3:STAR +synonym: "1H-Imidazole-4-ethanamine" RELATED [kegg.compound] +synonym: "2-(1H-imidazol-4-yl)ethanamine" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(1H-imidazol-4-yl)ethanamine" RELATED IUPAC:NAME [iupac] +synonym: "2-(4-Imidazolyl)ethylamine" RELATED [kegg.compound] +synonym: "HISTAMINE" RELATED [pdb-ccd] +synonym: "Histamine" RELATED [kegg.compound] +xref: cas:51-45-6 {source="cas"} +xref: drugcentral:1375 {source="drugcentral"} +xref: gmelin:2968 {source="gmelin"} +xref: hmdb:HMDB0000870 {source="hmdb"} +xref: kegg.compound:C00388 {source="kegg.compound"} +xref: kegg.drug:D08040 {source="kegg.drug"} +xref: knapsack:C00001414 {source="knapsack"} +xref: metacyc.compound:HISTAMINE {source="metacyc.compound"} +xref: pdb-ccd:HSM {source="pdb-ccd"} +xref: pubmed:16399866 {source="pubmed"} +xref: pubmed:19547708 {source="pubmed"} +xref: pubmed:19843401 {source="pubmed"} +xref: pubmed:22770225 {source="pubmed"} +xref: pubmed:24101735 {source="pubmed"} +xref: reaxys:2012 {source="reaxys"} +xref: wikipedia.en:Histamine {source="wikipedia.en"} is_a: CHEBI:24780 ! imidazoles is_a: CHEBI:64365 ! aralkylamino compound -relationship: is_conjugate_base_of CHEBI:58432 ! histaminium relationship: RO:0000087 CHEBI:25512 ! has role neurotransmitter relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:58432 ! is deprotonated form of histaminium [Term] id: CHEBI:18310 @@ -3572,19 +3707,22 @@ name: alkane alt_id: CHEBI:13435 alt_id: CHEBI:22317 alt_id: CHEBI:2576 -def: "An acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2, and therefore consisting entirely of hydrogen atoms and saturated carbon atoms." [] -subset: 3_STAR -synonym: "alcane" RELATED [IUPAC] -synonym: "alcanes" RELATED [IUPAC] -synonym: "alcano" RELATED [IUPAC] -synonym: "alcanos" RELATED [IUPAC] -synonym: "Alkan" RELATED [ChEBI] +def: "An acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2, and therefore consisting entirely of hydrogen atoms and saturated carbon atoms." [] +subset: 3:STAR +synonym: "alcane" RELATED [iupac] +synonym: "alcanes" RELATED [iupac] +synonym: "alcano" RELATED [iupac] +synonym: "alcanos" RELATED [iupac] +synonym: "Alkan" RELATED [chebi] synonym: "Alkane" EXACT [KEGG_COMPOUND] -synonym: "alkane" EXACT IUPAC_NAME [IUPAC] -synonym: "alkanes" EXACT IUPAC_NAME [IUPAC] -synonym: "an alkane" RELATED [UniProt] -synonym: "RH" RELATED [KEGG_COMPOUND] -xref: KEGG:C01371 +synonym: "Alkane" RELATED [kegg.compound] +synonym: "alkane" EXACT IUPAC:NAME [IUPAC] +synonym: "alkane" RELATED IUPAC:NAME [iupac] +synonym: "alkanes" EXACT IUPAC:NAME [IUPAC] +synonym: "alkanes" RELATED IUPAC:NAME [iupac] +synonym: "an alkane" RELATED [uniprot_ft] +synonym: "RH" RELATED [kegg.compound] +xref: kegg.compound:C01371 {source="kegg.compound"} is_a: CHEBI:24632 ! hydrocarbon is_a: CHEBI:33653 ! aliphatic compound @@ -3596,43 +3734,44 @@ alt_id: CHEBI:14668 alt_id: CHEBI:25592 alt_id: CHEBI:258884 alt_id: CHEBI:43725 -def: "The R-enantiomer of noradrenaline." [] -subset: 3_STAR -synonym: "(-)-arterenol" RELATED [ChemIDplus] -synonym: "(-)-noradrenaline" RELATED [IUPHAR] -synonym: "(-)-norepinephrine" RELATED [ChemIDplus] -synonym: "(R)-(-)-norepinephrine" RELATED [ChemIDplus] -synonym: "(R)-4-(2-amino-1-hydroxyethyl)-1,2-benzenediol" RELATED [ChemIDplus] -synonym: "(R)-norepinephrine" RELATED [ChemIDplus] -synonym: "4-[(1R)-2-Amino-1-hydroxyethyl]-1,2-benzenediol" RELATED [KEGG_COMPOUND] -synonym: "4-[(1R)-2-amino-1-hydroxyethyl]benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "Arterenol" RELATED [KEGG_COMPOUND] -synonym: "L-Noradrenaline" RELATED [KEGG_COMPOUND] -synonym: "L-NOREPINEPHRINE" RELATED [PDBeChem] -synonym: "Noradrenaline" RELATED [KEGG_COMPOUND] -synonym: "norepinefrina" RELATED INN [ChEBI] -synonym: "Norepinephrine" RELATED [KEGG_COMPOUND] -synonym: "norepinephrine" RELATED INN [ChemIDplus, WHO_MedNet] -synonym: "norepinephrinum" RELATED INN [ChEBI] -xref: Beilstein:4231961 {source="ChemIDplus"} -xref: CAS:51-41-2 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:1960 {source="DrugCentral"} -xref: DrugBank:DB00368 -xref: HMDB:HMDB0000216 -xref: KEGG:C00547 -xref: KEGG:D00076 -xref: KNApSAcK:C00001424 -xref: PDBeChem:LNR -xref: Reaxys:2804840 {source="Reaxys"} -xref: Wikipedia:Norepinephrine +def: "The R-enantiomer of noradrenaline." [] +subset: 3:STAR +synonym: "(-)-arterenol" RELATED [chemidplus] +synonym: "(-)-noradrenaline" RELATED [iuphar] +synonym: "(-)-norepinephrine" RELATED [chemidplus] +synonym: "(R)-(-)-norepinephrine" RELATED [chemidplus] +synonym: "(R)-4-(2-amino-1-hydroxyethyl)-1,2-benzenediol" RELATED [chemidplus] +synonym: "(R)-norepinephrine" RELATED [chemidplus] +synonym: "4-[(1R)-2-Amino-1-hydroxyethyl]-1,2-benzenediol" RELATED [kegg.compound] +synonym: "4-[(1R)-2-amino-1-hydroxyethyl]benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-[(1R)-2-amino-1-hydroxyethyl]benzene-1,2-diol" RELATED IUPAC:NAME [iupac] +synonym: "Arterenol" RELATED [kegg.compound] +synonym: "L-Noradrenaline" RELATED [kegg.compound] +synonym: "L-NOREPINEPHRINE" RELATED [pdb-ccd] +synonym: "Noradrenaline" RELATED [kegg.compound] +synonym: "norepinefrina" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +synonym: "Norepinephrine" RELATED [kegg.compound] +synonym: "norepinephrine" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus, who_mednet] +synonym: "norepinephrinum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi] +xref: beilstein:4231961 {source="beilstein"} +xref: cas:51-41-2 {source="cas"} +xref: drugbank:DB00368 {source="drugbank"} +xref: drugcentral:1960 {source="drugcentral"} +xref: hmdb:HMDB0000216 {source="hmdb"} +xref: kegg.compound:C00547 {source="kegg.compound"} +xref: kegg.drug:D00076 {source="kegg.drug"} +xref: knapsack:C00001424 {source="knapsack"} +xref: pdb-ccd:LNR {source="pdb-ccd"} +xref: reaxys:2804840 {source="reaxys"} +xref: wikipedia.en:Norepinephrine {source="wikipedia.en"} is_a: CHEBI:33569 ! noradrenaline -relationship: is_conjugate_base_of CHEBI:72587 ! (R)-noradrenaline(1+) -relationship: is_enantiomer_of CHEBI:33571 ! (S)-noradrenaline relationship: RO:0000087 CHEBI:25512 ! has role neurotransmitter relationship: RO:0000087 CHEBI:35524 ! has role sympathomimetic agent relationship: RO:0000087 CHEBI:35569 ! has role alpha-adrenergic agonist relationship: RO:0000087 CHEBI:50514 ! has role vasoconstrictor agent relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018033 CHEBI:72587 ! is deprotonated form of (R)-noradrenaline(1+) +relationship: RO:0018039 CHEBI:33571 ! is enantiomer of (S)-noradrenaline [Term] id: CHEBI:18367 @@ -3641,32 +3780,37 @@ alt_id: CHEBI:14791 alt_id: CHEBI:45024 alt_id: CHEBI:7793 def: "A phosphate ion that is the conjugate base of hydrogenphosphate." [] -subset: 3_STAR -synonym: "[PO4](3-)" RELATED [IUPAC] -synonym: "Orthophosphate" RELATED [KEGG_COMPOUND] -synonym: "Phosphate" RELATED [KEGG_COMPOUND] -synonym: "phosphate" EXACT IUPAC_NAME [IUPAC] -synonym: "PHOSPHATE ION" RELATED [PDBeChem] -synonym: "PO4(3-)" RELATED [IUPAC] -synonym: "tetraoxidophosphate(3-)" EXACT IUPAC_NAME [IUPAC] -synonym: "tetraoxophosphate(3-)" EXACT IUPAC_NAME [IUPAC] -synonym: "tetraoxophosphate(V)" EXACT IUPAC_NAME [IUPAC] -xref: CAS:14265-44-2 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Gmelin:1997 {source="Gmelin"} -xref: KEGG:C00009 -xref: PDBeChem:PO4 -xref: Reaxys:3903772 {source="Reaxys"} -xref: Wikipedia:Phosphate +subset: 3:STAR +synonym: "[PO4](3-)" RELATED [iupac] +synonym: "Orthophosphate" RELATED [kegg.compound] +synonym: "Phosphate" EXACT [KEGG_COMPOUND] +synonym: "Phosphate" RELATED [kegg.compound] +synonym: "phosphate" EXACT IUPAC:NAME [IUPAC] +synonym: "phosphate" RELATED IUPAC:NAME [iupac] +synonym: "PHOSPHATE ION" RELATED [pdb-ccd] +synonym: "PO4(3-)" RELATED [iupac] +synonym: "tetraoxidophosphate(3-)" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxidophosphate(3-)" RELATED IUPAC:NAME [iupac] +synonym: "tetraoxophosphate(3-)" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxophosphate(3-)" RELATED IUPAC:NAME [iupac] +synonym: "tetraoxophosphate(V)" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxophosphate(V)" RELATED IUPAC:NAME [iupac] +xref: cas:14265-44-2 {source="cas"} +xref: gmelin:1997 {source="gmelin"} +xref: kegg.compound:C00009 {source="kegg.compound"} +xref: pdb-ccd:PO4 {source="pdb-ccd"} +xref: reaxys:3903772 {source="reaxys"} +xref: wikipedia.en:Phosphate {source="wikipedia.en"} is_a: CHEBI:35780 ! phosphate ion is_a: CHEBI:79387 ! trivalent inorganic anion -relationship: is_conjugate_base_of CHEBI:43474 ! hydrogenphosphate +relationship: RO:0018033 CHEBI:43474 ! is deprotonated form of hydrogenphosphate [Term] id: CHEBI:190295 name: inorganic calcium salt def: "A calcium salt that lacks C-H bonds" [] -subset: 2_STAR -xref: PMID:28457049 {source="SUBMITTER"} +subset: 2:STAR +xref: pubmed:28457049 {source="pubmed"} is_a: CHEBI:167164 ! mineral nutrient is_a: CHEBI:24839 ! inorganic salt @@ -3674,64 +3818,67 @@ is_a: CHEBI:24839 ! inorganic salt id: CHEBI:194548 name: 4-[1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol def: "A catecholamine in which the aminoethyl side-chain is hydroxy-substituted at C-1 and methylated on nitrogen." [] -subset: 3_STAR -synonym: "4-[1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "4-[1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-[1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33567 ! catecholamine [Term] id: CHEBI:20664 name: 5beta-cholane -subset: 3_STAR -synonym: "5beta-cholane" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:2048472 {source="Beilstein"} +subset: 3:STAR +synonym: "5beta-cholane" EXACT IUPAC:NAME [IUPAC] +synonym: "5beta-cholane" RELATED IUPAC:NAME [iupac] +xref: beilstein:2048472 {source="beilstein"} is_a: CHEBI:35519 ! cholane [Term] id: CHEBI:20706 name: 6-aminopurines def: "Any compound having 6-aminopurine (adenine) as part of its structure." [] -subset: 3_STAR -synonym: "6-aminopurines" EXACT [ChEBI] -xref: PMID:1646334 {source="Europe PMC"} -xref: PMID:18524423 {source="Europe PMC"} -xref: PMID:7342604 {source="Europe PMC"} +subset: 3:STAR +synonym: "6-aminopurines" RELATED [chebi] +xref: pubmed:1646334 {source="pubmed"} +xref: pubmed:18524423 {source="pubmed"} +xref: pubmed:7342604 {source="pubmed"} is_a: CHEBI:22527 ! aminopurine [Term] id: CHEBI:21638 name: N-acylglucosamine -subset: 3_STAR -synonym: "N-acylglucosamine" EXACT [ChEBI] -synonym: "N-acylglucosamines" RELATED [ChEBI] +subset: 3:STAR +synonym: "N-acylglucosamine" RELATED [chebi] +synonym: "N-acylglucosamines" RELATED [chebi] is_a: CHEBI:21656 ! N-acyl-hexosamine is_a: CHEBI:24271 ! glucosamines [Term] id: CHEBI:21656 name: N-acyl-hexosamine -subset: 3_STAR -synonym: "N-acyl-hexosamine" EXACT [ChEBI] -synonym: "N-acyl-hexosamines" RELATED [ChEBI] +subset: 3:STAR +synonym: "N-acyl-hexosamine" RELATED [chebi] +synonym: "N-acyl-hexosamines" RELATED [chebi] is_a: CHEBI:24586 ! hexosamine [Term] id: CHEBI:21731 name: N-glycosyl compound def: "A glycosyl compound arising formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to a nitrogen atom, thus creating a C-N bond." [] -subset: 3_STAR -synonym: "glycosylamine" EXACT IUPAC_NAME [IUPAC] -synonym: "glycosylamines" RELATED [IUPAC] -synonym: "N-glycoside" RELATED [ChEBI] -synonym: "N-glycosides" RELATED [ChEBI] -synonym: "N-glycosyl compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "glycosylamine" EXACT IUPAC:NAME [IUPAC] +synonym: "glycosylamine" RELATED IUPAC:NAME [iupac] +synonym: "glycosylamines" RELATED [iupac] +synonym: "N-glycoside" RELATED [chebi] +synonym: "N-glycosides" RELATED [chebi] +synonym: "N-glycosyl compounds" RELATED [chebi] is_a: CHEBI:35352 ! organonitrogen compound is_a: CHEBI:63161 ! glycosyl compound [Term] id: CHEBI:21968 name: O-phosphoamino acid -subset: 3_STAR -synonym: "O-phosphoamino acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "O-phosphoamino acids" RELATED [chebi] is_a: CHEBI:25703 ! organic phosphate is_a: CHEBI:26051 ! phosphoamino acid is_a: CHEBI:37734 ! phosphoric ester @@ -3739,52 +3886,54 @@ is_a: CHEBI:37734 ! phosphoric ester [Term] id: CHEBI:22160 name: acetamides -def: "Compounds with the general formula RNHC(=O)CH3." [] -subset: 3_STAR +def: "Compounds with the general formula RNHC(=O)CH3." [] +subset: 3:STAR is_a: CHEBI:37622 ! carboxamide [Term] id: CHEBI:22221 name: acyl group -def: "An organic group formed by removing one or more hydroxy groups from an oxoacid that has the general structure RkE(=O)l(OH)m (l =/= 0). Although the term is almost always applied to organic compounds, with carboxylic acid as the oxoacid, acyl groups can in principle be derived from other types of acids such as sulfonic acids or phosphonic acids." [] -subset: 3_STAR -synonym: "acyl group" EXACT [IUPAC] -synonym: "acyl groups" RELATED [ChEBI] -synonym: "alkanoyl" EXACT IUPAC_NAME [IUPAC] -synonym: "alkanoyl group" RELATED [ChEBI] -synonym: "groupe acyle" RELATED [IUPAC] +def: "An organic group formed by removing one or more hydroxy groups from an oxoacid that has the general structure RkE(=O)l(OH)m (l ≠ 0). Although the term is almost always applied to organic compounds, with carboxylic acid as the oxoacid, acyl groups can in principle be derived from other types of acids such as sulfonic acids or phosphonic acids." [] +subset: 3:STAR +synonym: "acyl group" RELATED [iupac] +synonym: "acyl groups" RELATED [chebi] +synonym: "alkanoyl" EXACT IUPAC:NAME [IUPAC] +synonym: "alkanoyl" RELATED IUPAC:NAME [iupac] +synonym: "alkanoyl group" RELATED [chebi] +synonym: "groupe acyle" RELATED [iupac] is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:22256 name: adenosine phosphate -subset: 3_STAR -synonym: "adenosine phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "adenosine phosphates" RELATED [chebi] is_a: CHEBI:61296 ! adenyl ribonucleotide -relationship: has_functional_parent CHEBI:16335 ! adenosine +relationship: RO:0018038 CHEBI:16335 ! has functional parent adenosine [Term] id: CHEBI:22260 name: adenosines def: "Any purine ribonucleoside that is a derivative of adenosine." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:26399 ! purine ribonucleoside -relationship: has_functional_parent CHEBI:16708 ! adenine +relationship: RO:0018038 CHEBI:16708 ! has functional parent adenine [Term] id: CHEBI:22313 name: alkaline earth metal atom -subset: 3_STAR -synonym: "alkaline earth metal" RELATED [ChEBI] -synonym: "alkaline earth metals" EXACT IUPAC_NAME [IUPAC] -synonym: "alkaline-earth metal" RELATED [ChEBI] -synonym: "alkaline-earth metals" RELATED [ChEBI] -synonym: "Erdalkalimetall" RELATED [ChEBI] -synonym: "Erdalkalimetalle" RELATED [ChEBI] -synonym: "metal alcalino-terreux" RELATED [ChEBI] -synonym: "metal alcalinoterreo" RELATED [ChEBI] -synonym: "metales alcalinoterreos" RELATED [ChEBI] -synonym: "metaux alcalino-terreux" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkaline earth metal" RELATED [chebi] +synonym: "alkaline earth metals" EXACT IUPAC:NAME [IUPAC] +synonym: "alkaline earth metals" RELATED IUPAC:NAME [iupac] +synonym: "alkaline-earth metal" RELATED [chebi] +synonym: "alkaline-earth metals" RELATED [chebi] +synonym: "Erdalkalimetall" RELATED [chebi] +synonym: "Erdalkalimetalle" RELATED [chebi] +synonym: "metal alcalino-terreux" RELATED [chebi] +synonym: "metal alcalinoterreo" RELATED [chebi] +synonym: "metales alcalinoterreos" RELATED [chebi] +synonym: "metaux alcalino-terreux" RELATED [chebi] is_a: CHEBI:33318 ! main group element atom is_a: CHEBI:33521 ! metal atom is_a: CHEBI:33559 ! s-block element atom @@ -3792,15 +3941,16 @@ is_a: CHEBI:33559 ! s-block element atom [Term] id: CHEBI:22314 name: alkali metal atom -subset: 3_STAR -synonym: "alkali metal" RELATED [ChEBI] -synonym: "alkali metals" EXACT IUPAC_NAME [IUPAC] -synonym: "Alkalimetall" RELATED [ChEBI] -synonym: "Alkalimetalle" RELATED [ChEBI] -synonym: "metal alcalin" RELATED [ChEBI] -synonym: "metal alcalino" RELATED [ChEBI] -synonym: "metales alcalinos" RELATED [ChEBI] -synonym: "metaux alcalins" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkali metal" RELATED [chebi] +synonym: "alkali metals" EXACT IUPAC:NAME [IUPAC] +synonym: "alkali metals" RELATED IUPAC:NAME [iupac] +synonym: "Alkalimetall" RELATED [chebi] +synonym: "Alkalimetalle" RELATED [chebi] +synonym: "metal alcalin" RELATED [chebi] +synonym: "metal alcalino" RELATED [chebi] +synonym: "metales alcalinos" RELATED [chebi] +synonym: "metaux alcalins" RELATED [chebi] is_a: CHEBI:33318 ! main group element atom is_a: CHEBI:33521 ! metal atom is_a: CHEBI:33559 ! s-block element atom @@ -3809,13 +3959,14 @@ is_a: CHEBI:33559 ! s-block element atom id: CHEBI:22315 name: alkaloid def: "Any of the naturally occurring, basic nitrogen compounds (mostly heterocyclic) occurring mostly in the plant kingdom, but also found in bacteria, fungi, and animals. By extension, certain neutral compounds biogenetically related to basic alkaloids are also classed as alkaloids. Amino acids, peptides, proteins, nucleotides, nucleic acids, amino sugars and antibiotics are not normally regarded as alkaloids. Compounds in which the nitrogen is exocyclic (dopamine, mescaline, serotonin, etc.) are usually classed as amines rather than alkaloids." [] -subset: 3_STAR -synonym: "alcaloide" RELATED [ChEBI] -synonym: "alcaloides" RELATED [ChEBI] -synonym: "Alkaloid" EXACT [ChEBI] -synonym: "Alkaloide" RELATED [ChEBI] -synonym: "alkaloids" EXACT IUPAC_NAME [IUPAC] -xref: Wikipedia:Alkaloid +subset: 3:STAR +synonym: "alcaloide" RELATED [chebi] +synonym: "alcaloides" RELATED [chebi] +synonym: "Alkaloid" RELATED [chebi] +synonym: "Alkaloide" RELATED [chebi] +synonym: "alkaloids" EXACT IUPAC:NAME [IUPAC] +synonym: "alkaloids" RELATED IUPAC:NAME [iupac] +xref: wikipedia.en:Alkaloid {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35352 ! organonitrogen compound relationship: RO:0000087 CHEBI:25212 ! has role metabolite @@ -3824,15 +3975,15 @@ relationship: RO:0000087 CHEBI:25212 ! has role metabolite id: CHEBI:22492 name: amino aldehyde def: "Any aldehyde which contains an amino group." [] -subset: 3_STAR -xref: PMID:17105264 {source="Europe PMC"} +subset: 3:STAR +xref: pubmed:17105264 {source="pubmed"} is_a: CHEBI:17478 ! aldehyde [Term] id: CHEBI:22506 name: aminoglycan -subset: 3_STAR -synonym: "aminoglycans" RELATED [ChEBI] +subset: 3:STAR +synonym: "aminoglycans" RELATED [chebi] is_a: CHEBI:35352 ! organonitrogen compound is_a: CHEBI:65212 ! polysaccharide derivative @@ -3840,59 +3991,61 @@ is_a: CHEBI:65212 ! polysaccharide derivative id: CHEBI:22527 name: aminopurine def: "Any purine having at least one amino substituent." [] -subset: 3_STAR -synonym: "aminopurines" RELATED [ChEBI] +subset: 3:STAR +synonym: "aminopurines" RELATED [chebi] is_a: CHEBI:26401 ! purines [Term] id: CHEBI:22563 name: anion def: "A monoatomic or polyatomic species having one or more elementary charges of the electron." [] -subset: 3_STAR -synonym: "Anion" EXACT [ChEBI] -synonym: "anion" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "Anionen" RELATED [ChEBI] -synonym: "aniones" RELATED [ChEBI] -synonym: "anions" RELATED [IUPAC] +subset: 3:STAR +synonym: "Anion" RELATED [chebi] +synonym: "anion" EXACT IUPAC:NAME [IUPAC] +synonym: "anion" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Anionen" RELATED [chebi] +synonym: "aniones" RELATED [chebi] +synonym: "anions" RELATED [iupac] is_a: CHEBI:24870 ! ion [Term] id: CHEBI:22586 name: antioxidant def: "A substance that opposes oxidation or inhibits reactions brought about by dioxygen or peroxides." [] -subset: 3_STAR -synonym: "antioxidants" RELATED [ChEBI] -synonym: "antioxydant" RELATED [ChEBI] -synonym: "antoxidant" RELATED [ChEBI] +subset: 3:STAR +synonym: "antioxidants" RELATED [chebi] +synonym: "antioxydant" RELATED [chebi] +synonym: "antoxidant" RELATED [chebi] is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:22695 name: base -def: "A molecular entity having an available pair of electrons capable of forming a covalent bond with a hydron (Bronsted base) or with the vacant orbital of some other molecular entity (Lewis base)." [] -subset: 3_STAR -synonym: "Base" EXACT [ChEBI] -synonym: "base" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "Base1" RELATED [KEGG_COMPOUND] -synonym: "Base2" RELATED [KEGG_COMPOUND] -synonym: "Basen" RELATED [ChEBI] -synonym: "bases" RELATED [ChEBI] -synonym: "Nucleobase" RELATED [KEGG_COMPOUND] -xref: KEGG:C00701 +def: "A molecular entity having an available pair of electrons capable of forming a covalent bond with a hydron (Brønsted base) or with the vacant orbital of some other molecular entity (Lewis base)." [] +subset: 3:STAR +synonym: "Base" RELATED [chebi] +synonym: "base" EXACT IUPAC:NAME [IUPAC] +synonym: "base" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Base1" RELATED [kegg.compound] +synonym: "Base2" RELATED [kegg.compound] +synonym: "Basen" RELATED [chebi] +synonym: "bases" RELATED [chebi] +synonym: "Nucleobase" RELATED [kegg.compound] +xref: kegg.compound:C00701 {source="kegg.compound"} is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:22712 name: benzenes def: "Any benzenoid aromatic compound consisting of the benzene skeleton and its substituted derivatives." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:33836 ! benzenoid aromatic compound [Term] id: CHEBI:22728 name: benzopyrrole -subset: 3_STAR -synonym: "benzopyrroles" RELATED [ChEBI] +subset: 3:STAR +synonym: "benzopyrroles" RELATED [chebi] is_a: CHEBI:27171 ! organic heterobicyclic compound is_a: CHEBI:38101 ! organonitrogen heterocyclic compound is_a: CHEBI:38180 ! polycyclic heteroarene @@ -3900,28 +4053,29 @@ is_a: CHEBI:38180 ! polycyclic heteroarene [Term] id: CHEBI:22744 name: benzyl group -subset: 3_STAR -synonym: "benzyl" EXACT IUPAC_NAME [IUPAC] -synonym: "Bn" RELATED [ChEBI] -synonym: "C6H5-CH2-" RELATED [IUPAC] -synonym: "phenylalanine side-chain" RELATED [ChEBI] -synonym: "phenylmethyl" RELATED [IUPAC] +subset: 3:STAR +synonym: "benzyl" EXACT IUPAC:NAME [IUPAC] +synonym: "benzyl" RELATED IUPAC:NAME [iupac] +synonym: "Bn" RELATED [chebi] +synonym: "C6H5-CH2-" RELATED [iupac] +synonym: "phenylalanine side-chain" RELATED [chebi] +synonym: "phenylmethyl" RELATED [iupac] is_a: CHEBI:33452 ! benzylic group is_a: CHEBI:50325 ! proteinogenic amino-acid side-chain group -relationship: is_substituent_group_from CHEBI:17578 ! toluene +relationship: RO:0018037 CHEBI:17578 ! is substitutent group from toluene [Term] id: CHEBI:228364 name: NMR chemical shift reference compound -def: "Any compound that produces a peak used as reference frequency in the delta chemical shift scale." [] -subset: 3_STAR -synonym: "NMR chemical shift reference compounds" RELATED [ChEBI] -synonym: "NMR chemical shift standard" RELATED [ChEBI] -synonym: "NMR chemical shift standards" RELATED [ChEBI] -synonym: "NMR internal standard" RELATED [ChEBI] -synonym: "NMR internal standards" RELATED [ChEBI] -synonym: "NMR reference standard" RELATED [ChEBI] -synonym: "NMR reference standards" RELATED [ChEBI] +def: "Any compound that produces a peak used as reference frequency in the δ chemical shift scale." [] +subset: 3:STAR +synonym: "NMR chemical shift reference compounds" RELATED [chebi] +synonym: "NMR chemical shift standard" RELATED [chebi] +synonym: "NMR chemical shift standards" RELATED [chebi] +synonym: "NMR internal standard" RELATED [chebi] +synonym: "NMR internal standards" RELATED [chebi] +synonym: "NMR reference standard" RELATED [chebi] +synonym: "NMR reference standards" RELATED [chebi] is_a: CHEBI:33232 ! application is_a: CHEBI:51086 ! chemical role @@ -3929,28 +4083,28 @@ is_a: CHEBI:51086 ! chemical role id: CHEBI:22868 name: bile salt def: "A sodium salt of the conjugate of any bile acid with either glycine or taurine." [] -subset: 3_STAR -synonym: "Bile acid" RELATED [KEGG_COMPOUND] -synonym: "bile salts" RELATED [ChEBI] -xref: KEGG:C01558 +subset: 3:STAR +synonym: "Bile acid" RELATED [kegg.compound] +synonym: "bile salts" RELATED [chebi] +xref: kegg.compound:C01558 {source="kegg.compound"} is_a: CHEBI:36078 ! cholanoid is_a: CHEBI:38700 ! organic sodium salt [Term] id: CHEBI:22984 name: calcium atom -subset: 3_STAR -synonym: "20Ca" RELATED [IUPAC] -synonym: "Ca" RELATED [IUPAC, UniProt] -synonym: "calcio" RELATED [ChEBI] -synonym: "Calcium" RELATED [KEGG_COMPOUND] -synonym: "calcium" EXACT IUPAC_NAME [IUPAC] -synonym: "calcium" RELATED [ChEBI] -synonym: "Kalzium" RELATED [ChEBI] -xref: CAS:7440-70-2 {source="ChemIDplus"} -xref: DrugBank:DB01373 -xref: KEGG:C00076 -xref: WebElements:Ca +subset: 3:STAR +synonym: "20Ca" RELATED [iupac] +synonym: "Ca" RELATED [iupac, uniprot_ft] +synonym: "calcio" RELATED [chebi] +synonym: "Calcium" RELATED [kegg.compound] +synonym: "calcium" EXACT IUPAC:NAME [IUPAC] +synonym: "calcium" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Kalzium" RELATED [chebi] +xref: cas:7440-70-2 {source="cas"} +xref: drugbank:DB01373 {source="drugbank"} +xref: kegg.compound:C00076 {source="kegg.compound"} +xref: webelements:Ca {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:22313 ! alkaline earth metal atom relationship: RO:0000087 CHEBI:33937 ! has role macronutrient @@ -3958,10 +4112,10 @@ relationship: RO:0000087 CHEBI:33937 ! has role macronutrient [Term] id: CHEBI:22985 name: calcium molecular entity -subset: 3_STAR -synonym: "calcium compounds" RELATED [ChEBI] -synonym: "calcium molecular entities" RELATED [ChEBI] -synonym: "calcium molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "calcium compounds" RELATED [chebi] +synonym: "calcium molecular entities" RELATED [chebi] +synonym: "calcium molecular entity" RELATED [chebi] is_a: CHEBI:33299 ! alkaline earth molecular entity relationship: has_part CHEBI:22984 ! calcium atom @@ -3969,82 +4123,85 @@ relationship: has_part CHEBI:22984 ! calcium atom id: CHEBI:23004 name: carbamoyl group def: "The univalent carboacyl group formed by loss of -OH from the carboxy group of carbamic acid." [] -subset: 3_STAR -synonym: "-C(O)NH2" RELATED [ChEBI] -synonym: "-CONH2" RELATED [IUPAC] -synonym: "aminocarbonyl" RELATED [IUPAC] -synonym: "carbamoyl" EXACT IUPAC_NAME [IUPAC] -synonym: "carbamyl" RELATED [ChEBI] -synonym: "carbamyl group" RELATED [ChEBI] -synonym: "carboxamide" RELATED [IUPAC] -xref: PMID:24168430 {source="Europe PMC"} +subset: 3:STAR +synonym: "-C(O)NH2" RELATED [chebi] +synonym: "-CONH2" RELATED [iupac] +synonym: "aminocarbonyl" RELATED [iupac] +synonym: "carbamoyl" EXACT IUPAC:NAME [IUPAC] +synonym: "carbamoyl" RELATED IUPAC:NAME [iupac] +synonym: "carbamyl" RELATED [chebi] +synonym: "carbamyl group" RELATED [chebi] +synonym: "carboxamide" RELATED [iupac] +xref: pubmed:24168430 {source="pubmed"} is_a: CHEBI:27207 ! univalent carboacyl group -relationship: is_substituent_group_from CHEBI:28616 ! carbamic acid +relationship: RO:0018037 CHEBI:28616 ! is substitutent group from carbamic acid [Term] id: CHEBI:23014 name: carbon oxide -subset: 3_STAR -synonym: "carbon oxides" RELATED [ChEBI] -synonym: "oxides of carbon" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbon oxides" RELATED [chebi] +synonym: "oxides of carbon" RELATED [chebi] is_a: CHEBI:25701 ! organic oxide is_a: CHEBI:36963 ! organooxygen compound [Term] id: CHEBI:23016 name: carbonates -def: "Organooxygen compounds that are salts or esters of carbonic acid, H2CO3." [] -subset: 3_STAR +def: "Organooxygen compounds that are salts or esters of carbonic acid, H2CO3." [] +subset: 3:STAR is_a: CHEBI:36963 ! organooxygen compound -relationship: has_functional_parent CHEBI:28976 ! carbonic acid +relationship: RO:0018038 CHEBI:28976 ! has functional parent carbonic acid [Term] id: CHEBI:23019 name: carbonyl group -subset: 3_STAR -synonym: ">C=O" RELATED [IUPAC] -synonym: "carbonyl" EXACT IUPAC_NAME [IUPAC] -synonym: "carbonyl group" EXACT [ChEBI, UniProt] +subset: 3:STAR +synonym: ">C=O" RELATED [iupac] +synonym: "carbonyl" EXACT IUPAC:NAME [IUPAC] +synonym: "carbonyl" RELATED IUPAC:NAME [iupac] +synonym: "carbonyl group" RELATED [chebi, uniprot_ft] is_a: CHEBI:51422 ! organodiyl group [Term] id: CHEBI:23042 name: carotene def: "Hydrocarbon carotenoids." [] -subset: 3_STAR -synonym: "carotene" EXACT [ChEBI] -synonym: "carotenes" EXACT IUPAC_NAME [IUPAC] -synonym: "carotenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "carotene" RELATED [chebi] +synonym: "carotenes" EXACT IUPAC:NAME [IUPAC] +synonym: "carotenes" RELATED IUPAC:NAME [chebi, iupac] is_a: CHEBI:35193 ! tetraterpene [Term] id: CHEBI:23044 name: carotenoid -def: "One of a class of tetraterpenoids (C40), formally derived from the acyclic parent, psi,psi-carotene by hydrogenation, dehydrogenation, cyclization, oxidation, or combination of these processes. This class includes carotenes, xanthophylls and certain compounds that arise from rearrangement of the skeleton of psi,psi-carotene or by loss of part of this structure. Retinoids are excluded." [] -subset: 3_STAR -synonym: "carotenes and carotenoids" RELATED [ChemIDplus] -synonym: "carotenoid" EXACT IUPAC_NAME [IUPAC] -synonym: "carotenoids" RELATED [ChEBI] -xref: CAS:36-88-4 {source="ChemIDplus"} +def: "One of a class of tetraterpenoids (C40), formally derived from the acyclic parent, ψ,ψ-carotene by hydrogenation, dehydrogenation, cyclization, oxidation, or combination of these processes. This class includes carotenes, xanthophylls and certain compounds that arise from rearrangement of the skeleton of ψ,ψ-carotene or by loss of part of this structure. Retinoids are excluded." [] +subset: 3:STAR +synonym: "carotenes and carotenoids" RELATED [chemidplus] +synonym: "carotenoid" EXACT IUPAC:NAME [IUPAC] +synonym: "carotenoid" RELATED IUPAC:NAME [iupac] +synonym: "carotenoids" RELATED [chebi] +xref: cas:36-88-4 {source="cas"} is_a: CHEBI:26935 ! tetraterpenoid -relationship: has_parent_hydride CHEBI:23042 ! carotene +relationship: RO:0018040 CHEBI:23042 ! has parent hydride carotene [Term] id: CHEBI:23045 name: carotenol -subset: 3_STAR -synonym: "carotenols" RELATED [ChEBI] -synonym: "hydroxycarotenoids" RELATED [ChEBI] +subset: 3:STAR +synonym: "carotenols" RELATED [chebi] +synonym: "hydroxycarotenoids" RELATED [chebi] is_a: CHEBI:27325 ! xanthophyll [Term] id: CHEBI:23079 name: cerebroside def: "Any member of a group of glycosphingolipids, also known as monoglycosylceramides, which are important components in animal muscle and nerve cell membranes." [] -subset: 3_STAR -synonym: "cerebrosides" RELATED [ChEBI] -synonym: "monoglycosylceramide" RELATED [ChEBI] -synonym: "monoglycosylceramides" RELATED [ChEBI] +subset: 3:STAR +synonym: "cerebrosides" RELATED [chebi] +synonym: "monoglycosylceramide" RELATED [chebi] +synonym: "monoglycosylceramides" RELATED [chebi] is_a: CHEBI:17761 ! ceramide is_a: CHEBI:25513 ! neutral glycosphingolipid @@ -4052,83 +4209,100 @@ is_a: CHEBI:25513 ! neutral glycosphingolipid id: CHEBI:23213 name: choline ester alt_id: CHEBI:3666 -subset: 3_STAR -synonym: "choline esters" RELATED [ChEBI] +subset: 3:STAR +synonym: "choline esters" RELATED [chebi] is_a: CHEBI:35701 ! ester -relationship: has_functional_parent CHEBI:15354 ! choline +relationship: RO:0018038 CHEBI:15354 ! has functional parent choline [Term] id: CHEBI:23217 name: cholines def: "A quaternary ammonium ion based on the choline ion and its substituted derivatives thereof." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:35267 ! quaternary ammonium ion [Term] id: CHEBI:23357 name: cofactor def: "An organic molecule or ion (usually a metal ion) that is required by an enzyme for its activity. It may be attached either loosely (coenzyme) or tightly (prosthetic group)." [] -subset: 3_STAR -synonym: "cofactor" EXACT [IUPAC] -synonym: "cofactors" EXACT IUPAC_NAME [IUPAC] -xref: Wikipedia:Cofactor_(biochemistry) +subset: 3:STAR +synonym: "cofactor" RELATED [iupac] +synonym: "cofactors" EXACT IUPAC:NAME [IUPAC] +synonym: "cofactors" RELATED IUPAC:NAME [iupac] +xref: wikipedia.en:Cofactor_(biochemistry) {source="wikipedia.en"} is_a: CHEBI:52206 ! biochemical role [Term] id: CHEBI:23367 name: molecular entity def: "Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity." [] -subset: 3_STAR -synonym: "entidad molecular" RELATED [IUPAC] -synonym: "entidades moleculares" RELATED [IUPAC] -synonym: "entite moleculaire" RELATED [IUPAC] -synonym: "molecular entities" RELATED [IUPAC] -synonym: "molecular entity" EXACT IUPAC_NAME [IUPAC] -synonym: "molekulare Entitaet" RELATED [ChEBI] +subset: 3:STAR +synonym: "entidad molecular" RELATED [iupac] +synonym: "entidades moleculares" RELATED [iupac] +synonym: "entite moleculaire" RELATED [iupac] +synonym: "molecular entities" RELATED [iupac] +synonym: "molecular entity" EXACT IUPAC:NAME [IUPAC] +synonym: "molecular entity" RELATED IUPAC:NAME [iupac] +synonym: "molekulare Entitaet" RELATED [chebi] is_a: CHEBI:24431 ! chemical entity +[Term] +id: CHEBI:234420 +name: (S)-noradrenaline(1+) +def: "An organic cation that is the conjugate acid of (S)-noradrenaline, obtained by protonation of the primary amino group; major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2S)-2-(3,4-dihydroxyphenyl)-2-hydroxyethan-1-aminium" RELATED [iupac] +synonym: "(2S)-2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "(S)-noradrenaline cation" RELATED [chebi] +synonym: "(S)-noradrenalinium cation" RELATED [chebi] +synonym: "(S)-noradrenalinium(1+)" RELATED [chebi] +is_a: CHEBI:166902 ! noradrenaline(1+) +relationship: RO:0018034 CHEBI:33571 ! is protonated form of (S)-noradrenaline +relationship: RO:0018039 CHEBI:72587 ! is enantiomer of (R)-noradrenaline(1+) + [Term] id: CHEBI:23449 name: cyclic peptide -subset: 3_STAR -synonym: "cyclic peptides" RELATED [ChEBI] -synonym: "Cyclopeptid" RELATED [ChEBI] -synonym: "peptide cyclique" RELATED [IUPAC] -synonym: "peptido ciclico" RELATED [IUPAC] -synonym: "Zyklopeptid" RELATED [ChEBI] +subset: 3:STAR +synonym: "cyclic peptides" RELATED [chebi] +synonym: "Cyclopeptid" RELATED [chebi] +synonym: "peptide cyclique" RELATED [iupac] +synonym: "peptido ciclico" RELATED [iupac] +synonym: "Zyklopeptid" RELATED [chebi] is_a: CHEBI:16670 ! peptide [Term] id: CHEBI:23677 name: diazole def: "An azole that is either one of a pair of heterocyclic organic compounds comprising three carbon atoms and two nitrogen atoms arranged in a ring." [] -subset: 3_STAR -synonym: "diazoles" RELATED [ChEBI] +subset: 3:STAR +synonym: "diazoles" RELATED [chebi] is_a: CHEBI:68452 ! azole [Term] id: CHEBI:237958 name: (\{[(2R,3S,4R,5R)-3,4-dihydroxy-5-(9H-purin-9-yl)oxolan-2-yl]methyl phosphonato\}oxy)(phosphonatooxy)phosphinate -subset: 2_STAR +subset: 2:STAR is_a: CHEBI:37045 ! purine ribonucleoside 5'-triphosphate is_a: CHEBI:37096 ! adenosine 5'-phosphate -relationship: is_conjugate_acid_of CHEBI:57299 ! ATP(3-) relationship: RO:0000087 CHEBI:50733 ! has role nutraceutical +relationship: RO:0018034 CHEBI:57299 ! is protonated form of ATP(3-) [Term] id: CHEBI:23888 name: drug def: "Any substance which when absorbed into a living organism may modify one or more of its functions. The term is generally accepted for a substance taken for a therapeutic purpose, but is also commonly used for abused substances." [] -subset: 3_STAR -synonym: "drugs" RELATED [ChEBI] -synonym: "medicine" RELATED [ChEBI] +subset: 3:STAR +synonym: "drugs" RELATED [chebi] +synonym: "medicine" RELATED [chebi] is_a: CHEBI:52217 ! pharmaceutical [Term] id: CHEBI:23906 name: monoatomic cation -subset: 3_STAR -synonym: "monoatomic cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "monoatomic cations" RELATED [chebi] is_a: CHEBI:24867 ! monoatomic ion is_a: CHEBI:36916 ! cation @@ -4136,13 +4310,14 @@ is_a: CHEBI:36916 ! cation id: CHEBI:23924 name: enzyme inhibitor def: "A compound or agent that combines with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction." [] -subset: 3_STAR -synonym: "enzyme inhibitor" EXACT IUPAC_NAME [IUPAC] -synonym: "enzyme inhibitors" RELATED [ChEBI] -synonym: "inhibidor enzimatico" RELATED [ChEBI] -synonym: "inhibidores enzimaticos" RELATED [ChEBI] -synonym: "inhibiteur enzymatique" RELATED [ChEBI] -synonym: "inhibiteurs enzymatiques" RELATED [ChEBI] +subset: 3:STAR +synonym: "enzyme inhibitor" EXACT IUPAC:NAME [IUPAC] +synonym: "enzyme inhibitor" RELATED IUPAC:NAME [iupac] +synonym: "enzyme inhibitors" RELATED [chebi] +synonym: "inhibidor enzimatico" RELATED [chebi] +synonym: "inhibidores enzimaticos" RELATED [chebi] +synonym: "inhibiteur enzymatique" RELATED [chebi] +synonym: "inhibiteurs enzymatiques" RELATED [chebi] is_a: CHEBI:35222 ! inhibitor is_a: CHEBI:52206 ! biochemical role @@ -4150,54 +4325,54 @@ is_a: CHEBI:52206 ! biochemical role id: CHEBI:24261 name: glucocorticoid def: "Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood." [] -subset: 3_STAR -synonym: "glucocorticoids" RELATED [ChEBI] +subset: 3:STAR +synonym: "glucocorticoids" RELATED [chebi] is_a: CHEBI:36699 ! corticosteroid hormone [Term] id: CHEBI:24271 name: glucosamines def: "Any hexosamine that is glucose in which at least one of the hydroxy groups has been replaced by an amino group." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24586 ! hexosamine [Term] id: CHEBI:24318 name: glutamine family amino acid -def: "An L-alpha-amino acid which is L-glutamic acid or any of the essential amino acids biosynthesised from it (glutamine, proline and arginine). A closed class." [] -subset: 3_STAR -synonym: "glutamine family amino acids" RELATED [ChEBI] -xref: PMID:20716061 {source="Europe PMC"} +def: "An L-α-amino acid which is L-glutamic acid or any of the essential amino acids biosynthesised from it (glutamine, proline and arginine). A closed class." [] +subset: 3:STAR +synonym: "glutamine family amino acids" RELATED [chebi] +xref: pubmed:20716061 {source="pubmed"} is_a: CHEBI:15705 ! L-alpha-amino acid is_a: CHEBI:83813 ! proteinogenic amino acid [Term] id: CHEBI:24319 name: EC 6.3.1.2 (glutamate--ammonia ligase) inhibitor -def: "An EC 6.3.* (C-N bond-forming ligase) inhibitor that interferes with the action of glutamate--ammonia ligase (EC 6.3.1.2)." [] -subset: 3_STAR -synonym: "EC 6.3.1.2 (glutamate--ammonia ligase) inhibitors" RELATED [ChEBI] -synonym: "EC 6.3.1.2 inhibitor" RELATED [ChEBI] -synonym: "EC 6.3.1.2 inhibitors" RELATED [ChEBI] -synonym: "glutamate--ammonia ligase (EC 6.3.1.2) inhibitor" RELATED [ChEBI] -synonym: "glutamate--ammonia ligase (EC 6.3.1.2) inhibitors" RELATED [ChEBI] -synonym: "glutamate--ammonia ligase inhibitor" RELATED [ChEBI] -synonym: "glutamate--ammonia ligase inhibitors" RELATED [ChEBI] -synonym: "glutamine synthetase inhibitor" RELATED [ChEBI] -synonym: "glutamine synthetase inhibitors" RELATED [ChEBI] -synonym: "glutamylhydroxamic synthetase inhibitor" RELATED [ChEBI] -synonym: "glutamylhydroxamic synthetase inhibitors" RELATED [ChEBI] -synonym: "L-glutamate:ammonia ligase (ADP-forming) inhibitor" RELATED [ChEBI] -synonym: "L-glutamate:ammonia ligase (ADP-forming) inhibitors" RELATED [ChEBI] -synonym: "L-glutamine synthetase inhibitor" RELATED [ChEBI] -synonym: "L-glutamine synthetase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Glutamine_synthetase +def: "An EC 6.3.* (C‒N bond-forming ligase) inhibitor that interferes with the action of glutamate—ammonia ligase (EC 6.3.1.2)." [] +subset: 3:STAR +synonym: "EC 6.3.1.2 (glutamate--ammonia ligase) inhibitors" RELATED [chebi] +synonym: "EC 6.3.1.2 inhibitor" RELATED [chebi] +synonym: "EC 6.3.1.2 inhibitors" RELATED [chebi] +synonym: "glutamate--ammonia ligase (EC 6.3.1.2) inhibitor" RELATED [chebi] +synonym: "glutamate--ammonia ligase (EC 6.3.1.2) inhibitors" RELATED [chebi] +synonym: "glutamate--ammonia ligase inhibitor" RELATED [chebi] +synonym: "glutamate--ammonia ligase inhibitors" RELATED [chebi] +synonym: "glutamine synthetase inhibitor" RELATED [chebi] +synonym: "glutamine synthetase inhibitors" RELATED [chebi] +synonym: "glutamylhydroxamic synthetase inhibitor" RELATED [chebi] +synonym: "glutamylhydroxamic synthetase inhibitors" RELATED [chebi] +synonym: "L-glutamate:ammonia ligase (ADP-forming) inhibitor" RELATED [chebi] +synonym: "L-glutamate:ammonia ligase (ADP-forming) inhibitors" RELATED [chebi] +synonym: "L-glutamine synthetase inhibitor" RELATED [chebi] +synonym: "L-glutamine synthetase inhibitors" RELATED [chebi] +xref: wikipedia.en:Glutamine_synthetase {source="wikipedia.en"} is_a: CHEBI:76823 ! EC 6.3.1.* (acid-ammonia/amine ligase) inhibitor [Term] id: CHEBI:24384 name: glycogens -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:37163 ! glucan [Term] @@ -4205,15 +4380,15 @@ id: CHEBI:24402 name: glycosphingolipid alt_id: CHEBI:5498 def: "A glycosphingolipid is a glycolipid that is a carbohydrate-containing derivative of a sphingoid or ceramide. It is understood that the carbohydrate residue is attached by a glycosidic linkage to O-1 of the sphingoid." [] -subset: 3_STAR -synonym: "glycosphingolipids" RELATED [ChEBI] -xref: PMID:18845618 {source="Europe PMC"} -xref: PMID:19303901 {source="Europe PMC"} -xref: PMID:26954668 {source="Europe PMC"} -xref: PMID:26976737 {source="Europe PMC"} -xref: PMID:27253729 {source="Europe PMC"} -xref: PMID:27325407 {source="Europe PMC"} -xref: Wikipedia:Glycosphingolipid +subset: 3:STAR +synonym: "glycosphingolipids" RELATED [chebi] +xref: pubmed:18845618 {source="pubmed"} +xref: pubmed:19303901 {source="pubmed"} +xref: pubmed:26954668 {source="pubmed"} +xref: pubmed:26976737 {source="pubmed"} +xref: pubmed:27253729 {source="pubmed"} +xref: pubmed:27325407 {source="pubmed"} +xref: wikipedia.en:Glycosphingolipid {source="wikipedia.en"} is_a: CHEBI:26739 ! sphingolipid is_a: CHEBI:33563 ! glycolipid @@ -4221,28 +4396,29 @@ is_a: CHEBI:33563 ! glycolipid id: CHEBI:24431 name: chemical entity def: "A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances." [] -subset: 3_STAR -synonym: "chemical entity" EXACT [UniProt] +subset: 3:STAR +synonym: "chemical entity" RELATED [uniprot_ft] [Term] id: CHEBI:24432 name: biological role def: "A role played by the molecular entity or part thereof within a biological context." [] -subset: 3_STAR -synonym: "biological function" RELATED [ChEBI] +subset: 3:STAR +synonym: "biological function" RELATED [chebi] is_a: CHEBI:50906 ! role [Term] id: CHEBI:24433 name: group def: "A defined linked collection of atoms or a single atom within a molecular entity." [] -subset: 3_STAR -synonym: "group" EXACT IUPAC_NAME [IUPAC] -synonym: "groupe" RELATED [IUPAC] -synonym: "grupo" RELATED [IUPAC] -synonym: "grupos" RELATED [IUPAC] -synonym: "Gruppe" RELATED [ChEBI] -synonym: "Rest" RELATED [ChEBI] +subset: 3:STAR +synonym: "group" EXACT IUPAC:NAME [IUPAC] +synonym: "group" RELATED IUPAC:NAME [iupac] +synonym: "groupe" RELATED [iupac] +synonym: "grupo" RELATED [iupac] +synonym: "grupos" RELATED [iupac] +synonym: "Gruppe" RELATED [chebi] +synonym: "Rest" RELATED [chebi] is_a: CHEBI:24431 ! chemical entity relationship: has_part CHEBI:33250 ! atom @@ -4250,9 +4426,9 @@ relationship: has_part CHEBI:33250 ! atom id: CHEBI:24532 name: organic heterocyclic compound def: "A cyclic compound having as ring members atoms of carbon and at least of one other element." [] -subset: 3_STAR -synonym: "organic heterocycle" RELATED [ChEBI] -synonym: "organic heterocyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic heterocycle" RELATED [chebi] +synonym: "organic heterocyclic compounds" RELATED [chebi] is_a: CHEBI:33285 ! heteroorganic entity is_a: CHEBI:33832 ! organic cyclic compound is_a: CHEBI:5686 ! heterocyclic compound @@ -4261,29 +4437,30 @@ is_a: CHEBI:5686 ! heterocyclic compound id: CHEBI:24533 name: heterodetic cyclic peptide def: "A heterodetic cyclic peptide is a peptide consisting only of amino-acid residues, but in which the linkages forming the ring are not solely peptide bonds; one or more is an isopeptide, disulfide, ester, or other bond." [] -subset: 3_STAR -synonym: "heterodetic cyclic peptide" EXACT IUPAC_NAME [IUPAC] -synonym: "heterodetic cyclic peptides" RELATED [ChEBI] -synonym: "peptide cyclique heterodetique" RELATED [IUPAC] -synonym: "peptido ciclico heterodetico" RELATED [IUPAC] +subset: 3:STAR +synonym: "heterodetic cyclic peptide" EXACT IUPAC:NAME [IUPAC] +synonym: "heterodetic cyclic peptide" RELATED IUPAC:NAME [iupac] +synonym: "heterodetic cyclic peptides" RELATED [chebi] +synonym: "peptide cyclique heterodetique" RELATED [iupac] +synonym: "peptido ciclico heterodetico" RELATED [iupac] is_a: CHEBI:23449 ! cyclic peptide [Term] id: CHEBI:24586 name: hexosamine def: "Any 6-carbon amino monosaccharide with at least one alcoholic hydroxy group replaced by an amino group." [] -subset: 3_STAR -synonym: "hexosamine" EXACT [ChEBI] -synonym: "hexosamines" RELATED [ChEBI] +subset: 3:STAR +synonym: "hexosamine" RELATED [chebi] +synonym: "hexosamines" RELATED [chebi] is_a: CHEBI:60926 ! amino monosaccharide [Term] id: CHEBI:24621 name: hormone def: "Originally referring to an endogenous compound that is formed in specialized organ or group of cells and carried to another organ or group of cells, in the same organism, upon which it has a specific regulatory function, the term is now commonly used to include non-endogenous, semi-synthetic and fully synthetic analogues of such compounds." [] -subset: 3_STAR -synonym: "endocrine" RELATED [ChEBI] -synonym: "hormones" RELATED [ChEBI] +subset: 3:STAR +synonym: "endocrine" RELATED [chebi] +synonym: "hormones" RELATED [chebi] is_a: CHEBI:33280 ! molecular messenger is_a: CHEBI:48705 ! agonist @@ -4291,21 +4468,41 @@ is_a: CHEBI:48705 ! agonist id: CHEBI:24632 name: hydrocarbon def: "A compound consisting of carbon and hydrogen only." [] -subset: 3_STAR -synonym: "hidrocarburo" RELATED [IUPAC] -synonym: "hidrocarburos" RELATED [IUPAC] -synonym: "hydrocarbon" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrocarbons" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrocarbure" RELATED [IUPAC] -synonym: "Kohlenwasserstoff" RELATED [ChEBI] -synonym: "Kohlenwasserstoffe" RELATED [ChEBI] +subset: 3:STAR +synonym: "hidrocarburo" RELATED [iupac] +synonym: "hidrocarburos" RELATED [iupac] +synonym: "hydrocarbon" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrocarbon" RELATED IUPAC:NAME [iupac] +synonym: "hydrocarbons" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrocarbons" RELATED IUPAC:NAME [iupac] +synonym: "hydrocarbure" RELATED [iupac] +synonym: "Kohlenwasserstoff" RELATED [chebi] +synonym: "Kohlenwasserstoffe" RELATED [chebi] is_a: CHEBI:33245 ! organic fundamental parent +[Term] +id: CHEBI:24636 +name: proton +def: "Nuclear particle of charge number +1, spin 1/2 and rest mass of 1.007276470(12) u." [] +subset: 3:STAR +synonym: "(1)1H(+)" RELATED [iupac] +synonym: "(1)H(+)" RELATED [iupac] +synonym: "p" RELATED [iupac] +synonym: "p(+)" RELATED [iupac] +synonym: "protium(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "protium(1+)" RELATED IUPAC:NAME [iupac] +synonym: "proton" EXACT IUPAC:NAME [IUPAC] +synonym: "proton" RELATED IUPAC:NAME [chebi, iupac] +xref: cas:12408-02-5 {source="cas"} +xref: kegg.compound:C00080 {source="kegg.compound"} +is_a: CHEBI:15378 ! hydron +is_a: CHEBI:33253 ! nucleon + [Term] id: CHEBI:24651 name: hydroxides -def: "Hydroxides are chemical compounds containing a hydroxy group or salts containing hydroxide (OH(-))." [] -subset: 3_STAR +def: "Hydroxides are chemical compounds containing a hydroxy group or salts containing hydroxide (OH−)." [] +subset: 3:STAR is_a: CHEBI:25806 ! oxygen molecular entity is_a: CHEBI:33608 ! hydrogen molecular entity is_a: CHEBI:37577 ! heteroatomic molecular entity @@ -4314,39 +4511,41 @@ relationship: has_part CHEBI:43176 ! hydroxy group [Term] id: CHEBI:24663 name: hydroxy-5beta-cholanic acid -def: "Any member of the class of 5beta-cholanic acids carrying at least one hydroxy group at unspecified position." [] -subset: 3_STAR -synonym: "hydroxy-5beta-cholanic acids" RELATED [ChEBI] +def: "Any member of the class of 5β-cholanic acids carrying at least one hydroxy group at unspecified position." [] +subset: 3:STAR +synonym: "hydroxy-5beta-cholanic acids" RELATED [chebi] is_a: CHEBI:33822 ! organic hydroxy compound is_a: CHEBI:36248 ! 5beta-cholanic acids -relationship: has_functional_parent CHEBI:36238 ! 5beta-cholanic acid +relationship: RO:0018038 CHEBI:36238 ! has functional parent 5beta-cholanic acid [Term] id: CHEBI:24780 name: imidazoles def: "A five-membered organic heterocycle containing two nitrogen atoms at positions 1 and 3, or any of its derivatives; compounds containing an imidazole skeleton." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:23677 ! diazole [Term] id: CHEBI:24828 name: indoles def: "Any compound containing an indole skeleton." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:22728 ! benzopyrrole [Term] id: CHEBI:24833 name: oxoacid def: "A compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons)." [] -subset: 3_STAR -synonym: "oxacids" RELATED [ChEBI] -synonym: "oxiacids" RELATED [ChEBI] -synonym: "oxo acid" RELATED [ChEBI] -synonym: "oxoacid" EXACT IUPAC_NAME [IUPAC] -synonym: "oxoacids" EXACT IUPAC_NAME [IUPAC] -synonym: "oxy-acids" RELATED [ChEBI] -synonym: "oxyacids" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxacids" RELATED [chebi] +synonym: "oxiacids" RELATED [chebi] +synonym: "oxo acid" RELATED [chebi] +synonym: "oxoacid" EXACT IUPAC:NAME [IUPAC] +synonym: "oxoacid" RELATED IUPAC:NAME [iupac] +synonym: "oxoacids" EXACT IUPAC:NAME [IUPAC] +synonym: "oxoacids" RELATED IUPAC:NAME [iupac] +synonym: "oxy-acids" RELATED [chebi] +synonym: "oxyacids" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:24651 ! hydroxides relationship: RO:0000087 CHEBI:39141 ! has role Bronsted acid @@ -4354,8 +4553,8 @@ relationship: RO:0000087 CHEBI:39141 ! has role Bronsted acid [Term] id: CHEBI:24834 name: inorganic anion -subset: 3_STAR -synonym: "inorganic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic anions" RELATED [chebi] is_a: CHEBI:22563 ! anion is_a: CHEBI:36914 ! inorganic ion @@ -4363,28 +4562,28 @@ is_a: CHEBI:36914 ! inorganic ion id: CHEBI:24835 name: inorganic molecular entity def: "A molecular entity that contains no carbon." [] -subset: 3_STAR -synonym: "anorganische Verbindungen" RELATED [ChEBI] -synonym: "inorganic compounds" RELATED [ChEBI] -synonym: "inorganic entity" RELATED [ChEBI] -synonym: "inorganic molecular entities" RELATED [ChEBI] -synonym: "inorganics" RELATED [ChEBI] +subset: 3:STAR +synonym: "anorganische Verbindungen" RELATED [chebi] +synonym: "inorganic compounds" RELATED [chebi] +synonym: "inorganic entity" RELATED [chebi] +synonym: "inorganic molecular entities" RELATED [chebi] +synonym: "inorganics" RELATED [chebi] is_a: CHEBI:23367 ! molecular entity [Term] id: CHEBI:24836 name: inorganic oxide -subset: 3_STAR -synonym: "inorganic oxides" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic oxides" RELATED [chebi] is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:25741 ! oxide [Term] id: CHEBI:24839 name: inorganic salt -subset: 3_STAR -synonym: "anorganisches Salz" RELATED [ChEBI] -synonym: "inorganic salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "anorganisches Salz" RELATED [chebi] +synonym: "inorganic salts" RELATED [chebi] is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:24866 ! salt @@ -4392,17 +4591,18 @@ is_a: CHEBI:24866 ! salt id: CHEBI:24866 name: salt def: "A salt is an assembly of cations and anions." [] -subset: 3_STAR -synonym: "ionic compound" RELATED [ChEBI] -synonym: "ionic compounds" RELATED [ChEBI] -synonym: "sal" RELATED [ChEBI] -synonym: "sales" RELATED [ChEBI] -synonym: "salt" EXACT IUPAC_NAME [IUPAC] -synonym: "salts" RELATED [ChEBI] -synonym: "Salz" RELATED [ChEBI] -synonym: "Salze" RELATED [ChEBI] -synonym: "sel" RELATED [ChEBI] -synonym: "sels" RELATED [ChEBI] +subset: 3:STAR +synonym: "ionic compound" RELATED [chebi] +synonym: "ionic compounds" RELATED [chebi] +synonym: "sal" RELATED [chebi] +synonym: "sales" RELATED [chebi] +synonym: "salt" EXACT IUPAC:NAME [IUPAC] +synonym: "salt" RELATED IUPAC:NAME [iupac] +synonym: "salts" RELATED [chebi] +synonym: "Salz" RELATED [chebi] +synonym: "Salze" RELATED [chebi] +synonym: "sel" RELATED [chebi] +synonym: "sels" RELATED [chebi] is_a: CHEBI:37577 ! heteroatomic molecular entity relationship: has_part CHEBI:22563 ! anion relationship: has_part CHEBI:36916 ! cation @@ -4410,48 +4610,50 @@ relationship: has_part CHEBI:36916 ! cation [Term] id: CHEBI:24867 name: monoatomic ion -subset: 3_STAR -synonym: "monoatomic ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "monoatomic ions" RELATED [chebi] is_a: CHEBI:24870 ! ion is_a: CHEBI:33238 ! monoatomic entity [Term] id: CHEBI:24868 name: organic salt -subset: 3_STAR -synonym: "organic salts" RELATED [ChEBI] -synonym: "organisches Salz" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic salts" RELATED [chebi] +synonym: "organisches Salz" RELATED [chebi] is_a: CHEBI:24866 ! salt [Term] id: CHEBI:24870 name: ion def: "A molecular entity having a net electric charge." [] -subset: 3_STAR -synonym: "Ion" EXACT [ChEBI] -synonym: "ion" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "Ionen" RELATED [ChEBI] -synonym: "iones" RELATED [ChEBI] -synonym: "ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "Ion" RELATED [chebi] +synonym: "ion" EXACT IUPAC:NAME [IUPAC] +synonym: "ion" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Ionen" RELATED [chebi] +synonym: "iones" RELATED [chebi] +synonym: "ions" RELATED [chebi] is_a: CHEBI:23367 ! molecular entity [Term] id: CHEBI:24873 name: iron molecular entity -subset: 3_STAR -synonym: "iron compounds" RELATED [ChEBI] -synonym: "iron molecular entities" RELATED [ChEBI] -synonym: "iron molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "iron compounds" RELATED [chebi] +synonym: "iron molecular entities" RELATED [chebi] +synonym: "iron molecular entity" RELATED [chebi] is_a: CHEBI:33744 ! iron group molecular entity relationship: has_part CHEBI:18248 ! iron atom [Term] id: CHEBI:24875 name: iron cation -subset: 3_STAR -synonym: "Fe cation" RELATED [UniProt] -synonym: "iron cation" EXACT IUPAC_NAME [IUPAC] -synonym: "iron cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "Fe cation" RELATED [uniprot_ft] +synonym: "iron cation" EXACT IUPAC:NAME [IUPAC] +synonym: "iron cation" RELATED IUPAC:NAME [iupac] +synonym: "iron cations" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33515 ! transition element cation is_a: CHEBI:82663 ! elemental iron @@ -4461,21 +4663,21 @@ relationship: RO:0000087 CHEBI:23357 ! has role cofactor id: CHEBI:24913 name: isoprenoid def: "Any lipid formally derived from isoprene (2-methylbuta-1,3-diene), the skeleton of which can generally be discerned in repeated occurrence in the molecule. The skeleton of isoprenoids may differ from strict additivity of isoprene units by loss or shift of a fragment, commonly a methyl group. The class includes both hydrocarbons and oxygenated derivatives." [] -subset: 3_STAR -synonym: "isoprenoid" EXACT [ChEBI] -synonym: "isoprenoids" EXACT IUPAC_NAME [IUPAC] -synonym: "isoprenoids" RELATED [ChEBI] -xref: LIPID_MAPS_class:LMPR01 {source="LIPID MAPS"} -xref: PMID:12769708 {source="Europe PMC"} -xref: PMID:19219049 {source="Europe PMC"} +subset: 3:STAR +synonym: "isoprenoid" RELATED [chebi] +synonym: "isoprenoids" EXACT IUPAC:NAME [IUPAC] +synonym: "isoprenoids" RELATED IUPAC:NAME [chebi, iupac] +xref: lipidmaps_class:LMPR01 {source="lipidmaps_class"} +xref: pubmed:12769708 {source="pubmed"} +xref: pubmed:19219049 {source="pubmed"} is_a: CHEBI:18059 ! lipid [Term] id: CHEBI:24943 name: juvenile hormone def: "A family of farnesane sesquiterpenoids that regulate many aspects of insect physiology." [] -subset: 3_STAR -xref: Wikipedia:Juvenile_hormone +subset: 3:STAR +xref: wikipedia.en:Juvenile_hormone {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:36757 ! farnesane sesquiterpenoid relationship: RO:0000087 CHEBI:24621 ! has role hormone @@ -4484,7 +4686,8 @@ relationship: RO:0000087 CHEBI:75767 ! has role animal metabolite [Term] id: CHEBI:25046 name: linear tetrapyrrole -subset: 1_STAR +subset: 1:STAR +synonym: "linear tetrapyrroles" RELATED [chebi] is_a: CHEBI:26932 ! tetrapyrrole [Term] @@ -4493,19 +4696,20 @@ name: metabolite alt_id: CHEBI:26619 alt_id: CHEBI:35220 def: "Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites." [] -subset: 3_STAR -synonym: "metabolite" EXACT IUPAC_NAME [IUPAC] -synonym: "metabolites" RELATED [ChEBI] -synonym: "primary metabolites" RELATED [ChEBI] -synonym: "secondary metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "metabolite" EXACT IUPAC:NAME [IUPAC] +synonym: "metabolite" RELATED IUPAC:NAME [iupac] +synonym: "metabolites" RELATED [chebi] +synonym: "primary metabolites" RELATED [chebi] +synonym: "secondary metabolites" RELATED [chebi] is_a: CHEBI:52206 ! biochemical role [Term] id: CHEBI:25213 name: metal cation -subset: 3_STAR -synonym: "a metal cation" RELATED [UniProt] -synonym: "metal cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "a metal cation" RELATED [uniprot_ft] +synonym: "metal cations" RELATED [chebi] is_a: CHEBI:23906 ! monoatomic cation is_a: CHEBI:36915 ! inorganic cation @@ -4513,17 +4717,17 @@ is_a: CHEBI:36915 ! inorganic cation id: CHEBI:25354 name: mineralocorticoid def: "Mineralocorticoids are a class of steroid hormones that regulate water and electrolyte metabolism." [] -subset: 3_STAR -synonym: "mineralocorticoids" RELATED [ChEBI] +subset: 3:STAR +synonym: "mineralocorticoids" RELATED [chebi] is_a: CHEBI:36699 ! corticosteroid hormone [Term] id: CHEBI:25362 name: elemental molecule def: "A molecule all atoms of which have the same atomic number." [] -subset: 3_STAR -synonym: "homoatomic molecule" RELATED [ChEBI] -synonym: "homoatomic molecules" RELATED [ChEBI] +subset: 3:STAR +synonym: "homoatomic molecule" RELATED [chebi] +synonym: "homoatomic molecules" RELATED [chebi] is_a: CHEBI:25367 ! molecule is_a: CHEBI:33259 ! elemental molecular entity @@ -4531,21 +4735,21 @@ is_a: CHEBI:33259 ! elemental molecular entity id: CHEBI:25367 name: molecule def: "Any polyatomic entity that is an electrically neutral entity consisting of more than one atom." [] -subset: 3_STAR -synonym: "molecula" RELATED [IUPAC] -synonym: "molecule" EXACT [IUPAC] -synonym: "molecules" RELATED [IUPAC] -synonym: "Molekuel" RELATED [ChEBI] -synonym: "neutral molecular compounds" RELATED [IUPAC] +subset: 3:STAR +synonym: "molecula" RELATED [iupac] +synonym: "molecule" RELATED [iupac] +synonym: "molecules" RELATED [iupac] +synonym: "Molekuel" RELATED [chebi] +synonym: "neutral molecular compounds" RELATED [iupac] is_a: CHEBI:36357 ! polyatomic entity [Term] id: CHEBI:25375 name: monoamine molecular messenger -def: "A group of neurotransmitters and neuromodulators that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan." [] -subset: 3_STAR -synonym: "monamines" RELATED [ChEBI] -synonym: "monoamines" RELATED [ChEBI] +def: "A group of neurotransmitters and neuromodulators that contain one amino group that is connected to an aromatic ring by ethylene group (‒CH2‒CH2‒). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan." [] +subset: 3:STAR +synonym: "monamines" RELATED [chebi] +synonym: "monoamines" RELATED [chebi] is_a: CHEBI:63534 ! monoamine relationship: RO:0000087 CHEBI:33280 ! has role molecular messenger @@ -4553,26 +4757,26 @@ relationship: RO:0000087 CHEBI:33280 ! has role molecular messenger id: CHEBI:25384 name: monocarboxylic acid def: "An oxoacid containing a single carboxy group." [] -subset: 3_STAR -synonym: "monocarboxylic acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "monocarboxylic acids" RELATED [chebi] is_a: CHEBI:33575 ! carboxylic acid -relationship: is_conjugate_acid_of CHEBI:35757 ! monocarboxylic acid anion +relationship: RO:0018034 CHEBI:35757 ! is protonated form of monocarboxylic acid anion [Term] id: CHEBI:25414 name: monoatomic monocation -subset: 3_STAR -synonym: "monoatomic monocations" RELATED [ChEBI] -synonym: "monovalent inorganic cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "monoatomic monocations" RELATED [chebi] +synonym: "monovalent inorganic cations" RELATED [chebi] is_a: CHEBI:23906 ! monoatomic cation [Term] id: CHEBI:25512 name: neurotransmitter def: "An endogenous compound that is used to transmit information across the synapse between a neuron and another cell." [] -subset: 3_STAR -synonym: "neurotransmitters" RELATED [ChEBI] -xref: Wikipedia:Neurotransmitter +subset: 3:STAR +synonym: "neurotransmitters" RELATED [chebi] +xref: wikipedia.en:Neurotransmitter {source="wikipedia.en"} is_a: CHEBI:33280 ! molecular messenger [Term] @@ -4580,22 +4784,22 @@ id: CHEBI:25513 name: neutral glycosphingolipid alt_id: CHEBI:7543 def: "Any glycosphingolipid containing unsubstituted glycosyl moieties." [] -subset: 3_STAR -synonym: "neutral glycosphingolipids" RELATED [ChEBI] +subset: 3:STAR +synonym: "neutral glycosphingolipids" RELATED [chebi] is_a: CHEBI:24402 ! glycosphingolipid [Term] id: CHEBI:25555 name: nitrogen atom -subset: 3_STAR -synonym: "7N" RELATED [IUPAC] -synonym: "azote" RELATED [IUPAC] -synonym: "N" RELATED [IUPAC] -synonym: "nitrogen" EXACT IUPAC_NAME [IUPAC] -synonym: "nitrogen" RELATED [ChEBI] -synonym: "nitrogeno" RELATED [ChEBI] -synonym: "Stickstoff" RELATED [ChEBI] -xref: WebElements:N +subset: 3:STAR +synonym: "7N" RELATED [iupac] +synonym: "azote" RELATED [iupac] +synonym: "N" RELATED [iupac] +synonym: "nitrogen" EXACT IUPAC:NAME [IUPAC] +synonym: "nitrogen" RELATED IUPAC:NAME [chebi, iupac] +synonym: "nitrogeno" RELATED [chebi] +synonym: "Stickstoff" RELATED [chebi] +xref: webelements:N {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25585 ! nonmetal atom is_a: CHEBI:33300 ! pnictogen @@ -4604,36 +4808,36 @@ relationship: RO:0000087 CHEBI:33937 ! has role macronutrient [Term] id: CHEBI:25585 name: nonmetal atom -subset: 3_STAR -synonym: "Nichtmetall" RELATED [ChEBI] -synonym: "Nichtmetalle" RELATED [ChEBI] -synonym: "no metal" RELATED [ChEBI] -synonym: "no metales" RELATED [ChEBI] -synonym: "non-metal" RELATED [ChEBI] -synonym: "non-metaux" RELATED [ChEBI] -synonym: "nonmetal" EXACT IUPAC_NAME [IUPAC] -synonym: "nonmetal" RELATED [ChEBI] -synonym: "nonmetals" RELATED [ChEBI] +subset: 3:STAR +synonym: "Nichtmetall" RELATED [chebi] +synonym: "Nichtmetalle" RELATED [chebi] +synonym: "no metal" RELATED [chebi] +synonym: "no metales" RELATED [chebi] +synonym: "non-metal" RELATED [chebi] +synonym: "non-metaux" RELATED [chebi] +synonym: "nonmetal" EXACT IUPAC:NAME [IUPAC] +synonym: "nonmetal" RELATED IUPAC:NAME [chebi, iupac] +synonym: "nonmetals" RELATED [chebi] is_a: CHEBI:33250 ! atom [Term] id: CHEBI:25608 name: nucleoside phosphate def: "A nucleobase-containing molecular entity that is a nucleoside in which one or more of the sugar hydroxy groups has been converted into a mono- or poly-phosphate. The term includes both nucleotides and non-nucleotide nucleoside phosphates." [] -subset: 3_STAR -synonym: "NMP" RELATED [KEGG_COMPOUND] -synonym: "nucleoside phosphates" RELATED [ChEBI] -xref: KEGG:C01329 +subset: 3:STAR +synonym: "NMP" RELATED [kegg.compound] +synonym: "nucleoside phosphates" RELATED [chebi] +xref: kegg.compound:C01329 {source="kegg.compound"} is_a: CHEBI:25703 ! organic phosphate is_a: CHEBI:37734 ! phosphoric ester is_a: CHEBI:61120 ! nucleobase-containing molecular entity -relationship: has_functional_parent CHEBI:33838 ! nucleoside +relationship: RO:0018038 CHEBI:33838 ! has functional parent nucleoside [Term] id: CHEBI:25693 name: organic heteromonocyclic compound -subset: 3_STAR -synonym: "organic heteromonocyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic heteromonocyclic compounds" RELATED [chebi] is_a: CHEBI:24532 ! organic heterocyclic compound is_a: CHEBI:33670 ! heteromonocyclic compound @@ -4641,8 +4845,8 @@ is_a: CHEBI:33670 ! heteromonocyclic compound id: CHEBI:25696 name: organic anion def: "Any organic ion with a net negative charge." [] -subset: 3_STAR -synonym: "organic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic anions" RELATED [chebi] is_a: CHEBI:22563 ! anion is_a: CHEBI:25699 ! organic ion @@ -4650,16 +4854,16 @@ is_a: CHEBI:25699 ! organic ion id: CHEBI:25697 name: organic cation def: "Any organic ion with a net positive charge." [] -subset: 3_STAR -synonym: "organic cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic cations" RELATED [chebi] is_a: CHEBI:25699 ! organic ion is_a: CHEBI:36916 ! cation [Term] id: CHEBI:25699 name: organic ion -subset: 3_STAR -synonym: "organic ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic ions" RELATED [chebi] is_a: CHEBI:24870 ! ion is_a: CHEBI:50860 ! organic molecular entity @@ -4667,22 +4871,22 @@ is_a: CHEBI:50860 ! organic molecular entity id: CHEBI:25701 name: organic oxide def: "An oxide in which the oxygen atom is bonded to a carbon atom." [] -subset: 3_STAR -synonym: "organic oxides" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic oxides" RELATED [chebi] is_a: CHEBI:25741 ! oxide is_a: CHEBI:72695 ! organic molecule [Term] id: CHEBI:25703 name: organic phosphate -subset: 3_STAR -synonym: "organic phosphate" EXACT [ChEBI] -synonym: "organic phosphate ester" RELATED [ChEBI] -synonym: "organic phosphate esters" RELATED [ChEBI] -synonym: "organic phosphates" RELATED [ChEBI] -synonym: "organophosphate ester" RELATED [ChEBI] -synonym: "organophosphate esters" RELATED [ChEBI] -xref: Wikipedia:Organophosphate +subset: 3:STAR +synonym: "organic phosphate" RELATED [chebi] +synonym: "organic phosphate ester" RELATED [chebi] +synonym: "organic phosphate esters" RELATED [chebi] +synonym: "organic phosphates" RELATED [chebi] +synonym: "organophosphate ester" RELATED [chebi] +synonym: "organophosphate esters" RELATED [chebi] +xref: wikipedia.en:Organophosphate {source="wikipedia.en"} is_a: CHEBI:25710 ! organophosphorus compound is_a: CHEBI:26020 ! phosphate @@ -4690,19 +4894,19 @@ is_a: CHEBI:26020 ! phosphate id: CHEBI:25704 name: organic sulfate def: "Compounds of the general formula SO3HOR where R is an organyl group" [] -subset: 3_STAR -synonym: "organic sulfates" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic sulfates" RELATED [chebi] is_a: CHEBI:26820 ! sulfates -relationship: is_conjugate_acid_of CHEBI:58958 ! organosulfate oxoanion +relationship: RO:0018034 CHEBI:58958 ! is protonated form of organosulfate oxoanion [Term] id: CHEBI:25710 name: organophosphorus compound def: "An organophosphorus compound is formally a compound containing at least one carbon-phosphorus bond, but the term is often extended to include esters and thioesters." [] -subset: 3_STAR -synonym: "organophosphorus compound" EXACT [ChEBI] -synonym: "organophosphorus compounds" RELATED [ChEBI] -xref: Wikipedia:Organophosphorus_compound +subset: 3:STAR +synonym: "organophosphorus compound" RELATED [chebi] +synonym: "organophosphorus compounds" RELATED [chebi] +xref: wikipedia.en:Organophosphorus_compound {source="wikipedia.en"} is_a: CHEBI:26082 ! phosphorus molecular entity is_a: CHEBI:33285 ! heteroorganic entity @@ -4710,9 +4914,9 @@ is_a: CHEBI:33285 ! heteroorganic entity id: CHEBI:25741 name: oxide def: "An oxide is a chemical compound of oxygen with other chemical elements." [] -subset: 3_STAR -synonym: "oxide" EXACT [ChEBI] -synonym: "oxides" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxide" RELATED [chebi] +synonym: "oxides" RELATED [chebi] is_a: CHEBI:25806 ! oxygen molecular entity is_a: CHEBI:37577 ! heteroatomic molecular entity @@ -4720,26 +4924,26 @@ is_a: CHEBI:37577 ! heteroatomic molecular entity id: CHEBI:25754 name: oxo carboxylic acid def: "Any compound that has an aldehydic or ketonic group as well as a carboxylic acid group in the same molecule." [] -subset: 3_STAR -synonym: "oxo acids" RELATED [IUPAC] -synonym: "oxo carboxylic acids" EXACT IUPAC_NAME [IUPAC] -synonym: "oxo carboxylic acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxo acids" RELATED [iupac] +synonym: "oxo carboxylic acids" EXACT IUPAC:NAME [IUPAC] +synonym: "oxo carboxylic acids" RELATED IUPAC:NAME [chebi, iupac] is_a: CHEBI:33575 ! carboxylic acid -relationship: is_conjugate_acid_of CHEBI:35903 ! oxo carboxylic acid anion +relationship: RO:0018034 CHEBI:35903 ! is protonated form of oxo carboxylic acid anion [Term] id: CHEBI:25805 name: oxygen atom -subset: 3_STAR -synonym: "8O" RELATED [IUPAC] -synonym: "O" RELATED [IUPAC] -synonym: "oxigeno" RELATED [ChEBI] -synonym: "oxygen" EXACT IUPAC_NAME [IUPAC] -synonym: "oxygen" RELATED [ChEBI] -synonym: "oxygene" RELATED [ChEBI] -synonym: "Sauerstoff" RELATED [ChEBI] -xref: KEGG:C00007 -xref: WebElements:O +subset: 3:STAR +synonym: "8O" RELATED [iupac] +synonym: "O" RELATED [iupac] +synonym: "oxigeno" RELATED [chebi] +synonym: "oxygen" EXACT IUPAC:NAME [IUPAC] +synonym: "oxygen" RELATED IUPAC:NAME [chebi, iupac] +synonym: "oxygene" RELATED [chebi] +synonym: "Sauerstoff" RELATED [chebi] +xref: kegg.compound:C00007 {source="kegg.compound"} +xref: webelements:O {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25585 ! nonmetal atom is_a: CHEBI:33303 ! chalcogen @@ -4748,18 +4952,18 @@ relationship: RO:0000087 CHEBI:33937 ! has role macronutrient [Term] id: CHEBI:25806 name: oxygen molecular entity -subset: 3_STAR -synonym: "oxygen molecular entities" RELATED [ChEBI] -synonym: "oxygen molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "oxygen molecular entities" RELATED [chebi] +synonym: "oxygen molecular entity" RELATED [chebi] is_a: CHEBI:33304 ! chalcogen molecular entity relationship: has_part CHEBI:25805 ! oxygen atom [Term] id: CHEBI:25900 name: aldopentose phosphate -subset: 3_STAR -synonym: "aldopentose phosphate" EXACT [ChEBI] -synonym: "aldopentose phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "aldopentose phosphate" RELATED [chebi] +synonym: "aldopentose phosphates" RELATED [chebi] is_a: CHEBI:35131 ! aldose phosphate is_a: CHEBI:84055 ! pentose phosphate @@ -4767,18 +4971,18 @@ is_a: CHEBI:84055 ! pentose phosphate id: CHEBI:25901 name: pentose def: "A five-carbon monosaccharide which in its linear form contains either an aldehyde group at position 1 (aldopentose) or a ketone group at position 2 (ketopentose)." [] -subset: 3_STAR -synonym: "pentose" EXACT [ChEBI] -synonym: "pentoses" RELATED [ChEBI] +subset: 3:STAR +synonym: "pentose" RELATED [chebi] +synonym: "pentoses" RELATED [chebi] is_a: CHEBI:35381 ! monosaccharide [Term] id: CHEBI:25905 name: peptide hormone def: "Any peptide with hormonal activity in animals, whether endocrine, neuroendocrine, or paracrine." [] -subset: 3_STAR -synonym: "peptide hormones" RELATED [ChEBI] -synonym: "polypeptide hormone" RELATED [ChEBI] +subset: 3:STAR +synonym: "peptide hormones" RELATED [chebi] +synonym: "polypeptide hormone" RELATED [chebi] is_a: CHEBI:16670 ! peptide relationship: RO:0000087 CHEBI:24621 ! has role hormone @@ -4786,83 +4990,88 @@ relationship: RO:0000087 CHEBI:24621 ! has role hormone id: CHEBI:25985 name: phenylalanine derivative def: "An amino acid derivative resulting from reaction of alanine at the amino group or the carboxy group, or from the replacement of any hydrogen of phenylalanine by a heteroatom. The definition normally excludes peptides containing phenylalanine residues." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:83821 ! amino-acid derivative -relationship: has_functional_parent CHEBI:28044 ! phenylalanine +relationship: RO:0018038 CHEBI:28044 ! has functional parent phenylalanine [Term] id: CHEBI:26020 name: phosphate def: "Salts and esters of phosphoric and oligophosphoric acids and their chalcogen analogues. In inorganic chemistry, the term is also used to describe anionic coordination entities with phosphorus as central atom." [] -subset: 3_STAR -synonym: "phosphates" EXACT IUPAC_NAME [IUPAC] -synonym: "phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "phosphates" EXACT IUPAC:NAME [IUPAC] +synonym: "phosphates" RELATED IUPAC:NAME [chebi, iupac] is_a: CHEBI:26079 ! phosphoric acid derivative [Term] id: CHEBI:26051 name: phosphoamino acid -subset: 3_STAR -synonym: "phosphoamino acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "phosphoamino acids" RELATED [chebi] is_a: CHEBI:83821 ! amino-acid derivative [Term] id: CHEBI:26078 name: phosphoric acid def: "A phosphorus oxoacid that consists of one oxo and three hydroxy groups joined covalently to a central phosphorus atom." [] -subset: 3_STAR -synonym: "[PO(OH)3]" RELATED [IUPAC] -synonym: "acide phosphorique" RELATED [ChEBI] -synonym: "acidum phosphoricum" RELATED [ChEBI] -synonym: "H3PO4" RELATED [IUPAC] -synonym: "Orthophosphoric acid" RELATED [KEGG_COMPOUND] -synonym: "orthophosphoric acid" RELATED [NIST_Chemistry_WebBook] -synonym: "Phosphate" RELATED [KEGG_COMPOUND] -synonym: "Phosphoric acid" EXACT [KEGG_COMPOUND] -synonym: "phosphoric acid" EXACT [IUPAC] -synonym: "Phosphorsaeure" RELATED [ChEBI] -synonym: "Phosphorsaeureloesungen" RELATED [ChEBI] -synonym: "tetraoxophosphoric acid" EXACT IUPAC_NAME [IUPAC] -synonym: "trihydrogen tetraoxophosphate(3-)" EXACT IUPAC_NAME [IUPAC] -synonym: "trihydroxidooxidophosphorus" EXACT IUPAC_NAME [IUPAC] -xref: CAS:7664-38-2 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:4478 {source="DrugCentral"} -xref: Gmelin:2000 {source="Gmelin"} -xref: HMDB:HMDB0002142 -xref: KEGG:C00009 -xref: KEGG:D05467 -xref: KNApSAcK:C00007408 -xref: PMID:11455380 {source="Europe PMC"} -xref: PMID:15630224 {source="Europe PMC"} -xref: PMID:17439666 {source="Europe PMC"} -xref: PMID:17518491 {source="Europe PMC"} -xref: PMID:22282755 {source="Europe PMC"} -xref: PMID:22333268 {source="Europe PMC"} -xref: PMID:22381614 {source="Europe PMC"} -xref: PMID:22401268 {source="Europe PMC"} -xref: Reaxys:1921286 {source="Reaxys"} -xref: Wikipedia:Phosphoric_Acid +subset: 3:STAR +synonym: "[PO(OH)3]" RELATED [iupac] +synonym: "acide phosphorique" RELATED [chebi] +synonym: "acidum phosphoricum" RELATED [chebi] +synonym: "H3PO4" RELATED [iupac] +synonym: "Orthophosphoric acid" RELATED [kegg.compound] +synonym: "orthophosphoric acid" RELATED [nist] +synonym: "Phosphate" RELATED [kegg.compound] +synonym: "Phosphoric acid" RELATED [kegg.compound] +synonym: "phosphoric acid" RELATED [iupac] +synonym: "Phosphorsaeure" RELATED [chebi] +synonym: "Phosphorsaeureloesungen" RELATED [chebi] +synonym: "tetraoxophosphoric acid" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxophosphoric acid" RELATED IUPAC:NAME [iupac] +synonym: "trihydrogen tetraoxophosphate(3-)" EXACT IUPAC:NAME [IUPAC] +synonym: "trihydrogen tetraoxophosphate(3-)" RELATED IUPAC:NAME [iupac] +synonym: "trihydroxidooxidophosphorus" EXACT IUPAC:NAME [IUPAC] +synonym: "trihydroxidooxidophosphorus" RELATED IUPAC:NAME [iupac] +xref: cas:7664-38-2 {source="cas"} +xref: drugcentral:4478 {source="drugcentral"} +xref: gmelin:2000 {source="gmelin"} +xref: hmdb:HMDB0002142 {source="hmdb"} +xref: kegg.compound:C00009 {source="kegg.compound"} +xref: kegg.drug:D05467 {source="kegg.drug"} +xref: knapsack:C00007408 {source="knapsack"} +xref: pubmed:11455380 {source="pubmed"} +xref: pubmed:15630224 {source="pubmed"} +xref: pubmed:17439666 {source="pubmed"} +xref: pubmed:17518491 {source="pubmed"} +xref: pubmed:22282755 {source="pubmed"} +xref: pubmed:22333268 {source="pubmed"} +xref: pubmed:22381614 {source="pubmed"} +xref: pubmed:22401268 {source="pubmed"} +xref: reaxys:1921286 {source="reaxys"} +xref: wikipedia.en:Phosphoric_Acid {source="wikipedia.en"} is_a: CHEBI:59698 ! phosphoric acids -relationship: is_conjugate_acid_of CHEBI:35780 ! phosphate ion -relationship: is_conjugate_acid_of CHEBI:39745 ! dihydrogenphosphate relationship: RO:0000087 CHEBI:228364 ! has role NMR chemical shift reference compound relationship: RO:0000087 CHEBI:33287 ! has role fertilizer relationship: RO:0000087 CHEBI:46787 ! has role solvent relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:84735 ! has role algal metabolite +relationship: RO:0018034 CHEBI:35780 ! is protonated form of phosphate ion +relationship: RO:0018034 CHEBI:39745 ! is protonated form of dihydrogenphosphate [Term] id: CHEBI:26079 name: phosphoric acid derivative -subset: 1_STAR +subset: 1:STAR +synonym: "phosphoric acid derivatives" RELATED [chebi] +synonym: "phosphoric acids" RELATED [chebi] is_a: CHEBI:36359 ! phosphorus oxoacid derivative -relationship: has_functional_parent CHEBI:26078 ! phosphoric acid +relationship: RO:0018038 CHEBI:26078 ! has functional parent phosphoric acid [Term] id: CHEBI:26082 name: phosphorus molecular entity -subset: 3_STAR -synonym: "phosphorus molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "phosphorus molecular entities" RELATED [chebi] is_a: CHEBI:33302 ! pnictogen molecular entity relationship: has_part CHEBI:28659 ! phosphorus atom @@ -4870,8 +5079,8 @@ relationship: has_part CHEBI:28659 ! phosphorus atom id: CHEBI:26130 name: biological pigment def: "An endogenous molecular entity that results in a colour of an organism as the consequence of the selective absorption of light." [] -subset: 3_STAR -synonym: "pigments" RELATED [ChEBI] +subset: 3:STAR +synonym: "pigments" RELATED [chebi] is_a: CHEBI:52208 ! biophysical role [Term] @@ -4879,23 +5088,24 @@ id: CHEBI:26167 name: polar amino acid alt_id: CHEBI:8283 def: "Any amino acid whose side chain is capable of forming one or more hydrogen bonds." [] -subset: 3_STAR -synonym: "polar amino acid" EXACT [ChEBI] -synonym: "polar amino acids" RELATED [ChEBI] -synonym: "polar amino-acid" RELATED [ChEBI] -synonym: "polar amino-acids" RELATED [ChEBI] -xref: MetaCyc:Polar-amino-acids -xref: PMID:12016058 {source="Europe PMC"} +subset: 3:STAR +synonym: "polar amino acid" RELATED [chebi] +synonym: "polar amino acids" RELATED [chebi] +synonym: "polar amino-acid" RELATED [chebi] +synonym: "polar amino-acids" RELATED [chebi] +xref: metacyc.compound:Polar-amino-acids {source="metacyc.compound"} +xref: pubmed:12016058 {source="pubmed"} is_a: CHEBI:33709 ! amino acid -relationship: is_tautomer_of CHEBI:62031 ! polar amino acid zwitterion +relationship: RO:0018036 CHEBI:62031 ! is tautomer of polar amino acid zwitterion [Term] id: CHEBI:26214 name: porphyrins -def: "Natural pigments containing a fundamental skeleton of four pyrrole nuclei united through the alpha-positions by four methine groups to form a macrocyclic structure." [] -subset: 3_STAR -synonym: "porphyrins" EXACT IUPAC_NAME [IUPAC] -xref: Wikipedia:Porphyrin +def: "Natural pigments containing a fundamental skeleton of four pyrrole nuclei united through the α-positions by four methine groups to form a macrocyclic structure." [] +subset: 3:STAR +synonym: "porphyrins" EXACT IUPAC:NAME [IUPAC] +synonym: "porphyrins" RELATED IUPAC:NAME [iupac] +xref: wikipedia.en:Porphyrin {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:36309 ! cyclic tetrapyrrole relationship: RO:0000087 CHEBI:23357 ! has role cofactor @@ -4903,18 +5113,18 @@ relationship: RO:0000087 CHEBI:23357 ! has role cofactor [Term] id: CHEBI:26216 name: potassium atom -subset: 3_STAR -synonym: "19K" RELATED [IUPAC] -synonym: "K" RELATED [IUPAC] -synonym: "Kalium" RELATED [ChemIDplus] -synonym: "kalium" RELATED [IUPAC] -synonym: "potasio" RELATED [ChEBI] -synonym: "potassium" EXACT IUPAC_NAME [IUPAC] -synonym: "potassium" RELATED [ChEBI] -xref: CAS:7440-09-7 {source="ChemIDplus"} -xref: DrugBank:DB01345 -xref: KEGG:C00238 -xref: WebElements:K +subset: 3:STAR +synonym: "19K" RELATED [iupac] +synonym: "K" RELATED [iupac] +synonym: "Kalium" RELATED [chemidplus] +synonym: "kalium" RELATED [iupac] +synonym: "potasio" RELATED [chebi] +synonym: "potassium" EXACT IUPAC:NAME [IUPAC] +synonym: "potassium" RELATED IUPAC:NAME [chebi, iupac] +xref: cas:7440-09-7 {source="cas"} +xref: drugbank:DB01345 {source="drugbank"} +xref: kegg.compound:C00238 {source="kegg.compound"} +xref: webelements:K {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:22314 ! alkali metal atom relationship: RO:0000087 CHEBI:33937 ! has role macronutrient @@ -4923,9 +5133,9 @@ relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabol [Term] id: CHEBI:26217 name: potassium molecular entity -subset: 3_STAR -synonym: "potassium molecular entities" RELATED [ChEBI] -synonym: "potassium molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "potassium molecular entities" RELATED [chebi] +synonym: "potassium molecular entity" RELATED [chebi] is_a: CHEBI:33296 ! alkali metal molecular entity relationship: has_part CHEBI:26216 ! potassium atom @@ -4933,35 +5143,35 @@ relationship: has_part CHEBI:26216 ! potassium atom id: CHEBI:26386 name: purine nucleobase def: "A nucleobase whose skeleton is derived from purine." [] -subset: 3_STAR -synonym: "a purine nucleobase" RELATED [UniProt] -synonym: "purine bases" RELATED [ChEBI] -synonym: "purine nucleobase" EXACT [ChEBI] -synonym: "purine nucleobases" RELATED [ChEBI] -xref: KEGG:C15587 +subset: 3:STAR +synonym: "a purine nucleobase" RELATED [uniprot_ft] +synonym: "purine bases" RELATED [chebi] +synonym: "purine nucleobase" RELATED [chebi] +synonym: "purine nucleobases" RELATED [chebi] +xref: kegg.compound:C15587 {source="kegg.compound"} is_a: CHEBI:18282 ! nucleobase is_a: CHEBI:26401 ! purines [Term] id: CHEBI:26391 name: purine nucleoside diphosphate -subset: 3_STAR -synonym: "purine nucleoside diphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine nucleoside diphosphates" RELATED [chebi] is_a: CHEBI:16862 ! nucleoside 5'-diphosphate [Term] id: CHEBI:26393 name: purine nucleoside triphosphate -subset: 3_STAR -synonym: "purine nucleoside triphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine nucleoside triphosphates" RELATED [chebi] is_a: CHEBI:17326 ! nucleoside 5'-triphoshate [Term] id: CHEBI:26394 name: purine nucleoside -subset: 3_STAR -synonym: "purine nucleoside" EXACT [ChEBI] -synonym: "purine nucleosides" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine nucleoside" RELATED [chebi] +synonym: "purine nucleosides" RELATED [chebi] is_a: CHEBI:26401 ! purines is_a: CHEBI:33838 ! nucleoside @@ -4969,24 +5179,24 @@ is_a: CHEBI:33838 ! nucleoside id: CHEBI:26395 name: purine nucleotide def: "Any nucleotide that has a purine nucleobase." [] -subset: 3_STAR -synonym: "purine nucleotides" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine nucleotides" RELATED [chebi] is_a: CHEBI:26401 ! purines is_a: CHEBI:36976 ! nucleotide [Term] id: CHEBI:26396 name: purine ribonucleoside diphosphate -subset: 3_STAR -synonym: "purine ribonucleoside diphosphates" RELATED [ChEBI] -is_a: CHEBI:17668 ! ribonucleoside diphosphate +subset: 3:STAR +synonym: "purine ribonucleoside diphosphates" RELATED [chebi] +is_a: CHEBI:17668 ! ribonucleoside diphosphat is_a: CHEBI:26391 ! purine nucleoside diphosphate [Term] id: CHEBI:26398 name: purine ribonucleoside triphosphate -subset: 3_STAR -synonym: "purine ribonucleoside triphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine ribonucleoside triphosphates" RELATED [chebi] is_a: CHEBI:17972 ! ribonucleoside triphosphate is_a: CHEBI:26393 ! purine nucleoside triphosphate @@ -4994,8 +5204,8 @@ is_a: CHEBI:26393 ! purine nucleoside triphosphate id: CHEBI:26399 name: purine ribonucleoside def: "A ribonucleoside that has a purine moiety as the nucleobase (the R group in the illustration)." [] -subset: 3_STAR -synonym: "purine ribonucleosides" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine ribonucleosides" RELATED [chebi] is_a: CHEBI:18254 ! ribonucleoside is_a: CHEBI:26394 ! purine nucleoside @@ -5003,8 +5213,8 @@ is_a: CHEBI:26394 ! purine nucleoside id: CHEBI:26400 name: purine ribonucleotide def: "Any ribonucleotide that has a purine nucleobase." [] -subset: 3_STAR -synonym: "purine ribonucleotides" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine ribonucleotides" RELATED [chebi] is_a: CHEBI:26395 ! purine nucleotide is_a: CHEBI:26561 ! ribonucleotide @@ -5013,88 +5223,88 @@ id: CHEBI:26401 name: purines alt_id: CHEBI:13678 def: "A class of imidazopyrimidines that consists of purine and its substituted derivatives." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:35875 ! imidazopyrimidine [Term] id: CHEBI:26469 name: quaternary nitrogen compound def: "A nitrogen molecular entity that is electronically neutral but which contains a quaternary nitrogen." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:35352 ! organonitrogen compound relationship: has_part CHEBI:35267 ! quaternary ammonium ion [Term] id: CHEBI:26561 name: ribonucleotide -subset: 3_STAR -synonym: "ribonucleotides" RELATED [ChEBI] +subset: 3:STAR +synonym: "ribonucleotides" RELATED [chebi] is_a: CHEBI:26562 ! ribose phosphate is_a: CHEBI:36976 ! nucleotide [Term] id: CHEBI:26562 name: ribose phosphate -subset: 3_STAR -synonym: "ribose phosphate" EXACT [ChEBI] -synonym: "ribose phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "ribose phosphate" RELATED [chebi] +synonym: "ribose phosphates" RELATED [chebi] is_a: CHEBI:25900 ! aldopentose phosphate [Term] id: CHEBI:26607 name: saturated fatty acid def: "Any fatty acid containing no carbon to carbon multiple bonds. Known to produce adverse biological effects when ingested to excess." [] -subset: 3_STAR -synonym: "saturated fatty acid" EXACT [ChEBI] -synonym: "saturated fatty acids" RELATED [ChEBI] -synonym: "SFA" RELATED [ChEBI] -synonym: "SFAs" RELATED [ChEBI] -xref: PMID:16492686 {source="Europe PMC"} -xref: PMID:19763019 {source="Europe PMC"} -xref: PMID:20237329 {source="Europe PMC"} +subset: 3:STAR +synonym: "saturated fatty acid" RELATED [chebi] +synonym: "saturated fatty acids" RELATED [chebi] +synonym: "SFA" RELATED [chebi] +synonym: "SFAs" RELATED [chebi] +xref: pubmed:16492686 {source="pubmed"} +xref: pubmed:19763019 {source="pubmed"} +xref: pubmed:20237329 {source="pubmed"} is_a: CHEBI:35366 ! fatty acid [Term] id: CHEBI:26658 name: sesquiterpenoid def: "Any terpenoid derived from a sesquiterpene. The term includes compounds in which the C15 skeleton of the parent sesquiterpene has been rearranged or modified by the removal of one or more skeletal atoms (generally methyl groups)." [] -subset: 3_STAR -synonym: "sesquiterpenoides" RELATED [ChEBI] -synonym: "sesquiterpenoids" RELATED [ChEBI] -xref: LIPID_MAPS_class:LMPR0103 {source="LIPID MAPS"} +subset: 3:STAR +synonym: "sesquiterpenoides" RELATED [chebi] +synonym: "sesquiterpenoids" RELATED [chebi] +xref: lipidmaps_class:LMPR0103 {source="lipidmaps_class"} is_a: CHEBI:26873 ! terpenoid -relationship: has_parent_hydride CHEBI:35189 ! sesquiterpene +relationship: RO:0018040 CHEBI:35189 ! has parent hydride sesquiterpene [Term] id: CHEBI:26666 name: short-chain fatty acid -def: "An aliphatic monocarboxylic acid with a chain length of less than C6. If any non-hydrocarbon substituent is present, the compound is not normally regarded as a short-chain fatty acid." [] -subset: 3_STAR -synonym: "SCFA" RELATED [ChEBI] -synonym: "SCFAs" RELATED [ChEBI] -synonym: "short-chain fatty acids" RELATED [ChEBI] -xref: PMID:16633129 {source="Europe PMC"} -xref: PMID:16870803 {source="Europe PMC"} -xref: PMID:18203540 {source="Europe PMC"} -xref: PMID:20148677 {source="Europe PMC"} +def: "An aliphatic monocarboxylic acid with a chain length of less than C6. If any non-hydrocarbon substituent is present, the compound is not normally regarded as a short-chain fatty acid." [] +subset: 3:STAR +synonym: "SCFA" RELATED [chebi] +synonym: "SCFAs" RELATED [chebi] +synonym: "short-chain fatty acids" RELATED [chebi] +xref: pubmed:16633129 {source="pubmed"} +xref: pubmed:16870803 {source="pubmed"} +xref: pubmed:18203540 {source="pubmed"} +xref: pubmed:20148677 {source="pubmed"} is_a: CHEBI:35366 ! fatty acid -relationship: is_conjugate_acid_of CHEBI:58951 ! short-chain fatty acid anion +relationship: RO:0018034 CHEBI:58951 ! is protonated form of short-chain fatty acid anion [Term] id: CHEBI:26708 name: sodium atom -subset: 3_STAR -synonym: "11Na" RELATED [IUPAC] -synonym: "Na" RELATED [IUPAC] -synonym: "Natrium" RELATED [ChemIDplus] -synonym: "natrium" RELATED [IUPAC] -synonym: "sodio" RELATED [ChemIDplus] -synonym: "sodium" EXACT IUPAC_NAME [IUPAC] -synonym: "sodium" RELATED [ChEBI] -xref: CAS:7440-23-5 {source="ChemIDplus"} -xref: Gmelin:16221 {source="Gmelin"} -xref: KEGG:C01330 -xref: WebElements:Na +subset: 3:STAR +synonym: "11Na" RELATED [iupac] +synonym: "Na" RELATED [iupac] +synonym: "Natrium" RELATED [chemidplus] +synonym: "natrium" RELATED [iupac] +synonym: "sodio" RELATED [chemidplus] +synonym: "sodium" EXACT IUPAC:NAME [IUPAC] +synonym: "sodium" RELATED IUPAC:NAME [chebi, iupac] +xref: cas:7440-23-5 {source="cas"} +xref: gmelin:16221 {source="gmelin"} +xref: kegg.compound:C01330 {source="kegg.compound"} +xref: webelements:Na {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:22314 ! alkali metal atom relationship: RO:0000087 CHEBI:33937 ! has role macronutrient @@ -5103,9 +5313,9 @@ relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabol [Term] id: CHEBI:26712 name: sodium molecular entity -subset: 3_STAR -synonym: "sodium compounds" RELATED [ChEBI] -synonym: "sodium molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "sodium compounds" RELATED [chebi] +synonym: "sodium molecular entities" RELATED [chebi] is_a: CHEBI:33296 ! alkali metal molecular entity relationship: has_part CHEBI:26708 ! sodium atom @@ -5113,10 +5323,10 @@ relationship: has_part CHEBI:26708 ! sodium atom id: CHEBI:26714 name: sodium salt def: "Any alkali metal salt having sodium(1+) as the cation." [] -subset: 3_STAR -synonym: "Natriumsalz" RELATED [ChEBI] -synonym: "Natriumsalze" RELATED [ChEBI] -synonym: "sodium salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "Natriumsalz" RELATED [chebi] +synonym: "Natriumsalze" RELATED [chebi] +synonym: "sodium salts" RELATED [chebi] is_a: CHEBI:26712 ! sodium molecular entity is_a: CHEBI:35479 ! alkali metal salt relationship: has_part CHEBI:29101 ! sodium(1+) @@ -5125,8 +5335,8 @@ relationship: has_part CHEBI:29101 ! sodium(1+) id: CHEBI:26739 name: sphingolipid def: "Sphingolipids are a complex family of compounds that share a common structural feature, a sphingoid base backbone." [] -subset: 3_STAR -synonym: "sphingolipids" RELATED [ChEBI] +subset: 3:STAR +synonym: "sphingolipids" RELATED [chebi] is_a: CHEBI:18059 ! lipid is_a: CHEBI:35352 ! organonitrogen compound is_a: CHEBI:36963 ! organooxygen compound @@ -5135,14 +5345,14 @@ is_a: CHEBI:36963 ! organooxygen compound id: CHEBI:26764 name: steroid hormone def: "Any steroid that acts as hormone." [] -subset: 3_STAR -synonym: "hormona esteroide" RELATED [ChEBI] -synonym: "hormonas esteroideas" RELATED [ChEBI] -synonym: "hormone steroide" RELATED [ChEBI] -synonym: "hormones steroides" RELATED [ChEBI] -synonym: "steroid hormones" RELATED [ChEBI] -synonym: "Steroidhormon" RELATED [ChEBI] -synonym: "Steroidhormone" RELATED [ChEBI] +subset: 3:STAR +synonym: "hormona esteroide" RELATED [chebi] +synonym: "hormonas esteroideas" RELATED [chebi] +synonym: "hormone steroide" RELATED [chebi] +synonym: "hormones steroides" RELATED [chebi] +synonym: "steroid hormones" RELATED [chebi] +synonym: "Steroidhormon" RELATED [chebi] +synonym: "Steroidhormone" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35341 ! steroid relationship: RO:0000087 CHEBI:24621 ! has role hormone @@ -5150,8 +5360,8 @@ relationship: RO:0000087 CHEBI:24621 ! has role hormone [Term] id: CHEBI:26816 name: carbohydrate phosphate -subset: 3_STAR -synonym: "carbohydrate phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate phosphates" RELATED [chebi] is_a: CHEBI:25703 ! organic phosphate is_a: CHEBI:37734 ! phosphoric ester is_a: CHEBI:63299 ! carbohydrate derivative @@ -5160,10 +5370,10 @@ is_a: CHEBI:63299 ! carbohydrate derivative id: CHEBI:26819 name: sulfuric ester def: "An ester of an alcohol and sulfuric acid." [] -subset: 3_STAR -synonym: "sulfate ester" RELATED [ChEBI] -synonym: "sulfuric acid ester" RELATED [ChEBI] -synonym: "sulfuric acid esters" RELATED [ChEBI] +subset: 3:STAR +synonym: "sulfate ester" RELATED [chebi] +synonym: "sulfuric acid ester" RELATED [chebi] +synonym: "sulfuric acid esters" RELATED [chebi] is_a: CHEBI:35701 ! ester is_a: CHEBI:37826 ! sulfuric acid derivative @@ -5171,31 +5381,31 @@ is_a: CHEBI:37826 ! sulfuric acid derivative id: CHEBI:26820 name: sulfates def: "Salts and esters of sulfuric acid" [] -subset: 3_STAR -synonym: "sulfates" EXACT [ChEBI] -synonym: "sulfuric acid derivative" RELATED [ChEBI] -synonym: "sulphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "sulfates" RELATED [chebi] +synonym: "sulfuric acid derivative" RELATED [chebi] +synonym: "sulphates" RELATED [chebi] is_a: CHEBI:37826 ! sulfuric acid derivative [Term] id: CHEBI:26833 name: sulfur atom -subset: 3_STAR -synonym: "16S" RELATED [IUPAC] -synonym: "azufre" RELATED [ChEBI] -synonym: "Elemental sulfur" RELATED [KEGG_COMPOUND] -synonym: "S" RELATED [IUPAC, KEGG_COMPOUND] -synonym: "Schwefel" RELATED [ChEBI] -synonym: "soufre" RELATED [ChEBI] -synonym: "sulfur" EXACT IUPAC_NAME [IUPAC] -synonym: "sulfur" RELATED [ChEBI, UniProt] -synonym: "sulphur" RELATED [ChEBI] -synonym: "theion" RELATED [IUPAC] -xref: CAS:7704-34-9 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: KEGG:C00087 -xref: KEGG:D06527 -xref: PPDB:605 -xref: WebElements:S +subset: 3:STAR +synonym: "16S" RELATED [iupac] +synonym: "azufre" RELATED [chebi] +synonym: "Elemental sulfur" RELATED [kegg.compound] +synonym: "S" RELATED [iupac, kegg.compound] +synonym: "Schwefel" RELATED [chebi] +synonym: "soufre" RELATED [chebi] +synonym: "sulfur" EXACT IUPAC:NAME [IUPAC] +synonym: "sulfur" RELATED IUPAC:NAME [chebi, iupac, uniprot_ft] +synonym: "sulphur" RELATED [chebi] +synonym: "theion" RELATED [iupac] +xref: cas:7704-34-9 {source="cas"} +xref: kegg.compound:C00087 {source="kegg.compound"} +xref: kegg.drug:D06527 {source="kegg.drug"} +xref: ppdb:605 {source="ppdb"} +xref: webelements:S {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25585 ! nonmetal atom is_a: CHEBI:33303 ! chalcogen @@ -5204,9 +5414,9 @@ relationship: RO:0000087 CHEBI:33937 ! has role macronutrient [Term] id: CHEBI:26835 name: sulfur molecular entity -subset: 3_STAR -synonym: "sulfur molecular entities" RELATED [ChEBI] -synonym: "sulfur molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "sulfur molecular entities" RELATED [chebi] +synonym: "sulfur molecular entity" RELATED [chebi] is_a: CHEBI:33304 ! chalcogen molecular entity relationship: has_part CHEBI:26833 ! sulfur atom @@ -5214,63 +5424,70 @@ relationship: has_part CHEBI:26833 ! sulfur atom id: CHEBI:26836 name: sulfuric acid def: "A sulfur oxoacid that consists of two oxo and two hydroxy groups joined covalently to a central sulfur atom." [] -subset: 3_STAR -synonym: "[S(OH)2O2]" RELATED [MolBase] -synonym: "[SO2(OH)2]" RELATED [IUPAC] -synonym: "Acide sulfurique" RELATED [ChemIDplus] -synonym: "Acido sulfurico" RELATED [ChemIDplus] -synonym: "Acidum sulfuricum" RELATED [ChemIDplus] -synonym: "dihydrogen tetraoxosulfate" EXACT IUPAC_NAME [IUPAC] -synonym: "dihydroxidodioxidosulfur" EXACT IUPAC_NAME [IUPAC] -synonym: "H2SO4" RELATED [IUPAC] -synonym: "hydrogen tetraoxosulfate(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogen tetraoxosulfate(VI)" EXACT IUPAC_NAME [IUPAC] -synonym: "Schwefelsaeureloesungen" RELATED [ChemIDplus] -synonym: "Sulfuric acid" EXACT [KEGG_COMPOUND] -synonym: "sulfuric acid" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "sulphuric acid" RELATED [MolBase] -synonym: "tetraoxosulfuric acid" EXACT IUPAC_NAME [IUPAC] -xref: CAS:7664-93-9 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Gmelin:2122 {source="Gmelin"} -xref: KEGG:C00059 -xref: KEGG:D05963 -xref: KNApSAcK:C00007530 -xref: MolBase:4 -xref: PMID:13568755 {source="Europe PMC"} -xref: PMID:16122922 {source="Europe PMC"} -xref: PMID:19397353 {source="Europe PMC"} -xref: PMID:22047659 {source="Europe PMC"} -xref: PMID:22136045 {source="Europe PMC"} -xref: PMID:22204399 {source="Europe PMC"} -xref: PMID:22267186 {source="Europe PMC"} -xref: PMID:22296037 {source="Europe PMC"} -xref: PMID:22364556 {source="Europe PMC"} -xref: PMID:22435616 {source="Europe PMC"} -xref: PPDB:606 -xref: Reaxys:2037554 {source="Reaxys"} -xref: Wikipedia:Sulfuric_acid +subset: 3:STAR +synonym: "[S(OH)2O2]" RELATED [molbase] +synonym: "[SO2(OH)2]" RELATED [iupac] +synonym: "Acide sulfurique" RELATED [chemidplus] +synonym: "Acido sulfurico" RELATED [chemidplus] +synonym: "Acidum sulfuricum" RELATED [chemidplus] +synonym: "dihydrogen tetraoxosulfate" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydrogen tetraoxosulfate" RELATED IUPAC:NAME [iupac] +synonym: "dihydroxidodioxidosulfur" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydroxidodioxidosulfur" RELATED IUPAC:NAME [iupac] +synonym: "H2SO4" RELATED [iupac] +synonym: "hydrogen tetraoxosulfate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen tetraoxosulfate(2-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogen tetraoxosulfate(VI)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen tetraoxosulfate(VI)" RELATED IUPAC:NAME [iupac] +synonym: "Schwefelsaeureloesungen" RELATED [chemidplus] +synonym: "Sulfuric acid" RELATED [kegg.compound] +synonym: "sulfuric acid" EXACT IUPAC:NAME [IUPAC] +synonym: "sulfuric acid" RELATED IUPAC:NAME [chebi, iupac] +synonym: "sulphuric acid" RELATED [molbase] +synonym: "tetraoxosulfuric acid" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraoxosulfuric acid" RELATED IUPAC:NAME [iupac] +xref: cas:7664-93-9 {source="cas"} +xref: gmelin:2122 {source="gmelin"} +xref: kegg.compound:C00059 {source="kegg.compound"} +xref: kegg.drug:D05963 {source="kegg.drug"} +xref: knapsack:C00007530 {source="knapsack"} +xref: molbase:4 {source="molbase"} +xref: ppdb:606 {source="ppdb"} +xref: pubmed:13568755 {source="pubmed"} +xref: pubmed:16122922 {source="pubmed"} +xref: pubmed:19397353 {source="pubmed"} +xref: pubmed:22047659 {source="pubmed"} +xref: pubmed:22136045 {source="pubmed"} +xref: pubmed:22204399 {source="pubmed"} +xref: pubmed:22267186 {source="pubmed"} +xref: pubmed:22296037 {source="pubmed"} +xref: pubmed:22364556 {source="pubmed"} +xref: pubmed:22435616 {source="pubmed"} +xref: reaxys:2037554 {source="reaxys"} +xref: wikipedia.en:Sulfuric_acid {source="wikipedia.en"} is_a: CHEBI:33402 ! sulfur oxoacid -relationship: is_conjugate_acid_of CHEBI:45696 ! hydrogensulfate relationship: RO:0000087 CHEBI:35223 ! has role catalyst +relationship: RO:0018034 CHEBI:45696 ! is protonated form of hydrogensulfate [Term] id: CHEBI:26873 name: terpenoid def: "Any isoprenoid that is a natural product or related compound formally derived from isoprene units. Terpenoids may contain oxygen in various functional groups. This class is subdivided according to the number of carbon atoms in the parent terpene. The skeleton of terpenoids may differ from strict additivity of isoprene units by the loss or shift of a fragment, generally a methyl group." [] -subset: 3_STAR -synonym: "Terpenoid" EXACT [ChEBI] -synonym: "terpenoide" RELATED [IUPAC] -synonym: "terpenoides" RELATED [IUPAC] -synonym: "terpenoids" EXACT IUPAC_NAME [IUPAC] -xref: Wikipedia:Terpenoid +subset: 3:STAR +synonym: "Terpenoid" RELATED [chebi] +synonym: "terpenoide" RELATED [iupac] +synonym: "terpenoides" RELATED [iupac] +synonym: "terpenoids" EXACT IUPAC:NAME [IUPAC] +synonym: "terpenoids" RELATED IUPAC:NAME [iupac] +xref: wikipedia.en:Terpenoid {source="wikipedia.en"} is_a: CHEBI:24913 ! isoprenoid -relationship: has_parent_hydride CHEBI:35186 ! terpene +relationship: RO:0018040 CHEBI:35186 ! has parent hydride terpene [Term] id: CHEBI:26912 name: oxolanes def: "Any oxacycle having an oxolane (tetrahydrofuran) skeleton." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:25693 ! organic heteromonocyclic compound is_a: CHEBI:38104 ! oxacycle @@ -5278,10 +5495,12 @@ is_a: CHEBI:38104 ! oxacycle id: CHEBI:26932 name: tetrapyrrole def: "A natural pigment containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next." [] -subset: 3_STAR -synonym: "a tetrapyrrole" RELATED [UniProt] -synonym: "tetrapyrrole" EXACT IUPAC_NAME [IUPAC] -synonym: "tetrapyrroles" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "a tetrapyrrole" RELATED [uniprot_ft] +synonym: "tetrapyrrole" EXACT IUPAC:NAME [IUPAC] +synonym: "tetrapyrrole" RELATED IUPAC:NAME [iupac] +synonym: "tetrapyrroles" EXACT IUPAC:NAME [IUPAC] +synonym: "tetrapyrroles" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33833 ! heteroarene is_a: CHEBI:38077 ! polypyrrole @@ -5289,106 +5508,109 @@ is_a: CHEBI:38077 ! polypyrrole id: CHEBI:26935 name: tetraterpenoid def: "Any terpenoid derived from a tetraterpene. The term includes compounds in which the C40 skeleton of the parent tetraterpene has been rearranged or modified by the removal of one or more skeletal atoms (generally methyl groups)." [] -subset: 3_STAR -synonym: "C40 isoprenoids" RELATED [LIPID_MAPS] -synonym: "tetraterpenoides" RELATED [ChEBI] -synonym: "tetraterpenoids" EXACT IUPAC_NAME [IUPAC] -xref: LIPID_MAPS_class:LMPR0107 {source="LIPID MAPS"} +subset: 3:STAR +synonym: "C40 isoprenoids" RELATED [lipidmaps] +synonym: "tetraterpenoides" RELATED [chebi] +synonym: "tetraterpenoids" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraterpenoids" RELATED IUPAC:NAME [iupac] +xref: lipidmaps_class:LMPR0107 {source="lipidmaps_class"} is_a: CHEBI:26873 ! terpenoid -relationship: has_parent_hydride CHEBI:35193 ! tetraterpene +relationship: RO:0018040 CHEBI:35193 ! has parent hydride tetraterpene [Term] id: CHEBI:27024 name: toluenes def: "Any member of the class of benzenes that is a substituted benzene in which the substituents include one (and only one) methyl group." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:22712 ! benzenes [Term] id: CHEBI:27027 name: micronutrient def: "Any nutrient required in small quantities by organisms throughout their life in order to orchestrate a range of physiological functions." [] -subset: 3_STAR -synonym: "micronutrients" RELATED [ChEBI] -synonym: "trace elements" RELATED [ChEBI] -xref: Wikipedia:Micronutrient +subset: 3:STAR +synonym: "micronutrients" RELATED [chebi] +synonym: "trace elements" RELATED [chebi] +xref: wikipedia.en:Micronutrient {source="wikipedia.en"} is_a: CHEBI:33284 ! nutrient [Term] id: CHEBI:27081 name: transition element atom def: "An element whose atom has an incomplete d sub-shell, or which can give rise to cations with an incomplete d sub-shell." [] -subset: 3_STAR -synonym: "metal de transicion" RELATED [ChEBI] -synonym: "metal de transition" RELATED [ChEBI] -synonym: "metales de transicion" RELATED [ChEBI] -synonym: "metaux de transition" RELATED [ChEBI] -synonym: "transition element" EXACT IUPAC_NAME [IUPAC] -synonym: "transition element" RELATED [ChEBI] -synonym: "transition elements" RELATED [ChEBI] -synonym: "transition metal" RELATED [ChEBI] -synonym: "transition metals" RELATED [ChEBI] -synonym: "Uebergangselement" RELATED [ChEBI] -synonym: "Uebergangsmetalle" RELATED [ChEBI] +subset: 3:STAR +synonym: "metal de transicion" RELATED [chebi] +synonym: "metal de transition" RELATED [chebi] +synonym: "metales de transicion" RELATED [chebi] +synonym: "metaux de transition" RELATED [chebi] +synonym: "transition element" EXACT IUPAC:NAME [IUPAC] +synonym: "transition element" RELATED IUPAC:NAME [chebi, iupac] +synonym: "transition elements" RELATED [chebi] +synonym: "transition metal" RELATED [chebi] +synonym: "transition metals" RELATED [chebi] +synonym: "Uebergangselement" RELATED [chebi] +synonym: "Uebergangsmetalle" RELATED [chebi] is_a: CHEBI:33521 ! metal atom [Term] id: CHEBI:27162 name: tryptamines def: "Tryptamine and its substitution derivatives." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24828 ! indoles [Term] id: CHEBI:27171 name: organic heterobicyclic compound -subset: 3_STAR -synonym: "heterobicyclic compounds" RELATED [ChEBI] -synonym: "organic heterobicyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "heterobicyclic compounds" RELATED [chebi] +synonym: "organic heterobicyclic compounds" RELATED [chebi] is_a: CHEBI:33672 ! heterobicyclic compound is_a: CHEBI:38166 ! organic heteropolycyclic compound [Term] id: CHEBI:27177 name: L-tyrosine derivative -def: "A proteinogenic amino acid derivative resulting from reaction of L-tyrosine at the amino group or the carboxy group, or from the replacement of any hydrogen of L-tyrosine by a heteroatom." [] -subset: 3_STAR -synonym: "L-tyrosine derivatives" RELATED [ChEBI] +def: "A proteinogenic amino acid derivative resulting from reaction of L-tyrosine at the amino group or the carboxy group, or from the replacement of any hydrogen of L-tyrosine by a heteroatom." [] +subset: 3:STAR +synonym: "L-tyrosine derivatives" RELATED [chebi] is_a: CHEBI:62761 ! tyrosine derivative is_a: CHEBI:84144 ! L-phenylalanine derivative -relationship: has_functional_parent CHEBI:17895 ! L-tyrosine +relationship: RO:0018038 CHEBI:17895 ! has functional parent L-tyrosine [Term] id: CHEBI:27207 name: univalent carboacyl group def: "A univalent carboacyl group is a group formed by loss of OH from the carboxy group of a carboxylic acid." [] -subset: 3_STAR -synonym: "univalent acyl group" RELATED [ChEBI] -synonym: "univalent carboacyl groups" RELATED [ChEBI] -synonym: "univalent carboxylic acyl groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "univalent acyl group" RELATED [chebi] +synonym: "univalent carboacyl groups" RELATED [chebi] +synonym: "univalent carboxylic acyl groups" RELATED [chebi] is_a: CHEBI:37838 ! carboacyl group [Term] id: CHEBI:27325 name: xanthophyll def: "A subclass of carotenoids consisting of the oxygenated carotenes." [] -subset: 3_STAR -synonym: "xanthophylls" EXACT IUPAC_NAME [IUPAC] -synonym: "xanthophylls" RELATED [ChEBI] -xref: DrugBank:DB00137 +subset: 3:STAR +synonym: "xanthophylls" EXACT IUPAC:NAME [IUPAC] +synonym: "xanthophylls" RELATED IUPAC:NAME [chebi, iupac] +xref: drugbank:DB00137 {source="drugbank"} is_a: CHEBI:23044 ! carotenoid [Term] id: CHEBI:27369 name: zwitterion def: "A neutral compound having formal unit electrical charges of opposite sign on non-adjacent atoms. Sometimes referred to as inner salts, dipolar ions (a misnomer)." [] -subset: 3_STAR -synonym: "compose zwitterionique" RELATED [IUPAC] -synonym: "compuestos zwitterionicos" RELATED [IUPAC] -synonym: "zwitterion" EXACT IUPAC_NAME [IUPAC] -synonym: "zwitteriones" RELATED [IUPAC] -synonym: "zwitterionic compounds" RELATED [IUPAC] -synonym: "zwitterions" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "compose zwitterionique" RELATED [iupac] +synonym: "compuestos zwitterionicos" RELATED [iupac] +synonym: "zwitterion" EXACT IUPAC:NAME [IUPAC] +synonym: "zwitterion" RELATED IUPAC:NAME [iupac] +synonym: "zwitteriones" RELATED [iupac] +synonym: "zwitterionic compounds" RELATED [iupac] +synonym: "zwitterions" EXACT IUPAC:NAME [IUPAC] +synonym: "zwitterions" RELATED IUPAC:NAME [iupac] is_a: CHEBI:51151 ! dipolar compound [Term] @@ -5396,27 +5618,28 @@ id: CHEBI:27547 name: zeaxanthin alt_id: CHEBI:10108 alt_id: CHEBI:27361 -subset: 3_STAR -synonym: "(3R,3'R)-beta,beta-carotene-3,3'-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "(3R,3'R)-dihydroxy-beta,beta-carotene" RELATED [ChEBI] -synonym: "all-trans-beta-carotene-3,3'-diol" RELATED [ChEBI] -synonym: "all-trans-zeaxanthin" RELATED [UniProt] -synonym: "anchovyxanthin" RELATED [ChEBI] -synonym: "beta,beta-carotene-3,3'-diol" RELATED [ChEBI] -synonym: "Zeaxanthin" EXACT [KEGG_COMPOUND] -xref: Beilstein:2068416 {source="Beilstein"} -xref: CAS:144-68-3 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: KEGG:C06098 -xref: KNApSAcK:C00000931 -xref: LIPID_MAPS_instance:LMPR01070261 {source="LIPID MAPS"} -xref: MetaCyc:CPD1F-130 -xref: Wikipedia:Zeaxanthin +subset: 3:STAR +synonym: "(3R,3'R)-beta,beta-carotene-3,3'-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "(3R,3'R)-beta,beta-carotene-3,3'-diol" RELATED IUPAC:NAME [iupac] +synonym: "(3R,3'R)-dihydroxy-beta,beta-carotene" RELATED [chebi] +synonym: "all-trans-beta-carotene-3,3'-diol" RELATED [chebi] +synonym: "all-trans-zeaxanthin" RELATED [uniprot_ft] +synonym: "anchovyxanthin" RELATED [chebi] +synonym: "beta,beta-carotene-3,3'-diol" RELATED [chebi] +synonym: "Zeaxanthin" RELATED [kegg.compound] +xref: beilstein:2068416 {source="beilstein"} +xref: cas:144-68-3 {source="cas"} +xref: kegg.compound:C06098 {source="kegg.compound"} +xref: knapsack:C00000931 {source="knapsack"} +xref: lipidmaps:LMPR01070261 {source="lipidmaps"} +xref: metacyc.compound:CPD1F-130 {source="metacyc.compound"} +xref: wikipedia.en:Zeaxanthin {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:23045 ! carotenol -relationship: has_parent_hydride CHEBI:17579 ! beta-carotene relationship: RO:0000087 CHEBI:22586 ! has role antioxidant relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:76969 ! has role bacterial metabolite +relationship: RO:0018040 CHEBI:17579 ! has parent hydride beta-carotene [Term] id: CHEBI:27584 @@ -5425,25 +5648,26 @@ alt_id: CHEBI:22306 alt_id: CHEBI:2563 alt_id: CHEBI:40919 def: "A pregnane-based steroidal hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney." [] -subset: 3_STAR -synonym: "(+)-aldosterone" RELATED [NIST_Chemistry_WebBook] -synonym: "(11beta)-11,21-dihydroxy-3,20-dioxopregn-4-en-18-al" RELATED [NIST_Chemistry_WebBook] -synonym: "11beta,21-Dihydroxy-3,20-dioxo-4-pregnen-18-al" RELATED [KEGG_COMPOUND] -synonym: "11beta,21-dihydroxy-3,20-dioxopregn-4-en-18-al" EXACT IUPAC_NAME [IUPAC] -synonym: "ALDOSTERONE" EXACT [PDBeChem] -synonym: "Aldosterone" EXACT [KEGG_COMPOUND] -synonym: "aldosterone" EXACT [UniProt] -xref: CAS:52-39-1 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:111 {source="DrugCentral"} -xref: DrugBank:DB04630 -xref: HMDB:HMDB0000037 -xref: KEGG:C01780 -xref: LINCS:LSM-42770 -xref: LIPID_MAPS_instance:LMST02030026 {source="LIPID MAPS"} -xref: PDBeChem:AS4 -xref: PMID:10438974 {source="Europe PMC"} -xref: Reaxys:3224996 {source="Reaxys"} -xref: Wikipedia:Aldosterone +subset: 3:STAR +synonym: "(+)-aldosterone" RELATED [nist] +synonym: "(11beta)-11,21-dihydroxy-3,20-dioxopregn-4-en-18-al" RELATED [nist] +synonym: "11beta,21-Dihydroxy-3,20-dioxo-4-pregnen-18-al" RELATED [kegg.compound] +synonym: "11beta,21-dihydroxy-3,20-dioxopregn-4-en-18-al" EXACT IUPAC:NAME [IUPAC] +synonym: "11beta,21-dihydroxy-3,20-dioxopregn-4-en-18-al" RELATED IUPAC:NAME [iupac] +synonym: "ALDOSTERONE" RELATED [pdb-ccd] +synonym: "Aldosterone" RELATED [kegg.compound] +synonym: "aldosterone" RELATED [uniprot_ft] +xref: cas:52-39-1 {source="cas"} +xref: drugbank:DB04630 {source="drugbank"} +xref: drugcentral:111 {source="drugcentral"} +xref: hmdb:HMDB0000037 {source="hmdb"} +xref: kegg.compound:C01780 {source="kegg.compound"} +xref: lincs.smallmolecule:LSM-42770 {source="lincs.smallmolecule"} +xref: lipidmaps:LMST02030026 {source="lipidmaps"} +xref: pdb-ccd:AS4 {source="pdb-ccd"} +xref: pubmed:10438974 {source="pubmed"} +xref: reaxys:3224996 {source="reaxys"} +xref: wikipedia.en:Aldosterone {source="wikipedia.en"} is_a: CHEBI:131565 ! steroid aldehyde is_a: CHEBI:139590 ! primary alpha-hydroxy ketone is_a: CHEBI:25354 ! mineralocorticoid @@ -5453,28 +5677,29 @@ is_a: CHEBI:36885 ! 20-oxo steroid is_a: CHEBI:36887 ! 18-oxo steroid is_a: CHEBI:47909 ! 3-oxo-Delta(4) steroid is_a: CHEBI:64600 ! C21-steroid hormone -relationship: has_parent_hydride CHEBI:8386 ! pregnane relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018040 CHEBI:8386 ! has parent hydride pregnane [Term] id: CHEBI:27594 name: carbon atom alt_id: CHEBI:23009 alt_id: CHEBI:3399 -subset: 3_STAR -synonym: "6C" RELATED [IUPAC] -synonym: "C" RELATED [IUPAC, KEGG_COMPOUND] -synonym: "Carbon" RELATED [KEGG_COMPOUND] -synonym: "carbon" EXACT IUPAC_NAME [IUPAC] -synonym: "carbon" RELATED [ChEBI] -synonym: "carbone" RELATED [ChEBI] -synonym: "carbonium" RELATED [ChEBI] -synonym: "carbono" RELATED [ChEBI] -synonym: "Kohlenstoff" RELATED [ChEBI] -xref: CAS:7440-44-0 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: KEGG:C06265 -xref: WebElements:C +subset: 3:STAR +synonym: "6C" RELATED [iupac] +synonym: "C" RELATED [iupac, kegg.compound] +synonym: "Carbon" EXACT [KEGG_COMPOUND] +synonym: "Carbon" RELATED [kegg.compound] +synonym: "carbon" EXACT IUPAC:NAME [IUPAC] +synonym: "carbon" RELATED IUPAC:NAME [chebi, iupac] +synonym: "carbone" RELATED [chebi] +synonym: "carbonium" RELATED [chebi] +synonym: "carbono" RELATED [chebi] +synonym: "Kohlenstoff" RELATED [chebi] +xref: cas:7440-44-0 {source="cas"} +xref: kegg.compound:C06265 {source="kegg.compound"} +xref: webelements:C {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25585 ! nonmetal atom is_a: CHEBI:33306 ! carbon group element atom @@ -5487,16 +5712,16 @@ alt_id: CHEBI:26750 alt_id: CHEBI:26751 alt_id: CHEBI:9251 def: "The most important reserve polysaccharide found in plants. It is a glucan consisting of amylose and amylopectin." [] -subset: 3_STAR -synonym: "amidon" RELATED [ChEBI] -synonym: "amylum" RELATED [ChEBI] -synonym: "Staerke" RELATED [ChEBI] -synonym: "Starch" EXACT [KEGG_COMPOUND] -xref: CAS:9005-25-8 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: KEGG:C00369 -xref: KEGG:D06507 -xref: KEGG:G10545 -xref: Wikipedia:Starch +subset: 3:STAR +synonym: "amidon" RELATED [chebi] +synonym: "amylum" RELATED [chebi] +synonym: "Staerke" RELATED [chebi] +synonym: "Starch" RELATED [kegg.compound] +xref: cas:9005-25-8 {source="cas"} +xref: kegg.compound:C00369 {source="kegg.compound"} +xref: kegg.drug:D06507 {source="kegg.drug"} +xref: kegg.glycan:G10545 {source="kegg.glycan"} +xref: wikipedia.en:Starch {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:37163 ! glucan relationship: has_part CHEBI:28057 ! amylopectin @@ -5509,40 +5734,43 @@ name: phenylalanine alt_id: CHEBI:25984 alt_id: CHEBI:8089 def: "An aromatic amino acid that is alanine in which one of the methyl hydrogens is substituted by a phenyl group." [] -subset: 3_STAR -synonym: "2-amino-3-phenylpropanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "alpha-Amino-beta-phenylpropionic acid" RELATED [KEGG_COMPOUND] -synonym: "DL-Phenylalanine" RELATED [KEGG_COMPOUND] -synonym: "F" RELATED [ChEBI] -synonym: "fenilalanina" RELATED [ChEBI] -synonym: "PHE" RELATED [ChEBI] -synonym: "Phenylalanin" RELATED [ChEBI] +subset: 3:STAR +synonym: "2-amino-3-phenylpropanoic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "2-amino-3-phenylpropanoic acid" RELATED IUPAC:NAME [iupac] +synonym: "alpha-Amino-beta-phenylpropionic acid" RELATED [kegg.compound] +synonym: "DL-Phenylalanine" RELATED [kegg.compound] +synonym: "F" RELATED [chebi] +synonym: "fenilalanina" RELATED [chebi] +synonym: "PHE" RELATED [chebi] +synonym: "Phenylalanin" RELATED [chebi] synonym: "Phenylalanine" EXACT [KEGG_COMPOUND] -synonym: "phenylalanine" EXACT IUPAC_NAME [ChEBI, IUPAC] -xref: CAS:150-30-1 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:50836 {source="Gmelin"} -xref: KEGG:C02057 -xref: PMID:17439666 {source="Europe PMC"} -xref: PMID:22264337 {source="Europe PMC"} -xref: Reaxys:1910407 {source="Reaxys"} -xref: Wikipedia:Phenylalanine +synonym: "Phenylalanine" RELATED [kegg.compound] +synonym: "phenylalanine" EXACT IUPAC:NAME [IUPAC] +synonym: "phenylalanine" RELATED IUPAC:NAME [chebi, iupac] +xref: cas:150-30-1 {source="cas"} +xref: gmelin:50836 {source="gmelin"} +xref: kegg.compound:C02057 {source="kegg.compound"} +xref: pubmed:17439666 {source="pubmed"} +xref: pubmed:22264337 {source="pubmed"} +xref: reaxys:1910407 {source="reaxys"} +xref: wikipedia.en:Phenylalanine {source="wikipedia.en"} is_a: CHEBI:33704 ! alpha-amino acid is_a: CHEBI:33856 ! aromatic amino acid relationship: has_part CHEBI:22744 ! benzyl group -relationship: is_conjugate_acid_of CHEBI:32504 ! phenylalaninate -relationship: is_conjugate_base_of CHEBI:32505 ! phenylalaninium relationship: RO:0000087 CHEBI:83056 ! has role Daphnia magna metabolite +relationship: RO:0018033 CHEBI:32505 ! is deprotonated form of phenylalaninium +relationship: RO:0018034 CHEBI:32504 ! is protonated form of phenylalaninate [Term] id: CHEBI:28057 name: amylopectin alt_id: CHEBI:22538 alt_id: CHEBI:2693 -def: "A polydisperse highly branched polysaccharide derivative composed of chains of D-glucopyranose residues in alpha(1->4) glycosidic linkage. The chains are joined together by alpha(1->6) glycosidic linkages. A small number of alpha(1->3) glycosidic linkages and some 6-phosphate ester groups also may occur. The branches in amylopectin typically contain 24 to 30 glucose residues." [] -subset: 3_STAR -synonym: "Amylopectin" EXACT [KEGG_COMPOUND] -xref: CAS:9037-22-3 {source="ChemIDplus"} -xref: KEGG:C00317 +def: "A polydisperse highly branched polysaccharide derivative composed of chains of D-glucopyranose residues in α(1→4) glycosidic linkage. The chains are joined together by α(1→6) glycosidic linkages. A small number of α(1→3) glycosidic linkages and some 6-phosphate ester groups also may occur. The branches in amylopectin typically contain 24 to 30 glucose residues." [] +subset: 3:STAR +synonym: "Amylopectin" RELATED [kegg.compound] +xref: cas:9037-22-3 {source="cas"} +xref: kegg.compound:C00317 {source="kegg.compound"} is_a: CHEBI:65212 ! polysaccharide derivative [Term] @@ -5550,19 +5778,18 @@ id: CHEBI:28087 name: glycogen alt_id: CHEBI:24379 alt_id: CHEBI:5466 -def: "A polydisperse, highly branched glucan composed of chains of D-glucopyranose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages. A small number of alpha(1->3) glycosidic linkages and some cumulative alpha(1->6) links also may occur. The branches in glycogen typically contain 8 to 12 glucose residues." [] -subset: 3_STAR -synonym: "animal starch" RELATED [ChemIDplus] -synonym: "Glycogen" EXACT [KEGG_COMPOUND] -synonym: "liver starch" RELATED [ChemIDplus] -synonym: "WURCS=2.0/1,4,3/[a2122h-1a_1-5]/1-1-1-1/a4-b1_b4-c1_b6-d1" RELATED [GlyTouCan] -xref: CAS:9005-79-2 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: GlyGen:G99991IU -xref: GlyTouCan:G99991IU -xref: HMDB:HMDB0000757 -xref: KEGG:C00182 -xref: MetaCyc:CPD0-971 -xref: Wikipedia:Glycogen +def: "A polydisperse, highly branched glucan composed of chains of D-glucopyranose residues in α(1→4) glycosidic linkage, joined together by α(1→6) glycosidic linkages. A small number of α(1→3) glycosidic linkages and some cumulative α(1→6) links also may occur. The branches in glycogen typically contain 8 to 12 glucose residues." [] +subset: 3:STAR +synonym: "animal starch" RELATED [chemidplus] +synonym: "Glycogen" RELATED [kegg.compound] +synonym: "liver starch" RELATED [chemidplus] +xref: cas:9005-79-2 {source="cas"} +xref: glygen:G99991IU {source="glygen"} +xref: glytoucan:G99991IU {source="glytoucan"} +xref: hmdb:HMDB0000757 {source="hmdb"} +xref: kegg.compound:C00182 {source="kegg.compound"} +xref: metacyc.compound:CPD0-971 {source="metacyc.compound"} +xref: wikipedia.en:Glycogen {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:24384 ! glycogens relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite @@ -5573,27 +5800,28 @@ id: CHEBI:28102 name: amylose alt_id: CHEBI:22539 alt_id: CHEBI:2694 -def: "A glucan composed of unbranched chains of D-glucopyranose residues in alpha(1->4) glycosidic linkage. The number of repeated glucose subunits (n) is usually in the range of 300 to 3000, but can be many thousands. One of the two components of starch (the other, 70-80%, being amylopectin). Cf. linear maltodextrin, in which the chain length is typically between 3 and 17 glucose units." [] -subset: 3_STAR -synonym: "(1,4-alpha-D-Glucosyl)n" RELATED [KEGG_COMPOUND] -synonym: "(1,4-alpha-D-Glucosyl)n+1" RELATED [KEGG_COMPOUND] -synonym: "(1,4-alpha-D-Glucosyl)n-1" RELATED [KEGG_COMPOUND] -synonym: "(1->4)-alpha-D-glucopyranan" EXACT IUPAC_NAME [IUPAC] -synonym: "1,4-alpha-D-Glucan" RELATED [KEGG_COMPOUND] -synonym: "4-{(1,4)-alpha-D-Glucosyl}(n-1)-D-glucose" RELATED [KEGG_COMPOUND] -synonym: "Amylose" EXACT [KEGG_COMPOUND] -synonym: "Amylose chain" RELATED [KEGG_COMPOUND] -xref: CAS:9005-82-7 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: HMDB:HMDB0003403 -xref: KEGG:C00718 -xref: KEGG:D02329 -xref: KEGG:G10495 -xref: PMID:24162153 {source="Europe PMC"} -xref: PMID:24299760 {source="Europe PMC"} -xref: PMID:24491702 {source="Europe PMC"} -xref: PMID:24505384 {source="Europe PMC"} -xref: Reaxys:8194785 {source="Reaxys"} -xref: Wikipedia:Amylose +def: "A glucan composed of unbranched chains of D-glucopyranose residues in α(1→4) glycosidic linkage. The number of repeated glucose subunits (n) is usually in the range of 300 to 3000, but can be many thousands. One of the two components of starch (the other, 70-80%, being amylopectin). Cf. linear maltodextrin, in which the chain length is typically between 3 and 17 glucose units." [] +subset: 3:STAR +synonym: "(1,4-alpha-D-Glucosyl)n" RELATED [kegg.compound] +synonym: "(1,4-alpha-D-Glucosyl)n+1" RELATED [kegg.compound] +synonym: "(1,4-alpha-D-Glucosyl)n-1" RELATED [kegg.compound] +synonym: "(1->4)-alpha-D-glucopyranan" EXACT IUPAC:NAME [IUPAC] +synonym: "(1->4)-alpha-D-glucopyranan" RELATED IUPAC:NAME [iupac] +synonym: "1,4-alpha-D-Glucan" RELATED [kegg.compound] +synonym: "4-{(1,4)-alpha-D-Glucosyl}(n-1)-D-glucose" RELATED [kegg.compound] +synonym: "Amylose" RELATED [kegg.compound] +synonym: "Amylose chain" RELATED [kegg.compound] +xref: cas:9005-82-7 {source="cas"} +xref: hmdb:HMDB0003403 {source="hmdb"} +xref: kegg.compound:C00718 {source="kegg.compound"} +xref: kegg.drug:D02329 {source="kegg.drug"} +xref: kegg.glycan:G10495 {source="kegg.glycan"} +xref: pubmed:24162153 {source="pubmed"} +xref: pubmed:24299760 {source="pubmed"} +xref: pubmed:24491702 {source="pubmed"} +xref: pubmed:24505384 {source="pubmed"} +xref: reaxys:8194785 {source="reaxys"} +xref: wikipedia.en:Amylose {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:37163 ! glucan relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite @@ -5605,23 +5833,24 @@ id: CHEBI:28425 name: alpha-carotene alt_id: CHEBI:10215 alt_id: CHEBI:22447 -def: "A cyclic carotene with a beta- and an epsilon-ring at opposite ends respectively." [] -subset: 3_STAR -synonym: "all-trans-alpha-carotene" RELATED [ChemIDplus] -synonym: "alpha-Carotene" EXACT [KEGG_COMPOUND] -synonym: "alpha-carotene" EXACT [UniProt] -synonym: "beta,epsilon-carotene" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:2067408 {source="Beilstein"} -xref: Beilstein:3227599 {source="Beilstein"} -xref: CAS:432-70-2 {source="ChemIDplus"} -xref: HMDB:HMDB0003993 -xref: KEGG:C05433 -xref: KNApSAcK:C00003765 -xref: LIPID_MAPS_instance:LMPR01070258 {source="LIPID MAPS"} -xref: PMID:23620017 {source="Europe PMC"} -xref: PMID:24169341 {source="Europe PMC"} -xref: PMID:9408998 {source="Europe PMC"} -xref: Reaxys:2682045 {source="Reaxys"} +def: "A cyclic carotene with a β- and an ε-ring at opposite ends respectively." [] +subset: 3:STAR +synonym: "all-trans-alpha-carotene" RELATED [chemidplus] +synonym: "Alpha-carotene" RELATED [uniprot_ft] +synonym: "alpha-Carotene" RELATED [kegg.compound] +synonym: "beta,epsilon-carotene" EXACT IUPAC:NAME [IUPAC] +synonym: "beta,epsilon-carotene" RELATED IUPAC:NAME [iupac] +xref: beilstein:2067408 {source="beilstein"} +xref: beilstein:3227599 {source="beilstein"} +xref: cas:432-70-2 {source="cas"} +xref: hmdb:HMDB0003993 {source="hmdb"} +xref: kegg.compound:C05433 {source="kegg.compound"} +xref: knapsack:C00003765 {source="knapsack"} +xref: lipidmaps:LMPR01070258 {source="lipidmaps"} +xref: pubmed:23620017 {source="pubmed"} +xref: pubmed:24169341 {source="pubmed"} +xref: pubmed:9408998 {source="pubmed"} +xref: reaxys:2682045 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:139120 ! carotenoid beta-end derivative is_a: CHEBI:35163 ! cyclic carotene @@ -5634,36 +5863,39 @@ name: D-tyrosine alt_id: CHEBI:21111 alt_id: CHEBI:42299 alt_id: CHEBI:4258 -def: "An optically active form of tyrosine having D-configuration." [] -subset: 3_STAR -synonym: "(2R)-2-amino-3-(4-hydroxyphenyl)propanoic acid" RELATED [IUPAC] -synonym: "(R)-2-Amino-3-(p-hydroxyphenyl)propionic acid" RELATED [KEGG_COMPOUND] -synonym: "(R)-3-(p-Hydroxyphenyl)alanine" RELATED [KEGG_COMPOUND] -synonym: "D-Tyr" RELATED [ChEBI] -synonym: "D-Tyrosin" RELATED [ChEBI] +def: "An optically active form of tyrosine having D-configuration." [] +subset: 3:STAR +synonym: "(2R)-2-amino-3-(4-hydroxyphenyl)propanoic acid" RELATED [iupac] +synonym: "(R)-2-Amino-3-(p-hydroxyphenyl)propionic acid" RELATED [kegg.compound] +synonym: "(R)-3-(p-Hydroxyphenyl)alanine" RELATED [kegg.compound] +synonym: "D-Tyr" RELATED [chebi] +synonym: "D-Tyrosin" RELATED [chebi] synonym: "D-TYROSINE" EXACT [PDBeChem] +synonym: "D-TYROSINE" RELATED [pdb-ccd] synonym: "D-Tyrosine" EXACT [KEGG_COMPOUND] -synonym: "D-tyrosine" EXACT IUPAC_NAME [IUPAC] -synonym: "DTY" RELATED [PDBeChem] -xref: CAS:556-02-5 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: DrugBank:DB03839 -xref: ECMDB:ECMDB21520 -xref: Gmelin:603524 {source="Gmelin"} -xref: KEGG:C06420 -xref: MetaCyc:D-TYROSINE -xref: PDBeChem:DTY -xref: PMID:15292242 {source="Europe PMC"} -xref: PMID:23381872 {source="Europe PMC"} -xref: PMID:24936396 {source="Europe PMC"} -xref: Reaxys:2212157 {source="Reaxys"} -xref: YMDB:YMDB00805 +synonym: "D-Tyrosine" RELATED [kegg.compound] +synonym: "D-tyrosine" EXACT IUPAC:NAME [IUPAC] +synonym: "D-tyrosine" RELATED IUPAC:NAME [iupac] +synonym: "DTY" RELATED [pdb-ccd] +xref: cas:556-02-5 {source="cas"} +xref: drugbank:DB03839 {source="drugbank"} +xref: ecmdb:ECMDB21520 {source="ecmdb"} +xref: gmelin:603524 {source="gmelin"} +xref: kegg.compound:C06420 {source="kegg.compound"} +xref: metacyc.compound:D-TYROSINE {source="metacyc.compound"} +xref: pdb-ccd:DTY {source="pdb-ccd"} +xref: pubmed:15292242 {source="pubmed"} +xref: pubmed:23381872 {source="pubmed"} +xref: pubmed:24936396 {source="pubmed"} +xref: reaxys:2212157 {source="reaxys"} +xref: ymdb:YMDB00805 {source="ymdb"} is_a: CHEBI:16733 ! D-alpha-amino acid is_a: CHEBI:18186 ! tyrosine -relationship: is_conjugate_acid_of CHEBI:32773 ! D-tyrosinate(1-) -relationship: is_conjugate_base_of CHEBI:32775 ! D-tyrosinium -relationship: is_enantiomer_of CHEBI:17895 ! L-tyrosine -relationship: is_tautomer_of CHEBI:58570 ! D-tyrosine zwitterion relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018033 CHEBI:32775 ! is deprotonated form of D-tyrosinium +relationship: RO:0018034 CHEBI:32773 ! is protonated form of D-tyrosinate(1-) +relationship: RO:0018036 CHEBI:58570 ! is tautomer of D-tyrosine zwitterion +relationship: RO:0018039 CHEBI:17895 ! is enantiomer of L-tyrosine [Term] id: CHEBI:28616 @@ -5673,45 +5905,50 @@ alt_id: CHEBI:23002 alt_id: CHEBI:3386 alt_id: CHEBI:44573 def: "A one-carbon compound that is ammonia in which one of the hydrogens is replaced by a carboxy group. Although carbamic acid derivatives are common, carbamic acid itself has never been synthesised." [] -subset: 3_STAR -synonym: "Aminoameisensaeure" RELATED [ChEBI] -synonym: "Aminoformic acid" RELATED [KEGG_COMPOUND] -synonym: "Carbamate" RELATED [KEGG_COMPOUND] +subset: 3:STAR +synonym: "Aminoameisensaeure" RELATED [chebi] +synonym: "Aminoformic acid" RELATED [kegg.compound] +synonym: "Carbamate" EXACT [KEGG_COMPOUND] +synonym: "Carbamate" RELATED [kegg.compound] synonym: "CARBAMIC ACID" EXACT [PDBeChem] +synonym: "CARBAMIC ACID" RELATED [pdb-ccd] synonym: "Carbamic acid" EXACT [KEGG_COMPOUND] -synonym: "carbamic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "Carbamidsaeure" RELATED [ChEBI] -xref: Beilstein:1734754 {source="Beilstein"} -xref: CAS:463-77-4 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: DrugBank:DB04261 -xref: Gmelin:130345 {source="Gmelin"} -xref: KEGG:C01563 -xref: PDBeChem:OUT -xref: Wikipedia:Carbamic_acid +synonym: "Carbamic acid" RELATED [kegg.compound] +synonym: "carbamic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "carbamic acid" RELATED IUPAC:NAME [iupac] +synonym: "Carbamidsaeure" RELATED [chebi] +xref: beilstein:1734754 {source="beilstein"} +xref: cas:463-77-4 {source="cas"} +xref: drugbank:DB04261 {source="drugbank"} +xref: gmelin:130345 {source="gmelin"} +xref: kegg.compound:C01563 {source="kegg.compound"} +xref: pdb-ccd:OUT {source="pdb-ccd"} +xref: wikipedia.en:Carbamic_acid {source="wikipedia.en"} is_a: CHEBI:35352 ! organonitrogen compound is_a: CHEBI:35605 ! carbon oxoacid is_a: CHEBI:64708 ! one-carbon compound -relationship: is_conjugate_acid_of CHEBI:13941 ! carbamate relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:13941 ! is protonated form of carbamate [Term] id: CHEBI:28659 name: phosphorus atom alt_id: CHEBI:26080 alt_id: CHEBI:8168 -subset: 3_STAR -synonym: "15P" RELATED [IUPAC] -synonym: "fosforo" RELATED [ChEBI] -synonym: "P" RELATED [IUPAC, KEGG_COMPOUND] -synonym: "Phosphor" RELATED [ChEBI] -synonym: "phosphore" RELATED [ChEBI] -synonym: "Phosphorus" RELATED [KEGG_COMPOUND] -synonym: "phosphorus" EXACT IUPAC_NAME [IUPAC] -synonym: "phosphorus" RELATED [ChEBI] -xref: CAS:7723-14-0 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Gmelin:16235 {source="Gmelin"} -xref: KEGG:C06262 -xref: WebElements:P +subset: 3:STAR +synonym: "15P" RELATED [iupac] +synonym: "fosforo" RELATED [chebi] +synonym: "P" RELATED [iupac, kegg.compound] +synonym: "Phosphor" RELATED [chebi] +synonym: "phosphore" RELATED [chebi] +synonym: "Phosphorus" EXACT [KEGG_COMPOUND] +synonym: "Phosphorus" RELATED [kegg.compound] +synonym: "phosphorus" EXACT IUPAC:NAME [IUPAC] +synonym: "phosphorus" RELATED IUPAC:NAME [chebi, iupac] +xref: cas:7723-14-0 {source="cas"} +xref: gmelin:16235 {source="gmelin"} +xref: kegg.compound:C06262 {source="kegg.compound"} +xref: webelements:P {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25585 ! nonmetal atom is_a: CHEBI:33300 ! pnictogen @@ -5724,52 +5961,54 @@ alt_id: CHEBI:1420 alt_id: CHEBI:26652 alt_id: CHEBI:49894 def: "A primary amino compound that is the 5-hydroxy derivative of tryptamine." [] -subset: 3_STAR -synonym: "3-(2-Aminoethyl)-1H-indol-5-ol" RELATED [KEGG_COMPOUND] -synonym: "3-(2-aminoethyl)-1H-indol-5-ol" EXACT IUPAC_NAME [IUPAC] -synonym: "5-HT" RELATED [IUPHAR] -synonym: "5-Hydroxytryptamine" RELATED [KEGG_COMPOUND] -synonym: "Enteramine" RELATED [KEGG_COMPOUND] -synonym: "SEROTONIN" EXACT [PDBeChem] -synonym: "Serotonin" EXACT [KEGG_COMPOUND] -synonym: "serotonine" RELATED [ChEBI] -synonym: "thrombocytin" RELATED [ChemIDplus] -synonym: "thrombotonin" RELATED [ChemIDplus] -xref: CAS:50-67-9 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Gmelin:1861995 {source="Gmelin"} -xref: HMDB:HMDB0000259 -xref: KEGG:C00780 -xref: KNApSAcK:C00001429 -xref: LINCS:LSM-6589 -xref: MetaCyc:SEROTONIN -xref: PDBeChem:SRO -xref: PMID:18593914 {source="Europe PMC"} -xref: PMID:22770225 {source="Europe PMC"} -xref: PMID:24136337 {source="Europe PMC"} -xref: Reaxys:143524 {source="Reaxys"} -xref: Wikipedia:Serotonin +subset: 3:STAR +synonym: "3-(2-Aminoethyl)-1H-indol-5-ol" EXACT [KEGG_COMPOUND] +synonym: "3-(2-Aminoethyl)-1H-indol-5-ol" RELATED [kegg.compound] +synonym: "3-(2-aminoethyl)-1H-indol-5-ol" EXACT IUPAC:NAME [IUPAC] +synonym: "3-(2-aminoethyl)-1H-indol-5-ol" RELATED IUPAC:NAME [iupac] +synonym: "5-HT" RELATED [iuphar] +synonym: "5-Hydroxytryptamine" RELATED [kegg.compound] +synonym: "Enteramine" RELATED [kegg.compound] +synonym: "SEROTONIN" RELATED [pdb-ccd] +synonym: "Serotonin" RELATED [kegg.compound] +synonym: "serotonine" RELATED [chebi] +synonym: "thrombocytin" RELATED [chemidplus] +synonym: "thrombotonin" RELATED [chemidplus] +xref: cas:50-67-9 {source="cas"} +xref: gmelin:1861995 {source="gmelin"} +xref: hmdb:HMDB0000259 {source="hmdb"} +xref: kegg.compound:C00780 {source="kegg.compound"} +xref: knapsack:C00001429 {source="knapsack"} +xref: lincs.smallmolecule:LSM-6589 {source="lincs.smallmolecule"} +xref: metacyc.compound:SEROTONIN {source="metacyc.compound"} +xref: pdb-ccd:SRO {source="pdb-ccd"} +xref: pubmed:18593914 {source="pubmed"} +xref: pubmed:22770225 {source="pubmed"} +xref: pubmed:24136337 {source="pubmed"} +xref: reaxys:143524 {source="reaxys"} +xref: wikipedia.en:Serotonin {source="wikipedia.en"} is_a: CHEBI:25375 ! monoamine molecular messenger is_a: CHEBI:27162 ! tryptamines is_a: CHEBI:33853 ! phenols is_a: CHEBI:50994 ! primary amino compound is_a: CHEBI:84729 ! hydroxyindoles -relationship: has_functional_parent CHEBI:16765 ! tryptamine -relationship: is_conjugate_base_of CHEBI:350546 ! serotonin(1+) relationship: RO:0000087 CHEBI:25512 ! has role neurotransmitter relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:350546 ! is deprotonated form of serotonin(1+) +relationship: RO:0018038 CHEBI:16765 ! has functional parent tryptamine [Term] id: CHEBI:28793 name: beta-D-glucan alt_id: CHEBI:10394 alt_id: CHEBI:22793 -subset: 3_STAR -synonym: "beta-D-Glucan" EXACT [KEGG_COMPOUND] -synonym: "beta-D-glucans" RELATED [ChEBI] -synonym: "beta-Glucan" RELATED [KEGG_COMPOUND] -xref: CAS:9041-22-9 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: KEGG:C00551 +subset: 3:STAR +synonym: "beta-D-Glucan" RELATED [kegg.compound] +synonym: "beta-D-glucans" RELATED [chebi] +synonym: "beta-Glucan" RELATED [kegg.compound] +xref: cas:9041-22-9 {source="cas"} +xref: kegg.compound:C00551 {source="kegg.compound"} is_a: CHEBI:37163 ! glucan [Term] @@ -5778,34 +6017,35 @@ name: lutein alt_id: CHEBI:27324 alt_id: CHEBI:43817 alt_id: CHEBI:6576 -subset: 3_STAR -synonym: "(3R,3'R,6'R)-beta,epsilon-carotene-3,3'-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL" RELATED [PDBeChem] -synonym: "Bo-Xan" RELATED [ChemIDplus] -synonym: "E 161b" RELATED [ChEBI] -synonym: "Lutein" EXACT [KEGG_COMPOUND] -synonym: "lutein" EXACT [UniProt] -synonym: "Xanthophyll" RELATED [KEGG_COMPOUND] -xref: CAS:127-40-2 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:4145 {source="DrugCentral"} -xref: DrugBank:DB00137 -xref: HMDB:HMDB0003233 -xref: KEGG:C08601 -xref: KNApSAcK:C00003776 -xref: LIPID_MAPS_instance:LMPR01070274 {source="LIPID MAPS"} -xref: MetaCyc:CPD1F-119 -xref: PDBeChem:LUT -xref: PMID:10714278 {source="Europe PMC"} -xref: PMID:14670087 {source="Europe PMC"} -xref: PMID:23543147 {source="Europe PMC"} -xref: PMID:24451312 {source="Europe PMC"} -xref: Reaxys:2068550 {source="Reaxys"} -xref: Wikipedia:Lutein +subset: 3:STAR +synonym: "(3R,3'R,6'R)-beta,epsilon-carotene-3,3'-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "(3R,3'R,6'R)-beta,epsilon-carotene-3,3'-diol" RELATED IUPAC:NAME [iupac] +synonym: "(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL" RELATED [pdb-ccd] +synonym: "Bo-Xan" RELATED [chemidplus] +synonym: "E 161b" RELATED [chebi] +synonym: "Lutein" RELATED [kegg.compound] +synonym: "lutein" RELATED [uniprot_ft] +synonym: "Xanthophyll" RELATED [kegg.compound] +xref: cas:127-40-2 {source="cas"} +xref: drugbank:DB00137 {source="drugbank"} +xref: drugcentral:4145 {source="drugcentral"} +xref: hmdb:HMDB0003233 {source="hmdb"} +xref: kegg.compound:C08601 {source="kegg.compound"} +xref: knapsack:C00003776 {source="knapsack"} +xref: lipidmaps:LMPR01070274 {source="lipidmaps"} +xref: metacyc.compound:CPD1F-119 {source="metacyc.compound"} +xref: pdb-ccd:LUT {source="pdb-ccd"} +xref: pubmed:10714278 {source="pubmed"} +xref: pubmed:14670087 {source="pubmed"} +xref: pubmed:23543147 {source="pubmed"} +xref: pubmed:24451312 {source="pubmed"} +xref: reaxys:2068550 {source="reaxys"} +xref: wikipedia.en:Lutein {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:23045 ! carotenol -relationship: has_parent_hydride CHEBI:35147 ! (6'R)-beta,epsilon-carotene relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:77182 ! has role food colouring +relationship: RO:0018040 CHEBI:35147 ! has parent hydride (6'R)-beta,epsilon-carotene [Term] id: CHEBI:28868 @@ -5814,81 +6054,80 @@ alt_id: CHEBI:13634 alt_id: CHEBI:24022 alt_id: CHEBI:4985 def: "The conjugate base of a fatty acid, arising from deprotonation of the carboxylic acid group of the corresponding fatty acid." [] -subset: 3_STAR -synonym: "a fatty acid" RELATED [UniProt] -synonym: "acido graso anionico" RELATED [ChEBI] -synonym: "acidos grasos anionicos" RELATED [ChEBI] -synonym: "Alkanate" RELATED [KEGG_COMPOUND] -synonym: "anion de l'acide gras" RELATED [ChEBI] -synonym: "Fatty acid anion" EXACT [KEGG_COMPOUND] -synonym: "fatty acid anions" RELATED [ChEBI] -synonym: "Fettsaeureanion" RELATED [ChEBI] -synonym: "Fettsaeureanionen" RELATED [ChEBI] -xref: KEGG:C02403 -xref: PMID:18628202 {source="Europe PMC"} +subset: 3:STAR +synonym: "a fatty acid" RELATED [uniprot_ft] +synonym: "acido graso anionico" RELATED [chebi] +synonym: "acidos grasos anionicos" RELATED [chebi] +synonym: "Alkanate" RELATED [kegg.compound] +synonym: "anion de l'acide gras" RELATED [chebi] +synonym: "Fatty acid anion" RELATED [kegg.compound] +synonym: "fatty acid anions" RELATED [chebi] +synonym: "Fettsaeureanion" RELATED [chebi] +synonym: "Fettsaeureanionen" RELATED [chebi] +xref: kegg.compound:C02403 {source="kegg.compound"} +xref: pubmed:18628202 {source="pubmed"} is_a: CHEBI:18059 ! lipid is_a: CHEBI:35757 ! monocarboxylic acid anion -relationship: is_conjugate_base_of CHEBI:35366 ! fatty acid +relationship: RO:0018033 CHEBI:35366 ! is deprotonated form of fatty acid [Term] id: CHEBI:28918 name: (R)-adrenaline alt_id: CHEBI:1942 alt_id: CHEBI:23928 -def: "The R-enantiomer of adrenaline. It is a hormone secreted by the adrenal glands resulting in the 'fight-or-flight' response." [] -subset: 3_STAR -synonym: "(-)-(R)-epinephrine" RELATED [ChemIDplus] -synonym: "(-)-3,4-dihydroxy-alpha-((methylamino)methyl)benzyl alcohol" RELATED [NIST_Chemistry_WebBook] -synonym: "(-)-adrenaline" RELATED [IUPHAR] -synonym: "(R)-(-)-Adnephrine" RELATED [KEGG_COMPOUND] -synonym: "(R)-(-)-Adrenaline" RELATED [KEGG_COMPOUND] -synonym: "(R)-(-)-adrenaline" RELATED [ChEBI] -synonym: "(R)-(-)-Epinephrine" RELATED [KEGG_COMPOUND] -synonym: "(R)-(-)-Epirenamine" RELATED [KEGG_COMPOUND] -synonym: "4-[(1R)-1-Hydroxy-2-(methylamino)ethyl]-1,2-benzenediol" RELATED [KEGG_COMPOUND] -synonym: "4-[(1R)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "Adrenalin" RELATED BRAND_NAME [KEGG_DRUG, NIST_Chemistry_WebBook] -synonym: "adrenaline" RELATED [ChEBI, NIST_Chemistry_WebBook] -synonym: "epinefrina" RELATED INN [ChemIDplus] -synonym: "Epinephrin" RELATED [ChEBI] -synonym: "epinephrine" RELATED INN [ChEBI, ChemIDplus] -synonym: "epinephrinum" RELATED INN [ChemIDplus] -synonym: "Epipen" RELATED BRAND_NAME [DrugBank, KEGG_DRUG] -synonym: "Epipen JR" RELATED BRAND_NAME [DrugBank] -synonym: "L-Adrenaline" RELATED [KEGG_COMPOUND] -synonym: "levoepinephrine" RELATED [IUPHAR] -synonym: "Primatene" RELATED BRAND_NAME [DrugBank] -xref: CAS:51-43-4 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Drug_Central:1028 {source="DrugCentral"} -xref: DrugBank:DB00668 -xref: HMDB:HMDB0000068 -xref: KEGG:C00788 -xref: KEGG:D00095 -xref: KNApSAcK:C00029643 -xref: MetaCyc:L-EPINEPHRINE -xref: PMID:18325983 {source="Europe PMC"} -xref: PMID:21963816 {source="Europe PMC"} -xref: PMID:22115931 {source="Europe PMC"} -xref: PMID:22405854 {source="Europe PMC"} -xref: PMID:22425731 {source="Europe PMC"} -xref: PMID:22429969 {source="Europe PMC"} -xref: PMID:22569014 {source="Europe PMC"} -xref: PMID:22623754 {source="Europe PMC"} -xref: PMID:22826982 {source="Europe PMC"} -xref: PMID:22895980 {source="Europe PMC"} -xref: PMID:22898765 {source="Europe PMC"} -xref: PMID:22905594 {source="Europe PMC"} -xref: PMID:22940899 {source="Europe PMC"} -xref: PMID:23066296 {source="Europe PMC"} -xref: PMID:23130169 {source="Europe PMC"} -xref: PMID:23164182 {source="Europe PMC"} -xref: PMID:23185846 {source="Europe PMC"} -xref: PMID:29438107 {source="Europe PMC"} -xref: Reaxys:2368277 {source="Reaxys"} -xref: Wikipedia:Epinephrine +def: "The R-enantiomer of adrenaline. It is a hormone secreted by the adrenal glands resulting in the 'fight-or-flight' response." [] +subset: 3:STAR +synonym: "(-)-(R)-epinephrine" RELATED [chemidplus] +synonym: "(-)-3,4-dihydroxy-alpha-((methylamino)methyl)benzyl alcohol" RELATED [nist] +synonym: "(-)-adrenaline" RELATED [iuphar] +synonym: "(R)-(-)-Adnephrine" RELATED [kegg.compound] +synonym: "(R)-(-)-Adrenaline" RELATED [kegg.compound] +synonym: "(R)-(-)-adrenaline" RELATED [chebi] +synonym: "(R)-(-)-Epinephrine" RELATED [kegg.compound] +synonym: "(R)-(-)-Epirenamine" RELATED [kegg.compound] +synonym: "4-[(1R)-1-Hydroxy-2-(methylamino)ethyl]-1,2-benzenediol" RELATED [kegg.compound] +synonym: "4-[(1R)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-[(1R)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" RELATED IUPAC:NAME [iupac] +synonym: "Adrenalin" RELATED BRAND:NAME [kegg.drug, nist] +synonym: "adrenaline" RELATED [chebi, nist] +synonym: "epinefrina" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Epinephrin" RELATED [chebi] +synonym: "epinephrine" RELATED http://purl.obolibrary.org/obo/chebi/INN [chebi, chemidplus] +synonym: "epinephrinum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Epipen" RELATED BRAND:NAME [drugbank, kegg.drug] +synonym: "Epipen JR" RELATED BRAND:NAME [drugbank] +synonym: "L-Adrenaline" RELATED [kegg.compound] +synonym: "levoepinephrine" RELATED [iuphar] +synonym: "Primatene" RELATED BRAND:NAME [drugbank] +xref: cas:51-43-4 {source="cas"} +xref: drugbank:DB00668 {source="drugbank"} +xref: drugcentral:1028 {source="drugcentral"} +xref: hmdb:HMDB0000068 {source="hmdb"} +xref: kegg.compound:C00788 {source="kegg.compound"} +xref: kegg.drug:D00095 {source="kegg.drug"} +xref: knapsack:C00029643 {source="knapsack"} +xref: metacyc.compound:L-EPINEPHRINE {source="metacyc.compound"} +xref: pubmed:18325983 {source="pubmed"} +xref: pubmed:21963816 {source="pubmed"} +xref: pubmed:22115931 {source="pubmed"} +xref: pubmed:22405854 {source="pubmed"} +xref: pubmed:22425731 {source="pubmed"} +xref: pubmed:22429969 {source="pubmed"} +xref: pubmed:22569014 {source="pubmed"} +xref: pubmed:22623754 {source="pubmed"} +xref: pubmed:22826982 {source="pubmed"} +xref: pubmed:22895980 {source="pubmed"} +xref: pubmed:22898765 {source="pubmed"} +xref: pubmed:22905594 {source="pubmed"} +xref: pubmed:22940899 {source="pubmed"} +xref: pubmed:23066296 {source="pubmed"} +xref: pubmed:23130169 {source="pubmed"} +xref: pubmed:23164182 {source="pubmed"} +xref: pubmed:23185846 {source="pubmed"} +xref: pubmed:29438107 {source="pubmed"} +xref: reaxys:2368277 {source="reaxys"} +xref: wikipedia.en:Epinephrine {source="wikipedia.en"} is_a: CHEBI:194548 ! 4-[1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol -relationship: is_conjugate_base_of CHEBI:71406 ! (R)-adrenaline(1+) -relationship: is_enantiomer_of CHEBI:40751 ! (S)-adrenaline relationship: RO:0000087 CHEBI:24621 ! has role hormone relationship: RO:0000087 CHEBI:35522 ! has role beta-adrenergic agonist relationship: RO:0000087 CHEBI:35523 ! has role bronchodilator agent @@ -5899,6 +6138,8 @@ relationship: RO:0000087 CHEBI:37886 ! has role adrenergic agonist relationship: RO:0000087 CHEBI:50513 ! has role mydriatic agent relationship: RO:0000087 CHEBI:50514 ! has role vasoconstrictor agent relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018033 CHEBI:71406 ! is deprotonated form of (R)-adrenaline(1+) +relationship: RO:0018039 CHEBI:40751 ! is enantiomer of (S)-adrenaline [Term] id: CHEBI:28938 @@ -5907,50 +6148,53 @@ alt_id: CHEBI:22534 alt_id: CHEBI:49783 alt_id: CHEBI:7435 def: "An onium cation obtained by protonation of ammonia." [] -subset: 3_STAR -synonym: "[NH4](+)" RELATED [MolBase] -synonym: "ammonium" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "ammonium cation" RELATED [ChemIDplus] -synonym: "ammonium ion" RELATED [PDBeChem] -synonym: "Ammonium(1+)" RELATED [ChemIDplus] -synonym: "azanium" EXACT IUPAC_NAME [IUPAC] -synonym: "NH4(+)" RELATED [IUPAC, UniProt] -synonym: "NH4+" RELATED [KEGG_COMPOUND] -xref: CAS:14798-03-9 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:84 {source="Gmelin"} -xref: KEGG:C01342 -xref: MetaCyc:AMMONIUM -xref: MolBase:929 -xref: PDBeChem:NH4 -xref: PMID:11319011 {source="Europe PMC"} -xref: PMID:11341317 {source="Europe PMC"} -xref: PMID:12096804 {source="Europe PMC"} -xref: PMID:14512268 {source="Europe PMC"} -xref: PMID:14879753 {source="Europe PMC"} -xref: PMID:16345391 {source="Europe PMC"} -xref: PMID:16903292 {source="Europe PMC"} -xref: PMID:17392693 {source="Europe PMC"} -xref: PMID:18515490 {source="Europe PMC"} -xref: PMID:19199063 {source="Europe PMC"} -xref: PMID:19596600 {source="Europe PMC"} -xref: PMID:19682559 {source="Europe PMC"} -xref: PMID:19716251 {source="Europe PMC"} -xref: PMID:21993530 {source="Europe PMC"} -xref: PMID:22265469 {source="Europe PMC"} -xref: PMID:22524020 {source="Europe PMC"} -xref: PMID:22562341 {source="Europe PMC"} -xref: PMID:22631217 {source="Europe PMC"} -xref: Reaxys:16093784 {source="Reaxys"} -xref: Wikipedia:Ammonium +subset: 3:STAR +synonym: "[NH4](+)" RELATED [molbase] +synonym: "ammonium" EXACT IUPAC:NAME [ChEBI, IUPAC] +synonym: "ammonium" RELATED IUPAC:NAME [chebi, iupac] +synonym: "ammonium cation" RELATED [chemidplus] +synonym: "ammonium ion" RELATED [pdb-ccd] +synonym: "Ammonium(1+)" RELATED [chemidplus] +synonym: "azanium" EXACT IUPAC:NAME [IUPAC] +synonym: "azanium" RELATED IUPAC:NAME [iupac] +synonym: "NH(4)(+)" RELATED [uniprot_ft] +synonym: "NH4(+)" RELATED [iupac] +synonym: "NH4+" RELATED [kegg.compound] +xref: cas:14798-03-9 {source="cas"} +xref: gmelin:84 {source="gmelin"} +xref: kegg.compound:C01342 {source="kegg.compound"} +xref: metacyc.compound:AMMONIUM {source="metacyc.compound"} +xref: molbase:929 {source="molbase"} +xref: pdb-ccd:NH4 {source="pdb-ccd"} +xref: pubmed:11319011 {source="pubmed"} +xref: pubmed:11341317 {source="pubmed"} +xref: pubmed:12096804 {source="pubmed"} +xref: pubmed:14512268 {source="pubmed"} +xref: pubmed:14879753 {source="pubmed"} +xref: pubmed:16345391 {source="pubmed"} +xref: pubmed:16903292 {source="pubmed"} +xref: pubmed:17392693 {source="pubmed"} +xref: pubmed:18515490 {source="pubmed"} +xref: pubmed:19199063 {source="pubmed"} +xref: pubmed:19596600 {source="pubmed"} +xref: pubmed:19682559 {source="pubmed"} +xref: pubmed:19716251 {source="pubmed"} +xref: pubmed:21993530 {source="pubmed"} +xref: pubmed:22265469 {source="pubmed"} +xref: pubmed:22524020 {source="pubmed"} +xref: pubmed:22562341 {source="pubmed"} +xref: pubmed:22631217 {source="pubmed"} +xref: reaxys:16093784 {source="reaxys"} +xref: wikipedia.en:Ammonium {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35106 ! nitrogen hydride is_a: CHEBI:50313 ! onium cation is_a: CHEBI:60242 ! monovalent inorganic cation -relationship: is_conjugate_acid_of CHEBI:16134 ! ammonia relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:16134 ! is protonated form of ammonia [Term] id: CHEBI:28963 @@ -5959,13 +6203,13 @@ alt_id: CHEBI:22481 alt_id: CHEBI:22530 alt_id: CHEBI:2662 def: "Any sugar having one or more alcoholic hydroxy groups replaced by substituted or unsubstituted amino groups." [] -subset: 3_STAR -synonym: "amino sugars" RELATED [ChEBI] -synonym: "aminosugar" RELATED [ChEBI] -synonym: "Aminosugars" RELATED [KEGG_COMPOUND] -xref: KEGG:C05383 -xref: PMID:18424273 {source="Europe PMC"} -xref: PMID:9056391 {source="Europe PMC"} +subset: 3:STAR +synonym: "amino sugars" RELATED [chebi] +synonym: "aminosugar" RELATED [chebi] +synonym: "Aminosugars" RELATED [kegg.compound] +xref: kegg.compound:C05383 {source="kegg.compound"} +xref: pubmed:18424273 {source="pubmed"} +xref: pubmed:9056391 {source="pubmed"} is_a: CHEBI:63299 ! carbohydrate derivative [Term] @@ -5976,12 +6220,12 @@ alt_id: CHEBI:23688 alt_id: CHEBI:23689 alt_id: CHEBI:38711 def: "A carboxylic acid dianion obtained by deprotonation of both carboxy groups of any dicarboxylic acid." [] -subset: 3_STAR -synonym: "a dicarboxylate" RELATED [UniProt] -synonym: "dicarboxylate" RELATED [ChEBI] -synonym: "dicarboxylates" RELATED [ChEBI] -synonym: "dicarboxylic acid dianion" EXACT [ChEBI] -synonym: "dicarboxylic acid dianions" RELATED [ChEBI] +subset: 3:STAR +synonym: "a dicarboxylate" RELATED [uniprot_ft] +synonym: "dicarboxylate" RELATED [chebi] +synonym: "dicarboxylates" RELATED [chebi] +synonym: "dicarboxylic acid dianion" RELATED [chebi] +synonym: "dicarboxylic acid dianions" RELATED [chebi] is_a: CHEBI:35693 ! dicarboxylic acid anion is_a: CHEBI:38716 ! carboxylic acid dianion @@ -5992,29 +6236,68 @@ alt_id: CHEBI:13351 alt_id: CHEBI:23017 alt_id: CHEBI:23744 alt_id: CHEBI:3401 -subset: 3_STAR -synonym: "[CO(OH)2]" RELATED [IUPAC] +subset: 3:STAR +synonym: "[CO(OH)2]" RELATED [iupac] synonym: "Carbonic acid" EXACT [KEGG_COMPOUND] -synonym: "carbonic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "Dihydrogen carbonate" RELATED [KEGG_COMPOUND] -synonym: "dihydroxidooxidocarbon" EXACT IUPAC_NAME [IUPAC] -synonym: "H2CO3" RELATED [IUPAC, KEGG_COMPOUND] -synonym: "Koehlensaeure" RELATED [ChEBI] -xref: CAS:463-79-6 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Gmelin:25554 {source="Gmelin"} -xref: KEGG:C01353 -xref: PDBeChem:CO3 +synonym: "Carbonic acid" RELATED [kegg.compound] +synonym: "carbonic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "carbonic acid" RELATED IUPAC:NAME [iupac] +synonym: "Dihydrogen carbonate" RELATED [kegg.compound] +synonym: "dihydroxidooxidocarbon" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydroxidooxidocarbon" RELATED IUPAC:NAME [iupac] +synonym: "H2CO3" RELATED [iupac, kegg.compound] +synonym: "Koehlensaeure" RELATED [chebi] +xref: cas:463-79-6 {source="cas"} +xref: gmelin:25554 {source="gmelin"} +xref: kegg.compound:C01353 {source="kegg.compound"} +xref: pdb-ccd:CO3 {source="pdb-ccd"} is_a: CHEBI:35605 ! carbon oxoacid is_a: CHEBI:36961 ! chalcocarbonic acid -relationship: is_conjugate_acid_of CHEBI:17544 ! hydrogencarbonate relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite +relationship: RO:0018034 CHEBI:17544 ! is protonated form of hydrogencarbonate [Term] id: CHEBI:29057 name: keratan alt_id: CHEBI:14490 alt_id: CHEBI:24954 -subset: 1_STAR +alt_id: CHEBI:89571 +subset: 1:STAR +synonym: "keratan" RELATED [chebi] +synonym: "Keratan 6'-sulfate" RELATED [hmdb] +synonym: "Keratan 6'-sulphate" RELATED [hmdb] +synonym: "Keratan sulfate" RELATED [hmdb] +synonym: "Keratan sulphate" RELATED [hmdb] +synonym: "Kerato 6'-sulfate" RELATED [hmdb] +synonym: "Kerato 6'-sulphate" RELATED [hmdb] +synonym: "Kerato sulfate" RELATED [hmdb] +synonym: "Kerato sulphate" RELATED [hmdb] +synonym: "{[(2S,4S,5R,6S)-5-acetamido-6-{[(2S,3R,4S,5S,6R)-2-{[(2R,3S,4R,5R,6S)-5-acetamido-4-hydroxy-2-[(sulfooxy)methyl]-6-{[(2R,3R,4S,5S,6R)-2,3,5-trihydroxy-6-[(sulfooxy)methyl]oxan-4-yl]oxy}oxan-3-yl]oxy}-3,5-dihydroxy-6-[(sulfooxy)methyl]oxan-4-yl]oxy}-4-hydroxyoxan-2-yl]methoxy}sulfonic acid" RELATED [hmdb] +xref: cas:69992-87-6 {source="cas"} +xref: hmdb:HMDB0001165 {source="hmdb"} +xref: kegg.compound:C01431 {source="kegg.compound"} +xref: metacyc.compound:KERATAN {source="metacyc.compound"} +xref: pubmed:11514545 {source="pubmed"} +xref: pubmed:14711889 {source="pubmed"} +xref: pubmed:15042600 {source="pubmed"} +xref: pubmed:15082343 {source="pubmed"} +xref: pubmed:1633632 {source="pubmed"} +xref: pubmed:1710640 {source="pubmed"} +xref: pubmed:1718441 {source="pubmed"} +xref: pubmed:2056369 {source="pubmed"} +xref: pubmed:2100374 {source="pubmed"} +xref: pubmed:2521451 {source="pubmed"} +xref: pubmed:2562661 {source="pubmed"} +xref: pubmed:2935158 {source="pubmed"} +xref: pubmed:2951638 {source="pubmed"} +xref: pubmed:2952259 {source="pubmed"} +xref: pubmed:2957502 {source="pubmed"} +xref: pubmed:6242453 {source="pubmed"} +xref: pubmed:9054908 {source="pubmed"} +xref: pubmed:9208186 {source="pubmed"} +xref: pubmed:9313390 {source="pubmed"} +xref: pubmed:9397261 {source="pubmed"} +xref: wikipedia.en:keratan_sulfate {source="wikipedia.en"} is_a: CHEBI:18085 ! glycosaminoglycan [Term] @@ -6025,13 +6308,13 @@ alt_id: CHEBI:13945 alt_id: CHEBI:23026 alt_id: CHEBI:58657 def: "The conjugate base formed when the carboxy group of a carboxylic acid is deprotonated." [] -subset: 3_STAR -synonym: "a carboxylate" RELATED [UniProt] -synonym: "carboxylic acid anions" RELATED [ChEBI] -synonym: "carboxylic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "a carboxylate" RELATED [uniprot_ft] +synonym: "carboxylic acid anions" RELATED [chebi] +synonym: "carboxylic anions" RELATED [chebi] is_a: CHEBI:25696 ! organic anion is_a: CHEBI:35406 ! oxoanion -relationship: is_conjugate_base_of CHEBI:33575 ! carboxylic acid +relationship: RO:0018033 CHEBI:33575 ! is deprotonated form of carboxylic acid [Term] id: CHEBI:29075 @@ -6039,10 +6322,10 @@ name: mononucleotide alt_id: CHEBI:14616 alt_id: CHEBI:25404 alt_id: CHEBI:6983 -subset: 3_STAR -synonym: "Mononucleotide" EXACT [KEGG_COMPOUND] -synonym: "mononucleotides" RELATED [ChEBI] -xref: KEGG:C02171 +subset: 3:STAR +synonym: "Mononucleotide" RELATED [kegg.compound] +synonym: "mononucleotides" RELATED [chebi] +xref: kegg.compound:C02171 {source="kegg.compound"} is_a: CHEBI:36976 ! nucleotide [Term] @@ -6052,18 +6335,22 @@ alt_id: CHEBI:26717 alt_id: CHEBI:49766 alt_id: CHEBI:9175 def: "A monoatomic monocation obtained from sodium." [] -subset: 3_STAR -synonym: "Na(+)" RELATED [IUPAC, UniProt] -synonym: "Na+" RELATED [KEGG_COMPOUND] -synonym: "sodium cation" EXACT IUPAC_NAME [IUPAC] -synonym: "SODIUM ION" RELATED [PDBeChem] -synonym: "sodium(1+)" EXACT IUPAC_NAME [IUPAC] -synonym: "sodium(1+) ion" EXACT IUPAC_NAME [IUPAC] -synonym: "sodium(I) cation" EXACT IUPAC_NAME [IUPAC] -xref: CAS:17341-25-2 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:15196 {source="Gmelin"} -xref: KEGG:C01330 -xref: PDBeChem:NA +subset: 3:STAR +synonym: "Na(+)" RELATED [iupac, uniprot_ft] +synonym: "Na+" RELATED [kegg.compound] +synonym: "sodium cation" EXACT IUPAC:NAME [IUPAC] +synonym: "sodium cation" RELATED IUPAC:NAME [iupac] +synonym: "SODIUM ION" RELATED [pdb-ccd] +synonym: "sodium(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "sodium(1+)" RELATED IUPAC:NAME [iupac] +synonym: "sodium(1+) ion" EXACT IUPAC:NAME [IUPAC] +synonym: "sodium(1+) ion" RELATED IUPAC:NAME [iupac] +synonym: "sodium(I) cation" EXACT IUPAC:NAME [IUPAC] +synonym: "sodium(I) cation" RELATED IUPAC:NAME [iupac] +xref: cas:17341-25-2 {source="cas"} +xref: gmelin:15196 {source="gmelin"} +xref: kegg.compound:C01330 {source="kegg.compound"} +xref: pdb-ccd:NA {source="pdb-ccd"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25414 ! monoatomic monocation is_a: CHEBI:33504 ! alkali metal cation @@ -6079,19 +6366,23 @@ alt_id: CHEBI:26219 alt_id: CHEBI:49685 alt_id: CHEBI:8345 def: "A monoatomic monocation obtained from potassium." [] -subset: 3_STAR -synonym: "K(+)" RELATED [IUPAC, UniProt] -synonym: "K+" RELATED [KEGG_COMPOUND] -synonym: "potassium cation" EXACT IUPAC_NAME [IUPAC] -synonym: "POTASSIUM ION" RELATED [PDBeChem] -synonym: "potassium(1+)" EXACT IUPAC_NAME [IUPAC] -synonym: "potassium(1+) ion" EXACT IUPAC_NAME [IUPAC] -synonym: "potassium(I) cation" EXACT IUPAC_NAME [IUPAC] -xref: CAS:24203-36-9 {source="NIST Chemistry WebBook"} -xref: Gmelin:15203 {source="Gmelin"} -xref: KEGG:C00238 -xref: KEGG:D08403 -xref: PDBeChem:K +subset: 3:STAR +synonym: "K(+)" RELATED [iupac, uniprot_ft] +synonym: "K+" RELATED [kegg.compound] +synonym: "potassium cation" EXACT IUPAC:NAME [IUPAC] +synonym: "potassium cation" RELATED IUPAC:NAME [iupac] +synonym: "POTASSIUM ION" RELATED [pdb-ccd] +synonym: "potassium(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "potassium(1+)" RELATED IUPAC:NAME [iupac] +synonym: "potassium(1+) ion" EXACT IUPAC:NAME [IUPAC] +synonym: "potassium(1+) ion" RELATED IUPAC:NAME [iupac] +synonym: "potassium(I) cation" EXACT IUPAC:NAME [IUPAC] +synonym: "potassium(I) cation" RELATED IUPAC:NAME [iupac] +xref: cas:24203-36-9 {source="cas"} +xref: gmelin:15203 {source="gmelin"} +xref: kegg.compound:C00238 {source="kegg.compound"} +xref: kegg.drug:D08403 {source="kegg.drug"} +xref: pdb-ccd:K {source="pdb-ccd"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25414 ! monoatomic monocation is_a: CHEBI:33504 ! alkali metal cation @@ -6106,18 +6397,21 @@ name: calcium(2+) alt_id: CHEBI:22988 alt_id: CHEBI:3308 alt_id: CHEBI:48760 -subset: 3_STAR -synonym: "Ca(2+)" RELATED [IUPAC, UniProt] -synonym: "Ca2+" RELATED [KEGG_COMPOUND] -synonym: "CALCIUM ION" RELATED [PDBeChem] -synonym: "calcium(2+)" EXACT IUPAC_NAME [IUPAC] -synonym: "calcium(2+) ion" EXACT IUPAC_NAME [IUPAC] -synonym: "calcium(II) cation" EXACT IUPAC_NAME [IUPAC] -synonym: "calcium, doubly charged positive ion" RELATED [NIST_Chemistry_WebBook] -xref: CAS:14127-61-8 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:6850 {source="Gmelin"} -xref: KEGG:C00076 -xref: PDBeChem:CA +subset: 3:STAR +synonym: "Ca(2+)" RELATED [iupac, uniprot_ft] +synonym: "Ca2+" RELATED [kegg.compound] +synonym: "CALCIUM ION" RELATED [pdb-ccd] +synonym: "calcium(2+)" EXACT IUPAC:NAME [IUPAC] +synonym: "calcium(2+)" RELATED IUPAC:NAME [iupac] +synonym: "calcium(2+) ion" EXACT IUPAC:NAME [IUPAC] +synonym: "calcium(2+) ion" RELATED IUPAC:NAME [iupac] +synonym: "calcium(II) cation" EXACT IUPAC:NAME [IUPAC] +synonym: "calcium(II) cation" RELATED IUPAC:NAME [iupac] +synonym: "calcium, doubly charged positive ion" RELATED [nist] +xref: cas:14127-61-8 {source="cas"} +xref: gmelin:6850 {source="gmelin"} +xref: kegg.compound:C00076 {source="kegg.compound"} +xref: pdb-ccd:CA {source="pdb-ccd"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:30412 ! monoatomic dication is_a: CHEBI:39123 ! calcium cation @@ -6128,180 +6422,202 @@ relationship: RO:0000087 CHEBI:77746 ! has role human metabolite [Term] id: CHEBI:29337 name: azanide -subset: 3_STAR -synonym: "amide" EXACT IUPAC_NAME [IUPAC] -synonym: "azanide" EXACT IUPAC_NAME [IUPAC] -synonym: "dihydridonitrate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "NH2(-)" RELATED [IUPAC] +subset: 3:STAR +synonym: "amide" EXACT IUPAC:NAME [IUPAC] +synonym: "amide" RELATED IUPAC:NAME [iupac] +synonym: "azanide" EXACT IUPAC:NAME [IUPAC] +synonym: "azanide" RELATED IUPAC:NAME [iupac] +synonym: "dihydridonitrate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydridonitrate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "NH2(-)" RELATED [iupac] is_a: CHEBI:35106 ! nitrogen hydride is_a: CHEBI:79389 ! monovalent inorganic anion -relationship: is_conjugate_acid_of CHEBI:29340 ! hydridonitrate(2-) -relationship: is_conjugate_base_of CHEBI:16134 ! ammonia +relationship: RO:0018033 CHEBI:16134 ! is deprotonated form of ammonia +relationship: RO:0018034 CHEBI:29340 ! is protonated form of hydridonitrate(2-) [Term] id: CHEBI:29340 name: hydridonitrate(2-) def: "A divalent inorganic anion resulting from the removal of two protons from ammonia." [] -subset: 3_STAR -synonym: "azanediide" EXACT IUPAC_NAME [IUPAC] -synonym: "hydridonitrate(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "imide" RELATED [IUPAC] -synonym: "NH(2-)" RELATED [IUPAC] +subset: 3:STAR +synonym: "azanediide" EXACT IUPAC:NAME [IUPAC] +synonym: "azanediide" RELATED IUPAC:NAME [iupac] +synonym: "hydridonitrate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydridonitrate(2-)" RELATED IUPAC:NAME [iupac] +synonym: "imide" RELATED [iupac] +synonym: "NH(2-)" RELATED [iupac] is_a: CHEBI:35106 ! nitrogen hydride is_a: CHEBI:79388 ! divalent inorganic anion -relationship: is_conjugate_base_of CHEBI:29337 ! azanide +relationship: RO:0018033 CHEBI:29337 ! is deprotonated form of azanide [Term] id: CHEBI:29412 name: oxonium -subset: 3_STAR -synonym: "[OH3](+)" RELATED [MolBase] -synonym: "aquahydrogen(1+)" EXACT IUPAC_NAME [IUPAC] -synonym: "H3O(+)" RELATED [IUPAC] -synonym: "Hydronium cation" RELATED [NIST_Chemistry_WebBook] -synonym: "Hydronium ion" RELATED [ChemIDplus] -synonym: "oxidanium" EXACT IUPAC_NAME [IUPAC] -synonym: "oxonium" EXACT IUPAC_NAME [IUPAC] -synonym: "trihydridooxygen(1+)" EXACT IUPAC_NAME [IUPAC] -xref: CAS:13968-08-6 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:141 {source="Gmelin"} -xref: MolBase:1646 +subset: 3:STAR +synonym: "[OH3](+)" RELATED [molbase] +synonym: "aquahydrogen(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "aquahydrogen(1+)" RELATED IUPAC:NAME [iupac] +synonym: "H3O(+)" RELATED [iupac] +synonym: "Hydronium cation" RELATED [nist] +synonym: "Hydronium ion" RELATED [chemidplus] +synonym: "oxidanium" EXACT IUPAC:NAME [IUPAC] +synonym: "oxidanium" RELATED IUPAC:NAME [iupac] +synonym: "oxonium" EXACT IUPAC:NAME [IUPAC] +synonym: "oxonium" RELATED IUPAC:NAME [iupac] +synonym: "trihydridooxygen(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "trihydridooxygen(1+)" RELATED IUPAC:NAME [iupac] +xref: cas:13968-08-6 {source="cas"} +xref: gmelin:141 {source="gmelin"} +xref: molbase:1646 {source="molbase"} is_a: CHEBI:33693 ! oxygen hydride is_a: CHEBI:50313 ! onium cation -relationship: is_conjugate_acid_of CHEBI:15377 ! water +relationship: RO:0018034 CHEBI:15377 ! is protonated form of water [Term] id: CHEBI:29793 name: hydridodioxygen(1+) -subset: 3_STAR -synonym: "[HO2](+)" RELATED [ChEBI] -synonym: "dioxidenium" EXACT IUPAC_NAME [IUPAC] -synonym: "HO2(+)" RELATED [IUPAC] -synonym: "HOO(+)" RELATED [ChEBI] -synonym: "hydridodioxygen(1+)" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:508 {source="Gmelin"} +subset: 3:STAR +synonym: "[HO2](+)" RELATED [chebi] +synonym: "dioxidenium" EXACT IUPAC:NAME [IUPAC] +synonym: "dioxidenium" RELATED IUPAC:NAME [iupac] +synonym: "HO2(+)" RELATED [iupac] +synonym: "HOO(+)" RELATED [chebi] +synonym: "hydridodioxygen(1+)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydridodioxygen(1+)" RELATED IUPAC:NAME [iupac] +xref: gmelin:508 {source="gmelin"} is_a: CHEBI:33693 ! oxygen hydride -relationship: is_conjugate_acid_of CHEBI:15379 ! dioxygen +relationship: RO:0018034 CHEBI:15379 ! is protonated form of dioxygen [Term] id: CHEBI:29934 name: (1s,4s)-prephenate(2-) alt_id: CHEBI:14884 alt_id: CHEBI:26256 -def: "A prephenate(2-) obtained by deprotonation of both carboxy groups of (1s,4s)-prephenic acid; major species at pH 7.3." [] -subset: 3_STAR -synonym: "(1s,4s)-1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" EXACT IUPAC_NAME [IUPAC] -synonym: "cis-1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" EXACT IUPAC_NAME [IUPAC] -synonym: "cis-prephenate" RELATED [ChEBI] -synonym: "prephenate" RELATED [UniProt] -xref: KEGG:C00254 -xref: MetaCyc:PREPHENATE -xref: Reaxys:3682733 {source="Reaxys"} +def: "A prephenate(2−) obtained by deprotonation of both carboxy groups of (1s,4s)-prephenic acid; major species at pH 7.3." [] +subset: 3:STAR +synonym: "(1s,4s)-1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" EXACT IUPAC:NAME [IUPAC] +synonym: "(1s,4s)-1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" RELATED IUPAC:NAME [iupac] +synonym: "cis-1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" EXACT IUPAC:NAME [IUPAC] +synonym: "cis-1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" RELATED IUPAC:NAME [iupac] +synonym: "cis-prephenate" RELATED [chebi] +synonym: "prephenate" RELATED [uniprot_ft] +xref: kegg.compound:C00254 {source="kegg.compound"} +xref: metacyc.compound:PREPHENATE {source="metacyc.compound"} +xref: reaxys:3682733 {source="reaxys"} is_a: CHEBI:57852 ! prephenate(2-) -relationship: is_conjugate_base_of CHEBI:16666 ! prephenic acid -relationship: is_conjugate_base_of CHEBI:84387 ! (1s,4s)-prephenic acid relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite +relationship: RO:0018033 CHEBI:16666 ! is deprotonated form of prephenic acid +relationship: RO:0018033 CHEBI:84387 ! is deprotonated form of (1s,4s)-prephenic acid [Term] id: CHEBI:29976 name: D-tyrosine residue -subset: 3_STAR -synonym: "D-Tyr" RELATED [JCBN] -synonym: "D-tyrosine acid residue" RELATED [JCBN] -synonym: "D-tyrosine residue" EXACT [JCBN] -synonym: "D-tyrosyl" RELATED [ChEBI] -synonym: "DTyr" RELATED [JCBN] +subset: 3:STAR +synonym: "D-Tyr" RELATED [jcbn] +synonym: "D-tyrosine acid residue" RELATED [jcbn] +synonym: "D-tyrosine residue" RELATED [jcbn] +synonym: "D-tyrosyl" RELATED [chebi] +synonym: "DTyr" RELATED [jcbn] is_a: CHEBI:32789 ! tyrosine residue -relationship: is_enantiomer_of CHEBI:46858 ! L-tyrosine residue -relationship: is_substituent_group_from CHEBI:28479 ! D-tyrosine +relationship: RO:0018037 CHEBI:28479 ! is substitutent group from D-tyrosine +relationship: RO:0018039 CHEBI:46858 ! is enantiomer of L-tyrosine residue [Term] id: CHEBI:29985 name: L-glutamate(1-) alt_id: CHEBI:13107 alt_id: CHEBI:21301 -def: "An alpha-amino-acid anion that is the conjugate base of L-glutamic acid, having anionic carboxy groups and a cationic amino group" [] -subset: 3_STAR -synonym: "(2S)-2-ammoniopentanedioate" RELATED [IUPAC] -synonym: "hydrogen L-glutamate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-glutamate" RELATED [ChEBI, UniProt] -synonym: "L-glutamate(1-)" EXACT [JCBN] -synonym: "L-glutamic acid monoanion" RELATED [JCBN] -synonym: "L-glutamic acid, ion(1-)" RELATED [ChemIDplus] -xref: CAS:11070-68-1 {source="ChemIDplus"} -xref: Gmelin:936654 {source="Gmelin"} -xref: MetaCyc:GLT +def: "An α-amino-acid anion that is the conjugate base of L-glutamic acid, having anionic carboxy groups and a cationic amino group" [] +subset: 3:STAR +synonym: "(2S)-2-ammoniopentanedioate" RELATED [iupac] +synonym: "hydrogen L-glutamate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen L-glutamate" RELATED IUPAC:NAME [iupac] +synonym: "L-glutamate" EXACT [ChEBI] +synonym: "L-glutamate" RELATED [chebi, uniprot_ft] +synonym: "L-glutamate(1-)" RELATED [jcbn] +synonym: "L-glutamic acid monoanion" RELATED [jcbn] +synonym: "L-glutamic acid, ion(1-)" RELATED [chemidplus] +xref: cas:11070-68-1 {source="cas"} +xref: gmelin:936654 {source="gmelin"} +xref: metacyc.compound:GLT {source="metacyc.compound"} is_a: CHEBI:14321 ! glutamate(1-) -relationship: is_conjugate_acid_of CHEBI:29988 ! L-glutamate(2-) -relationship: is_conjugate_base_of CHEBI:16015 ! L-glutamic acid -relationship: is_enantiomer_of CHEBI:29986 ! D-glutamate(1-) relationship: RO:0000087 CHEBI:24319 ! has role EC 6.3.1.2 (glutamate--ammonia ligase) inhibitor relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:16015 ! is deprotonated form of L-glutamic acid +relationship: RO:0018034 CHEBI:29988 ! is protonated form of L-glutamate(2-) +relationship: RO:0018039 CHEBI:29986 ! is enantiomer of D-glutamate(1-) [Term] id: CHEBI:29986 name: D-glutamate(1-) alt_id: CHEBI:12979 alt_id: CHEBI:21022 -def: "An alpha-amino-acid anion that is the conjugate base of D-glutamic acid, having anionic carboxy groups and a cationic amino group" [] -subset: 3_STAR -synonym: "(2R)-2-ammoniopentanedioate" RELATED [IUPAC] -synonym: "D-glutamate" RELATED [UniProt] -synonym: "D-glutamate(1-)" EXACT [JCBN] -synonym: "D-glutamic acid monoanion" RELATED [JCBN] -synonym: "hydrogen D-glutamate" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:8319427 {source="Beilstein"} -xref: MetaCyc:D-GLT +def: "An α-amino-acid anion that is the conjugate base of D-glutamic acid, having anionic carboxy groups and a cationic amino group" [] +subset: 3:STAR +synonym: "(2R)-2-ammoniopentanedioate" RELATED [iupac] +synonym: "D-glutamate" RELATED [uniprot_ft] +synonym: "D-glutamate(1-)" RELATED [jcbn] +synonym: "D-glutamic acid monoanion" RELATED [jcbn] +synonym: "hydrogen D-glutamate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen D-glutamate" RELATED IUPAC:NAME [iupac] +xref: beilstein:8319427 {source="beilstein"} +xref: metacyc.compound:D-GLT {source="metacyc.compound"} is_a: CHEBI:14321 ! glutamate(1-) -relationship: is_conjugate_acid_of CHEBI:29989 ! D-glutamate(2-) -relationship: is_conjugate_base_of CHEBI:15966 ! D-glutamic acid -relationship: is_enantiomer_of CHEBI:29985 ! L-glutamate(1-) +relationship: RO:0018033 CHEBI:15966 ! is deprotonated form of D-glutamic acid +relationship: RO:0018034 CHEBI:29989 ! is protonated form of D-glutamate(2-) +relationship: RO:0018039 CHEBI:29985 ! is enantiomer of L-glutamate(1-) [Term] id: CHEBI:29987 name: glutamate(2-) -def: "A dicarboxylic acid dianion that is the conjugate base of glutamate(1-)." [] -subset: 3_STAR -synonym: "2-aminopentanedioate" EXACT IUPAC_NAME [IUPAC] -synonym: "glutamate" EXACT IUPAC_NAME [IUPAC] -synonym: "glutamate(2-)" EXACT [JCBN] -synonym: "glutamic acid dianion" RELATED [JCBN] -xref: Gmelin:327903 {source="Gmelin"} -xref: Reaxys:4134100 {source="Reaxys"} +def: "A dicarboxylic acid dianion that is the conjugate base of glutamate(1−)." [] +subset: 3:STAR +synonym: "2-aminopentanedioate" EXACT IUPAC:NAME [IUPAC] +synonym: "2-aminopentanedioate" RELATED IUPAC:NAME [iupac] +synonym: "glutamate" EXACT IUPAC:NAME [IUPAC] +synonym: "glutamate" RELATED IUPAC:NAME [iupac] +synonym: "glutamate(2-)" RELATED [jcbn] +synonym: "glutamic acid dianion" RELATED [jcbn] +xref: gmelin:327903 {source="gmelin"} +xref: reaxys:4134100 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:28965 ! dicarboxylic acid dianion -relationship: is_conjugate_base_of CHEBI:14321 ! glutamate(1-) relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:14321 ! is deprotonated form of glutamate(1-) [Term] id: CHEBI:29988 name: L-glutamate(2-) -def: "An L-alpha-amino acid anion that is the dianion obtained by the deprotonation of the both the carboxy groups of L-glutamic acid." [] -subset: 3_STAR -synonym: "(2S)-2-aminopentanedioate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-glutamate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-glutamate(2-)" EXACT [JCBN] -synonym: "L-glutamic acid dianion" RELATED [JCBN] -xref: Gmelin:327905 {source="Gmelin"} +def: "An L-α-amino acid anion that is the dianion obtained by the deprotonation of the both the carboxy groups of L-glutamic acid." [] +subset: 3:STAR +synonym: "(2S)-2-aminopentanedioate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-aminopentanedioate" RELATED IUPAC:NAME [iupac] +synonym: "L-glutamate" EXACT IUPAC:NAME [IUPAC] +synonym: "L-glutamate" RELATED IUPAC:NAME [iupac] +synonym: "L-glutamate(2-)" RELATED [jcbn] +synonym: "L-glutamic acid dianion" RELATED [jcbn] +xref: gmelin:327905 {source="gmelin"} is_a: CHEBI:29987 ! glutamate(2-) is_a: CHEBI:59814 ! L-alpha-amino acid anion -relationship: is_conjugate_base_of CHEBI:29985 ! L-glutamate(1-) -relationship: is_enantiomer_of CHEBI:29989 ! D-glutamate(2-) +relationship: RO:0018033 CHEBI:29985 ! is deprotonated form of L-glutamate(1-) +relationship: RO:0018039 CHEBI:29989 ! is enantiomer of D-glutamate(2-) [Term] id: CHEBI:29989 name: D-glutamate(2-) -subset: 3_STAR -synonym: "(2R)-2-aminopentanedioate" EXACT IUPAC_NAME [IUPAC] -synonym: "D-glutamate" EXACT IUPAC_NAME [IUPAC] -synonym: "D-glutamate(2-)" EXACT [JCBN] -synonym: "D-glutamic acid dianion" RELATED [JCBN] -xref: Beilstein:8143000 {source="Beilstein"} -xref: Gmelin:327904 {source="Gmelin"} +subset: 3:STAR +synonym: "(2R)-2-aminopentanedioate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-aminopentanedioate" RELATED IUPAC:NAME [iupac] +synonym: "D-glutamate" EXACT IUPAC:NAME [IUPAC] +synonym: "D-glutamate" RELATED IUPAC:NAME [iupac] +synonym: "D-glutamate(2-)" RELATED [jcbn] +synonym: "D-glutamic acid dianion" RELATED [jcbn] +xref: beilstein:8143000 {source="beilstein"} +xref: gmelin:327904 {source="gmelin"} is_a: CHEBI:29987 ! glutamate(2-) -relationship: is_conjugate_base_of CHEBI:29986 ! D-glutamate(1-) -relationship: is_enantiomer_of CHEBI:29988 ! L-glutamate(2-) +relationship: RO:0018033 CHEBI:29986 ! is deprotonated form of D-glutamate(1-) +relationship: RO:0018039 CHEBI:29988 ! is enantiomer of L-glutamate(2-) [Term] id: CHEBI:30089 @@ -6310,48 +6626,51 @@ alt_id: CHEBI:13704 alt_id: CHEBI:22165 alt_id: CHEBI:40480 def: "A monocarboxylic acid anion resulting from the removal of a proton from the carboxy group of acetic acid." [] -subset: 3_STAR -synonym: "acetate" EXACT IUPAC_NAME [IUPAC, UniProt] -synonym: "ACETATE ION" RELATED [PDBeChem] -synonym: "acetic acid, ion(1-)" RELATED [ChemIDplus] -synonym: "Azetat" RELATED [ChEBI] -synonym: "CH3-COO(-)" RELATED [IUPAC] -synonym: "Ethanoat" RELATED [ChEBI] -synonym: "ethanoate" RELATED [ChEBI] -synonym: "MeCO2 anion" RELATED [NIST_Chemistry_WebBook] -xref: CAS:71-50-1 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: DrugBank:DB03166 -xref: Gmelin:1379 {source="Gmelin"} -xref: KEGG:C00033 -xref: MetaCyc:ACET -xref: PDBeChem:ACT -xref: PMID:17190852 {source="Europe PMC"} -xref: PMID:22211106 {source="Europe PMC"} -xref: PMID:22371380 {source="Europe PMC"} -xref: Reaxys:1901470 {source="Reaxys"} -xref: UM-BBD_compID:c0050 {source="UM-BBD"} -xref: Wikipedia:Acetate +subset: 3:STAR +synonym: "acetate" EXACT IUPAC:NAME [IUPAC] +synonym: "acetate" RELATED IUPAC:NAME [iupac, uniprot_ft] +synonym: "ACETATE ION" RELATED [pdb-ccd] +synonym: "acetic acid, ion(1-)" RELATED [chemidplus] +synonym: "Azetat" RELATED [chebi] +synonym: "CH3-COO(-)" RELATED [iupac] +synonym: "Ethanoat" RELATED [chebi] +synonym: "ethanoate" RELATED [chebi] +synonym: "MeCO2 anion" RELATED [nist] +xref: cas:71-50-1 {source="cas"} +xref: drugbank:DB03166 {source="drugbank"} +xref: gmelin:1379 {source="gmelin"} +xref: kegg.compound:C00033 {source="kegg.compound"} +xref: metacyc.compound:ACET {source="metacyc.compound"} +xref: pdb-ccd:ACT {source="pdb-ccd"} +xref: pubmed:17190852 {source="pubmed"} +xref: pubmed:22211106 {source="pubmed"} +xref: pubmed:22371380 {source="pubmed"} +xref: reaxys:1901470 {source="reaxys"} +xref: umbbd.compound:c0050 {source="umbbd.compound"} +xref: wikipedia.en:Acetate {source="wikipedia.en"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35757 ! monocarboxylic acid anion -relationship: is_conjugate_base_of CHEBI:15366 ! acetic acid relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:15366 ! is deprotonated form of acetic acid [Term] id: CHEBI:30212 name: photon alt_id: CHEBI:10581 alt_id: CHEBI:14383 -def: "Particle of zero charge, zero rest mass, spin quantum number 1, energy hnu and momentum hnu/c (h is the Planck constant, nu the frequency of radiation and c the speed of light), carrier of electromagnetic force." [] -subset: 3_STAR -synonym: "foton" RELATED [ChEBI] -synonym: "gamma" RELATED [IUPAC] -synonym: "hnu" RELATED [IUPAC, UniProt] -synonym: "Lichtquant" RELATED [ChEBI] -synonym: "Light" RELATED [KEGG_COMPOUND] -synonym: "light quantum" RELATED [ChEBI] -synonym: "photon" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C00205 +def: "Particle of zero charge, zero rest mass, spin quantum number 1, energy hν and momentum hν/c (h is the Planck constant, ν the frequency of radiation and c the speed of light), carrier of electromagnetic force." [] +subset: 3:STAR +synonym: "foton" RELATED [chebi] +synonym: "gamma" RELATED [iupac] +synonym: "h-nu" RELATED [uniprot_ft] +synonym: "hnu" RELATED [iupac] +synonym: "Lichtquant" RELATED [chebi] +synonym: "Light" RELATED [kegg.compound] +synonym: "light quantum" RELATED [chebi] +synonym: "photon" EXACT IUPAC:NAME [IUPAC] +synonym: "photon" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C00205 {source="kegg.compound"} is_a: CHEBI:36341 ! boson [Term] @@ -6359,11 +6678,11 @@ id: CHEBI:30412 name: monoatomic dication alt_id: CHEBI:23856 alt_id: CHEBI:4665 -subset: 3_STAR -synonym: "Divalent cation" RELATED [KEGG_COMPOUND] -synonym: "divalent inorganic cations" RELATED [ChEBI] -synonym: "monoatomic dications" RELATED [ChEBI] -xref: KEGG:C00572 +subset: 3:STAR +synonym: "Divalent cation" RELATED [kegg.compound] +synonym: "divalent inorganic cations" RELATED [chebi] +synonym: "monoatomic dications" RELATED [chebi] +xref: kegg.compound:C00572 {source="kegg.compound"} is_a: CHEBI:23906 ! monoatomic cation [Term] @@ -6371,41 +6690,43 @@ id: CHEBI:30566 name: gamma-aminobutyrate alt_id: CHEBI:11961 alt_id: CHEBI:20317 -def: "An gamma-amino acid anion resulting from the deprotonation of the carboxy group of gamma-aminobutyric acid." [] -subset: 3_STAR -synonym: "4-Amino-butyrat" RELATED [ChEBI] -synonym: "4-aminobutanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "4-aminobutanoic acid ion (1-)" RELATED [ChEBI] -synonym: "4-Aminobutylate" RELATED [KEGG_COMPOUND] -synonym: "4-aminobutyrate" RELATED [ChEBI] -synonym: "gamma-aminobutanoate" RELATED [ChEBI] -synonym: "gamma-aminobutyrate anion" RELATED [ChEBI] -xref: Gmelin:559138 {source="Gmelin"} -xref: KEGG:C00334 -xref: PMID:12509893 {source="Europe PMC"} -xref: Reaxys:3536873 {source="Reaxys"} +def: "An γ-amino acid anion resulting from the deprotonation of the carboxy group of γ-aminobutyric acid." [] +subset: 3:STAR +synonym: "4-Amino-butyrat" RELATED [chebi] +synonym: "4-aminobutanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "4-aminobutanoate" RELATED IUPAC:NAME [iupac] +synonym: "4-aminobutanoic acid ion (1-)" RELATED [chebi] +synonym: "4-Aminobutylate" RELATED [kegg.compound] +synonym: "4-aminobutyrate" RELATED [chebi] +synonym: "gamma-aminobutanoate" RELATED [chebi] +synonym: "gamma-aminobutyrate anion" RELATED [chebi] +xref: gmelin:559138 {source="gmelin"} +xref: kegg.compound:C00334 {source="kegg.compound"} +xref: pubmed:12509893 {source="pubmed"} +xref: reaxys:3536873 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:71666 ! gamma-amino acid anion -relationship: has_functional_parent CHEBI:17968 ! butyrate -relationship: is_conjugate_base_of CHEBI:16865 ! gamma-aminobutyric acid relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:16865 ! is deprotonated form of gamma-aminobutyric acid +relationship: RO:0018038 CHEBI:17968 ! has functional parent butyrate [Term] id: CHEBI:30616 name: ATP(4-) -def: "A nucleoside triphosphate(4-) obtained by global deprotonation of the triphosphate OH groups of ATP; major species present at pH 7.3." [] -subset: 3_STAR -synonym: "adenosine 5'-triphosphate(4-)" EXACT IUPAC_NAME [IUPAC] -synonym: "ATP" RELATED [UniProt] -synonym: "atp" RELATED [IUPAC] -xref: Beilstein:3581767 {source="Beilstein"} -xref: Gmelin:342798 {source="Gmelin"} +def: "A nucleoside triphosphate(4−) obtained by global deprotonation of the triphosphate OH groups of ATP; major species present at pH 7.3." [] +subset: 3:STAR +synonym: "adenosine 5'-triphosphate(4-)" EXACT IUPAC:NAME [IUPAC] +synonym: "adenosine 5'-triphosphate(4-)" RELATED IUPAC:NAME [iupac] +synonym: "ATP" RELATED [uniprot_ft] +synonym: "atp" RELATED [iupac] +xref: beilstein:3581767 {source="beilstein"} +xref: gmelin:342798 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:61557 ! nucleoside 5'-triphoshate(4-) -relationship: is_conjugate_base_of CHEBI:57299 ! ATP(3-) relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:57299 ! is deprotonated form of ATP(3-) [Term] id: CHEBI:30751 @@ -6414,64 +6735,67 @@ alt_id: CHEBI:24082 alt_id: CHEBI:42460 alt_id: CHEBI:5145 def: "The simplest carboxylic acid, containing a single carbon. Occurs naturally in various sources including the venom of bee and ant stings, and is a useful organic synthetic reagent. Principally used as a preservative and antibacterial agent in livestock feed. Induces severe metabolic acidosis and ocular injury in human subjects." [] -subset: 3_STAR -synonym: "Acide formique" RELATED [ChemIDplus] -synonym: "Ameisensaeure" RELATED [ChemIDplus] -synonym: "aminic acid" RELATED [ChemIDplus] -synonym: "bilorin" RELATED [ChemIDplus] +subset: 3:STAR +synonym: "Acide formique" RELATED [chemidplus] +synonym: "Ameisensaeure" RELATED [chemidplus] +synonym: "aminic acid" RELATED [chemidplus] +synonym: "bilorin" RELATED [chemidplus] synonym: "FORMIC ACID" EXACT [PDBeChem] +synonym: "FORMIC ACID" RELATED [pdb-ccd] synonym: "Formic acid" EXACT [KEGG_COMPOUND] -synonym: "formic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "formylic acid" RELATED [ChemIDplus] -synonym: "H-COOH" RELATED [IUPAC] -synonym: "HCO2H" RELATED [ChEBI] -synonym: "HCOOH" RELATED [NIST_Chemistry_WebBook] -synonym: "hydrogen carboxylic acid" RELATED [ChemIDplus] -synonym: "Methanoic acid" RELATED [KEGG_COMPOUND] -synonym: "methoic acid" RELATED [ChEBI] -xref: BPDB:1749 -xref: CAS:64-18-6 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB01942 -xref: Gmelin:1008 {source="Gmelin"} -xref: HMDB:HMDB0000142 -xref: KEGG:C00058 -xref: KNApSAcK:C00001182 -xref: LIPID_MAPS_instance:LMFA01010040 {source="LIPID MAPS"} -xref: MetaCyc:FORMATE -xref: Patent:CN101481304 -xref: PDBeChem:FMT -xref: PMID:12591956 {source="Europe PMC"} -xref: PMID:14637377 {source="Europe PMC"} -xref: PMID:15811469 {source="Europe PMC"} -xref: PMID:16120414 {source="Europe PMC"} -xref: PMID:16185830 {source="Europe PMC"} -xref: PMID:16222862 {source="Europe PMC"} -xref: PMID:16230297 {source="Europe PMC"} -xref: PMID:16445901 {source="Europe PMC"} -xref: PMID:16465784 {source="Europe PMC"} -xref: PMID:18034701 {source="Europe PMC"} -xref: PMID:18397576 {source="Europe PMC"} -xref: PMID:22080171 {source="Europe PMC"} -xref: PMID:22280475 {source="Europe PMC"} -xref: PMID:22304812 {source="Europe PMC"} -xref: PMID:22385261 {source="Europe PMC"} -xref: PMID:22447125 {source="Europe PMC"} -xref: PMID:22483350 {source="Europe PMC"} -xref: PMID:22499553 {source="Europe PMC"} -xref: PMID:22540994 {source="Europe PMC"} -xref: PMID:22606986 {source="Europe PMC"} -xref: PMID:22622393 {source="Europe PMC"} -xref: PMID:3946945 {source="Europe PMC"} -xref: PMID:7361809 {source="Europe PMC"} -xref: Reaxys:1209246 {source="Reaxys"} -xref: Wikipedia:Formic_acid +synonym: "Formic acid" RELATED [kegg.compound] +synonym: "formic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "formic acid" RELATED IUPAC:NAME [iupac] +synonym: "formylic acid" RELATED [chemidplus] +synonym: "H-COOH" RELATED [iupac] +synonym: "HCO2H" RELATED [chebi] +synonym: "HCOOH" RELATED [nist] +synonym: "hydrogen carboxylic acid" RELATED [chemidplus] +synonym: "Methanoic acid" RELATED [kegg.compound] +synonym: "methoic acid" RELATED [chebi] +xref: bpdb:1749 {source="bpdb"} +xref: cas:64-18-6 {source="cas"} +xref: drugbank:DB01942 {source="drugbank"} +xref: gmelin:1008 {source="gmelin"} +xref: hmdb:HMDB0000142 {source="hmdb"} +xref: kegg.compound:C00058 {source="kegg.compound"} +xref: knapsack:C00001182 {source="knapsack"} +xref: lipidmaps:LMFA01010040 {source="lipidmaps"} +xref: metacyc.compound:FORMATE {source="metacyc.compound"} +xref: patent:CN101481304 {source="patent"} +xref: pdb-ccd:FMT {source="pdb-ccd"} +xref: pubmed:12591956 {source="pubmed"} +xref: pubmed:14637377 {source="pubmed"} +xref: pubmed:15811469 {source="pubmed"} +xref: pubmed:16120414 {source="pubmed"} +xref: pubmed:16185830 {source="pubmed"} +xref: pubmed:16222862 {source="pubmed"} +xref: pubmed:16230297 {source="pubmed"} +xref: pubmed:16445901 {source="pubmed"} +xref: pubmed:16465784 {source="pubmed"} +xref: pubmed:18034701 {source="pubmed"} +xref: pubmed:18397576 {source="pubmed"} +xref: pubmed:22080171 {source="pubmed"} +xref: pubmed:22280475 {source="pubmed"} +xref: pubmed:22304812 {source="pubmed"} +xref: pubmed:22385261 {source="pubmed"} +xref: pubmed:22447125 {source="pubmed"} +xref: pubmed:22483350 {source="pubmed"} +xref: pubmed:22499553 {source="pubmed"} +xref: pubmed:22540994 {source="pubmed"} +xref: pubmed:22606986 {source="pubmed"} +xref: pubmed:22622393 {source="pubmed"} +xref: pubmed:3946945 {source="pubmed"} +xref: pubmed:7361809 {source="pubmed"} +xref: reaxys:1209246 {source="reaxys"} +xref: wikipedia.en:Formic_acid {source="wikipedia.en"} is_a: CHEBI:25384 ! monocarboxylic acid -relationship: is_conjugate_acid_of CHEBI:15740 ! formate relationship: RO:0000087 CHEBI:25212 ! has role metabolite relationship: RO:0000087 CHEBI:33282 ! has role antibacterial agent relationship: RO:0000087 CHEBI:46787 ! has role solvent relationship: RO:0000087 CHEBI:48356 ! has role protic solvent relationship: RO:0000087 CHEBI:74783 ! has role astringent +relationship: RO:0018034 CHEBI:15740 ! is protonated form of formate [Term] id: CHEBI:30768 @@ -6480,41 +6804,44 @@ alt_id: CHEBI:26304 alt_id: CHEBI:45227 alt_id: CHEBI:8476 def: "A short-chain saturated fatty acid comprising ethane attached to the carbon of a carboxy group." [] -subset: 3_STAR -synonym: "acide propanoique" RELATED [ChEBI] -synonym: "acide propionique" RELATED [NIST_Chemistry_WebBook] -synonym: "carboxyethane" RELATED [ChemIDplus] -synonym: "CH3-CH2-COOH" RELATED [IUPAC] -synonym: "ethanecarboxylic acid" RELATED [ChemIDplus] -synonym: "ethylformic acid" RELATED [ChemIDplus] -synonym: "metacetonic acid" RELATED [ChemIDplus] -synonym: "methylacetic acid" RELATED [ChemIDplus] -synonym: "PA" RELATED [ChEBI] -synonym: "PROPANOIC ACID" RELATED [PDBeChem] -synonym: "Propanoic acid" RELATED [KEGG_COMPOUND] -synonym: "propanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "propioic acid" RELATED [LIPID_MAPS] -synonym: "Propionic acid" EXACT [KEGG_COMPOUND] -synonym: "propionic acid" EXACT [IUPAC] -synonym: "Propionsaeure" RELATED [ChEBI] -synonym: "propoic acid" RELATED [ChEBI] -synonym: "pseudoacetic acid" RELATED [ChemIDplus] -xref: Beilstein:506071 {source="Beilstein"} -xref: CAS:79-09-4 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB03766 -xref: Gmelin:1821 {source="Gmelin"} -xref: KEGG:C00163 -xref: KEGG:D02310 -xref: LIPID_MAPS_instance:LMFA01010003 {source="LIPID MAPS"} -xref: PDBeChem:PPI -xref: PMID:15868474 {source="Europe PMC"} -xref: PMID:1628870 {source="Europe PMC"} -xref: PMID:16763906 {source="Europe PMC"} -xref: PPDB:1341 +subset: 3:STAR +synonym: "acide propanoique" RELATED [chebi] +synonym: "acide propionique" RELATED [nist] +synonym: "carboxyethane" RELATED [chemidplus] +synonym: "CH3-CH2-COOH" RELATED [iupac] +synonym: "ethanecarboxylic acid" RELATED [chemidplus] +synonym: "ethylformic acid" RELATED [chemidplus] +synonym: "metacetonic acid" RELATED [chemidplus] +synonym: "methylacetic acid" RELATED [chemidplus] +synonym: "PA" RELATED [chebi] +synonym: "PROPANOIC ACID" EXACT [PDBeChem] +synonym: "PROPANOIC ACID" RELATED [pdb-ccd] +synonym: "Propanoic acid" EXACT [KEGG_COMPOUND] +synonym: "Propanoic acid" RELATED [kegg.compound] +synonym: "propanoic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "propanoic acid" RELATED IUPAC:NAME [iupac] +synonym: "propioic acid" RELATED [lipidmaps] +synonym: "Propionic acid" RELATED [kegg.compound] +synonym: "propionic acid" RELATED [iupac] +synonym: "Propionsaeure" RELATED [chebi] +synonym: "propoic acid" RELATED [chebi] +synonym: "pseudoacetic acid" RELATED [chemidplus] +xref: beilstein:506071 {source="beilstein"} +xref: cas:79-09-4 {source="cas"} +xref: drugbank:DB03766 {source="drugbank"} +xref: gmelin:1821 {source="gmelin"} +xref: kegg.compound:C00163 {source="kegg.compound"} +xref: kegg.drug:D02310 {source="kegg.drug"} +xref: lipidmaps:LMFA01010003 {source="lipidmaps"} +xref: pdb-ccd:PPI {source="pdb-ccd"} +xref: ppdb:1341 {source="ppdb"} +xref: pubmed:15868474 {source="pubmed"} +xref: pubmed:1628870 {source="pubmed"} +xref: pubmed:16763906 {source="pubmed"} is_a: CHEBI:26607 ! saturated fatty acid is_a: CHEBI:26666 ! short-chain fatty acid -relationship: is_conjugate_acid_of CHEBI:17272 ! propionate relationship: RO:0000087 CHEBI:86327 ! has role antifungal drug +relationship: RO:0018034 CHEBI:17272 ! is protonated form of propionate [Term] id: CHEBI:30772 @@ -6524,67 +6851,70 @@ alt_id: CHEBI:22948 alt_id: CHEBI:3234 alt_id: CHEBI:41208 def: "A straight-chain saturated fatty acid that is butane in which one of the terminal methyl groups has been oxidised to a carboxy group." [] -subset: 3_STAR -synonym: "1-butanoic acid" RELATED [HMDB] -synonym: "1-butyric acid" RELATED [HMDB] -synonym: "1-propanecarboxylic acid" RELATED [MetaCyc] -synonym: "4:0" RELATED [ChEBI] -synonym: "acide butanoique" RELATED [IUPAC] -synonym: "acide butyrique" RELATED [ChEBI] -synonym: "butanic acid" RELATED [ChEBI] -synonym: "Butanoate" RELATED [KEGG_COMPOUND] -synonym: "BUTANOIC ACID" RELATED [PDBeChem] -synonym: "Butanoic acid" RELATED [KEGG_COMPOUND] -synonym: "butanoic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "butoic acid" RELATED [ChEBI] -synonym: "Buttersaeure" RELATED [ChEBI] -synonym: "Butyric acid" EXACT [KEGG_COMPOUND] -synonym: "butyric acid" EXACT [IUPAC] -synonym: "C4:0" RELATED [ChEBI] -synonym: "CH3-[CH2]2-COOH" RELATED [IUPAC] -synonym: "ethylacetic acid" RELATED [NIST_Chemistry_WebBook] -synonym: "n-butanoic acid" RELATED [NIST_Chemistry_WebBook] -synonym: "n-butyric acid" RELATED [NIST_Chemistry_WebBook] -synonym: "propanecarboxylic acid" RELATED [HMDB] -synonym: "propylformic acid" RELATED [MetaCyc] -xref: CAS:107-92-6 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB03568 -xref: Gmelin:26242 {source="Gmelin"} -xref: HMDB:HMDB0000039 -xref: KEGG:C00246 -xref: KNApSAcK:C00001180 -xref: LIPID_MAPS_instance:LMFA01010004 {source="LIPID MAPS"} -xref: MetaCyc:BUTYRIC_ACID -xref: PDBeChem:BUA -xref: PMID:10736622 {source="Europe PMC"} -xref: PMID:10956204 {source="ChEMBL"} -xref: PMID:11201044 {source="Europe PMC"} -xref: PMID:11208715 {source="Europe PMC"} -xref: PMID:11238216 {source="Europe PMC"} -xref: PMID:11305323 {source="Europe PMC"} -xref: PMID:12068484 {source="Europe PMC"} -xref: PMID:13678314 {source="Europe PMC"} -xref: PMID:14962641 {source="Europe PMC"} -xref: PMID:1542095 {source="ChEMBL"} -xref: PMID:15809727 {source="Europe PMC"} -xref: PMID:15810631 {source="Europe PMC"} -xref: PMID:15938880 {source="Europe PMC"} -xref: PMID:19318247 {source="Europe PMC"} -xref: PMID:19366864 {source="Europe PMC"} -xref: PMID:19703412 {source="Europe PMC"} -xref: PMID:21699495 {source="Europe PMC"} -xref: PMID:22038864 {source="Europe PMC"} -xref: PMID:22194341 {source="Europe PMC"} -xref: PMID:22322557 {source="Europe PMC"} -xref: PMID:22339023 {source="Europe PMC"} -xref: PMID:22466881 {source="Europe PMC"} -xref: Reaxys:906770 {source="Reaxys"} -xref: Wikipedia:Butyric_acid +subset: 3:STAR +synonym: "1-butanoic acid" RELATED [hmdb] +synonym: "1-butyric acid" RELATED [hmdb] +synonym: "1-propanecarboxylic acid" RELATED [metacyc.compound] +synonym: "4:0" RELATED [chebi] +synonym: "acide butanoique" RELATED [iupac] +synonym: "acide butyrique" RELATED [chebi] +synonym: "butanic acid" RELATED [chebi] +synonym: "Butanoate" RELATED [kegg.compound] +synonym: "BUTANOIC ACID" EXACT [PDBeChem] +synonym: "BUTANOIC ACID" RELATED [pdb-ccd] +synonym: "Butanoic acid" EXACT [KEGG_COMPOUND] +synonym: "Butanoic acid" RELATED [kegg.compound] +synonym: "butanoic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "butanoic acid" RELATED IUPAC:NAME [iupac] +synonym: "butoic acid" RELATED [chebi] +synonym: "Buttersaeure" RELATED [chebi] +synonym: "Butyric acid" RELATED [kegg.compound] +synonym: "butyric acid" RELATED [iupac] +synonym: "C4:0" RELATED [chebi] +synonym: "CH3-[CH2]2-COOH" RELATED [iupac] +synonym: "ethylacetic acid" RELATED [nist] +synonym: "n-butanoic acid" RELATED [nist] +synonym: "n-butyric acid" RELATED [nist] +synonym: "propanecarboxylic acid" RELATED [hmdb] +synonym: "propylformic acid" RELATED [metacyc.compound] +xref: cas:107-92-6 {source="cas"} +xref: drugbank:DB03568 {source="drugbank"} +xref: gmelin:26242 {source="gmelin"} +xref: hmdb:HMDB0000039 {source="hmdb"} +xref: kegg.compound:C00246 {source="kegg.compound"} +xref: knapsack:C00001180 {source="knapsack"} +xref: lipidmaps:LMFA01010004 {source="lipidmaps"} +xref: metacyc.compound:BUTYRIC_ACID {source="metacyc.compound"} +xref: pdb-ccd:BUA {source="pdb-ccd"} +xref: pubmed:10736622 {source="pubmed"} +xref: pubmed:10956204 {source="pubmed"} +xref: pubmed:11201044 {source="pubmed"} +xref: pubmed:11208715 {source="pubmed"} +xref: pubmed:11238216 {source="pubmed"} +xref: pubmed:11305323 {source="pubmed"} +xref: pubmed:12068484 {source="pubmed"} +xref: pubmed:13678314 {source="pubmed"} +xref: pubmed:14962641 {source="pubmed"} +xref: pubmed:1542095 {source="pubmed"} +xref: pubmed:15809727 {source="pubmed"} +xref: pubmed:15810631 {source="pubmed"} +xref: pubmed:15938880 {source="pubmed"} +xref: pubmed:19318247 {source="pubmed"} +xref: pubmed:19366864 {source="pubmed"} +xref: pubmed:19703412 {source="pubmed"} +xref: pubmed:21699495 {source="pubmed"} +xref: pubmed:22038864 {source="pubmed"} +xref: pubmed:22194341 {source="pubmed"} +xref: pubmed:22322557 {source="pubmed"} +xref: pubmed:22339023 {source="pubmed"} +xref: pubmed:22466881 {source="pubmed"} +xref: reaxys:906770 {source="reaxys"} +xref: wikipedia.en:Butyric_acid {source="wikipedia.en"} is_a: CHEBI:140601 ! fatty acid 4:0 is_a: CHEBI:39418 ! straight-chain saturated fatty acid -relationship: is_conjugate_acid_of CHEBI:17968 ! butyrate relationship: RO:0000087 CHEBI:131604 ! has role Mycoplasma genitalium metabolite relationship: RO:0000087 CHEBI:84087 ! has role human urinary metabolite +relationship: RO:0018034 CHEBI:17968 ! is protonated form of butyrate [Term] id: CHEBI:30879 @@ -6592,265 +6922,281 @@ name: alcohol alt_id: CHEBI:13804 alt_id: CHEBI:22288 alt_id: CHEBI:2553 -def: "A compound in which a hydroxy group, -OH, is attached to a saturated carbon atom." [] -subset: 3_STAR -synonym: "Alcohol" EXACT [KEGG_COMPOUND] -synonym: "alcohols" EXACT IUPAC_NAME [IUPAC] -synonym: "an alcohol" RELATED [UniProt] -xref: KEGG:C00069 +def: "A compound in which a hydroxy group, ‒OH, is attached to a saturated carbon atom." [] +subset: 3:STAR +synonym: "Alcohol" RELATED [kegg.compound] +synonym: "alcohols" EXACT IUPAC:NAME [IUPAC] +synonym: "alcohols" RELATED IUPAC:NAME [iupac] +synonym: "an alcohol" RELATED [uniprot_ft] +xref: kegg.compound:C00069 {source="kegg.compound"} is_a: CHEBI:33822 ! organic hydroxy compound [Term] id: CHEBI:3098 name: bile acid -def: "Any member of a group of hydroxy-5beta-cholanic acids occuring in bile, where they are present as the sodium salts of their amides with glycine or taurine. In mammals bile acids almost invariably have 5beta-configuration." [] -subset: 3_STAR -synonym: "5beta-bile acid" RELATED [ChEBI] -synonym: "5beta-bile acids" RELATED [ChEBI] -synonym: "Bile acid" EXACT [KEGG_COMPOUND] -synonym: "bile acids" RELATED [ChEBI] -synonym: "Bile salt" RELATED [KEGG_COMPOUND] -synonym: "Gallensaeure" RELATED [ChEBI] -synonym: "Gallensaeuren" RELATED [ChEBI] -xref: KEGG:C01558 +def: "Any member of a group of hydroxy-5β-cholanic acids occuring in bile, where they are present as the sodium salts of their amides with glycine or taurine. In mammals bile acids almost invariably have 5β-configuration." [] +subset: 3:STAR +synonym: "5beta-bile acid" RELATED [chebi] +synonym: "5beta-bile acids" RELATED [chebi] +synonym: "Bile acid" RELATED [kegg.compound] +synonym: "bile acids" RELATED [chebi] +synonym: "Bile salt" RELATED [kegg.compound] +synonym: "Gallensaeure" RELATED [chebi] +synonym: "Gallensaeuren" RELATED [chebi] +xref: kegg.compound:C01558 {source="kegg.compound"} is_a: CHEBI:138366 ! bile acids is_a: CHEBI:24663 ! hydroxy-5beta-cholanic acid [Term] id: CHEBI:32486 name: L-phenylalaninate -def: "An optically active form of phenylalaninate having L-configuration." [] -subset: 3_STAR -synonym: "(2S)-2-amino-3-phenylpropanoate" RELATED [IUPAC] -synonym: "L-phenylalaninate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-phenylalanine anion" RELATED [JCBN] -xref: Gmelin:329084 {source="Gmelin"} -xref: PMID:21956539 {source="Europe PMC"} -xref: Reaxys:4136718 {source="Reaxys"} +def: "An optically active form of phenylalaninate having L-configuration." [] +subset: 3:STAR +synonym: "(2S)-2-amino-3-phenylpropanoate" RELATED [iupac] +synonym: "L-phenylalaninate" EXACT IUPAC:NAME [IUPAC] +synonym: "L-phenylalaninate" RELATED IUPAC:NAME [iupac] +synonym: "L-phenylalanine anion" RELATED [jcbn] +xref: gmelin:329084 {source="gmelin"} +xref: pubmed:21956539 {source="pubmed"} +xref: reaxys:4136718 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32504 ! phenylalaninate is_a: CHEBI:59814 ! L-alpha-amino acid anion -relationship: is_conjugate_base_of CHEBI:17295 ! L-phenylalanine -relationship: is_enantiomer_of CHEBI:32494 ! D-phenylalaninate relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018033 CHEBI:17295 ! is deprotonated form of L-phenylalanine +relationship: RO:0018039 CHEBI:32494 ! is enantiomer of D-phenylalaninate [Term] id: CHEBI:32487 name: L-phenylalaninium -def: "An optically active form of phenylalaninium having L-configuration." [] -subset: 3_STAR -synonym: "(1S)-1-carboxy-2-phenylethanaminium" RELATED [IUPAC] -synonym: "L-phenylalanine cation" RELATED [JCBN] -synonym: "L-phenylalaninium" EXACT IUPAC_NAME [IUPAC] -xref: PMID:21956539 {source="Europe PMC"} +def: "An optically active form of phenylalaninium having L-configuration." [] +subset: 3:STAR +synonym: "(1S)-1-carboxy-2-phenylethanaminium" RELATED [iupac] +synonym: "L-phenylalanine cation" RELATED [jcbn] +synonym: "L-phenylalaninium" EXACT IUPAC:NAME [IUPAC] +synonym: "L-phenylalaninium" RELATED IUPAC:NAME [iupac] +xref: pubmed:21956539 {source="pubmed"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32505 ! phenylalaninium -relationship: is_conjugate_acid_of CHEBI:17295 ! L-phenylalanine -relationship: is_enantiomer_of CHEBI:32495 ! D-phenylalaninium relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:17295 ! is protonated form of L-phenylalanine +relationship: RO:0018039 CHEBI:32495 ! is enantiomer of D-phenylalaninium [Term] id: CHEBI:32494 name: D-phenylalaninate -def: "The D-enantiomer of phenylalaninate." [] -subset: 3_STAR -synonym: "(2R)-2-amino-3-phenylpropanoate" RELATED [IUPAC] -synonym: "D-phenylalaninate" EXACT IUPAC_NAME [IUPAC] -synonym: "D-phenylalanine anion" RELATED [JCBN] -xref: Beilstein:5740552 {source="Beilstein"} -xref: Gmelin:746993 {source="Gmelin"} +def: "The D-enantiomer of phenylalaninate." [] +subset: 3:STAR +synonym: "(2R)-2-amino-3-phenylpropanoate" RELATED [iupac] +synonym: "D-phenylalaninate" EXACT IUPAC:NAME [IUPAC] +synonym: "D-phenylalaninate" RELATED IUPAC:NAME [iupac] +synonym: "D-phenylalanine anion" RELATED [jcbn] +xref: beilstein:5740552 {source="beilstein"} +xref: gmelin:746993 {source="gmelin"} is_a: CHEBI:32504 ! phenylalaninate -relationship: is_conjugate_base_of CHEBI:16998 ! D-phenylalanine -relationship: is_enantiomer_of CHEBI:32486 ! L-phenylalaninate +relationship: RO:0018033 CHEBI:16998 ! is deprotonated form of D-phenylalanine +relationship: RO:0018039 CHEBI:32486 ! is enantiomer of L-phenylalaninate [Term] id: CHEBI:32495 name: D-phenylalaninium -def: "An optically active form of phenylalaninium having D-configuration." [] -subset: 3_STAR -synonym: "(1R)-1-carboxy-2-phenylethanaminium" RELATED [IUPAC] -synonym: "D-phenylalanine cation" RELATED [JCBN] -synonym: "D-phenylalaninium" EXACT IUPAC_NAME [IUPAC] +def: "An optically active form of phenylalaninium having D-configuration." [] +subset: 3:STAR +synonym: "(1R)-1-carboxy-2-phenylethanaminium" RELATED [iupac] +synonym: "D-phenylalanine cation" RELATED [jcbn] +synonym: "D-phenylalaninium" EXACT IUPAC:NAME [IUPAC] +synonym: "D-phenylalaninium" RELATED IUPAC:NAME [iupac] is_a: CHEBI:32505 ! phenylalaninium -relationship: is_conjugate_acid_of CHEBI:16998 ! D-phenylalanine -relationship: is_enantiomer_of CHEBI:32487 ! L-phenylalaninium +relationship: RO:0018034 CHEBI:16998 ! is protonated form of D-phenylalanine +relationship: RO:0018039 CHEBI:32487 ! is enantiomer of L-phenylalaninium [Term] id: CHEBI:32504 name: phenylalaninate def: "An aromatic amino-acid anion that is the conjugate base of phenylalanine, arising from deprotonation of the carboxy group." [] -subset: 3_STAR -synonym: "2-amino-3-phenylpropanoate" RELATED [IUPAC] -synonym: "phenylalaninate" EXACT IUPAC_NAME [IUPAC] -synonym: "phenylalanine anion" RELATED [JCBN] -xref: Gmelin:329083 {source="Gmelin"} +subset: 3:STAR +synonym: "2-amino-3-phenylpropanoate" RELATED [iupac] +synonym: "phenylalaninate" EXACT IUPAC:NAME [IUPAC] +synonym: "phenylalaninate" RELATED IUPAC:NAME [iupac] +synonym: "phenylalanine anion" RELATED [jcbn] +xref: gmelin:329083 {source="gmelin"} is_a: CHEBI:33558 ! alpha-amino-acid anion is_a: CHEBI:63473 ! aromatic amino-acid anion -relationship: is_conjugate_base_of CHEBI:28044 ! phenylalanine +relationship: RO:0018033 CHEBI:28044 ! is deprotonated form of phenylalanine [Term] id: CHEBI:32505 name: phenylalaninium -def: "An alpha-amino-acid cation that is the conjugate acid of phenylalanine, arising from protonation of the amino group." [] -subset: 3_STAR -synonym: "1-carboxy-2-phenylethanaminium" RELATED [IUPAC] -synonym: "phenylalanine cation" RELATED [JCBN] -synonym: "phenylalaninium" EXACT IUPAC_NAME [IUPAC] +def: "An α-amino-acid cation that is the conjugate acid of phenylalanine, arising from protonation of the amino group." [] +subset: 3:STAR +synonym: "1-carboxy-2-phenylethanaminium" RELATED [iupac] +synonym: "phenylalanine cation" RELATED [jcbn] +synonym: "phenylalaninium" EXACT IUPAC:NAME [IUPAC] +synonym: "phenylalaninium" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33719 ! alpha-amino-acid cation -relationship: is_conjugate_acid_of CHEBI:28044 ! phenylalanine +relationship: RO:0018034 CHEBI:28044 ! is protonated form of phenylalanine [Term] id: CHEBI:32760 name: L-tyrosinate(1-) -def: "An optically active form of tyrosinate having L-configuration." [] -subset: 3_STAR -synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanoate" RELATED [IUPAC] -synonym: "hydrogen L-tyrosinate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-tyrosinate(1-)" EXACT [JCBN] -synonym: "L-tyrosine anion" RELATED [NIST_Chemistry_WebBook] -synonym: "L-tyrosine monoanion" RELATED [JCBN] -xref: Gmelin:329373 {source="Gmelin"} -xref: Reaxys:4784244 {source="Reaxys"} +def: "An optically active form of tyrosinate having L-configuration." [] +subset: 3:STAR +synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanoate" RELATED [iupac] +synonym: "hydrogen L-tyrosinate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen L-tyrosinate" RELATED IUPAC:NAME [iupac] +synonym: "L-tyrosinate(1-)" RELATED [jcbn] +synonym: "L-tyrosine anion" RELATED [nist] +synonym: "L-tyrosine monoanion" RELATED [jcbn] +xref: gmelin:329373 {source="gmelin"} +xref: reaxys:4784244 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32784 ! tyrosinate(1-) is_a: CHEBI:59814 ! L-alpha-amino acid anion -relationship: is_conjugate_acid_of CHEBI:32761 ! L-tyrosinate(2-) -relationship: is_conjugate_base_of CHEBI:17895 ! L-tyrosine -relationship: is_conjugate_base_of CHEBI:58315 ! L-tyrosine zwitterion -relationship: is_enantiomer_of CHEBI:32773 ! D-tyrosinate(1-) relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:17895 ! is deprotonated form of L-tyrosine +relationship: RO:0018033 CHEBI:58315 ! is deprotonated form of L-tyrosine zwitterion +relationship: RO:0018034 CHEBI:32761 ! is protonated form of L-tyrosinate(2-) +relationship: RO:0018039 CHEBI:32773 ! is enantiomer of D-tyrosinate(1-) [Term] id: CHEBI:32761 name: L-tyrosinate(2-) -def: "The L-enantiomer of tyrosinate(2-)." [] -subset: 3_STAR -synonym: "(2S)-2-amino-3-(4-oxidophenyl)propanoate" RELATED [IUPAC] -synonym: "L-tyrosinate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-tyrosinate(2-)" EXACT [JCBN] -synonym: "L-tyrosine dianion" RELATED [JCBN] -xref: Gmelin:364975 {source="Gmelin"} -xref: Reaxys:5339596 {source="Reaxys"} +def: "The L-enantiomer of tyrosinate(2−)." [] +subset: 3:STAR +synonym: "(2S)-2-amino-3-(4-oxidophenyl)propanoate" RELATED [iupac] +synonym: "L-tyrosinate" EXACT IUPAC:NAME [IUPAC] +synonym: "L-tyrosinate" RELATED IUPAC:NAME [iupac] +synonym: "L-tyrosinate(2-)" RELATED [jcbn] +synonym: "L-tyrosine dianion" RELATED [jcbn] +xref: gmelin:364975 {source="gmelin"} +xref: reaxys:5339596 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32785 ! tyrosinate(2-) -relationship: is_conjugate_base_of CHEBI:32760 ! L-tyrosinate(1-) -relationship: is_enantiomer_of CHEBI:32774 ! D-tyrosinate(2-) relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:32760 ! is deprotonated form of L-tyrosinate(1-) +relationship: RO:0018039 CHEBI:32774 ! is enantiomer of D-tyrosinate(2-) [Term] id: CHEBI:32762 name: L-tyrosinium -def: "An optically active form of tyrosinium having L-configuration." [] -subset: 3_STAR -synonym: "(1S)-1-carboxy-2-(4-hydroxyphenyl)ethanaminium" RELATED [IUPAC] -synonym: "L-tyrosine cation" RELATED [JCBN] -synonym: "L-tyrosinium" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:1150138 {source="Gmelin"} +def: "An optically active form of tyrosinium having L-configuration." [] +subset: 3:STAR +synonym: "(1S)-1-carboxy-2-(4-hydroxyphenyl)ethanaminium" RELATED [iupac] +synonym: "L-tyrosine cation" RELATED [jcbn] +synonym: "L-tyrosinium" EXACT IUPAC:NAME [IUPAC] +synonym: "L-tyrosinium" RELATED IUPAC:NAME [iupac] +xref: gmelin:1150138 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32786 ! tyrosinium -relationship: is_conjugate_acid_of CHEBI:17895 ! L-tyrosine -relationship: is_conjugate_acid_of CHEBI:58315 ! L-tyrosine zwitterion -relationship: is_enantiomer_of CHEBI:32775 ! D-tyrosinium relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018034 CHEBI:17895 ! is protonated form of L-tyrosine +relationship: RO:0018034 CHEBI:58315 ! is protonated form of L-tyrosine zwitterion +relationship: RO:0018039 CHEBI:32775 ! is enantiomer of D-tyrosinium [Term] id: CHEBI:32773 name: D-tyrosinate(1-) -def: "An optically active form of tyrosinate(1-) having D-configuration." [] -subset: 3_STAR -synonym: "(2R)-2-amino-3-(4-hydroxyphenyl)propanoate" RELATED [IUPAC] -synonym: "D-tyrosinate(1-)" EXACT [JCBN] -synonym: "D-tyrosine monoanion" RELATED [JCBN] -synonym: "hydrogen D-tyrosinate" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:1484464 {source="Gmelin"} +def: "An optically active form of tyrosinate(1−) having D-configuration." [] +subset: 3:STAR +synonym: "(2R)-2-amino-3-(4-hydroxyphenyl)propanoate" RELATED [iupac] +synonym: "D-tyrosinate(1-)" RELATED [jcbn] +synonym: "D-tyrosine monoanion" RELATED [jcbn] +synonym: "hydrogen D-tyrosinate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen D-tyrosinate" RELATED IUPAC:NAME [iupac] +xref: gmelin:1484464 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32784 ! tyrosinate(1-) -relationship: is_conjugate_acid_of CHEBI:32774 ! D-tyrosinate(2-) -relationship: is_conjugate_base_of CHEBI:28479 ! D-tyrosine -relationship: is_enantiomer_of CHEBI:32760 ! L-tyrosinate(1-) relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018033 CHEBI:28479 ! is deprotonated form of D-tyrosine +relationship: RO:0018034 CHEBI:32774 ! is protonated form of D-tyrosinate(2-) +relationship: RO:0018039 CHEBI:32760 ! is enantiomer of L-tyrosinate(1-) [Term] id: CHEBI:32774 name: D-tyrosinate(2-) -def: "The D-enantiomer of tyrosinate(2-)." [] -subset: 3_STAR -synonym: "(2R)-2-amino-3-(4-oxidophenyl)propanoate" RELATED [IUPAC] -synonym: "D-tyrosinate" EXACT IUPAC_NAME [IUPAC] -synonym: "D-tyrosinate(2-)" EXACT [JCBN] -synonym: "D-tyrosine dianion" RELATED [JCBN] +def: "The D-enantiomer of tyrosinate(2−)." [] +subset: 3:STAR +synonym: "(2R)-2-amino-3-(4-oxidophenyl)propanoate" RELATED [iupac] +synonym: "D-tyrosinate" EXACT IUPAC:NAME [IUPAC] +synonym: "D-tyrosinate" RELATED IUPAC:NAME [iupac] +synonym: "D-tyrosinate(2-)" RELATED [jcbn] +synonym: "D-tyrosine dianion" RELATED [jcbn] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32785 ! tyrosinate(2-) -relationship: is_conjugate_base_of CHEBI:32773 ! D-tyrosinate(1-) -relationship: is_enantiomer_of CHEBI:32761 ! L-tyrosinate(2-) relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018033 CHEBI:32773 ! is deprotonated form of D-tyrosinate(1-) +relationship: RO:0018039 CHEBI:32761 ! is enantiomer of L-tyrosinate(2-) [Term] id: CHEBI:32775 name: D-tyrosinium -def: "An optically active form of tyrosinium having D-configuration." [] -subset: 3_STAR -synonym: "(1R)-1-carboxy-2-(4-hydroxyphenyl)ethanaminium" RELATED [IUPAC] -synonym: "D-tyrosine cation" RELATED [JCBN] -synonym: "D-tyrosinium" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:364976 {source="Gmelin"} +def: "An optically active form of tyrosinium having D-configuration." [] +subset: 3:STAR +synonym: "(1R)-1-carboxy-2-(4-hydroxyphenyl)ethanaminium" RELATED [iupac] +synonym: "D-tyrosine cation" RELATED [jcbn] +synonym: "D-tyrosinium" EXACT IUPAC:NAME [IUPAC] +synonym: "D-tyrosinium" RELATED IUPAC:NAME [iupac] +xref: gmelin:364976 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:32786 ! tyrosinium -relationship: is_conjugate_acid_of CHEBI:28479 ! D-tyrosine -relationship: is_enantiomer_of CHEBI:32762 ! L-tyrosinium relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:28479 ! is protonated form of D-tyrosine +relationship: RO:0018039 CHEBI:32762 ! is enantiomer of L-tyrosinium [Term] id: CHEBI:32784 name: tyrosinate(1-) -def: "An alpha-amino-acid anion that is the conjugate base of tyrosine, arising from deprotonation of the carboxy group." [] -subset: 3_STAR -synonym: "2-amino-3-(4-hydroxyphenyl)propanoate" RELATED [IUPAC] -synonym: "hydrogen tyrosinate" EXACT IUPAC_NAME [IUPAC] -synonym: "tyrosinate(1-)" EXACT [JCBN] -synonym: "tyrosine anion" RELATED [JCBN] -xref: Beilstein:3548387 {source="Beilstein"} -xref: Beilstein:4139515 {source="Beilstein"} -xref: Gmelin:329372 {source="Gmelin"} +def: "An α-amino-acid anion that is the conjugate base of tyrosine, arising from deprotonation of the carboxy group." [] +subset: 3:STAR +synonym: "2-amino-3-(4-hydroxyphenyl)propanoate" RELATED [iupac] +synonym: "hydrogen tyrosinate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen tyrosinate" RELATED IUPAC:NAME [iupac] +synonym: "tyrosinate(1-)" RELATED [jcbn] +synonym: "tyrosine anion" RELATED [jcbn] +xref: beilstein:3548387 {source="beilstein"} +xref: beilstein:4139515 {source="beilstein"} +xref: gmelin:329372 {source="gmelin"} is_a: CHEBI:33558 ! alpha-amino-acid anion -relationship: is_conjugate_acid_of CHEBI:32785 ! tyrosinate(2-) -relationship: is_conjugate_base_of CHEBI:18186 ! tyrosine +relationship: RO:0018033 CHEBI:18186 ! is deprotonated form of tyrosine +relationship: RO:0018034 CHEBI:32785 ! is protonated form of tyrosinate(2-) [Term] id: CHEBI:32785 name: tyrosinate(2-) -subset: 3_STAR -synonym: "2-amino-3-(4-oxidophenyl)propanoate" RELATED [IUPAC] -synonym: "tyrosinate" EXACT IUPAC_NAME [IUPAC] -synonym: "tyrosinate(2-)" EXACT [JCBN] -synonym: "tyrosine dianion" RELATED [JCBN] +subset: 3:STAR +synonym: "2-amino-3-(4-oxidophenyl)propanoate" RELATED [iupac] +synonym: "tyrosinate" EXACT IUPAC:NAME [IUPAC] +synonym: "tyrosinate" RELATED IUPAC:NAME [iupac] +synonym: "tyrosinate(2-)" RELATED [jcbn] +synonym: "tyrosine dianion" RELATED [jcbn] is_a: CHEBI:33558 ! alpha-amino-acid anion -relationship: is_conjugate_base_of CHEBI:32784 ! tyrosinate(1-) +relationship: RO:0018033 CHEBI:32784 ! is deprotonated form of tyrosinate(1-) [Term] id: CHEBI:32786 name: tyrosinium -def: "An alpha-amino-acid cation that is the conjugate acid of tyrosine, arising from protonation of the amino group." [] -subset: 3_STAR -synonym: "1-carboxy-2-(4-hydroxyphenyl)ethanaminium" RELATED [IUPAC] -synonym: "tyrosine cation" RELATED [JCBN] -synonym: "tyrosinium" EXACT IUPAC_NAME [IUPAC] +def: "An α-amino-acid cation that is the conjugate acid of tyrosine, arising from protonation of the amino group." [] +subset: 3:STAR +synonym: "1-carboxy-2-(4-hydroxyphenyl)ethanaminium" RELATED [iupac] +synonym: "tyrosine cation" RELATED [jcbn] +synonym: "tyrosinium" EXACT IUPAC:NAME [IUPAC] +synonym: "tyrosinium" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33719 ! alpha-amino-acid cation -relationship: is_conjugate_acid_of CHEBI:18186 ! tyrosine +relationship: RO:0018034 CHEBI:18186 ! is protonated form of tyrosine [Term] id: CHEBI:32789 name: tyrosine residue -subset: 3_STAR -synonym: "tyrosine acid residue" RELATED [JCBN] -synonym: "tyrosine residue" EXACT [JCBN] -synonym: "tyrosyl" RELATED [ChEBI] +subset: 3:STAR +synonym: "tyrosine acid residue" RELATED [jcbn] +synonym: "tyrosine residue" RELATED [jcbn] +synonym: "tyrosyl" RELATED [chebi] is_a: CHEBI:33710 ! alpha-amino-acid residue -relationship: is_substituent_group_from CHEBI:18186 ! tyrosine +relationship: RO:0018037 CHEBI:18186 ! is substitutent group from tyrosine [Term] id: CHEBI:32952 @@ -6859,12 +7205,13 @@ alt_id: CHEBI:13814 alt_id: CHEBI:22474 alt_id: CHEBI:2641 def: "A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups." [] -subset: 3_STAR -synonym: "Amin" RELATED [ChEBI] -synonym: "Amine" EXACT [KEGG_COMPOUND] -synonym: "amines" EXACT IUPAC_NAME [IUPAC] -synonym: "Substituted amine" RELATED [KEGG_COMPOUND] -xref: KEGG:C00706 +subset: 3:STAR +synonym: "Amin" RELATED [chebi] +synonym: "Amine" RELATED [kegg.compound] +synonym: "amines" EXACT IUPAC:NAME [IUPAC] +synonym: "amines" RELATED IUPAC:NAME [iupac] +synonym: "Substituted amine" RELATED [kegg.compound] +xref: kegg.compound:C00706 {source="kegg.compound"} is_a: CHEBI:50047 ! organic amino compound [Term] @@ -6872,36 +7219,39 @@ id: CHEBI:32988 name: amide alt_id: CHEBI:22473 alt_id: CHEBI:2633 -def: "An amide is a derivative of an oxoacid RkE(=O)l(OH)m (l =/= 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [] -subset: 3_STAR +def: "An amide is a derivative of an oxoacid RkE(=O)l(OH)m (l ≠ 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [] +subset: 3:STAR synonym: "Amide" EXACT [KEGG_COMPOUND] -synonym: "amides" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C00241 +synonym: "Amide" RELATED [kegg.compound] +synonym: "amides" EXACT IUPAC:NAME [IUPAC] +synonym: "amides" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C00241 {source="kegg.compound"} is_a: CHEBI:51143 ! nitrogen molecular entity [Term] id: CHEBI:3306 name: calcitonin def: "A 32-membered heterodetic cyclic peptide comprising the sequence Cys-Ser-Asn-Leu-Ser-Thr-Cys-Val-Leu-Gly-Lys-Leu-Ser-Gln-Glu-Leu-His-Lys-Leu-Gln-Thr-Tyr-Pro-Arg-Thr-Asn-Thr-Gly-Ser-Gly-Thr-Pro-NH2 cyclised by a disulfide bridge between the two Cys residues at positions 1 and 7." [] -subset: 3_STAR -synonym: "Calcitonin" EXACT [KEGG_COMPOUND] -synonym: "calcitonin" RELATED INN [ChemIDplus] -synonym: "Calcitonin, salmon" RELATED [KEGG_COMPOUND] -synonym: "Cibacalcin" RELATED [KEGG_COMPOUND] -synonym: "cyclo-[Cys-Ser-Asn-Leu-Ser-Thr-Cys]-Val-Leu-Gly-Lys-Leu-Ser-Gln-Glu-Leu-His-Lys-Leu-Gln-Thr-Tyr-Pro-Arg-Thr-Asn-Thr-Gly-Ser-Gly-Thr-Pro-NH2" RELATED [ChEBI] -synonym: "N-{[(4R,7S,10S,13S,16S,19S,22R)-22-amino-16-(2-amino-2-oxoethyl)-7-[(1R)-1-hydroxyethyl]-10,19-bis(hydroxymethyl)-13-isobutyl-6,9,12,15,18,21-hexaoxo-1,2-dithia-5,8,11,14,17,20-hexaazacyclotricosan-4-yl]carbonyl}-L-valyl-L-leucylglycyl-L-lysyl-L-leucyl-L-seryl-L-glutaminyl-L-alpha-glutamyl-L-leucyl-L-histidyl-L-lysyl-L-leucyl-L-glutaminyl-L-threonyl-L-tyrosyl-L-prolyl-L-arginyl-L-threonyl-L-asparaginyl-L-threonylglycyl-L-serylglycyl-L-threonyl-L-prolinamide" EXACT IUPAC_NAME [IUPAC] -synonym: "Salmon calcitonin" RELATED [ChemIDplus] -synonym: "Salmon calcitonin-(1-32)" RELATED [ChemIDplus] -synonym: "Salmotonin" RELATED [DrugBank] -synonym: "Thyrocalcitonin (salmon)" RELATED [ChemIDplus] -xref: CAS:47931-85-1 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: CAS:9007-12-9 {source="KEGG COMPOUND"} -xref: Drug_Central:2989 {source="DrugCentral"} -xref: DrugBank:DB00017 -xref: KEGG:C06865 -xref: KEGG:D00249 -xref: Reaxys:8186880 {source="Reaxys"} -xref: Wikipedia:Calcitonin +subset: 3:STAR +synonym: "Calcitonin" RELATED [kegg.compound] +synonym: "calcitonin" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Calcitonin, salmon" RELATED [kegg.compound] +synonym: "Cibacalcin" RELATED [kegg.compound] +synonym: "cyclo-[Cys-Ser-Asn-Leu-Ser-Thr-Cys]-Val-Leu-Gly-Lys-Leu-Ser-Gln-Glu-Leu-His-Lys-Leu-Gln-Thr-Tyr-Pro-Arg-Thr-Asn-Thr-Gly-Ser-Gly-Thr-Pro-NH2" RELATED [chebi] +synonym: "N-{[(4R,7S,10S,13S,16S,19S,22R)-22-amino-16-(2-amino-2-oxoethyl)-7-[(1R)-1-hydroxyethyl]-10,19-bis(hydroxymethyl)-13-isobutyl-6,9,12,15,18,21-hexaoxo-1,2-dithia-5,8,11,14,17,20-hexaazacyclotricosan-4-yl]carbonyl}-L-valyl-L-leucylglycyl-L-lysyl-L-leucyl-L-seryl-L-glutaminyl-L-alpha-glutamyl-L-leucyl-L-histidyl-L-lysyl-L-leucyl-L-glutaminyl-L-threonyl-L-tyrosyl-L-prolyl-L-arginyl-L-threonyl-L-asparaginyl-L-threonylglycyl-L-serylglycyl-L-threonyl-L-prolinamide" EXACT IUPAC:NAME [IUPAC] +synonym: "N-{[(4R,7S,10S,13S,16S,19S,22R)-22-amino-16-(2-amino-2-oxoethyl)-7-[(1R)-1-hydroxyethyl]-10,19-bis(hydroxymethyl)-13-isobutyl-6,9,12,15,18,21-hexaoxo-1,2-dithia-5,8,11,14,17,20-hexaazacyclotricosan-4-yl]carbonyl}-L-valyl-L-leucylglycyl-L-lysyl-L-leucyl-L-seryl-L-glutaminyl-L-alpha-glutamyl-L-leucyl-L-histidyl-L-lysyl-L-leucyl-L-glutaminyl-L-threonyl-L-tyrosyl-L-prolyl-L-arginyl-L-threonyl-L-asparaginyl-L-threonylglycyl-L-serylglycyl-L-threonyl-L-prolinamide" RELATED IUPAC:NAME [iupac] +synonym: "Salmon calcitonin" RELATED [chemidplus] +synonym: "Salmon calcitonin-(1-32)" RELATED [chemidplus] +synonym: "Salmotonin" RELATED [drugbank] +synonym: "Thyrocalcitonin (salmon)" RELATED [chemidplus] +xref: cas:47931-85-1 {source="cas"} +xref: cas:9007-12-9 {source="cas"} +xref: drugbank:DB00017 {source="drugbank"} +xref: drugcentral:2989 {source="drugcentral"} +xref: kegg.compound:C06865 {source="kegg.compound"} +xref: kegg.drug:D00249 {source="kegg.drug"} +xref: reaxys:8186880 {source="reaxys"} +xref: wikipedia.en:Calcitonin {source="wikipedia.en"} is_a: CHEBI:15841 ! polypeptide is_a: CHEBI:24533 ! heterodetic cyclic peptide is_a: CHEBI:25905 ! peptide hormone @@ -6911,29 +7261,31 @@ relationship: RO:0000087 CHEBI:50646 ! has role bone density conservation agent [Term] id: CHEBI:3311 name: calcium carbonate -def: "A calcium salt with formula CCaO3." [] -subset: 3_STAR -synonym: "CaCO3" RELATED [IUPAC] -synonym: "Calcium carbonate" EXACT [KEGG_COMPOUND] -synonym: "calcium carbonate" EXACT IUPAC_NAME [IUPAC] -synonym: "calcium carbonate (1:1)" RELATED [ChemIDplus] -synonym: "calcium trioxidocarbonate" EXACT IUPAC_NAME [IUPAC] -synonym: "Calciumcarbonat" RELATED [ChEBI] -synonym: "carbonate de calcium" RELATED [ChEBI] -synonym: "carbonato de calcio" RELATED [ChEBI] -synonym: "carbonic acid calcium salt (1:1)" RELATED [ChemIDplus] -synonym: "E 170" RELATED [ChEBI] -synonym: "Kalziumkarbonat" RELATED [ChEBI] -synonym: "kohlensaurer Kalk" RELATED [ChEBI] -synonym: "Precipitated calcium carbonate" RELATED [KEGG_COMPOUND] -xref: BPDB:108 -xref: CAS:471-34-1 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: DrugBank:DB06724 -xref: KEGG:C08129 -xref: KEGG:D00932 -xref: PPDB:108 -xref: Reaxys:8008338 {source="Reaxys"} -xref: Wikipedia:Calcium_carbonate +def: "A calcium salt with formula CCaO3." [] +subset: 3:STAR +synonym: "CaCO3" RELATED [iupac] +synonym: "Calcium carbonate" RELATED [kegg.compound] +synonym: "calcium carbonate" EXACT IUPAC:NAME [IUPAC] +synonym: "calcium carbonate" RELATED IUPAC:NAME [iupac] +synonym: "calcium carbonate (1:1)" RELATED [chemidplus] +synonym: "calcium trioxidocarbonate" EXACT IUPAC:NAME [IUPAC] +synonym: "calcium trioxidocarbonate" RELATED IUPAC:NAME [iupac] +synonym: "Calciumcarbonat" RELATED [chebi] +synonym: "carbonate de calcium" RELATED [chebi] +synonym: "carbonato de calcio" RELATED [chebi] +synonym: "carbonic acid calcium salt (1:1)" RELATED [chemidplus] +synonym: "E 170" RELATED [chebi] +synonym: "Kalziumkarbonat" RELATED [chebi] +synonym: "kohlensaurer Kalk" RELATED [chebi] +synonym: "Precipitated calcium carbonate" RELATED [kegg.compound] +xref: bpdb:108 {source="bpdb"} +xref: cas:471-34-1 {source="cas"} +xref: drugbank:DB06724 {source="drugbank"} +xref: kegg.compound:C08129 {source="kegg.compound"} +xref: kegg.drug:D00932 {source="kegg.drug"} +xref: ppdb:108 {source="ppdb"} +xref: reaxys:8008338 {source="reaxys"} +xref: wikipedia.en:Calcium_carbonate {source="wikipedia.en"} is_a: CHEBI:190295 ! inorganic calcium salt is_a: CHEBI:35156 ! calcium salt is_a: CHEBI:46721 ! carbonate salt @@ -6947,40 +7299,41 @@ relationship: RO:0000087 CHEBI:77960 ! has role food firming agent id: CHEBI:33232 name: application def: "Intended use of the molecular entity or part thereof by humans." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:50906 ! role [Term] id: CHEBI:33233 name: fundamental particle def: "A particle not known to have substructure." [] -subset: 3_STAR -synonym: "elementary particle" EXACT IUPAC_NAME [IUPAC] -synonym: "elementary particles" RELATED [ChEBI] +subset: 3:STAR +synonym: "elementary particle" EXACT IUPAC:NAME [IUPAC] +synonym: "elementary particle" RELATED IUPAC:NAME [iupac] +synonym: "elementary particles" RELATED [chebi] is_a: CHEBI:36342 ! subatomic particle [Term] id: CHEBI:33238 name: monoatomic entity def: "A monoatomic entity is a molecular entity consisting of a single atom." [] -subset: 3_STAR -synonym: "atomic entity" RELATED [ChEBI] -synonym: "monoatomic entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "atomic entity" RELATED [chebi] +synonym: "monoatomic entities" RELATED [chebi] is_a: CHEBI:33259 ! elemental molecular entity [Term] id: CHEBI:33241 name: oxoacid derivative -subset: 3_STAR -synonym: "oxoacid derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxoacid derivatives" RELATED [chebi] is_a: CHEBI:37577 ! heteroatomic molecular entity -relationship: has_functional_parent CHEBI:24833 ! oxoacid +relationship: RO:0018038 CHEBI:24833 ! has functional parent oxoacid [Term] id: CHEBI:33242 name: inorganic hydride -subset: 3_STAR -synonym: "inorganic hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic hydrides" RELATED [chebi] is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:33692 ! hydrides @@ -6988,9 +7341,9 @@ is_a: CHEBI:33692 ! hydrides id: CHEBI:33245 name: organic fundamental parent def: "An organic fundamental parent is a structure used as a basis for substitutive names in organic nomenclature, containing, in addition to one or more hydrogen atoms, a single atom of an element, a number of atoms (alike or different) linked together to form an unbranched chain, a monocyclic or polycyclic ring system, or a ring assembly or ring/chain system." [] -subset: 3_STAR -synonym: "organic fundamental parents" RELATED [ChEBI] -synonym: "organic parent hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic fundamental parents" RELATED [chebi] +synonym: "organic parent hydrides" RELATED [chebi] is_a: CHEBI:37175 ! organic hydride is_a: CHEBI:50860 ! organic molecular entity @@ -6998,30 +7351,32 @@ is_a: CHEBI:50860 ! organic molecular entity id: CHEBI:33246 name: inorganic group def: "Any substituent group which does not contain carbon." [] -subset: 3_STAR -synonym: "inorganic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic groups" RELATED [chebi] is_a: CHEBI:24433 ! group [Term] id: CHEBI:33247 name: organic group def: "Any substituent group or skeleton containing carbon." [] -subset: 3_STAR -synonym: "organic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic groups" RELATED [chebi] is_a: CHEBI:24433 ! group -relationship: is_conjugate_acid_of CHEBI:64775 ! organic anionic group -relationship: is_conjugate_base_of CHEBI:64769 ! organic cationic group +relationship: RO:0018033 CHEBI:64769 ! is deprotonated form of organic cationic group +relationship: RO:0018034 CHEBI:64775 ! is protonated form of organic anionic group [Term] id: CHEBI:33249 name: organyl group def: "Any organic substituent group, regardless of functional type, having one free valence at a carbon atom." [] -subset: 3_STAR -synonym: "groupe organyle" RELATED [IUPAC] -synonym: "grupo organilo" RELATED [IUPAC] -synonym: "grupos organilo" RELATED [IUPAC] -synonym: "organyl group" EXACT IUPAC_NAME [IUPAC] -synonym: "organyl groups" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "groupe organyle" RELATED [iupac] +synonym: "grupo organilo" RELATED [iupac] +synonym: "grupos organilo" RELATED [iupac] +synonym: "organyl group" EXACT IUPAC:NAME [IUPAC] +synonym: "organyl group" RELATED IUPAC:NAME [iupac] +synonym: "organyl groups" EXACT IUPAC:NAME [IUPAC] +synonym: "organyl groups" RELATED IUPAC:NAME [iupac] is_a: CHEBI:51447 ! organic univalent group [Term] @@ -7030,14 +7385,15 @@ name: atom alt_id: CHEBI:22671 alt_id: CHEBI:23907 def: "A chemical entity constituting the smallest component of an element having the chemical properties of the element." [] -subset: 3_STAR -synonym: "atom" EXACT IUPAC_NAME [IUPAC] -synonym: "atome" RELATED [IUPAC] -synonym: "atomo" RELATED [IUPAC] -synonym: "atoms" RELATED [ChEBI] -synonym: "atomus" RELATED [ChEBI] -synonym: "element" RELATED [ChEBI] -synonym: "elements" RELATED [ChEBI] +subset: 3:STAR +synonym: "atom" EXACT IUPAC:NAME [IUPAC] +synonym: "atom" RELATED IUPAC:NAME [iupac] +synonym: "atome" RELATED [iupac] +synonym: "atomo" RELATED [iupac] +synonym: "atoms" RELATED [chebi] +synonym: "atomus" RELATED [chebi] +synonym: "element" RELATED [chebi] +synonym: "elements" RELATED [chebi] is_a: CHEBI:24431 ! chemical entity relationship: has_part CHEBI:10545 ! electron relationship: has_part CHEBI:33252 ! atomic nucleus @@ -7045,8 +7401,8 @@ relationship: has_part CHEBI:33252 ! atomic nucleus [Term] id: CHEBI:33251 name: monoatomic hydrogen -subset: 3_STAR -synonym: "atomic hydrogen" RELATED [ChEBI] +subset: 3:STAR +synonym: "atomic hydrogen" RELATED [chebi] is_a: CHEBI:33238 ! monoatomic entity is_a: CHEBI:33260 ! elemental hydrogen @@ -7054,54 +7410,60 @@ is_a: CHEBI:33260 ! elemental hydrogen id: CHEBI:33252 name: atomic nucleus def: "A nucleus is the positively charged central portion of an atom, excluding the orbital electrons." [] -subset: 3_STAR -synonym: "Atomkern" RELATED [ChEBI] -synonym: "Kern" RELATED [ChEBI] -synonym: "noyau" RELATED [IUPAC] -synonym: "noyau atomique" RELATED [ChEBI] -synonym: "nuclei" RELATED [ChEBI] -synonym: "nucleo" RELATED [IUPAC] -synonym: "nucleo atomico" RELATED [ChEBI] -synonym: "nucleus" EXACT IUPAC_NAME [IUPAC] -synonym: "nucleus atomi" RELATED [ChEBI] +subset: 3:STAR +synonym: "Atomkern" RELATED [chebi] +synonym: "Kern" RELATED [chebi] +synonym: "noyau" RELATED [iupac] +synonym: "noyau atomique" RELATED [chebi] +synonym: "nuclei" RELATED [chebi] +synonym: "nucleo" RELATED [iupac] +synonym: "nucleo atomico" RELATED [chebi] +synonym: "nucleus" EXACT IUPAC:NAME [IUPAC] +synonym: "nucleus" RELATED IUPAC:NAME [iupac] +synonym: "nucleus atomi" RELATED [chebi] is_a: CHEBI:36347 ! nuclear particle +relationship: has_part CHEBI:24636 ! proton relationship: has_part CHEBI:33253 ! nucleon +property_value: editor_note "Some people may be uncomfortable calling every proton an atomic nucleus" xsd:string +property_value: editor_note "This is equivalent to CHEBI:33252" xsd:string [Term] id: CHEBI:33253 name: nucleon def: "Heavy nuclear particle: proton or neutron." [] -subset: 3_STAR -synonym: "nucleon" EXACT IUPAC_NAME [IUPAC] -synonym: "nucleons" RELATED [ChEBI] -synonym: "Nukleon" RELATED [ChEBI] -synonym: "Nukleonen" RELATED [ChEBI] +subset: 3:STAR +synonym: "nucleon" EXACT IUPAC:NAME [IUPAC] +synonym: "nucleon" RELATED IUPAC:NAME [iupac] +synonym: "nucleons" RELATED [chebi] +synonym: "Nukleon" RELATED [chebi] +synonym: "Nukleonen" RELATED [chebi] is_a: CHEBI:36339 ! baryon is_a: CHEBI:36347 ! nuclear particle [Term] id: CHEBI:33256 name: primary amide -def: "A derivative of an oxoacid RkE(=O)l(OH)m (l =/= 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [] -subset: 3_STAR -synonym: "primary amide" EXACT [IUPAC] -synonym: "primary amides" EXACT IUPAC_NAME [IUPAC] +def: "A derivative of an oxoacid RkE(=O)l(OH)m (l ≠ 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [] +subset: 3:STAR +synonym: "primary amide" RELATED [iupac] +synonym: "primary amides" EXACT IUPAC:NAME [IUPAC] +synonym: "primary amides" RELATED IUPAC:NAME [iupac] is_a: CHEBI:32988 ! amide [Term] id: CHEBI:33259 name: elemental molecular entity def: "A molecular entity all atoms of which have the same atomic number." [] -subset: 3_STAR -synonym: "homoatomic entity" RELATED [ChEBI] -synonym: "homoatomic molecular entities" RELATED [ChEBI] -synonym: "homoatomic molecular entity" RELATED [ChEBI] +subset: 3:STAR +synonym: "homoatomic entity" RELATED [chebi] +synonym: "homoatomic molecular entities" RELATED [chebi] +synonym: "homoatomic molecular entity" RELATED [chebi] is_a: CHEBI:23367 ! molecular entity [Term] id: CHEBI:33260 name: elemental hydrogen -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:33259 ! elemental molecular entity is_a: CHEBI:33608 ! hydrogen molecular entity @@ -7109,7 +7471,7 @@ is_a: CHEBI:33608 ! hydrogen molecular entity [Term] id: CHEBI:33262 name: elemental oxygen -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:25806 ! oxygen molecular entity is_a: CHEBI:33259 ! elemental molecular entity @@ -7117,23 +7479,23 @@ is_a: CHEBI:33259 ! elemental molecular entity [Term] id: CHEBI:33263 name: diatomic oxygen -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:33262 ! elemental oxygen [Term] id: CHEBI:33273 name: polyatomic anion def: "An anion consisting of more than one atom." [] -subset: 3_STAR -synonym: "polyatomic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "polyatomic anions" RELATED [chebi] is_a: CHEBI:22563 ! anion is_a: CHEBI:36358 ! polyatomic ion [Term] id: CHEBI:33280 name: molecular messenger -subset: 3_STAR -synonym: "chemical messenger" RELATED [ChEBI] +subset: 3:STAR +synonym: "chemical messenger" RELATED [chebi] is_a: CHEBI:24432 ! biological role [Term] @@ -7141,85 +7503,85 @@ id: CHEBI:33281 name: antimicrobial agent alt_id: CHEBI:22582 def: "A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans." [] -subset: 3_STAR -synonym: "antibiotic" RELATED [ChEBI] -synonym: "antibiotics" RELATED [ChEBI] -synonym: "Antibiotika" RELATED [ChEBI] -synonym: "Antibiotikum" RELATED [ChEBI] -synonym: "antibiotique" RELATED [IUPAC] -synonym: "antimicrobial" RELATED [ChEBI] -synonym: "antimicrobial agents" RELATED [ChEBI] -synonym: "antimicrobials" RELATED [ChEBI] -synonym: "microbicide" RELATED [ChEBI] -synonym: "microbicides" RELATED [ChEBI] -xref: PMID:12964249 {source="Europe PMC"} -xref: PMID:22117953 {source="Europe PMC"} -xref: PMID:22439833 {source="Europe PMC"} -xref: PMID:22849268 {source="Europe PMC"} -xref: PMID:22849276 {source="Europe PMC"} -xref: PMID:22958833 {source="Europe PMC"} +subset: 3:STAR +synonym: "antibiotic" RELATED [chebi] +synonym: "antibiotics" RELATED [chebi] +synonym: "Antibiotika" RELATED [chebi] +synonym: "Antibiotikum" RELATED [chebi] +synonym: "antibiotique" RELATED [iupac] +synonym: "antimicrobial" RELATED [chebi] +synonym: "antimicrobial agents" RELATED [chebi] +synonym: "antimicrobials" RELATED [chebi] +synonym: "microbicide" RELATED [chebi] +synonym: "microbicides" RELATED [chebi] +xref: pubmed:12964249 {source="pubmed"} +xref: pubmed:22117953 {source="pubmed"} +xref: pubmed:22439833 {source="pubmed"} +xref: pubmed:22849268 {source="pubmed"} +xref: pubmed:22849276 {source="pubmed"} +xref: pubmed:22958833 {source="pubmed"} is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:33282 name: antibacterial agent def: "A substance (or active part thereof) that kills or slows the growth of bacteria." [] -subset: 3_STAR -synonym: "antibacterial agents" RELATED [ChEBI] -synonym: "antibacterials" RELATED [ChEBI] -synonym: "bactericide" RELATED [ChEBI] -synonym: "bactericides" RELATED [ChEBI] +subset: 3:STAR +synonym: "antibacterial agents" RELATED [chebi] +synonym: "antibacterials" RELATED [chebi] +synonym: "bactericide" RELATED [chebi] +synonym: "bactericides" RELATED [chebi] is_a: CHEBI:33281 ! antimicrobial agent [Term] id: CHEBI:33284 name: nutrient def: "A nutrient is a food component that an organism uses to survive and grow." [] -subset: 3_STAR -synonym: "nutrients" RELATED [ChEBI] +subset: 3:STAR +synonym: "nutrients" RELATED [chebi] is_a: CHEBI:78295 ! food component [Term] id: CHEBI:33285 name: heteroorganic entity def: "A heteroorganic entity is an organic molecular entity in which carbon atoms or organic groups are bonded directly to one or more heteroatoms." [] -subset: 3_STAR -synonym: "heteroorganic entities" RELATED [ChEBI] -synonym: "organoelement compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "heteroorganic entities" RELATED [chebi] +synonym: "organoelement compounds" RELATED [chebi] is_a: CHEBI:50860 ! organic molecular entity [Term] id: CHEBI:33286 name: agrochemical def: "An agrochemical is a substance that is used in agriculture or horticulture." [] -subset: 3_STAR -synonym: "agrichemical" RELATED [ChEBI] -synonym: "agrichemicals" RELATED [ChEBI] -synonym: "agricultural chemicals" RELATED [ChEBI] -synonym: "agrochemicals" RELATED [ChEBI] -xref: Wikipedia:Agrochemical +subset: 3:STAR +synonym: "agrichemical" RELATED [chebi] +synonym: "agrichemicals" RELATED [chebi] +synonym: "agricultural chemicals" RELATED [chebi] +synonym: "agrochemicals" RELATED [chebi] +xref: wikipedia.en:Agrochemical {source="wikipedia.en"} is_a: CHEBI:33232 ! application [Term] id: CHEBI:33287 name: fertilizer def: "A fertilizer is any substance that is added to soil or water to assist the growth of plants." [] -subset: 3_STAR -synonym: "fertiliser" RELATED [ChEBI] -synonym: "fertilizers" RELATED [ChEBI] +subset: 3:STAR +synonym: "fertiliser" RELATED [chebi] +synonym: "fertilizers" RELATED [chebi] is_a: CHEBI:33286 ! agrochemical [Term] id: CHEBI:33290 name: food def: "A physiological role played by any substance of either plant, animal or artificial origin which contains essential body nutrients that can be ingested by an organism to provide energy, promote growth, and maintain the processes of life." [] -subset: 3_STAR -synonym: "food material" RELATED [ChEBI] -synonym: "food materials" RELATED [ChEBI] -synonym: "food role" RELATED [ChEBI] -synonym: "foods" RELATED [ChEBI] -synonym: "foodstuff" RELATED [ChEBI] -synonym: "foodstuffs" RELATED [ChEBI] +subset: 3:STAR +synonym: "food material" RELATED [chebi] +synonym: "food materials" RELATED [chebi] +synonym: "food role" RELATED [chebi] +synonym: "foods" RELATED [chebi] +synonym: "foodstuff" RELATED [chebi] +synonym: "foodstuffs" RELATED [chebi] is_a: CHEBI:52211 ! physiological role relationship: has_part CHEBI:78295 ! food component @@ -7227,16 +7589,16 @@ relationship: has_part CHEBI:78295 ! food component id: CHEBI:33295 name: diagnostic agent def: "A substance administered to aid diagnosis of a disease." [] -subset: 3_STAR -synonym: "diagnostic aid" RELATED [ChEBI] +subset: 3:STAR +synonym: "diagnostic aid" RELATED [chebi] is_a: CHEBI:52217 ! pharmaceutical [Term] id: CHEBI:33296 name: alkali metal molecular entity def: "A molecular entity containing one or more atoms of an alkali metal." [] -subset: 3_STAR -synonym: "alkali metal molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkali metal molecular entities" RELATED [chebi] is_a: CHEBI:33674 ! s-block molecular entity relationship: has_part CHEBI:22314 ! alkali metal atom @@ -7244,11 +7606,11 @@ relationship: has_part CHEBI:22314 ! alkali metal atom id: CHEBI:33299 name: alkaline earth molecular entity def: "An alkaline earth molecular entity is a molecular entity containing one or more atoms of an alkaline earth metal." [] -subset: 3_STAR -synonym: "alkaline earth compounds" RELATED [ChEBI] -synonym: "alkaline earth molecular entities" RELATED [ChEBI] -synonym: "alkaline earth molecular entity" EXACT [ChEBI] -synonym: "alkaline-earth compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkaline earth compounds" RELATED [chebi] +synonym: "alkaline earth molecular entities" RELATED [chebi] +synonym: "alkaline earth molecular entity" RELATED [chebi] +synonym: "alkaline-earth compounds" RELATED [chebi] is_a: CHEBI:33674 ! s-block molecular entity relationship: has_part CHEBI:22313 ! alkaline earth metal atom @@ -7256,23 +7618,24 @@ relationship: has_part CHEBI:22313 ! alkaline earth metal atom id: CHEBI:33300 name: pnictogen def: "Any p-block element atom that is in group 15 of the periodic table: nitrogen, phosphorus, arsenic, antimony and bismuth." [] -subset: 3_STAR -synonym: "group 15 elements" RELATED [ChEBI] -synonym: "group V elements" RELATED [ChEBI] -synonym: "nitrogenoideos" RELATED [ChEBI] -synonym: "nitrogenoides" RELATED [ChEBI] -synonym: "pnictogene" RELATED [ChEBI] -synonym: "pnictogenes" RELATED [ChEBI] -synonym: "pnictogens" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "group 15 elements" RELATED [chebi] +synonym: "group V elements" RELATED [chebi] +synonym: "nitrogenoideos" RELATED [chebi] +synonym: "nitrogenoides" RELATED [chebi] +synonym: "pnictogene" RELATED [chebi] +synonym: "pnictogenes" RELATED [chebi] +synonym: "pnictogens" EXACT IUPAC:NAME [IUPAC] +synonym: "pnictogens" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33560 ! p-block element atom [Term] id: CHEBI:33302 name: pnictogen molecular entity def: "A p-block molecular entity containing any pnictogen." [] -subset: 3_STAR -synonym: "pnictogen molecular entities" RELATED [ChEBI] -synonym: "pnictogen molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "pnictogen molecular entities" RELATED [chebi] +synonym: "pnictogen molecular entity" RELATED [chebi] is_a: CHEBI:33675 ! p-block molecular entity relationship: has_part CHEBI:33300 ! pnictogen @@ -7280,44 +7643,47 @@ relationship: has_part CHEBI:33300 ! pnictogen id: CHEBI:33303 name: chalcogen def: "Any p-block element belonging to the group 16 family of the periodic table." [] -subset: 3_STAR -synonym: "anfigeno" RELATED [ChEBI] -synonym: "anfigenos" RELATED [ChEBI] -synonym: "calcogeno" RELATED [ChEBI] -synonym: "calcogenos" RELATED [ChEBI] -synonym: "chalcogen" EXACT IUPAC_NAME [IUPAC] -synonym: "chalcogene" RELATED [ChEBI] -synonym: "chalcogenes" RELATED [ChEBI] -synonym: "chalcogens" EXACT IUPAC_NAME [IUPAC] -synonym: "Chalkogen" RELATED [ChEBI] -synonym: "Chalkogene" RELATED [ChEBI] -synonym: "group 16 elements" RELATED [ChEBI] -synonym: "group VI elements" RELATED [ChEBI] -xref: PMID:17084588 {source="Europe PMC"} +subset: 3:STAR +synonym: "anfigeno" RELATED [chebi] +synonym: "anfigenos" RELATED [chebi] +synonym: "calcogeno" RELATED [chebi] +synonym: "calcogenos" RELATED [chebi] +synonym: "chalcogen" EXACT IUPAC:NAME [IUPAC] +synonym: "chalcogen" RELATED IUPAC:NAME [iupac] +synonym: "chalcogene" RELATED [chebi] +synonym: "chalcogenes" RELATED [chebi] +synonym: "chalcogens" EXACT IUPAC:NAME [IUPAC] +synonym: "chalcogens" RELATED IUPAC:NAME [iupac] +synonym: "Chalkogen" RELATED [chebi] +synonym: "Chalkogene" RELATED [chebi] +synonym: "group 16 elements" RELATED [chebi] +synonym: "group VI elements" RELATED [chebi] +xref: pubmed:17084588 {source="pubmed"} is_a: CHEBI:33560 ! p-block element atom [Term] id: CHEBI:33304 name: chalcogen molecular entity def: "Any p-block molecular entity containing a chalcogen." [] -subset: 3_STAR -synonym: "chalcogen compounds" RELATED [ChEBI] -synonym: "chalcogen molecular entities" RELATED [ChEBI] -synonym: "chalcogen molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "chalcogen compounds" RELATED [chebi] +synonym: "chalcogen molecular entities" RELATED [chebi] +synonym: "chalcogen molecular entity" RELATED [chebi] is_a: CHEBI:33675 ! p-block molecular entity relationship: has_part CHEBI:33303 ! chalcogen [Term] id: CHEBI:33306 name: carbon group element atom -subset: 3_STAR -synonym: "carbon group element" RELATED [ChEBI] -synonym: "carbon group elements" RELATED [ChEBI] -synonym: "carbonoides" RELATED [ChEBI] -synonym: "cristallogene" RELATED [ChEBI] -synonym: "cristallogenes" RELATED [ChEBI] -synonym: "group 14 elements" EXACT IUPAC_NAME [IUPAC] -synonym: "group IV elements" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbon group element" RELATED [chebi] +synonym: "carbon group elements" RELATED [chebi] +synonym: "carbonoides" RELATED [chebi] +synonym: "cristallogene" RELATED [chebi] +synonym: "cristallogenes" RELATED [chebi] +synonym: "group 14 elements" EXACT IUPAC:NAME [IUPAC] +synonym: "group 14 elements" RELATED IUPAC:NAME [iupac] +synonym: "group IV elements" RELATED [chebi] is_a: CHEBI:33560 ! p-block element atom [Term] @@ -7326,14 +7692,15 @@ name: carboxylic ester alt_id: CHEBI:13204 alt_id: CHEBI:23028 alt_id: CHEBI:3408 -def: "An ester of a carboxylic acid, R(1)C(=O)OR(2), where R(1) = H or organyl and R(2) = organyl." [] -subset: 3_STAR -synonym: "a carboxylic ester" RELATED [UniProt] -synonym: "carboxylic acid esters" RELATED [ChEBI] -synonym: "Carboxylic ester" EXACT [KEGG_COMPOUND] -synonym: "carboxylic esters" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C02391 -xref: Wikipedia:Ester +def: "An ester of a carboxylic acid, R1C(=O)OR2, where R1 = H or organyl and R2 = organyl." [] +subset: 3:STAR +synonym: "a carboxylic ester" RELATED [uniprot_ft] +synonym: "carboxylic acid esters" RELATED [chebi] +synonym: "Carboxylic ester" RELATED [kegg.compound] +synonym: "carboxylic esters" EXACT IUPAC:NAME [IUPAC] +synonym: "carboxylic esters" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C02391 {source="kegg.compound"} +xref: wikipedia.en:Ester {source="wikipedia.en"} is_a: CHEBI:35701 ! ester is_a: CHEBI:36586 ! carbonyl compound @@ -7341,36 +7708,38 @@ is_a: CHEBI:36586 ! carbonyl compound id: CHEBI:33318 name: main group element atom def: "An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table." [] -subset: 3_STAR -synonym: "Hauptgruppenelement" RELATED [ChEBI] -synonym: "Hauptgruppenelemente" RELATED [ChEBI] -synonym: "main group element" RELATED [ChEBI] -synonym: "main group elements" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "Hauptgruppenelement" RELATED [chebi] +synonym: "Hauptgruppenelemente" RELATED [chebi] +synonym: "main group element" RELATED [chebi] +synonym: "main group elements" EXACT IUPAC:NAME [IUPAC] +synonym: "main group elements" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33250 ! atom [Term] id: CHEBI:33356 name: iron group element atom -subset: 3_STAR -synonym: "group 8 elements" EXACT IUPAC_NAME [IUPAC] -synonym: "iron group element" RELATED [ChEBI] -synonym: "iron group elements" RELATED [ChEBI] +subset: 3:STAR +synonym: "group 8 elements" EXACT IUPAC:NAME [IUPAC] +synonym: "group 8 elements" RELATED IUPAC:NAME [iupac] +synonym: "iron group element" RELATED [chebi] +synonym: "iron group elements" RELATED [chebi] is_a: CHEBI:33561 ! d-block element atom [Term] id: CHEBI:33402 name: sulfur oxoacid -subset: 3_STAR -synonym: "oxoacids of sulfur" RELATED [ChEBI] -synonym: "sulfur oxoacids" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxoacids of sulfur" RELATED [chebi] +synonym: "sulfur oxoacids" RELATED [chebi] is_a: CHEBI:26835 ! sulfur molecular entity is_a: CHEBI:33484 ! chalcogen oxoacid [Term] id: CHEBI:33408 name: pnictogen oxoacid -subset: 3_STAR -synonym: "pnictogen oxoacids" RELATED [ChEBI] +subset: 3:STAR +synonym: "pnictogen oxoacids" RELATED [chebi] is_a: CHEBI:24833 ! oxoacid is_a: CHEBI:33302 ! pnictogen molecular entity relationship: RO:0000087 CHEBI:138103 ! has role inorganic acid @@ -7378,9 +7747,9 @@ relationship: RO:0000087 CHEBI:138103 ! has role inorganic acid [Term] id: CHEBI:33424 name: sulfur oxoacid derivative -subset: 3_STAR -synonym: "sulfur oxoacid derivative" EXACT [ChEBI] -synonym: "sulfur oxoacid derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "sulfur oxoacid derivative" RELATED [chebi] +synonym: "sulfur oxoacid derivatives" RELATED [chebi] is_a: CHEBI:26835 ! sulfur molecular entity is_a: CHEBI:33241 ! oxoacid derivative @@ -7388,62 +7757,63 @@ is_a: CHEBI:33241 ! oxoacid derivative id: CHEBI:33447 name: phospho sugar alt_id: CHEBI:15132 +alt_id: CHEBI:16442 alt_id: CHEBI:25406 alt_id: CHEBI:26086 alt_id: CHEBI:9320 def: "Any monosaccharide containing an alcoholic hydroxy group esterified with phosphoric acid." [] -subset: 3_STAR -synonym: "monosaccharide phosphates" RELATED [ChEBI] -synonym: "phospho sugar" EXACT [ChEBI] -synonym: "phospho sugars" RELATED [ChEBI] -synonym: "phosphorylated sugar" RELATED [ChEBI] -synonym: "phosphorylated sugars" RELATED [ChEBI] -synonym: "phosphosugar" RELATED [ChEBI] -synonym: "phosphosugars" RELATED [ChEBI] -xref: KEGG:C00934 -xref: PMID:18186488 {source="Europe PMC"} +subset: 3:STAR +synonym: "monosaccharide phosphates" RELATED [chebi] +synonym: "phospho sugar" RELATED [chebi] +synonym: "phospho sugars" RELATED [chebi] +synonym: "phosphorylated sugar" RELATED [chebi] +synonym: "phosphorylated sugars" RELATED [chebi] +synonym: "phosphosugar" RELATED [chebi] +synonym: "phosphosugars" RELATED [chebi] +xref: kegg.compound:C00934 {source="kegg.compound"} +xref: pubmed:18186488 {source="pubmed"} is_a: CHEBI:26816 ! carbohydrate phosphate is_a: CHEBI:63367 ! monosaccharide derivative [Term] id: CHEBI:33452 name: benzylic group -def: "Arylmethyl groups and derivatives formed by substitution: ArCR2-." [] -subset: 3_STAR -synonym: "benzylic group" EXACT [IUPAC] -synonym: "benzylic groups" EXACT IUPAC_NAME [IUPAC] -synonym: "benzylic groups" RELATED [ChEBI] -synonym: "groupe benzylique" RELATED [IUPAC] +def: "Arylmethyl groups and derivatives formed by substitution: ArCR2‒." [] +subset: 3:STAR +synonym: "benzylic group" RELATED [iupac] +synonym: "benzylic groups" EXACT IUPAC:NAME [IUPAC] +synonym: "benzylic groups" RELATED IUPAC:NAME [chebi, iupac] +synonym: "groupe benzylique" RELATED [iupac] is_a: CHEBI:33249 ! organyl group [Term] id: CHEBI:33457 name: phosphorus oxoacid def: "A pnictogen oxoacid which contains phosphorus and oxygen, at least one hydrogen atom bound to oxygen, and forms an ion by the loss of one or more protons." [] -subset: 3_STAR -synonym: "oxoacids of phosphorus" RELATED [ChEBI] -synonym: "Oxosaeure des Phosphors" RELATED [ChEBI] -synonym: "phosphorus oxoacid" EXACT [ChEBI] -synonym: "phosphorus oxoacids" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxoacids of phosphorus" RELATED [chebi] +synonym: "Oxosaeure des Phosphors" RELATED [chebi] +synonym: "phosphorus oxoacid" RELATED [chebi] +synonym: "phosphorus oxoacids" RELATED [chebi] is_a: CHEBI:33408 ! pnictogen oxoacid is_a: CHEBI:36360 ! phosphorus oxoacids and derivatives [Term] id: CHEBI:33459 name: pnictogen oxoanion -subset: 3_STAR -synonym: "pnictogen oxoanion" EXACT [ChEBI] -synonym: "pnictogen oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "pnictogen oxoanion" RELATED [chebi] +synonym: "pnictogen oxoanions" RELATED [chebi] is_a: CHEBI:33302 ! pnictogen molecular entity is_a: CHEBI:35406 ! oxoanion [Term] id: CHEBI:33461 name: phosphorus oxoanion -subset: 3_STAR -synonym: "oxoanions of phosphorus" RELATED [ChEBI] -synonym: "phosphorus oxoanion" EXACT [ChEBI] -synonym: "phosphorus oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxoanions of phosphorus" RELATED [chebi] +synonym: "phosphorus oxoanion" RELATED [chebi] +synonym: "phosphorus oxoanions" RELATED [chebi] is_a: CHEBI:24834 ! inorganic anion is_a: CHEBI:26082 ! phosphorus molecular entity is_a: CHEBI:33459 ! pnictogen oxoanion @@ -7451,63 +7821,63 @@ is_a: CHEBI:33459 ! pnictogen oxoanion [Term] id: CHEBI:33482 name: sulfur oxoanion -subset: 3_STAR -synonym: "oxoanions of sulfur" RELATED [ChEBI] -synonym: "sulfur oxoanion" EXACT [ChEBI] -synonym: "sulfur oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxoanions of sulfur" RELATED [chebi] +synonym: "sulfur oxoanion" RELATED [chebi] +synonym: "sulfur oxoanions" RELATED [chebi] is_a: CHEBI:26835 ! sulfur molecular entity is_a: CHEBI:33485 ! chalcogen oxoanion [Term] id: CHEBI:33484 name: chalcogen oxoacid -subset: 3_STAR -synonym: "chalcogen oxoacid" EXACT [ChEBI] -synonym: "chalcogen oxoacids" RELATED [ChEBI] +subset: 3:STAR +synonym: "chalcogen oxoacid" RELATED [chebi] +synonym: "chalcogen oxoacids" RELATED [chebi] is_a: CHEBI:24833 ! oxoacid relationship: RO:0000087 CHEBI:138103 ! has role inorganic acid [Term] id: CHEBI:33485 name: chalcogen oxoanion -subset: 3_STAR -synonym: "chalcogen oxoanion" EXACT [ChEBI] -synonym: "chalcogen oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "chalcogen oxoanion" RELATED [chebi] +synonym: "chalcogen oxoanions" RELATED [chebi] is_a: CHEBI:35406 ! oxoanion [Term] id: CHEBI:33497 name: transition element molecular entity def: "A molecular entity containing one or more atoms of a transition element." [] -subset: 3_STAR -synonym: "transition element molecular entities" RELATED [ChEBI] -synonym: "transition metal molecular entity" RELATED [ChEBI] +subset: 3:STAR +synonym: "transition element molecular entities" RELATED [chebi] +synonym: "transition metal molecular entity" RELATED [chebi] is_a: CHEBI:23367 ! molecular entity relationship: has_part CHEBI:27081 ! transition element atom [Term] id: CHEBI:33504 name: alkali metal cation -subset: 3_STAR -synonym: "alkali metal cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkali metal cations" RELATED [chebi] is_a: CHEBI:25213 ! metal cation [Term] id: CHEBI:33513 name: alkaline earth cation -subset: 3_STAR -synonym: "alkaline earth cations" RELATED [ChEBI] -synonym: "alkaline earth metal cation" RELATED [ChEBI] -synonym: "alkaline-earth metal cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkaline earth cations" RELATED [chebi] +synonym: "alkaline earth metal cation" RELATED [chebi] +synonym: "alkaline-earth metal cations" RELATED [chebi] is_a: CHEBI:25213 ! metal cation is_a: CHEBI:33299 ! alkaline earth molecular entity [Term] id: CHEBI:33515 name: transition element cation -subset: 3_STAR -synonym: "transition element cations" RELATED [ChEBI] -synonym: "transition metal cation" RELATED [ChEBI] +subset: 3:STAR +synonym: "transition element cations" RELATED [chebi] +synonym: "transition metal cation" RELATED [chebi] is_a: CHEBI:25213 ! metal cation [Term] @@ -7516,51 +7886,51 @@ name: metal atom alt_id: CHEBI:25217 alt_id: CHEBI:6788 def: "An atom of an element that exhibits typical metallic properties, being typically shiny, with high electrical and thermal conductivity." [] -subset: 3_STAR -synonym: "elemental metal" RELATED [ChEBI] -synonym: "elemental metals" RELATED [ChEBI] -synonym: "metal element" RELATED [ChEBI] -synonym: "metal elements" RELATED [ChEBI] -synonym: "metals" RELATED [ChEBI] -xref: KEGG:C00050 -xref: PMID:21784043 {source="Europe PMC"} -xref: Wikipedia:Metal +subset: 3:STAR +synonym: "elemental metal" RELATED [chebi] +synonym: "elemental metals" RELATED [chebi] +synonym: "metal element" RELATED [chebi] +synonym: "metal elements" RELATED [chebi] +synonym: "metals" RELATED [chebi] +xref: kegg.compound:C00050 {source="kegg.compound"} +xref: pubmed:21784043 {source="pubmed"} +xref: wikipedia.en:Metal {source="wikipedia.en"} is_a: CHEBI:33250 ! atom [Term] id: CHEBI:33558 name: alpha-amino-acid anion -def: "An amino-acid anion obtained by deprotonation of any alpha-amino acid." [] -subset: 3_STAR -synonym: "alpha-amino acid anion" RELATED [ChEBI] -synonym: "alpha-amino acid anions" RELATED [ChEBI] -synonym: "alpha-amino-acid anions" RELATED [ChEBI] +def: "An amino-acid anion obtained by deprotonation of any α-amino acid." [] +subset: 3:STAR +synonym: "alpha-amino acid anion" RELATED [chebi] +synonym: "alpha-amino acid anions" RELATED [chebi] +synonym: "alpha-amino-acid anions" RELATED [chebi] is_a: CHEBI:37022 ! amino-acid anion -relationship: is_conjugate_base_of CHEBI:33704 ! alpha-amino acid +relationship: RO:0018033 CHEBI:33704 ! is deprotonated form of alpha-amino acid [Term] id: CHEBI:33559 name: s-block element atom -subset: 3_STAR -synonym: "s-block element" RELATED [ChEBI] -synonym: "s-block elements" RELATED [ChEBI] +subset: 3:STAR +synonym: "s-block element" RELATED [chebi] +synonym: "s-block elements" RELATED [chebi] is_a: CHEBI:33250 ! atom [Term] id: CHEBI:33560 name: p-block element atom def: "Any main group element atom belonging to the p-block of the periodic table." [] -subset: 3_STAR -synonym: "p-block element" RELATED [ChEBI] -synonym: "p-block elements" RELATED [ChEBI] +subset: 3:STAR +synonym: "p-block element" RELATED [chebi] +synonym: "p-block elements" RELATED [chebi] is_a: CHEBI:33318 ! main group element atom [Term] id: CHEBI:33561 name: d-block element atom -subset: 3_STAR -synonym: "d-block element" RELATED [ChEBI] -synonym: "d-block elements" RELATED [ChEBI] +subset: 3:STAR +synonym: "d-block element" RELATED [chebi] +synonym: "d-block elements" RELATED [chebi] is_a: CHEBI:27081 ! transition element atom [Term] @@ -7568,13 +7938,14 @@ id: CHEBI:33563 name: glycolipid alt_id: CHEBI:24393 alt_id: CHEBI:5476 -def: "Any member of class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar part acylated by one or more fatty acids and the glycerol part may be absent." [] -subset: 3_STAR -synonym: "a glycolipid" RELATED [UniProt] -synonym: "Glycolipid" EXACT [KEGG_COMPOUND] -synonym: "glycolipids" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C05005 -xref: Wikipedia:Glycolipids +def: "Any member of class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar part acylated by one or more fatty acids and the glycerol part may be absent." [] +subset: 3:STAR +synonym: "a glycolipid" RELATED [uniprot_ft] +synonym: "Glycolipid" RELATED [kegg.compound] +synonym: "glycolipids" EXACT IUPAC:NAME [IUPAC] +synonym: "glycolipids" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C05005 {source="kegg.compound"} +xref: wikipedia.en:Glycolipids {source="wikipedia.en"} is_a: CHEBI:35740 ! liposaccharide [Term] @@ -7583,12 +7954,12 @@ name: catechols alt_id: CHEBI:134187 alt_id: CHEBI:13628 alt_id: CHEBI:18862 -def: "Any compound containing an o-diphenol component." [] -subset: 3_STAR -synonym: "1,2-benzenediols" RELATED [ChEBI] -synonym: "a catechol" RELATED [UniProt] -synonym: "benzene-1,2-diols" RELATED [ChEBI] -xref: KEGG:C15571 +def: "Any compound containing an o-diphenol component." [] +subset: 3:STAR +synonym: "1,2-benzenediols" RELATED [chebi] +synonym: "a catechol" RELATED [uniprot_ft] +synonym: "benzene-1,2-diols" RELATED [chebi] +xref: kegg.compound:C15571 {source="kegg.compound"} is_a: CHEBI:33570 ! benzenediols [Term] @@ -7597,11 +7968,11 @@ name: catecholamine alt_id: CHEBI:23056 alt_id: CHEBI:3468 def: "4-(2-Aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution." [] -subset: 3_STAR -synonym: "Catecholamine" EXACT [KEGG_COMPOUND] -synonym: "catecholamines" EXACT IUPAC_NAME [IUPAC] -synonym: "catecholamines" RELATED [ChEBI] -xref: KEGG:C02012 +subset: 3:STAR +synonym: "Catecholamine" RELATED [kegg.compound] +synonym: "catecholamines" EXACT IUPAC:NAME [IUPAC] +synonym: "catecholamines" RELATED IUPAC:NAME [chebi, iupac] +xref: kegg.compound:C02012 {source="kegg.compound"} is_a: CHEBI:25375 ! monoamine molecular messenger is_a: CHEBI:33566 ! catechols @@ -7609,36 +7980,39 @@ is_a: CHEBI:33566 ! catechols id: CHEBI:33569 name: noradrenaline def: "A catecholamine in which C-1 of the aminoethyl side-chain is hydroxy-substituted." [] -subset: 3_STAR -synonym: "4-(2-amino-1-hydroxyethyl)benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "noradrenalina" RELATED [ChEBI] -synonym: "norepinephrine" RELATED [ChEBI] -xref: Beilstein:2210994 {source="Beilstein"} -xref: CAS:138-65-8 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: Gmelin:863925 {source="Gmelin"} -xref: LINCS:LSM-5181 +subset: 3:STAR +synonym: "4-(2-amino-1-hydroxyethyl)benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-(2-amino-1-hydroxyethyl)benzene-1,2-diol" RELATED IUPAC:NAME [iupac] +synonym: "noradrenalina" RELATED [chebi] +synonym: "norepinephrine" RELATED [chebi] +xref: beilstein:2210994 {source="beilstein"} +xref: cas:138-65-8 {source="cas"} +xref: gmelin:863925 {source="gmelin"} +xref: lincs.smallmolecule:LSM-5181 {source="lincs.smallmolecule"} is_a: CHEBI:33567 ! catecholamine -relationship: is_conjugate_base_of CHEBI:166902 ! noradrenaline(1+) relationship: RO:0000087 CHEBI:76967 ! has role human xenobiotic metabolite +relationship: RO:0018033 CHEBI:166902 ! is deprotonated form of noradrenaline(1+) [Term] id: CHEBI:33570 name: benzenediols alt_id: CHEBI:22705 alt_id: CHEBI:22711 -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:33853 ! phenols [Term] id: CHEBI:33571 name: (S)-noradrenaline -def: "The S-enantiomer of noradrenaline." [] -subset: 3_STAR -synonym: "4-[(1S)-2-amino-1-hydroxyethyl]benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] -xref: LINCS:LSM-37072 -xref: Reaxys:2937999 {source="Reaxys"} +def: "The S-enantiomer of noradrenaline." [] +subset: 3:STAR +synonym: "4-[(1S)-2-amino-1-hydroxyethyl]benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-[(1S)-2-amino-1-hydroxyethyl]benzene-1,2-diol" RELATED IUPAC:NAME [iupac] +xref: lincs.smallmolecule:LSM-37072 {source="lincs.smallmolecule"} +xref: reaxys:2937999 {source="reaxys"} is_a: CHEBI:33569 ! noradrenaline -relationship: is_enantiomer_of CHEBI:18357 ! (R)-noradrenaline +relationship: RO:0018033 CHEBI:234420 ! is deprotonated form of (S)-noradrenaline(1+) +relationship: RO:0018039 CHEBI:18357 ! is enantiomer of (R)-noradrenaline [Term] id: CHEBI:33575 @@ -7646,43 +8020,45 @@ name: carboxylic acid alt_id: CHEBI:13428 alt_id: CHEBI:13627 alt_id: CHEBI:23027 -def: "A carbon oxoacid acid carrying at least one -C(=O)OH group and having the structure RC(=O)OH, where R is any any monovalent functional group. Carboxylic acids are the most common type of organic acid." [] -subset: 3_STAR -synonym: "acide carboxylique" RELATED [IUPAC] -synonym: "acides carboxyliques" RELATED [IUPAC] -synonym: "acido carboxilico" RELATED [IUPAC] -synonym: "acidos carboxilicos" RELATED [IUPAC] -synonym: "Carbonsaeure" RELATED [ChEBI] -synonym: "Carbonsaeuren" RELATED [ChEBI] -synonym: "carboxylic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "carboxylic acids" EXACT IUPAC_NAME [IUPAC] -synonym: "Karbonsaeure" RELATED [ChEBI] -synonym: "RC(=O)OH" RELATED [IUPAC] -xref: PMID:17147560 {source="Europe PMC"} -xref: PMID:18433345 {source="Europe PMC"} -xref: Wikipedia:Carboxylic_acid +def: "A carbon oxoacid acid carrying at least one ‒C(=O)OH group and having the structure RC(=O)OH, where R is any any monovalent functional group. Carboxylic acids are the most common type of organic acid." [] +subset: 3:STAR +synonym: "acide carboxylique" RELATED [iupac] +synonym: "acides carboxyliques" RELATED [iupac] +synonym: "acido carboxilico" RELATED [iupac] +synonym: "acidos carboxilicos" RELATED [iupac] +synonym: "Carbonsaeure" RELATED [chebi] +synonym: "Carbonsaeuren" RELATED [chebi] +synonym: "carboxylic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "carboxylic acid" RELATED IUPAC:NAME [iupac] +synonym: "carboxylic acids" EXACT IUPAC:NAME [IUPAC] +synonym: "carboxylic acids" RELATED IUPAC:NAME [iupac] +synonym: "Karbonsaeure" RELATED [chebi] +synonym: "RC(=O)OH" RELATED [iupac] +xref: pubmed:17147560 {source="pubmed"} +xref: pubmed:18433345 {source="pubmed"} +xref: wikipedia.en:Carboxylic_acid {source="wikipedia.en"} is_a: CHEBI:35605 ! carbon oxoacid is_a: CHEBI:36586 ! carbonyl compound is_a: CHEBI:64709 ! organic acid relationship: has_part CHEBI:46883 ! carboxy group -relationship: is_conjugate_acid_of CHEBI:29067 ! carboxylic acid anion +relationship: RO:0018034 CHEBI:29067 ! is protonated form of carboxylic acid anion [Term] id: CHEBI:33579 name: main group molecular entity def: "A molecular entity containing one or more atoms from any of groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table." [] -subset: 3_STAR -synonym: "main group compounds" RELATED [ChEBI] -synonym: "main group molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "main group compounds" RELATED [chebi] +synonym: "main group molecular entities" RELATED [chebi] is_a: CHEBI:23367 ! molecular entity relationship: has_part CHEBI:33318 ! main group element atom [Term] id: CHEBI:33582 name: carbon group molecular entity -subset: 3_STAR -synonym: "carbon group molecular entities" RELATED [ChEBI] -synonym: "carbon group molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "carbon group molecular entities" RELATED [chebi] +synonym: "carbon group molecular entity" RELATED [chebi] is_a: CHEBI:33675 ! p-block molecular entity relationship: has_part CHEBI:33306 ! carbon group element atom @@ -7690,134 +8066,147 @@ relationship: has_part CHEBI:33306 ! carbon group element atom id: CHEBI:33595 name: cyclic compound def: "Any molecule that consists of a series of atoms joined together to form a ring." [] -subset: 3_STAR -synonym: "cyclic compounds" RELATED [ChEBI] -xref: Wikipedia:Cyclic_compound +subset: 3:STAR +synonym: "cyclic compounds" RELATED [chebi] +xref: wikipedia.en:Cyclic_compound {source="wikipedia.en"} is_a: CHEBI:25367 ! molecule [Term] id: CHEBI:33597 name: homocyclic compound def: "A cyclic compound having as ring members atoms of the same element only." [] -subset: 3_STAR -synonym: "homocyclic compound" EXACT IUPAC_NAME [IUPAC] -synonym: "homocyclic compounds" EXACT IUPAC_NAME [IUPAC] -synonym: "isocyclic compounds" RELATED [IUPAC] +subset: 3:STAR +synonym: "homocyclic compound" EXACT IUPAC:NAME [IUPAC] +synonym: "homocyclic compound" RELATED IUPAC:NAME [iupac] +synonym: "homocyclic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "homocyclic compounds" RELATED IUPAC:NAME [iupac] +synonym: "isocyclic compounds" RELATED [iupac] is_a: CHEBI:33595 ! cyclic compound [Term] id: CHEBI:33598 name: carbocyclic compound def: "A homocyclic compound in which all of the ring members are carbon atoms." [] -subset: 3_STAR -synonym: "carbocycle" RELATED [ChEBI] -synonym: "carbocyclic compound" EXACT IUPAC_NAME [IUPAC] -synonym: "carbocyclic compounds" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "carbocycle" RELATED [chebi] +synonym: "carbocyclic compound" EXACT IUPAC:NAME [IUPAC] +synonym: "carbocyclic compound" RELATED IUPAC:NAME [iupac] +synonym: "carbocyclic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "carbocyclic compounds" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33597 ! homocyclic compound is_a: CHEBI:33832 ! organic cyclic compound [Term] id: CHEBI:33608 name: hydrogen molecular entity -subset: 3_STAR -synonym: "hydrogen compounds" RELATED [ChEBI] -synonym: "hydrogen molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "hydrogen compounds" RELATED [chebi] +synonym: "hydrogen molecular entities" RELATED [chebi] is_a: CHEBI:33674 ! s-block molecular entity relationship: has_part CHEBI:49637 ! hydrogen atom [Term] id: CHEBI:33635 name: polycyclic compound -subset: 3_STAR -synonym: "polycyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "polycyclic compounds" RELATED [chebi] is_a: CHEBI:33595 ! cyclic compound [Term] id: CHEBI:33636 name: bicyclic compound def: "A molecule that features two fused rings." [] -subset: 3_STAR -synonym: "bicyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "bicyclic compounds" RELATED [chebi] is_a: CHEBI:33595 ! cyclic compound [Term] id: CHEBI:33653 name: aliphatic compound def: "Any acyclic or cyclic, saturated or unsaturated carbon compound, excluding aromatic compounds." [] -subset: 3_STAR -synonym: "aliphatic compounds" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "aliphatic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "aliphatic compounds" RELATED IUPAC:NAME [iupac] is_a: CHEBI:50860 ! organic molecular entity [Term] id: CHEBI:33655 name: aromatic compound -def: "A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekule structure) is said to possess aromatic character." [] -subset: 3_STAR -synonym: "aromatic compounds" EXACT IUPAC_NAME [IUPAC] -synonym: "aromatic molecular entity" EXACT IUPAC_NAME [IUPAC] -synonym: "aromatics" RELATED [ChEBI] -synonym: "aromatische Verbindungen" RELATED [ChEBI] +def: "A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekulé structure) is said to possess aromatic character." [] +subset: 3:STAR +synonym: "aromatic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "aromatic compounds" RELATED IUPAC:NAME [iupac] +synonym: "aromatic molecular entity" EXACT IUPAC:NAME [IUPAC] +synonym: "aromatic molecular entity" RELATED IUPAC:NAME [iupac] +synonym: "aromatics" RELATED [chebi] +synonym: "aromatische Verbindungen" RELATED [chebi] is_a: CHEBI:33595 ! cyclic compound [Term] id: CHEBI:33658 name: arene def: "Any monocyclic or polycyclic aromatic hydrocarbon." [] -subset: 3_STAR -synonym: "arene" EXACT IUPAC_NAME [IUPAC] -synonym: "arenes" EXACT IUPAC_NAME [IUPAC] -synonym: "aromatic hydrocarbons" RELATED [IUPAC] +subset: 3:STAR +synonym: "arene" EXACT IUPAC:NAME [IUPAC] +synonym: "arene" RELATED IUPAC:NAME [iupac] +synonym: "arenes" EXACT IUPAC:NAME [IUPAC] +synonym: "arenes" RELATED IUPAC:NAME [iupac] +synonym: "aromatic hydrocarbons" RELATED [iupac] is_a: CHEBI:33659 ! organic aromatic compound is_a: CHEBI:33663 ! cyclic hydrocarbon [Term] id: CHEBI:33659 name: organic aromatic compound -subset: 3_STAR -synonym: "organic aromatic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic aromatic compounds" RELATED [chebi] is_a: CHEBI:33655 ! aromatic compound is_a: CHEBI:33832 ! organic cyclic compound [Term] id: CHEBI:33661 name: monocyclic compound -subset: 3_STAR -synonym: "monocyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "monocyclic compounds" RELATED [chebi] is_a: CHEBI:33595 ! cyclic compound [Term] id: CHEBI:33662 name: annulene -def: "A mancude monocyclic hydrocarbon without side chains of the general formula CnHn (n is an even number) or CnHn+1 (n is an odd number). In systematic nomenclature an annulene with seven or more carbon atoms may be named [n]annulene, where n is the number of carbon atoms." [] -subset: 3_STAR -synonym: "annulene" EXACT IUPAC_NAME [IUPAC] -synonym: "annulenes" EXACT IUPAC_NAME [IUPAC] +def: "A mancude monocyclic hydrocarbon without side chains of the general formula CnHn (n is an even number) or CnHn+1 (n is an odd number). In systematic nomenclature an annulene with seven or more carbon atoms may be named [n]annulene, where n is the number of carbon atoms." [] +subset: 3:STAR +synonym: "annulene" EXACT IUPAC:NAME [IUPAC] +synonym: "annulene" RELATED IUPAC:NAME [iupac] +synonym: "annulenes" EXACT IUPAC:NAME [IUPAC] +synonym: "annulenes" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33664 ! monocyclic hydrocarbon [Term] id: CHEBI:33663 name: cyclic hydrocarbon -subset: 3_STAR -synonym: "cyclic hydrocarbon" EXACT [ChEBI] -synonym: "cyclic hydrocarbons" RELATED [ChEBI] +subset: 3:STAR +synonym: "cyclic hydrocarbon" RELATED [chebi] +synonym: "cyclic hydrocarbons" RELATED [chebi] is_a: CHEBI:24632 ! hydrocarbon is_a: CHEBI:33598 ! carbocyclic compound [Term] id: CHEBI:33664 name: monocyclic hydrocarbon -subset: 3_STAR -synonym: "monocyclic hydrocarbon" EXACT [ChEBI] -synonym: "monocyclic hydrocarbons" EXACT IUPAC_NAME [IUPAC] -synonym: "monocyclic hydrocarbons" RELATED [ChEBI] +subset: 3:STAR +synonym: "monocyclic hydrocarbon" RELATED [chebi] +synonym: "monocyclic hydrocarbons" EXACT IUPAC:NAME [IUPAC] +synonym: "monocyclic hydrocarbons" RELATED IUPAC:NAME [chebi, iupac] is_a: CHEBI:33663 ! cyclic hydrocarbon [Term] id: CHEBI:33670 name: heteromonocyclic compound -subset: 3_STAR -synonym: "heteromonocyclic compound" EXACT IUPAC_NAME [IUPAC] -synonym: "heteromonocyclic compounds" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "heteromonocyclic compound" EXACT IUPAC:NAME [IUPAC] +synonym: "heteromonocyclic compound" RELATED IUPAC:NAME [iupac] +synonym: "heteromonocyclic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "heteromonocyclic compounds" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33661 ! monocyclic compound is_a: CHEBI:5686 ! heterocyclic compound @@ -7825,9 +8214,10 @@ is_a: CHEBI:5686 ! heterocyclic compound id: CHEBI:33671 name: heteropolycyclic compound def: "A polycyclic compound in which at least one of the rings contains at least one non-carbon atom." [] -subset: 3_STAR -synonym: "heteropolycyclic compounds" EXACT IUPAC_NAME [IUPAC] -synonym: "polyheterocyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "heteropolycyclic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "heteropolycyclic compounds" RELATED IUPAC:NAME [iupac] +synonym: "polyheterocyclic compounds" RELATED [chebi] is_a: CHEBI:33635 ! polycyclic compound is_a: CHEBI:5686 ! heterocyclic compound @@ -7835,8 +8225,9 @@ is_a: CHEBI:5686 ! heterocyclic compound id: CHEBI:33672 name: heterobicyclic compound def: "A bicyclic compound in which at least one of the rings contains at least one skeletal heteroatom." [] -subset: 3_STAR -synonym: "heterobicyclic compounds" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "heterobicyclic compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "heterobicyclic compounds" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33636 ! bicyclic compound is_a: CHEBI:5686 ! heterocyclic compound @@ -7844,10 +8235,10 @@ is_a: CHEBI:5686 ! heterocyclic compound id: CHEBI:33674 name: s-block molecular entity def: "An s-block molecular entity is a molecular entity containing one or more atoms of an s-block element." [] -subset: 3_STAR -synonym: "s-block compounds" RELATED [ChEBI] -synonym: "s-block molecular entities" RELATED [ChEBI] -synonym: "s-block molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "s-block compounds" RELATED [chebi] +synonym: "s-block molecular entities" RELATED [chebi] +synonym: "s-block molecular entity" RELATED [chebi] is_a: CHEBI:33579 ! main group molecular entity relationship: has_part CHEBI:33559 ! s-block element atom @@ -7855,10 +8246,10 @@ relationship: has_part CHEBI:33559 ! s-block element atom id: CHEBI:33675 name: p-block molecular entity def: "A main group molecular entity that contains one or more atoms of a p-block element." [] -subset: 3_STAR -synonym: "p-block compounds" RELATED [ChEBI] -synonym: "p-block molecular entities" RELATED [ChEBI] -synonym: "p-block molecular entitiy" RELATED [ChEBI] +subset: 3:STAR +synonym: "p-block compounds" RELATED [chebi] +synonym: "p-block molecular entities" RELATED [chebi] +synonym: "p-block molecular entitiy" RELATED [chebi] is_a: CHEBI:33579 ! main group molecular entity relationship: has_part CHEBI:33560 ! p-block element atom @@ -7866,10 +8257,10 @@ relationship: has_part CHEBI:33560 ! p-block element atom id: CHEBI:33676 name: d-block molecular entity def: "A d-block molecular entity is a molecular entity containing one or more atoms of a d-block element." [] -subset: 3_STAR -synonym: "d-block compounds" RELATED [ChEBI] -synonym: "d-block molecular entities" RELATED [ChEBI] -synonym: "d-block molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "d-block compounds" RELATED [chebi] +synonym: "d-block molecular entities" RELATED [chebi] +synonym: "d-block molecular entity" RELATED [chebi] is_a: CHEBI:33497 ! transition element molecular entity relationship: has_part CHEBI:33561 ! d-block element atom @@ -7877,56 +8268,58 @@ relationship: has_part CHEBI:33561 ! d-block element atom id: CHEBI:33692 name: hydrides def: "Hydrides are chemical compounds of hydrogen with other chemical elements." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:33608 ! hydrogen molecular entity is_a: CHEBI:37577 ! heteroatomic molecular entity [Term] id: CHEBI:33693 name: oxygen hydride -subset: 3_STAR -synonym: "hydrides of oxygen" RELATED [ChEBI] -synonym: "oxygen hydride" EXACT [ChEBI] -synonym: "oxygen hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "hydrides of oxygen" RELATED [chebi] +synonym: "oxygen hydride" RELATED [chebi] +synonym: "oxygen hydrides" RELATED [chebi] is_a: CHEBI:36902 ! chalcogen hydride [Term] id: CHEBI:33694 name: biomacromolecule def: "A macromolecule formed by a living organism." [] -subset: 3_STAR -synonym: "biomacromolecules" RELATED [ChEBI] -synonym: "biopolymer" EXACT IUPAC_NAME [IUPAC] -synonym: "Biopolymere" RELATED [ChEBI] -synonym: "biopolymers" RELATED [ChEBI] +subset: 3:STAR +synonym: "biomacromolecules" RELATED [chebi] +synonym: "biopolymer" EXACT IUPAC:NAME [IUPAC] +synonym: "biopolymer" RELATED IUPAC:NAME [iupac] +synonym: "Biopolymere" RELATED [chebi] +synonym: "biopolymers" RELATED [chebi] is_a: CHEBI:33839 ! macromolecule is_a: CHEBI:50860 ! organic molecular entity [Term] id: CHEBI:33695 name: information biomacromolecule -subset: 3_STAR -synonym: "genetically encoded biomacromolecules" RELATED [ChEBI] -synonym: "genetically encoded biopolymers" RELATED [ChEBI] -synonym: "information biomacromolecules" RELATED [ChEBI] -synonym: "information biopolymers" RELATED [ChEBI] -synonym: "information macromolecule" RELATED [ChEBI] -synonym: "information macromolecules" RELATED [ChEBI] +subset: 3:STAR +synonym: "genetically encoded biomacromolecules" RELATED [chebi] +synonym: "genetically encoded biopolymers" RELATED [chebi] +synonym: "information biomacromolecules" RELATED [chebi] +synonym: "information biopolymers" RELATED [chebi] +synonym: "information macromolecule" RELATED [chebi] +synonym: "information macromolecules" RELATED [chebi] is_a: CHEBI:33694 ! biomacromolecule [Term] id: CHEBI:33696 name: nucleic acid -def: "A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid." [] -subset: 3_STAR -synonym: "acide nucleique" RELATED [ChEBI] -synonym: "acides nucleiques" RELATED [ChEBI] -synonym: "acido nucleico" RELATED [ChEBI] -synonym: "acidos nucleicos" RELATED [ChEBI] -synonym: "NA" RELATED [ChEBI] -synonym: "nucleic acids" EXACT IUPAC_NAME [IUPAC] -synonym: "Nukleinsaeure" RELATED [ChEBI] -synonym: "Nukleinsaeuren" RELATED [ChEBI] +def: "A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid." [] +subset: 3:STAR +synonym: "acide nucleique" RELATED [chebi] +synonym: "acides nucleiques" RELATED [chebi] +synonym: "acido nucleico" RELATED [chebi] +synonym: "acidos nucleicos" RELATED [chebi] +synonym: "NA" RELATED [] +synonym: "nucleic acids" EXACT IUPAC:NAME [IUPAC] +synonym: "nucleic acids" RELATED IUPAC:NAME [iupac] +synonym: "Nukleinsaeure" RELATED [chebi] +synonym: "Nukleinsaeuren" RELATED [chebi] is_a: CHEBI:15986 ! polynucleotide relationship: has_part CHEBI:33791 ! canonical nucleoside residue relationship: has_part CHEBI:50297 ! canonical nucleotide residue @@ -7935,17 +8328,17 @@ relationship: has_part CHEBI:50297 ! canonical nucleotide residue id: CHEBI:33697 name: ribonucleic acid def: "High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins." [] -subset: 3_STAR -synonym: "pentosenucleic acids" RELATED [ChemIDplus] -synonym: "ribonucleic acid" EXACT [IUPAC] -synonym: "ribonucleic acids" EXACT IUPAC_NAME [IUPAC] -synonym: "ribonucleic acids" RELATED [ChEBI] -synonym: "Ribonukleinsaeure" RELATED [ChEBI] -synonym: "ribose nucleic acid" RELATED [ChEBI] -synonym: "RNA" RELATED [IUPAC, UniProt] -synonym: "RNS" RELATED [ChEBI] -synonym: "yeast nucleic acid" RELATED [ChEBI] -xref: CAS:63231-63-0 {source="ChemIDplus"} +subset: 3:STAR +synonym: "pentosenucleic acids" RELATED [chemidplus] +synonym: "ribonucleic acid" RELATED [iupac] +synonym: "ribonucleic acids" EXACT IUPAC:NAME [IUPAC] +synonym: "ribonucleic acids" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Ribonukleinsaeure" RELATED [chebi] +synonym: "ribose nucleic acid" RELATED [chebi] +synonym: "RNA" RELATED [iupac, uniprot_ft] +synonym: "RNS" RELATED [chebi] +synonym: "yeast nucleic acid" RELATED [chebi] +xref: cas:63231-63-0 {source="cas"} is_a: CHEBI:33696 ! nucleic acid relationship: has_part CHEBI:33792 ! canonical ribonucleoside residue relationship: has_part CHEBI:50299 ! canonical ribonucleotide residue @@ -7953,34 +8346,34 @@ relationship: has_part CHEBI:50299 ! canonical ribonucleotide residue [Term] id: CHEBI:33700 name: proteinogenic amino-acid residue -subset: 3_STAR -synonym: "canonical amino-acid residue" RELATED [ChEBI] -synonym: "canonical amino-acid residues" RELATED [ChEBI] -synonym: "common amino acid residues" RELATED [ChEBI] -synonym: "proteinogenic amino-acid residues" RELATED [ChEBI] -synonym: "standard amino acid residues" RELATED [ChEBI] -synonym: "standard amino-acid residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical amino-acid residue" RELATED [chebi] +synonym: "canonical amino-acid residues" RELATED [chebi] +synonym: "common amino acid residues" RELATED [chebi] +synonym: "proteinogenic amino-acid residues" RELATED [chebi] +synonym: "standard amino acid residues" RELATED [chebi] +synonym: "standard amino-acid residues" RELATED [chebi] is_a: CHEBI:33710 ! alpha-amino-acid residue [Term] id: CHEBI:33702 name: polyatomic cation def: "A cation consisting of more than one atom." [] -subset: 3_STAR -synonym: "polyatomic cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "polyatomic cations" RELATED [chebi] is_a: CHEBI:36358 ! polyatomic ion is_a: CHEBI:36916 ! cation [Term] id: CHEBI:33703 name: amino-acid cation -subset: 3_STAR -synonym: "amino acid cation" RELATED [ChEBI] -synonym: "amino acid cations" RELATED [ChEBI] -synonym: "amino-acid cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino acid cation" RELATED [chebi] +synonym: "amino acid cations" RELATED [chebi] +synonym: "amino-acid cations" RELATED [chebi] is_a: CHEBI:25697 ! organic cation is_a: CHEBI:33702 ! polyatomic cation -relationship: is_conjugate_acid_of CHEBI:33709 ! amino acid +relationship: RO:0018034 CHEBI:33709 ! is protonated form of amino acid [Term] id: CHEBI:33704 @@ -7989,43 +8382,45 @@ alt_id: CHEBI:10208 alt_id: CHEBI:13779 alt_id: CHEBI:22442 alt_id: CHEBI:2642 -def: "An amino acid in which the amino group is located on the carbon atom at the position alpha to the carboxy group." [] -subset: 3_STAR -synonym: "alpha-amino acid" EXACT IUPAC_NAME [IUPAC] -synonym: "alpha-amino acids" RELATED [ChEBI, JCBN] -synonym: "alpha-amino carboxylic acids" RELATED [IUPAC] -synonym: "Amino acid" RELATED [KEGG_COMPOUND] -synonym: "Amino acids" RELATED [KEGG_COMPOUND] -xref: KEGG:C00045 -xref: KEGG:C05167 +def: "An amino acid in which the amino group is located on the carbon atom at the position α to the carboxy group." [] +subset: 3:STAR +synonym: "alpha-amino acid" EXACT IUPAC:NAME [IUPAC] +synonym: "alpha-amino acid" RELATED IUPAC:NAME [iupac] +synonym: "alpha-amino acids" RELATED [chebi, jcbn] +synonym: "alpha-amino carboxylic acids" RELATED [iupac] +synonym: "Amino acid" RELATED [kegg.compound] +synonym: "Amino acids" RELATED [kegg.compound] +xref: kegg.compound:C00045 {source="kegg.compound"} +xref: kegg.compound:C05167 {source="kegg.compound"} is_a: CHEBI:33709 ! amino acid -relationship: is_conjugate_acid_of CHEBI:33558 ! alpha-amino-acid anion -relationship: is_conjugate_base_of CHEBI:33719 ! alpha-amino-acid cation -relationship: is_tautomer_of CHEBI:78608 ! alpha-amino-acid zwitterion +relationship: RO:0018033 CHEBI:33719 ! is deprotonated form of alpha-amino-acid cation +relationship: RO:0018034 CHEBI:33558 ! is protonated form of alpha-amino-acid anion +relationship: RO:0018036 CHEBI:78608 ! is tautomer of alpha-amino-acid zwitterion [Term] id: CHEBI:33707 name: gamma-amino acid -def: "A non-proteinogenic amino-acid in which the amino group is located on the carbon atom at the position gamma to the carboxy group." [] -subset: 3_STAR -synonym: "gamma-amino acid" EXACT [ChEBI] -synonym: "gamma-amino acids" RELATED [ChEBI] +def: "A non-proteinogenic amino-acid in which the amino group is located on the carbon atom at the position γ to the carboxy group." [] +subset: 3:STAR +synonym: "gamma-amino acid" RELATED [chebi] +synonym: "gamma-amino acids" RELATED [chebi] is_a: CHEBI:83820 ! non-proteinogenic amino acid -relationship: is_conjugate_acid_of CHEBI:71666 ! gamma-amino acid anion +relationship: RO:0018034 CHEBI:71666 ! is protonated form of gamma-amino acid anion [Term] id: CHEBI:33708 name: amino-acid residue def: "When two or more amino acids combine to form a peptide, the elements of water are removed, and what remains of each amino acid is called an amino-acid residue." [] -subset: 3_STAR -synonym: "amino acid residue" RELATED [ChEBI] -synonym: "amino acid residues" RELATED [ChEBI] -synonym: "amino-acid residue" EXACT IUPAC_NAME [IUPAC] -synonym: "amino-acid residues" RELATED [JCBN] +subset: 3:STAR +synonym: "amino acid residue" RELATED [chebi] +synonym: "amino acid residues" RELATED [chebi] +synonym: "amino-acid residue" EXACT IUPAC:NAME [IUPAC] +synonym: "amino-acid residue" RELATED IUPAC:NAME [iupac] +synonym: "amino-acid residues" RELATED [jcbn] is_a: CHEBI:33247 ! organic group -relationship: is_conjugate_acid_of CHEBI:64898 ! anionic amino-acid residue -relationship: is_conjugate_base_of CHEBI:58942 ! cationic amino-acid residue -relationship: is_substituent_group_from CHEBI:33709 ! amino acid +relationship: RO:0018033 CHEBI:58942 ! is deprotonated form of cationic amino-acid residue +relationship: RO:0018034 CHEBI:64898 ! is protonated form of anionic amino-acid residue +relationship: RO:0018037 CHEBI:33709 ! is substitutent group from amino acid [Term] id: CHEBI:33709 @@ -8033,97 +8428,97 @@ name: amino acid alt_id: CHEBI:13815 alt_id: CHEBI:22477 def: "A carboxylic acid containing one or more amino groups." [] -subset: 3_STAR -synonym: "amino acids" RELATED [ChEBI] -synonym: "Aminocarbonsaeure" RELATED [ChEBI] -synonym: "Aminokarbonsaeure" RELATED [ChEBI] -synonym: "Aminosaeure" RELATED [ChEBI] -xref: Wikipedia:Amino_acid +subset: 3:STAR +synonym: "amino acids" RELATED [chebi] +synonym: "Aminocarbonsaeure" RELATED [chebi] +synonym: "Aminokarbonsaeure" RELATED [chebi] +synonym: "Aminosaeure" RELATED [chebi] +xref: wikipedia.en:Amino_acid {source="wikipedia.en"} is_a: CHEBI:33575 ! carboxylic acid is_a: CHEBI:50047 ! organic amino compound -relationship: is_conjugate_acid_of CHEBI:37022 ! amino-acid anion -relationship: is_conjugate_base_of CHEBI:33703 ! amino-acid cation +relationship: RO:0018033 CHEBI:33703 ! is deprotonated form of amino-acid cation +relationship: RO:0018034 CHEBI:37022 ! is protonated form of amino-acid anion [Term] id: CHEBI:33710 name: alpha-amino-acid residue -def: "An amino-acid residue derived from an alpha-amino acid." [] -subset: 3_STAR -synonym: "alpha-amino-acid residues" RELATED [ChEBI] -synonym: "an alpha-amino acid residue" RELATED [UniProt] +def: "An amino-acid residue derived from an α-amino acid." [] +subset: 3:STAR +synonym: "alpha-amino-acid residues" RELATED [chebi] +synonym: "an alpha-amino acid residue" RELATED [uniprot_ft] is_a: CHEBI:33708 ! amino-acid residue -relationship: is_substituent_group_from CHEBI:33704 ! alpha-amino acid +relationship: RO:0018037 CHEBI:33704 ! is substitutent group from alpha-amino acid [Term] id: CHEBI:33719 name: alpha-amino-acid cation -subset: 3_STAR -synonym: "alpha-amino acid cation" RELATED [ChEBI] -synonym: "alpha-amino acid cations" RELATED [ChEBI] -synonym: "alpha-amino-acid cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "alpha-amino acid cation" RELATED [chebi] +synonym: "alpha-amino acid cations" RELATED [chebi] +synonym: "alpha-amino-acid cations" RELATED [chebi] is_a: CHEBI:33703 ! amino-acid cation -relationship: is_conjugate_acid_of CHEBI:33704 ! alpha-amino acid +relationship: RO:0018034 CHEBI:33704 ! is protonated form of alpha-amino acid [Term] id: CHEBI:33720 name: carbohydrate acid -subset: 3_STAR -synonym: "carbohydrate acid" EXACT [ChEBI] -synonym: "carbohydrate acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate acid" RELATED [chebi] +synonym: "carbohydrate acids" RELATED [chebi] is_a: CHEBI:16646 ! carbohydrate is_a: CHEBI:33575 ! carboxylic acid -relationship: is_conjugate_acid_of CHEBI:33721 ! carbohydrate acid anion +relationship: RO:0018034 CHEBI:33721 ! is protonated form of carbohydrate acid anion [Term] id: CHEBI:33721 name: carbohydrate acid anion -subset: 3_STAR -synonym: "carbohydrate acid anion" EXACT [ChEBI] -synonym: "carbohydrate acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate acid anion" RELATED [chebi] +synonym: "carbohydrate acid anions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion -relationship: is_conjugate_base_of CHEBI:33720 ! carbohydrate acid +relationship: RO:0018033 CHEBI:33720 ! is deprotonated form of carbohydrate acid [Term] id: CHEBI:33744 name: iron group molecular entity -subset: 3_STAR -synonym: "iron group molecular entities" RELATED [ChEBI] -synonym: "iron group molecular entity" EXACT [ChEBI] +subset: 3:STAR +synonym: "iron group molecular entities" RELATED [chebi] +synonym: "iron group molecular entity" RELATED [chebi] is_a: CHEBI:33676 ! d-block molecular entity relationship: has_part CHEBI:33356 ! iron group element atom [Term] id: CHEBI:33791 name: canonical nucleoside residue -subset: 3_STAR -synonym: "canonical nucleoside residues" RELATED [ChEBI] -synonym: "common nucleoside residues" RELATED [CBN] -synonym: "nucleoside residue" RELATED [CBN] -synonym: "standard nucleoside residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical nucleoside residues" RELATED [chebi] +synonym: "common nucleoside residues" RELATED [iubmb] +synonym: "nucleoside residue" RELATED [iubmb] +synonym: "standard nucleoside residues" RELATED [chebi] is_a: CHEBI:50320 ! nucleoside residue [Term] id: CHEBI:33792 name: canonical ribonucleoside residue -subset: 3_STAR -synonym: "canonical ribonucleoside residues" RELATED [ChEBI] -synonym: "common ribonucleoside residue" RELATED [CBN] -synonym: "common ribonucleoside residues" RELATED [CBN] -synonym: "N" RELATED [CBN] -synonym: "Nuc" RELATED [CBN] -synonym: "standard ribonucleoside residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical ribonucleoside residues" RELATED [chebi] +synonym: "common ribonucleoside residue" RELATED [iubmb] +synonym: "common ribonucleoside residues" RELATED [iubmb] +synonym: "N" RELATED [iubmb] +synonym: "Nuc" RELATED [iubmb] +synonym: "standard ribonucleoside residues" RELATED [chebi] is_a: CHEBI:33791 ! canonical nucleoside residue [Term] id: CHEBI:33793 name: canonical deoxyribonucleoside residue -subset: 3_STAR -synonym: "canonical deoxyribonucleoside residues" RELATED [ChEBI] -synonym: "common 2'-deoxyribonucleoside residue" RELATED [CBN] -synonym: "common 2'-deoxyribonucleoside residues" RELATED [CBN] -synonym: "dN" RELATED [CBN] -synonym: "dNuc" RELATED [CBN] -synonym: "standard deoxyribonucleoside residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical deoxyribonucleoside residues" RELATED [chebi] +synonym: "common 2'-deoxyribonucleoside residue" RELATED [iubmb] +synonym: "common 2'-deoxyribonucleoside residues" RELATED [iubmb] +synonym: "dN" RELATED [iubmb] +synonym: "dNuc" RELATED [iubmb] +synonym: "standard deoxyribonucleoside residues" RELATED [chebi] is_a: CHEBI:33791 ! canonical nucleoside residue [Term] @@ -8131,10 +8526,11 @@ id: CHEBI:33822 name: organic hydroxy compound alt_id: CHEBI:64710 def: "An organic compound having at least one hydroxy group attached to a carbon atom." [] -subset: 3_STAR -synonym: "hydroxy compounds" EXACT IUPAC_NAME [IUPAC] -synonym: "organic alcohol" RELATED [ChEBI] -synonym: "organic hydroxy compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "hydroxy compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "hydroxy compounds" RELATED IUPAC:NAME [iupac] +synonym: "organic alcohol" RELATED [chebi] +synonym: "organic hydroxy compounds" RELATED [chebi] is_a: CHEBI:24651 ! hydroxides is_a: CHEBI:50860 ! organic molecular entity @@ -8142,27 +8538,28 @@ is_a: CHEBI:50860 ! organic molecular entity id: CHEBI:33832 name: organic cyclic compound def: "Any organic molecule that consists of atoms connected in the form of a ring." [] -subset: 3_STAR -synonym: "organic cyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic cyclic compounds" RELATED [chebi] is_a: CHEBI:33595 ! cyclic compound is_a: CHEBI:72695 ! organic molecule [Term] id: CHEBI:33833 name: heteroarene -def: "A heterocyclic compound formally derived from an arene by replacement of one or more methine (-C=) and/or vinylene (-CH=CH-) groups by trivalent or divalent heteroatoms, respectively, in such a way as to maintain the continuous pi-electron system characteristic of aromatic systems and a number of out-of-plane pi-electrons corresponding to the Hueckel rule (4n+2)." [] -subset: 3_STAR -synonym: "hetarenes" RELATED [IUPAC] -synonym: "heteroarenes" EXACT IUPAC_NAME [IUPAC] +def: "A heterocyclic compound formally derived from an arene by replacement of one or more methine (‒C=) and/or vinylene (‒CH=CH‒) groups by trivalent or divalent heteroatoms, respectively, in such a way as to maintain the continuous π-electron system characteristic of aromatic systems and a number of out-of-plane π-electrons corresponding to the Hückel rule (4n+2)." [] +subset: 3:STAR +synonym: "hetarenes" RELATED [iupac] +synonym: "heteroarenes" EXACT IUPAC:NAME [IUPAC] +synonym: "heteroarenes" RELATED IUPAC:NAME [iupac] is_a: CHEBI:24532 ! organic heterocyclic compound is_a: CHEBI:33659 ! organic aromatic compound [Term] id: CHEBI:33836 name: benzenoid aromatic compound -subset: 3_STAR -synonym: "benzenoid aromatic compounds" RELATED [ChEBI] -synonym: "benzenoid compound" RELATED [ChEBI] +subset: 3:STAR +synonym: "benzenoid aromatic compounds" RELATED [chebi] +synonym: "benzenoid compound" RELATED [chebi] is_a: CHEBI:33598 ! carbocyclic compound is_a: CHEBI:33659 ! organic aromatic compound @@ -8170,10 +8567,9 @@ is_a: CHEBI:33659 ! organic aromatic compound id: CHEBI:33837 name: conjugated protein def: "Conjugated protein is a protein that contains a non-peptide component, usually in stoichiometric proportion." [] -subset: 3_STAR -synonym: "complex protein" RELATED [COMe] -synonym: "conjugated proteins" EXACT IUPAC_NAME [IUPAC] -xref: COMe:PRX000001 +subset: 3:STAR +synonym: "conjugated proteins" EXACT IUPAC:NAME [IUPAC] +synonym: "conjugated proteins" RELATED IUPAC:NAME [iupac] is_a: CHEBI:36080 ! protein [Term] @@ -8182,37 +8578,38 @@ name: nucleoside alt_id: CHEBI:13661 alt_id: CHEBI:25611 alt_id: CHEBI:7647 -def: "An N-glycosyl compound that has both a nucleobase, normally adenine, guanine, xanthine, thymine, cytosine or uracil, and either a ribose or deoxyribose as functional parents." [] -subset: 3_STAR -synonym: "a nucleoside" RELATED [UniProt] -synonym: "Nucleoside" EXACT [KEGG_COMPOUND] -synonym: "nucleosides" EXACT IUPAC_NAME [IUPAC] -synonym: "nucleosides" RELATED [ChEBI] -xref: KEGG:C00801 -xref: Wikipedia:Nucleoside +def: "An N-glycosyl compound that has both a nucleobase, normally adenine, guanine, xanthine, thymine, cytosine or uracil, and either a ribose or deoxyribose as functional parents." [] +subset: 3:STAR +synonym: "a nucleoside" RELATED [uniprot_ft] +synonym: "Nucleoside" RELATED [kegg.compound] +synonym: "nucleosides" EXACT IUPAC:NAME [IUPAC] +synonym: "nucleosides" RELATED IUPAC:NAME [chebi, iupac] +xref: kegg.compound:C00801 {source="kegg.compound"} +xref: wikipedia.en:Nucleoside {source="wikipedia.en"} is_a: CHEBI:21731 ! N-glycosyl compound is_a: CHEBI:26912 ! oxolanes is_a: CHEBI:61120 ! nucleobase-containing molecular entity -relationship: has_functional_parent CHEBI:16646 ! carbohydrate +relationship: RO:0018038 CHEBI:16646 ! has functional parent carbohydrate [Term] id: CHEBI:33839 name: macromolecule def: "A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass." [] -subset: 3_STAR -synonym: "macromolecule" EXACT IUPAC_NAME [IUPAC] -synonym: "macromolecules" RELATED [ChEBI] -synonym: "polymer" RELATED [ChEBI] -synonym: "polymer molecule" RELATED [IUPAC] -synonym: "polymers" RELATED [ChEBI] -xref: Wikipedia:Macromolecule +subset: 3:STAR +synonym: "macromolecule" EXACT IUPAC:NAME [IUPAC] +synonym: "macromolecule" RELATED IUPAC:NAME [iupac] +synonym: "macromolecules" RELATED [chebi] +synonym: "polymer" RELATED [chebi] +synonym: "polymer molecule" RELATED [iupac] +synonym: "polymers" RELATED [chebi] +xref: wikipedia.en:Macromolecule {source="wikipedia.en"} is_a: CHEBI:36357 ! polyatomic entity [Term] id: CHEBI:33842 name: aromatic annulene -subset: 3_STAR -synonym: "aromatic annulenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "aromatic annulenes" RELATED [chebi] is_a: CHEBI:33662 ! annulene is_a: CHEBI:33847 ! monocyclic arene @@ -8220,8 +8617,8 @@ is_a: CHEBI:33847 ! monocyclic arene id: CHEBI:33847 name: monocyclic arene def: "A monocyclic aromatic hydrocarbon." [] -subset: 3_STAR -synonym: "monocyclic arenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "monocyclic arenes" RELATED [chebi] is_a: CHEBI:33658 ! arene [Term] @@ -8231,15 +8628,17 @@ alt_id: CHEBI:13664 alt_id: CHEBI:13825 alt_id: CHEBI:25969 alt_id: CHEBI:2857 +alt_id: CHEBI:29322 def: "Organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring." [] -subset: 3_STAR -synonym: "a phenol" RELATED [UniProt] -synonym: "arenols" RELATED [IUPAC] -synonym: "Aryl alcohol" RELATED [KEGG_COMPOUND] -synonym: "phenols" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C15584 -xref: MetaCyc:Phenols -xref: Wikipedia:Phenols +subset: 3:STAR +synonym: "a phenol" RELATED [uniprot_ft] +synonym: "arenols" RELATED [iupac] +synonym: "Aryl alcohol" RELATED [kegg.compound] +synonym: "phenols" EXACT IUPAC:NAME [IUPAC] +synonym: "phenols" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C15584 {source="kegg.compound"} +xref: metacyc.compound:Phenols {source="metacyc.compound"} +xref: wikipedia.en:Phenols {source="wikipedia.en"} is_a: CHEBI:33659 ! organic aromatic compound is_a: CHEBI:33822 ! organic hydroxy compound @@ -8250,35 +8649,36 @@ alt_id: CHEBI:13820 alt_id: CHEBI:22623 alt_id: CHEBI:2835 def: "An amino acid whose structure includes an aromatic ring." [] -subset: 3_STAR -synonym: "Aromatic amino acid" EXACT [KEGG_COMPOUND] -synonym: "aromatic amino acids" RELATED [ChEBI] -xref: KEGG:C01021 -xref: Wikipedia:Aromatic_amino_acid +subset: 3:STAR +synonym: "Aromatic amino acid" RELATED [kegg.compound] +synonym: "aromatic amino acids" RELATED [chebi] +xref: kegg.compound:C01021 {source="kegg.compound"} +xref: wikipedia.en:Aromatic_amino_acid {source="wikipedia.en"} is_a: CHEBI:33659 ! organic aromatic compound is_a: CHEBI:33709 ! amino acid -relationship: is_conjugate_acid_of CHEBI:63473 ! aromatic amino-acid anion -relationship: is_tautomer_of CHEBI:76042 ! aromatic amino-acid zwitterion +relationship: RO:0018034 CHEBI:63473 ! is protonated form of aromatic amino-acid anion +relationship: RO:0018036 CHEBI:76042 ! is tautomer of aromatic amino-acid zwitterion [Term] id: CHEBI:33893 name: reagent def: "A substance used in a chemical reaction to detect, measure, examine, or produce other substances." [] -subset: 3_STAR -synonym: "reactif" RELATED [IUPAC] -synonym: "reactivo" RELATED [IUPAC] -synonym: "reagent" EXACT IUPAC_NAME [IUPAC] -synonym: "reagents" RELATED [ChEBI] +subset: 3:STAR +synonym: "reactif" RELATED [iupac] +synonym: "reactivo" RELATED [iupac] +synonym: "reagent" EXACT IUPAC:NAME [IUPAC] +synonym: "reagent" RELATED IUPAC:NAME [iupac] +synonym: "reagents" RELATED [chebi] is_a: CHEBI:33232 ! application [Term] id: CHEBI:33916 name: aldopentose def: "A pentose with a (potential) aldehyde group at one end." [] -subset: 3_STAR -synonym: "aldopentose" EXACT [ChEBI] -synonym: "aldopentoses" RELATED [ChEBI] -xref: PMID:10723607 {source="Europe PMC"} +subset: 3:STAR +synonym: "aldopentose" RELATED [chebi] +synonym: "aldopentoses" RELATED [chebi] +xref: pubmed:10723607 {source="pubmed"} is_a: CHEBI:15693 ! aldose is_a: CHEBI:25901 ! pentose @@ -8287,9 +8687,9 @@ id: CHEBI:33917 name: aldohexose alt_id: CHEBI:2558 def: "A hexose with a (potential) aldehyde group at one end." [] -subset: 3_STAR -synonym: "aldohexose" EXACT [ChEBI] -synonym: "aldohexoses" RELATED [ChEBI] +subset: 3:STAR +synonym: "aldohexose" RELATED [chebi] +synonym: "aldohexoses" RELATED [chebi] is_a: CHEBI:15693 ! aldose is_a: CHEBI:18133 ! hexose @@ -8297,92 +8697,97 @@ is_a: CHEBI:18133 ! hexose id: CHEBI:33937 name: macronutrient def: "Any nutrient required in large quantities by organisms throughout their life in order to orchestrate a range of physiological functions. Macronutrients are usually chemical elements (carbon, hydrogen, nitrogen, oxygen, phosphorus and sulfur) that humans consume in the largest quantities. Calcium, sodium, magnesium and potassium are sometimes included as macronutrients because they are required in relatively large quantities compared with other vitamins and minerals." [] -subset: 3_STAR -synonym: "macronutrients" RELATED [ChEBI] +subset: 3:STAR +synonym: "macronutrients" RELATED [chebi] is_a: CHEBI:33284 ! nutrient [Term] id: CHEBI:33942 name: ribose alt_id: CHEBI:26564 -def: "Any aldopentose where the open-chain form has all the hydroxy groups on the same side in the Fischer projection. Occurrs in two enantiomeric forms, D- and L-ribose, of which only the former is found in nature." [] -subset: 3_STAR -synonym: "Rib" RELATED [JCBN] -synonym: "ribo-pentose" EXACT IUPAC_NAME [IUPAC] -synonym: "ribose" EXACT IUPAC_NAME [IUPAC] +def: "Any aldopentose where the open-chain form has all the hydroxy groups on the same side in the Fischer projection. Occurrs in two enantiomeric forms, D- and L-ribose, of which only the former is found in nature." [] +subset: 3:STAR +synonym: "Rib" RELATED [jcbn] +synonym: "ribo-pentose" EXACT IUPAC:NAME [IUPAC] +synonym: "ribo-pentose" RELATED IUPAC:NAME [iupac] +synonym: "ribose" EXACT IUPAC:NAME [IUPAC] +synonym: "ribose" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33916 ! aldopentose [Term] id: CHEBI:350546 name: serotonin(1+) def: "An ammonium ion that is the conjugate acid of serotonin; major species at pH 7.3." [] -subset: 3_STAR -synonym: "2-(5-hydroxy-1H-indol-3-yl)ethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "serotonin" RELATED [UniProt] -synonym: "serotonin cation" RELATED [ChEBI] +subset: 3:STAR +synonym: "2-(5-hydroxy-1H-indol-3-yl)ethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(5-hydroxy-1H-indol-3-yl)ethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "serotonin" RELATED [uniprot_ft] +synonym: "serotonin cation" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35274 ! ammonium ion derivative -relationship: is_conjugate_acid_of CHEBI:28790 ! serotonin relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:28790 ! is protonated form of serotonin [Term] id: CHEBI:35106 name: nitrogen hydride -subset: 3_STAR -synonym: "nitrogen hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "nitrogen hydrides" RELATED [chebi] is_a: CHEBI:35881 ! pnictogen hydride is_a: CHEBI:51143 ! nitrogen molecular entity [Term] id: CHEBI:35107 name: azane -def: "Saturated acyclic nitrogen hydrides having the general formula NnHn+2." [] -subset: 3_STAR -synonym: "azanes" RELATED [ChEBI] +def: "Saturated acyclic nitrogen hydrides having the general formula NnHn+2." [] +subset: 3:STAR +synonym: "azanes" RELATED [chebi] is_a: CHEBI:35106 ! nitrogen hydride [Term] id: CHEBI:35131 name: aldose phosphate -subset: 3_STAR -synonym: "aldose phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "aldose phosphates" RELATED [chebi] is_a: CHEBI:33447 ! phospho sugar [Term] id: CHEBI:35147 name: (6'R)-beta,epsilon-carotene -subset: 3_STAR -synonym: "(+)-alpha-carotene" RELATED [ChemIDplus] -synonym: "(6'R)-beta,epsilon-carotene" EXACT IUPAC_NAME [IUPAC] -synonym: "alpha-carotene (natural)" RELATED [ChemIDplus] -xref: Beilstein:2067409 {source="Beilstein"} -xref: CAS:7488-99-5 {source="ChemIDplus"} -xref: LIPID_MAPS_instance:LMPR01070011 {source="LIPID MAPS"} +subset: 3:STAR +synonym: "(+)-alpha-carotene" RELATED [chemidplus] +synonym: "(6'R)-beta,epsilon-carotene" EXACT IUPAC:NAME [IUPAC] +synonym: "(6'R)-beta,epsilon-carotene" RELATED IUPAC:NAME [iupac] +synonym: "alpha-carotene (natural)" RELATED [chemidplus] +xref: beilstein:2067409 {source="beilstein"} +xref: cas:7488-99-5 {source="cas"} +xref: lipidmaps:LMPR01070011 {source="lipidmaps"} is_a: CHEBI:28425 ! alpha-carotene -relationship: is_enantiomer_of CHEBI:35148 ! (6'S)-beta,epsilon-carotene +relationship: RO:0018039 CHEBI:35148 ! is enantiomer of (6'S)-beta,epsilon-carotene [Term] id: CHEBI:35148 name: (6'S)-beta,epsilon-carotene -subset: 3_STAR -synonym: "(6'S)-beta,epsilon-carotene" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:2682045 {source="Beilstein"} +subset: 3:STAR +synonym: "(6'S)-beta,epsilon-carotene" EXACT IUPAC:NAME [IUPAC] +synonym: "(6'S)-beta,epsilon-carotene" RELATED IUPAC:NAME [iupac] +xref: beilstein:2682045 {source="beilstein"} is_a: CHEBI:28425 ! alpha-carotene -relationship: is_enantiomer_of CHEBI:35147 ! (6'R)-beta,epsilon-carotene +relationship: RO:0018039 CHEBI:35147 ! is enantiomer of (6'R)-beta,epsilon-carotene [Term] id: CHEBI:35155 name: elemental calcium -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:22985 ! calcium molecular entity [Term] id: CHEBI:35156 name: calcium salt -subset: 3_STAR -synonym: "calcium salts" RELATED [ChEBI] -synonym: "Kalziumsalz" RELATED [ChEBI] -synonym: "Kalziumsalze" RELATED [ChEBI] +subset: 3:STAR +synonym: "calcium salts" RELATED [chebi] +synonym: "Kalziumsalz" RELATED [chebi] +synonym: "Kalziumsalze" RELATED [chebi] is_a: CHEBI:22985 ! calcium molecular entity is_a: CHEBI:36364 ! alkaline earth salt relationship: has_part CHEBI:29108 ! calcium(2+) @@ -8390,90 +8795,92 @@ relationship: has_part CHEBI:29108 ! calcium(2+) [Term] id: CHEBI:35163 name: cyclic carotene -subset: 3_STAR -synonym: "cyclic carotene" EXACT [ChEBI] -synonym: "cyclic carotenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "cyclic carotene" RELATED [chebi] +synonym: "cyclic carotenes" RELATED [chebi] is_a: CHEBI:23042 ! carotene [Term] id: CHEBI:35186 name: terpene -def: "A hydrocarbon of biological origin having carbon skeleton formally derived from isoprene [CH2=C(CH3)CH=CH2]." [] -subset: 3_STAR -synonym: "Terpen" RELATED [ChEBI] -synonym: "terpene" EXACT [IUPAC] -synonym: "terpenes" EXACT IUPAC_NAME [IUPAC] -synonym: "terpenes" RELATED [IUPAC] -synonym: "terpeno" RELATED [IUPAC] -synonym: "terpenos" RELATED [IUPAC] +def: "A hydrocarbon of biological origin having carbon skeleton formally derived from isoprene [CH2=C(CH3)CH=CH2]." [] +subset: 3:STAR +synonym: "Terpen" RELATED [chebi] +synonym: "terpene" RELATED [iupac] +synonym: "terpenes" EXACT IUPAC:NAME [IUPAC] +synonym: "terpenes" RELATED IUPAC:NAME [iupac] +synonym: "terpeno" RELATED [iupac] +synonym: "terpenos" RELATED [iupac] is_a: CHEBI:24632 ! hydrocarbon is_a: CHEBI:24913 ! isoprenoid [Term] id: CHEBI:35189 name: sesquiterpene -def: "A C15 terpene." [] -subset: 3_STAR -synonym: "Sesquiterpen" RELATED [ChEBI] -synonym: "sesquiterpenes" EXACT IUPAC_NAME [IUPAC] -synonym: "sesquiterpenes" RELATED [IUPAC] -synonym: "sesquiterpeno" RELATED [IUPAC] -synonym: "sesquiterpenos" RELATED [IUPAC] +def: "A C15 terpene." [] +subset: 3:STAR +synonym: "Sesquiterpen" RELATED [chebi] +synonym: "sesquiterpenes" EXACT IUPAC:NAME [IUPAC] +synonym: "sesquiterpenes" RELATED IUPAC:NAME [iupac] +synonym: "sesquiterpeno" RELATED [iupac] +synonym: "sesquiterpenos" RELATED [iupac] is_a: CHEBI:35186 ! terpene [Term] id: CHEBI:35191 name: triterpene -def: "A C30 terpene." [] -subset: 3_STAR -synonym: "Triterpen" RELATED [ChEBI] -synonym: "triterpenes" EXACT IUPAC_NAME [IUPAC] -synonym: "triterpenes" RELATED [IUPAC] -synonym: "triterpeno" RELATED [IUPAC] -synonym: "triterpenos" RELATED [IUPAC] +def: "A C30 terpene." [] +subset: 3:STAR +synonym: "Triterpen" RELATED [chebi] +synonym: "triterpenes" EXACT IUPAC:NAME [IUPAC] +synonym: "triterpenes" RELATED IUPAC:NAME [iupac] +synonym: "triterpeno" RELATED [iupac] +synonym: "triterpenos" RELATED [iupac] is_a: CHEBI:35186 ! terpene [Term] id: CHEBI:35193 name: tetraterpene -def: "A C40 terpene." [] -subset: 3_STAR -synonym: "tetraterpenes" EXACT IUPAC_NAME [IUPAC] -synonym: "tetraterpenes" RELATED [IUPAC] -synonym: "tetraterpeno" RELATED [IUPAC] -synonym: "tetraterpenos" RELATED [IUPAC] +def: "A C40 terpene." [] +subset: 3:STAR +synonym: "tetraterpenes" EXACT IUPAC:NAME [IUPAC] +synonym: "tetraterpenes" RELATED IUPAC:NAME [iupac] +synonym: "tetraterpeno" RELATED [iupac] +synonym: "tetraterpenos" RELATED [iupac] is_a: CHEBI:35186 ! terpene [Term] id: CHEBI:35222 name: inhibitor def: "A substance that diminishes the rate of a chemical reaction." [] -subset: 3_STAR -synonym: "inhibidor" RELATED [ChEBI] -synonym: "inhibiteur" RELATED [ChEBI] -synonym: "inhibitor" EXACT IUPAC_NAME [IUPAC] -synonym: "inhibitors" RELATED [ChEBI] +subset: 3:STAR +synonym: "inhibidor" RELATED [chebi] +synonym: "inhibiteur" RELATED [chebi] +synonym: "inhibitor" EXACT IUPAC:NAME [IUPAC] +synonym: "inhibitor" RELATED IUPAC:NAME [iupac] +synonym: "inhibitors" RELATED [chebi] is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:35223 name: catalyst def: "A substance that increases the rate of a reaction without modifying the overall standard Gibbs energy change in the reaction." [] -subset: 3_STAR -synonym: "catalizador" RELATED [ChEBI] -synonym: "catalyseur" RELATED [ChEBI] -synonym: "catalyst" EXACT IUPAC_NAME [IUPAC] -synonym: "Katalysator" RELATED [ChEBI] +subset: 3:STAR +synonym: "catalizador" RELATED [chebi] +synonym: "catalyseur" RELATED [chebi] +synonym: "catalyst" EXACT IUPAC:NAME [IUPAC] +synonym: "catalyst" RELATED IUPAC:NAME [iupac] +synonym: "Katalysator" RELATED [chebi] is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:35238 name: amino-acid zwitterion def: "The zwitterionic form of an amino acid having a negatively charged carboxyl group and a positively charged amino group." [] -subset: 3_STAR -synonym: "amino acid zwitterion" RELATED [ChEBI] -synonym: "amino acid zwitterions" RELATED [ChEBI] -synonym: "amino-acid zwitterions" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino acid zwitterion" RELATED [chebi] +synonym: "amino acid zwitterions" RELATED [chebi] +synonym: "amino-acid zwitterions" RELATED [chebi] is_a: CHEBI:27369 ! zwitterion [Term] @@ -8481,44 +8888,46 @@ id: CHEBI:35267 name: quaternary ammonium ion alt_id: CHEBI:26470 alt_id: CHEBI:8693 -def: "A derivative of ammonium, NH4(+), in which all four of the hydrogens bonded to nitrogen have been replaced with univalent (usually organyl) groups." [] -subset: 3_STAR -synonym: "a quaternary ammonium" RELATED [UniProt] -synonym: "Quaternary amine" RELATED [KEGG_COMPOUND] -synonym: "quaternary ammonium ion" EXACT IUPAC_NAME [IUPAC] -synonym: "quaternary ammonium ions" RELATED [ChEBI] -xref: KEGG:C06703 +def: "A derivative of ammonium, NH4+, in which all four of the hydrogens bonded to nitrogen have been replaced with univalent (usually organyl) groups." [] +subset: 3:STAR +synonym: "a quaternary ammonium" RELATED [uniprot_ft] +synonym: "Quaternary amine" RELATED [kegg.compound] +synonym: "quaternary ammonium ion" EXACT IUPAC:NAME [IUPAC] +synonym: "quaternary ammonium ion" RELATED IUPAC:NAME [iupac] +synonym: "quaternary ammonium ions" RELATED [chebi] +xref: kegg.compound:C06703 {source="kegg.compound"} is_a: CHEBI:25697 ! organic cation is_a: CHEBI:35274 ! ammonium ion derivative -relationship: has_parent_hydride CHEBI:28938 ! ammonium +relationship: RO:0018040 CHEBI:28938 ! has parent hydride ammonium [Term] id: CHEBI:35274 name: ammonium ion derivative -def: "A derivative of ammonium, NH4(+), in which one (or more) of the hydrogens bonded to the nitrogen have been replaced with univalent organyl groups. The substituting carbon of the organyl group must not itself be directly attached to a heteroatom (thereby excluding protonated amides, hemiaminals, etc)." [] -subset: 3_STAR -synonym: "ammonium ion derivatives" RELATED [ChEBI] -synonym: "azanium ion derivative" RELATED [ChEBI] -synonym: "azanium ion derivatives" RELATED [ChEBI] +def: "A derivative of ammonium, NH4+, in which one (or more) of the hydrogens bonded to the nitrogen have been replaced with univalent organyl groups. The substituting carbon of the organyl group must not itself be directly attached to a heteroatom (thereby excluding protonated amides, hemiaminals, etc)." [] +subset: 3:STAR +synonym: "ammonium ion derivatives" RELATED [chebi] +synonym: "azanium ion derivative" RELATED [chebi] +synonym: "azanium ion derivatives" RELATED [chebi] is_a: CHEBI:33702 ! polyatomic cation is_a: CHEBI:51143 ! nitrogen molecular entity -relationship: has_parent_hydride CHEBI:28938 ! ammonium +relationship: RO:0018040 CHEBI:28938 ! has parent hydride ammonium [Term] id: CHEBI:35281 name: onium betaine def: "Neutral molecules having charge-separated forms with an onium atom which bears no hydrogen atoms and that is not adjacent to the anionic atom." [] -subset: 3_STAR -synonym: "betaines" EXACT IUPAC_NAME [IUPAC] -synonym: "onium betaines" RELATED [ChEBI] +subset: 3:STAR +synonym: "betaines" EXACT IUPAC:NAME [IUPAC] +synonym: "betaines" RELATED IUPAC:NAME [iupac] +synonym: "onium betaines" RELATED [chebi] is_a: CHEBI:27369 ! zwitterion [Term] id: CHEBI:35284 name: ammonium betaine def: "Any neutral molecule having charge-separated forms with a quaternary ammonium atom which bears no hydrogen atoms and that is not adjacent to the anionic atom." [] -subset: 3_STAR -synonym: "ammonium betaines" RELATED [ChEBI] +subset: 3:STAR +synonym: "ammonium betaines" RELATED [chebi] is_a: CHEBI:26469 ! quaternary nitrogen compound is_a: CHEBI:35281 ! onium betaine @@ -8529,10 +8938,10 @@ alt_id: CHEBI:13245 alt_id: CHEBI:22227 alt_id: CHEBI:2463 def: "A choline ester formed from choline and a carboxylic acid." [] -subset: 3_STAR -synonym: "acylcholines" RELATED [ChEBI] -synonym: "an acylcholine" RELATED [UniProt] -xref: KEGG:C01777 +subset: 3:STAR +synonym: "acylcholines" RELATED [chebi] +synonym: "an acylcholine" RELATED [uniprot_ft] +xref: kegg.compound:C01777 {source="kegg.compound"} is_a: CHEBI:35267 ! quaternary ammonium ion [Term] @@ -8541,13 +8950,14 @@ name: steroid alt_id: CHEBI:13687 alt_id: CHEBI:26768 alt_id: CHEBI:9263 -def: "Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[a]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from squalene which is a triterpene." [] -subset: 3_STAR -synonym: "a steroid" RELATED [UniProt] -synonym: "Steroid" EXACT [KEGG_COMPOUND] -synonym: "steroids" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C00377 -xref: MetaCyc:Steroids +def: "Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[a]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from squalene which is a triterpene." [] +subset: 3:STAR +synonym: "a steroid" RELATED [uniprot_ft] +synonym: "Steroid" RELATED [kegg.compound] +synonym: "steroids" EXACT IUPAC:NAME [IUPAC] +synonym: "steroids" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C00377 {source="kegg.compound"} +xref: metacyc.compound:Steroids {source="metacyc.compound"} is_a: CHEBI:18059 ! lipid is_a: CHEBI:51958 ! organic polycyclic compound @@ -8556,14 +8966,14 @@ id: CHEBI:35343 name: 17beta-hydroxy steroid alt_id: CHEBI:19176 alt_id: CHEBI:794 -def: "A 17-hydroxy steroid in which the hydroxy group at position 17 has a beta-configuration." [] -subset: 3_STAR -synonym: "17beta-hydroxy steroids" RELATED [ChEBI] -synonym: "17beta-hydroxysteroid" RELATED [KEGG_COMPOUND] -synonym: "17beta-hydroxysteroids" RELATED [ChEBI] -synonym: "a 17beta-hydroxy steroid" RELATED [UniProt] -xref: KEGG:C03051 -xref: MetaCyc:17-beta-Hydroxysteroids +def: "A 17-hydroxy steroid in which the hydroxy group at position 17 has a β-configuration." [] +subset: 3:STAR +synonym: "17beta-hydroxy steroids" RELATED [chebi] +synonym: "17beta-hydroxysteroid" RELATED [kegg.compound] +synonym: "17beta-hydroxysteroids" RELATED [chebi] +synonym: "a 17-beta-hydroxy steroid" RELATED [uniprot_ft] +xref: kegg.compound:C03051 {source="kegg.compound"} +xref: metacyc.compound:17-beta-Hydroxysteroids {source="metacyc.compound"} is_a: CHEBI:36838 ! 17-hydroxy steroid [Term] @@ -8572,11 +8982,11 @@ name: 21-hydroxy steroid alt_id: CHEBI:1300 alt_id: CHEBI:13596 alt_id: CHEBI:19803 -subset: 3_STAR -synonym: "21-hydroxy steroids" RELATED [ChEBI] -synonym: "21-Hydroxysteroid" RELATED [KEGG_COMPOUND] -synonym: "21-hydroxysteroids" RELATED [ChEBI] -xref: KEGG:C02506 +subset: 3:STAR +synonym: "21-hydroxy steroids" RELATED [chebi] +synonym: "21-Hydroxysteroid" RELATED [kegg.compound] +synonym: "21-hydroxysteroids" RELATED [chebi] +xref: kegg.compound:C02506 {source="kegg.compound"} is_a: CHEBI:35350 ! hydroxy steroid [Term] @@ -8585,13 +8995,13 @@ name: 11beta-hydroxy steroid alt_id: CHEBI:13774 alt_id: CHEBI:19134 alt_id: CHEBI:738 -def: "Any 11-hydroxy steroid in which the hydroxy group at position 11 has beta- configuration." [] -subset: 3_STAR -synonym: "11beta-hydroxy steroids" RELATED [ChEBI] -synonym: "11beta-Hydroxysteroid" RELATED [KEGG_COMPOUND] -synonym: "11beta-hydroxysteroids" RELATED [ChEBI] -synonym: "an 11beta-hydroxysteroid" RELATED [UniProt] -xref: KEGG:C01058 +def: "Any 11-hydroxy steroid in which the hydroxy group at position 11 has β- configuration." [] +subset: 3:STAR +synonym: "11beta-hydroxy steroids" RELATED [chebi] +synonym: "11beta-Hydroxysteroid" RELATED [kegg.compound] +synonym: "11beta-hydroxysteroids" RELATED [chebi] +synonym: "an 11-beta-hydroxysteroid" RELATED [uniprot_ft] +xref: kegg.compound:C01058 {source="kegg.compound"} is_a: CHEBI:36841 ! 11-hydroxy steroid [Term] @@ -8599,11 +9009,11 @@ id: CHEBI:35350 name: hydroxy steroid alt_id: CHEBI:24748 alt_id: CHEBI:5814 -subset: 3_STAR -synonym: "hydroxy steroids" RELATED [ChEBI] -synonym: "Hydroxysteroid" RELATED [KEGG_COMPOUND] -synonym: "hydroxysteroids" RELATED [ChEBI] -xref: KEGG:C02159 +subset: 3:STAR +synonym: "hydroxy steroids" RELATED [chebi] +synonym: "Hydroxysteroid" RELATED [kegg.compound] +synonym: "hydroxysteroids" RELATED [chebi] +xref: kegg.compound:C02159 {source="kegg.compound"} is_a: CHEBI:33822 ! organic hydroxy compound is_a: CHEBI:35341 ! steroid @@ -8611,9 +9021,10 @@ is_a: CHEBI:35341 ! steroid id: CHEBI:35352 name: organonitrogen compound def: "Any heteroorganic entity containing at least one carbon-nitrogen bond." [] -subset: 3_STAR -synonym: "organonitrogen compounds" EXACT IUPAC_NAME [IUPAC] -synonym: "organonitrogens" RELATED [ChEBI] +subset: 3:STAR +synonym: "organonitrogen compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "organonitrogen compounds" RELATED IUPAC:NAME [iupac] +synonym: "organonitrogens" RELATED [chebi] is_a: CHEBI:33285 ! heteroorganic entity is_a: CHEBI:51143 ! nitrogen molecular entity @@ -8624,39 +9035,40 @@ alt_id: CHEBI:13633 alt_id: CHEBI:24024 alt_id: CHEBI:4984 def: "Any aliphatic monocarboxylic acid derived from or contained in esterified form in an animal or vegetable fat, oil or wax. Natural fatty acids commonly have a chain of 4 to 28 carbons (usually unbranched and even-numbered), which may be saturated or unsaturated. By extension, the term is sometimes used to embrace all acyclic aliphatic carboxylic acids." [] -subset: 3_STAR -synonym: "acide gras" RELATED [ChEBI] -synonym: "acides gras" RELATED [ChemIDplus] -synonym: "acido graso" RELATED [ChEBI] -synonym: "acidos grasos" RELATED [ChEBI] -synonym: "Fatty acid" EXACT [KEGG_COMPOUND] -synonym: "fatty acids" EXACT IUPAC_NAME [IUPAC] -synonym: "fatty acids" RELATED [ChEBI] -synonym: "Fettsaeure" RELATED [ChEBI] -synonym: "Fettsaeuren" RELATED [ChEBI] -xref: KEGG:C00162 -xref: PMID:14287444 {source="Europe PMC"} -xref: PMID:14300208 {source="Europe PMC"} -xref: PMID:14328676 {source="Europe PMC"} -xref: Wikipedia:Fatty_acid +subset: 3:STAR +synonym: "acide gras" RELATED [chebi] +synonym: "acides gras" RELATED [chemidplus] +synonym: "acido graso" RELATED [chebi] +synonym: "acidos grasos" RELATED [chebi] +synonym: "Fatty acid" RELATED [kegg.compound] +synonym: "fatty acids" EXACT IUPAC:NAME [IUPAC] +synonym: "fatty acids" RELATED IUPAC:NAME [chebi, iupac] +synonym: "Fettsaeure" RELATED [chebi] +synonym: "Fettsaeuren" RELATED [chebi] +xref: kegg.compound:C00162 {source="kegg.compound"} +xref: pubmed:14287444 {source="pubmed"} +xref: pubmed:14300208 {source="pubmed"} +xref: pubmed:14328676 {source="pubmed"} +xref: wikipedia.en:Fatty_acid {source="wikipedia.en"} is_a: CHEBI:18059 ! lipid is_a: CHEBI:25384 ! monocarboxylic acid -relationship: is_conjugate_acid_of CHEBI:28868 ! fatty acid anion +relationship: RO:0018034 CHEBI:28868 ! is protonated form of fatty acid anion [Term] id: CHEBI:35381 name: monosaccharide alt_id: CHEBI:25407 alt_id: CHEBI:6984 -def: "Parent monosaccharides are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H-[CHOH]n-C(=O)[CHOH]m-H with three or more carbon atoms. The generic term 'monosaccharide' (as opposed to oligosaccharide or polysaccharide) denotes a single unit, without glycosidic connection to other such units. It includes aldoses, dialdoses, aldoketoses, ketoses and diketoses, as well as deoxy sugars, provided that the parent compound has a (potential) carbonyl group." [] -subset: 3_STAR -synonym: "monosacarido" RELATED [ChEBI] -synonym: "monosacaridos" RELATED [IUPAC] -synonym: "Monosaccharid" RELATED [ChEBI] -synonym: "Monosaccharide" EXACT [KEGG_COMPOUND] -synonym: "monosaccharides" EXACT IUPAC_NAME [IUPAC] -synonym: "Monosacharid" RELATED [ChEBI] -xref: KEGG:C06698 +def: "Parent monosaccharides are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H‒[CHOH]n‒C(=O)[CHOH]m‒H with three or more carbon atoms. The generic term 'monosaccharide' (as opposed to oligosaccharide or polysaccharide) denotes a single unit, without glycosidic connection to other such units. It includes aldoses, dialdoses, aldoketoses, ketoses and diketoses, as well as deoxy sugars, provided that the parent compound has a (potential) carbonyl group." [] +subset: 3:STAR +synonym: "monosacarido" RELATED [chebi] +synonym: "monosacaridos" RELATED [iupac] +synonym: "Monosaccharid" RELATED [chebi] +synonym: "Monosaccharide" RELATED [kegg.compound] +synonym: "monosaccharides" EXACT IUPAC:NAME [IUPAC] +synonym: "monosaccharides" RELATED IUPAC:NAME [iupac] +synonym: "Monosacharid" RELATED [chebi] +xref: kegg.compound:C06698 {source="kegg.compound"} is_a: CHEBI:16646 ! carbohydrate [Term] @@ -8665,58 +9077,58 @@ name: oxoanion alt_id: CHEBI:33274 alt_id: CHEBI:33436 def: "An oxoanion is an anion derived from an oxoacid by loss of hydron(s) bound to oxygen." [] -subset: 3_STAR -synonym: "oxoacid anions" RELATED [ChEBI] -synonym: "oxoanion" EXACT [ChEBI] -synonym: "oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxoacid anions" RELATED [chebi] +synonym: "oxoanion" RELATED [chebi] +synonym: "oxoanions" RELATED [chebi] is_a: CHEBI:25741 ! oxide is_a: CHEBI:33273 ! polyatomic anion [Term] id: CHEBI:35416 name: alpha-amino-acid residue anion -subset: 3_STAR -synonym: "alpha-amino-acid residue anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "alpha-amino-acid residue anions" RELATED [chebi] is_a: CHEBI:64898 ! anionic amino-acid residue [Term] id: CHEBI:35441 name: antiinfective agent def: "A substance used in the prophylaxis or therapy of infectious diseases." [] -subset: 3_STAR -synonym: "anti-infective agents" RELATED [ChEBI] -synonym: "anti-infective drugs" RELATED [ChEBI] -synonym: "antiinfective agents" RELATED [ChEBI] -synonym: "antiinfective drug" RELATED [ChEBI] +subset: 3:STAR +synonym: "anti-infective agents" RELATED [chebi] +synonym: "anti-infective drugs" RELATED [chebi] +synonym: "antiinfective agents" RELATED [chebi] +synonym: "antiinfective drug" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:35470 name: central nervous system drug def: "A class of drugs producing both physiological and psychological effects through a variety of mechanisms involving the central nervous system." [] -subset: 3_STAR -synonym: "central nervous system agents" RELATED [ChEBI] -synonym: "CNS agent" RELATED [ChEBI] -synonym: "CNS drugs" RELATED [ChEBI] +subset: 3:STAR +synonym: "central nervous system agents" RELATED [chebi] +synonym: "CNS agent" RELATED [chebi] +synonym: "CNS drugs" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:35472 name: anti-inflammatory drug def: "A substance that reduces or suppresses inflammation." [] -subset: 3_STAR -synonym: "anti-inflammatory drugs" RELATED [ChEBI] -synonym: "antiinflammatory agent" RELATED [ChEBI] -synonym: "antiinflammatory drug" RELATED [ChEBI] -synonym: "antiinflammatory drugs" RELATED [ChEBI] +subset: 3:STAR +synonym: "anti-inflammatory drugs" RELATED [chebi] +synonym: "antiinflammatory agent" RELATED [chebi] +synonym: "antiinflammatory drug" RELATED [chebi] +synonym: "antiinflammatory drugs" RELATED [chebi] is_a: CHEBI:23888 ! drug is_a: CHEBI:67079 ! anti-inflammatory agent [Term] id: CHEBI:35479 name: alkali metal salt -subset: 3_STAR -synonym: "alkali metal salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkali metal salts" RELATED [chebi] is_a: CHEBI:24866 ! salt is_a: CHEBI:33296 ! alkali metal molecular entity @@ -8724,7 +9136,7 @@ is_a: CHEBI:33296 ! alkali metal molecular entity id: CHEBI:35480 name: analgesic def: "An agent capable of relieving pain without the loss of consciousness or without producing anaesthesia. In addition, analgesic is a role played by a compound which is exhibited by a capability to cause a reduction of pain symptoms." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:23888 ! drug is_a: CHEBI:52210 ! pharmacological role @@ -8732,51 +9144,54 @@ is_a: CHEBI:52210 ! pharmacological role id: CHEBI:35488 name: central nervous system depressant def: "A loosely defined group of drugs that tend to reduce the activity of the central nervous system." [] -subset: 3_STAR -synonym: "central nervous system depressants" RELATED [ChEBI] -synonym: "CNS depressants" RELATED [ChEBI] +subset: 3:STAR +synonym: "central nervous system depressants" RELATED [chebi] +synonym: "CNS depressants" RELATED [chebi] is_a: CHEBI:35470 ! central nervous system drug [Term] id: CHEBI:35507 name: natural product fundamental parent -subset: 3_STAR -synonym: "natural product fundamental parents" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "natural product fundamental parents" EXACT IUPAC:NAME [IUPAC] +synonym: "natural product fundamental parents" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33245 ! organic fundamental parent [Term] id: CHEBI:35508 name: steroid fundamental parent -subset: 3_STAR -synonym: "steroid fundamental parents" RELATED [ChEBI] +subset: 3:STAR +synonym: "steroid fundamental parents" RELATED [chebi] is_a: CHEBI:35341 ! steroid is_a: CHEBI:35507 ! natural product fundamental parent [Term] id: CHEBI:35509 name: androstane -subset: 3_STAR -synonym: "androstane" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:5247532 {source="Beilstein"} -xref: CAS:24887-75-0 {source="ChemIDplus"} -xref: LIPID_MAPS_instance:LMST02020000 {source="LIPID MAPS"} +subset: 3:STAR +synonym: "androstane" EXACT IUPAC:NAME [IUPAC] +synonym: "androstane" RELATED IUPAC:NAME [iupac] +xref: beilstein:5247532 {source="beilstein"} +xref: cas:24887-75-0 {source="cas"} +xref: lipidmaps:LMST02020000 {source="lipidmaps"} is_a: CHEBI:35508 ! steroid fundamental parent [Term] id: CHEBI:35519 name: cholane -subset: 3_STAR -synonym: "cholane" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "cholane" EXACT IUPAC:NAME [IUPAC] +synonym: "cholane" RELATED IUPAC:NAME [iupac] is_a: CHEBI:35508 ! steroid fundamental parent [Term] id: CHEBI:35522 name: beta-adrenergic agonist -def: "An agent that selectively binds to and activates beta-adrenergic receptors." [] -subset: 3_STAR -synonym: "beta-adrenergic agonists" RELATED [ChEBI] -synonym: "beta-adrenergic receptor agonist" RELATED [ChEBI] -synonym: "beta-adrenoceptor agonists" RELATED [IUPHAR] +def: "An agent that selectively binds to and activates β-adrenergic receptors." [] +subset: 3:STAR +synonym: "beta-adrenergic agonists" RELATED [chebi] +synonym: "beta-adrenergic receptor agonist" RELATED [chebi] +synonym: "beta-adrenoceptor agonists" RELATED [iuphar] is_a: CHEBI:37886 ! adrenergic agonist is_a: CHEBI:48540 ! beta-adrenergic drug @@ -8784,85 +9199,87 @@ is_a: CHEBI:48540 ! beta-adrenergic drug id: CHEBI:35523 name: bronchodilator agent def: "An agent that causes an increase in the expansion of a bronchus or bronchial tubes." [] -subset: 3_STAR -synonym: "bronchodilator" RELATED [ChEBI] -synonym: "bronchodilator agents" RELATED [ChEBI] -synonym: "broncholytic agent" RELATED [ChEBI] +subset: 3:STAR +synonym: "bronchodilator" RELATED [chebi] +synonym: "bronchodilator agents" RELATED [chebi] +synonym: "broncholytic agent" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:35524 name: sympathomimetic agent def: "A drug that mimics the effects of stimulating postganglionic adrenergic sympathetic nerves. Included in this class are drugs that directly stimulate adrenergic receptors and drugs that act indirectly by provoking the release of adrenergic transmitters." [] -subset: 3_STAR -synonym: "sympathomimetic" RELATED [ChEBI] -synonym: "sympathomimetics" RELATED [ChEBI] +subset: 3:STAR +synonym: "sympathomimetic" RELATED [chebi] +synonym: "sympathomimetics" RELATED [chebi] is_a: CHEBI:37962 ! adrenergic agent [Term] id: CHEBI:35552 name: heterocyclic organic fundamental parent -subset: 3_STAR -synonym: "heterocyclic fundamental parent" RELATED [ChEBI] -synonym: "heterocyclic organic fundamental parents" RELATED [ChEBI] -synonym: "heterocyclic parent hydrides" EXACT IUPAC_NAME [IUPAC] -synonym: "organic heterocyclic fundamental parents" RELATED [ChEBI] +subset: 3:STAR +synonym: "heterocyclic fundamental parent" RELATED [chebi] +synonym: "heterocyclic organic fundamental parents" RELATED [chebi] +synonym: "heterocyclic parent hydrides" EXACT IUPAC:NAME [IUPAC] +synonym: "heterocyclic parent hydrides" RELATED IUPAC:NAME [iupac] +synonym: "organic heterocyclic fundamental parents" RELATED [chebi] is_a: CHEBI:33245 ! organic fundamental parent [Term] id: CHEBI:35554 name: cardiovascular drug def: "A drug that affects the rate or intensity of cardiac contraction, blood vessel diameter or blood volume." [] -subset: 3_STAR -synonym: "cardiovascular agent" RELATED [ChEBI] -synonym: "cardiovascular drugs" RELATED [ChEBI] +subset: 3:STAR +synonym: "cardiovascular agent" RELATED [chebi] +synonym: "cardiovascular drugs" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:35568 name: mancude ring def: "Any molecular entity that consists of a ring having (formally) the maximum number of noncumulative double bonds." [] -subset: 3_STAR -synonym: "mancude rings" RELATED [ChEBI] -synonym: "mancude-ring systems" EXACT IUPAC_NAME [IUPAC] -synonym: "mancunide-ring systems" RELATED [IUPAC] +subset: 3:STAR +synonym: "mancude rings" RELATED [chebi] +synonym: "mancude-ring systems" EXACT IUPAC:NAME [IUPAC] +synonym: "mancude-ring systems" RELATED IUPAC:NAME [iupac] +synonym: "mancunide-ring systems" RELATED [iupac] is_a: CHEBI:23367 ! molecular entity [Term] id: CHEBI:35569 name: alpha-adrenergic agonist -def: "An agent that selectively binds to and activates alpha-adrenergic receptors." [] -subset: 3_STAR -synonym: "alpha-adrenergic agonists" RELATED [ChEBI] -synonym: "alpha-adrenergic receptor agonist" RELATED [ChEBI] -synonym: "alpha-adrenoceptor agonists" RELATED [IUPHAR] +def: "An agent that selectively binds to and activates α-adrenergic receptors." [] +subset: 3:STAR +synonym: "alpha-adrenergic agonists" RELATED [chebi] +synonym: "alpha-adrenergic receptor agonist" RELATED [chebi] +synonym: "alpha-adrenoceptor agonists" RELATED [iuphar] is_a: CHEBI:37886 ! adrenergic agonist is_a: CHEBI:48539 ! alpha-adrenergic drug [Term] id: CHEBI:35570 name: mancude organic heterobicyclic parent -subset: 3_STAR -synonym: "mancude organic heterobicyclic parents" RELATED [ChEBI] -synonym: "mancude-ring organic heterobicyclic parents" RELATED [ChEBI] +subset: 3:STAR +synonym: "mancude organic heterobicyclic parents" RELATED [chebi] +synonym: "mancude-ring organic heterobicyclic parents" RELATED [chebi] is_a: CHEBI:27171 ! organic heterobicyclic compound is_a: CHEBI:35571 ! mancude organic heterocyclic parent [Term] id: CHEBI:35571 name: mancude organic heterocyclic parent -subset: 3_STAR -synonym: "mancude organic heterocyclic parents" RELATED [ChEBI] -synonym: "mancude-ring organic heterocyclic parents" RELATED [ChEBI] +subset: 3:STAR +synonym: "mancude organic heterocyclic parents" RELATED [chebi] +synonym: "mancude-ring organic heterocyclic parents" RELATED [chebi] is_a: CHEBI:35552 ! heterocyclic organic fundamental parent is_a: CHEBI:35573 ! organic mancude parent [Term] id: CHEBI:35573 name: organic mancude parent -subset: 3_STAR -synonym: "organic mancude parents" RELATED [ChEBI] -synonym: "organic mancude-ring parents" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic mancude parents" RELATED [chebi] +synonym: "organic mancude-ring parents" RELATED [chebi] is_a: CHEBI:33245 ! organic fundamental parent is_a: CHEBI:35568 ! mancude ring @@ -8870,13 +9287,14 @@ is_a: CHEBI:35568 ! mancude ring id: CHEBI:35584 name: purine def: "A heterobicyclic aromatic organic compound comprising a pyrimidine ring fused to an imidazole ring; the parent compound of the purines." [] -subset: 3_STAR -synonym: "purine" EXACT IUPAC_NAME [IUPAC] -xref: HMDB:HMDB0001366 -xref: KEGG:C15587 -xref: MetaCyc:PURINE -xref: PMID:12865945 {source="Europe PMC"} -xref: PMID:24088627 {source="Europe PMC"} +subset: 3:STAR +synonym: "purine" EXACT IUPAC:NAME [IUPAC] +synonym: "purine" RELATED IUPAC:NAME [iupac] +xref: hmdb:HMDB0001366 {source="hmdb"} +xref: kegg.compound:C15587 {source="kegg.compound"} +xref: metacyc.compound:PURINE {source="metacyc.compound"} +xref: pubmed:12865945 {source="pubmed"} +xref: pubmed:24088627 {source="pubmed"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:26401 ! purines is_a: CHEBI:35570 ! mancude organic heterobicyclic parent @@ -8885,54 +9303,56 @@ relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite [Term] id: CHEBI:35586 name: 1H-purine -def: "The 1H-tautomer of purine." [] -subset: 3_STAR -synonym: "1H-purine" EXACT [ChEBI] -xref: Gmelin:2379911 {source="Gmelin"} +def: "The 1H-tautomer of purine." [] +subset: 3:STAR +synonym: "1H-purine" RELATED [chebi] +xref: gmelin:2379911 {source="gmelin"} is_a: CHEBI:35584 ! purine -relationship: is_tautomer_of CHEBI:17258 ! 7H-purine -relationship: is_tautomer_of CHEBI:35588 ! 3H-purine -relationship: is_tautomer_of CHEBI:35589 ! 9H-purine +relationship: RO:0018036 CHEBI:17258 ! is tautomer of 7H-purine +relationship: RO:0018036 CHEBI:35588 ! is tautomer of 3H-purine +relationship: RO:0018036 CHEBI:35589 ! is tautomer of 9H-purine [Term] id: CHEBI:35588 name: 3H-purine -def: "The 3H-tautomer of purine." [] -subset: 3_STAR -synonym: "3H-purine" EXACT IUPAC_NAME [IUPAC] -xref: PMID:6149478 {source="Europe PMC"} -xref: PMID:7178185 {source="Europe PMC"} -xref: PMID:7296170 {source="Europe PMC"} -xref: Reaxys:1210196 {source="Reaxys"} +def: "The 3H-tautomer of purine." [] +subset: 3:STAR +synonym: "3H-purine" EXACT IUPAC:NAME [IUPAC] +synonym: "3H-purine" RELATED IUPAC:NAME [iupac] +xref: pubmed:6149478 {source="pubmed"} +xref: pubmed:7178185 {source="pubmed"} +xref: pubmed:7296170 {source="pubmed"} +xref: reaxys:1210196 {source="reaxys"} is_a: CHEBI:35584 ! purine -relationship: is_tautomer_of CHEBI:17258 ! 7H-purine -relationship: is_tautomer_of CHEBI:35586 ! 1H-purine -relationship: is_tautomer_of CHEBI:35589 ! 9H-purine +relationship: RO:0018036 CHEBI:17258 ! is tautomer of 7H-purine +relationship: RO:0018036 CHEBI:35586 ! is tautomer of 1H-purine +relationship: RO:0018036 CHEBI:35589 ! is tautomer of 9H-purine [Term] id: CHEBI:35589 name: 9H-purine -def: "The 9H-tautomer of purine." [] -subset: 3_STAR -synonym: "9H-purine" EXACT IUPAC_NAME [IUPAC, UniProt] -xref: Beilstein:606899 {source="Beilstein"} -xref: CAS:120-73-0 {source="NIST Chemistry WebBook"} -xref: Gmelin:3120 {source="Gmelin"} -xref: Wikipedia:Purine +def: "The 9H-tautomer of purine." [] +subset: 3:STAR +synonym: "9H-purine" EXACT IUPAC:NAME [IUPAC] +synonym: "9H-purine" RELATED IUPAC:NAME [iupac, uniprot_ft] +xref: beilstein:606899 {source="beilstein"} +xref: cas:120-73-0 {source="cas"} +xref: gmelin:3120 {source="gmelin"} +xref: wikipedia.en:Purine {source="wikipedia.en"} is_a: CHEBI:35584 ! purine -relationship: is_tautomer_of CHEBI:17258 ! 7H-purine -relationship: is_tautomer_of CHEBI:35586 ! 1H-purine -relationship: is_tautomer_of CHEBI:35588 ! 3H-purine +relationship: RO:0018036 CHEBI:17258 ! is tautomer of 7H-purine +relationship: RO:0018036 CHEBI:35586 ! is tautomer of 1H-purine +relationship: RO:0018036 CHEBI:35588 ! is tautomer of 3H-purine [Term] id: CHEBI:35604 name: carbon oxoanion -def: "A negative ion consisting solely of carbon and oxygen atoms, and therefore having the general formula CxOy(n-) for some integers x, y and n." [] -subset: 3_STAR -synonym: "carbon oxoanion" EXACT [ChEBI] -synonym: "carbon oxoanions" RELATED [ChEBI] -synonym: "oxocarbon anion" RELATED [ChEBI] -synonym: "oxocarbon anions" RELATED [ChEBI] +def: "A negative ion consisting solely of carbon and oxygen atoms, and therefore having the general formula CxOyn− for some integers x, y and n." [] +subset: 3:STAR +synonym: "carbon oxoanion" RELATED [chebi] +synonym: "carbon oxoanions" RELATED [chebi] +synonym: "oxocarbon anion" RELATED [chebi] +synonym: "oxocarbon anions" RELATED [chebi] is_a: CHEBI:25696 ! organic anion is_a: CHEBI:35406 ! oxoanion is_a: CHEBI:36963 ! organooxygen compound @@ -8940,9 +9360,9 @@ is_a: CHEBI:36963 ! organooxygen compound [Term] id: CHEBI:35605 name: carbon oxoacid -subset: 3_STAR -synonym: "carbon oxoacids" RELATED [ChEBI] -synonym: "oxoacids of carbon" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbon oxoacids" RELATED [chebi] +synonym: "oxoacids of carbon" RELATED [chebi] is_a: CHEBI:24833 ! oxoacid is_a: CHEBI:36963 ! organooxygen compound @@ -8950,31 +9370,31 @@ is_a: CHEBI:36963 ! organooxygen compound id: CHEBI:35620 name: vasodilator agent def: "A drug used to cause dilation of the blood vessels." [] -subset: 3_STAR -synonym: "vasodilator" RELATED [ChEBI] -synonym: "vasodilator agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "vasodilator" RELATED [chebi] +synonym: "vasodilator agents" RELATED [chebi] is_a: CHEBI:35554 ! cardiovascular drug [Term] id: CHEBI:35623 name: anticonvulsant def: "A drug used to prevent seizures or reduce their severity." [] -subset: 3_STAR -synonym: "anti-convulsant" RELATED [ChEBI] -synonym: "anti-convulsants" RELATED [ChEBI] -synonym: "anti-convulsive agent" RELATED [ChEBI] -synonym: "anti-convulsive agents" RELATED [ChEBI] -synonym: "anticonvulsants" RELATED [ChEBI] -synonym: "anticonvulsive agent" RELATED [ChEBI] -synonym: "anticonvulsive agents" RELATED [ChEBI] -synonym: "antiepileptic" RELATED [ChEBI] -synonym: "antiepileptics" RELATED [ChEBI] -synonym: "Antiepileptika" RELATED [ChEBI] -synonym: "Antiepileptikum" RELATED [ChEBI] -synonym: "antiepileptique" RELATED [ChEBI] -synonym: "antiepileptiques" RELATED [ChEBI] -synonym: "Antikonvulsiva" RELATED [ChEBI] -synonym: "Antikonvulsivum" RELATED [ChEBI] +subset: 3:STAR +synonym: "anti-convulsant" RELATED [chebi] +synonym: "anti-convulsants" RELATED [chebi] +synonym: "anti-convulsive agent" RELATED [chebi] +synonym: "anti-convulsive agents" RELATED [chebi] +synonym: "anticonvulsants" RELATED [chebi] +synonym: "anticonvulsive agent" RELATED [chebi] +synonym: "anticonvulsive agents" RELATED [chebi] +synonym: "antiepileptic" RELATED [chebi] +synonym: "antiepileptics" RELATED [chebi] +synonym: "Antiepileptika" RELATED [chebi] +synonym: "Antiepileptikum" RELATED [chebi] +synonym: "antiepileptique" RELATED [chebi] +synonym: "antiepileptiques" RELATED [chebi] +synonym: "Antikonvulsiva" RELATED [chebi] +synonym: "Antikonvulsivum" RELATED [chebi] is_a: CHEBI:35488 ! central nervous system depressant [Term] @@ -8984,64 +9404,64 @@ alt_id: CHEBI:23692 alt_id: CHEBI:36172 alt_id: CHEBI:4501 def: "Any carboxylic acid containing two carboxy groups." [] -subset: 3_STAR -synonym: "Dicarboxylic acid" EXACT [KEGG_COMPOUND] -synonym: "dicarboxylic acids" RELATED [ChEBI] -xref: KEGG:C02028 +subset: 3:STAR +synonym: "Dicarboxylic acid" RELATED [kegg.compound] +synonym: "dicarboxylic acids" RELATED [chebi] +xref: kegg.compound:C02028 {source="kegg.compound"} is_a: CHEBI:131927 ! dicarboxylic acids and O-substituted derivatives is_a: CHEBI:33575 ! carboxylic acid -relationship: is_conjugate_acid_of CHEBI:35693 ! dicarboxylic acid anion +relationship: RO:0018034 CHEBI:35693 ! is protonated form of dicarboxylic acid anion [Term] id: CHEBI:35693 name: dicarboxylic acid anion -subset: 3_STAR -synonym: "dicarboxylic acid anion" EXACT [ChEBI] -synonym: "dicarboxylic acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "dicarboxylic acid anion" RELATED [chebi] +synonym: "dicarboxylic acid anions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion -relationship: is_conjugate_base_of CHEBI:35692 ! dicarboxylic acid +relationship: RO:0018033 CHEBI:35692 ! is deprotonated form of dicarboxylic acid [Term] id: CHEBI:35701 name: ester alt_id: CHEBI:23960 alt_id: CHEBI:4859 -def: "A compound formally derived from an oxoacid RkE(=O)l(OH)m (l > 0) and an alcohol, phenol, heteroarenol, or enol by linking with formal loss of water from an acidic hydroxy group of the former and a hydroxy group of the latter." [] -subset: 3_STAR -synonym: "Ester" EXACT [KEGG_COMPOUND] -synonym: "esters" RELATED [ChEBI] -xref: KEGG:C00287 -xref: Wikipedia:Ester +def: "A compound formally derived from an oxoacid RkE(=O)l(OH)m (l > 0) and an alcohol, phenol, heteroarenol, or enol by linking with formal loss of water from an acidic hydroxy group of the former and a hydroxy group of the latter." [] +subset: 3:STAR +synonym: "Ester" RELATED [kegg.compound] +synonym: "esters" RELATED [chebi] +xref: kegg.compound:C00287 {source="kegg.compound"} +xref: wikipedia.en:Ester {source="wikipedia.en"} is_a: CHEBI:36963 ! organooxygen compound [Term] id: CHEBI:35718 name: antifungal agent def: "An antimicrobial agent that destroys fungi by suppressing their ability to grow or reproduce." [] -subset: 3_STAR -synonym: "antifungal" RELATED [ChEBI] -synonym: "antifungal agents" RELATED [ChEBI] -synonym: "antifungal drug" RELATED [ChEBI] -synonym: "antifungal drugs" RELATED [ChEBI] -synonym: "antifungals" RELATED [ChEBI] +subset: 3:STAR +synonym: "antifungal" RELATED [chebi] +synonym: "antifungal agents" RELATED [chebi] +synonym: "antifungal drug" RELATED [chebi] +synonym: "antifungal drugs" RELATED [chebi] +synonym: "antifungals" RELATED [chebi] is_a: CHEBI:33281 ! antimicrobial agent [Term] id: CHEBI:35722 name: sulfated glycosaminoglycan -subset: 3_STAR -synonym: "glycosaminoglycan sulfate" RELATED [ChEBI] -synonym: "glycosaminoglycan sulfates" RELATED [ChEBI] -synonym: "sulfated glycosaminoglycans" RELATED [ChEBI] +subset: 3:STAR +synonym: "glycosaminoglycan sulfate" RELATED [chebi] +synonym: "glycosaminoglycan sulfates" RELATED [chebi] +synonym: "sulfated glycosaminoglycans" RELATED [chebi] is_a: CHEBI:18085 ! glycosaminoglycan is_a: CHEBI:35724 ! carbohydrate sulfate [Term] id: CHEBI:35724 name: carbohydrate sulfate -subset: 3_STAR -synonym: "carbohydrate sulfates" RELATED [ChEBI] -synonym: "carbohydrate sulphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate sulfates" RELATED [chebi] +synonym: "carbohydrate sulphates" RELATED [chebi] is_a: CHEBI:25704 ! organic sulfate is_a: CHEBI:26819 ! sulfuric ester is_a: CHEBI:63299 ! carbohydrate derivative @@ -9049,8 +9469,8 @@ is_a: CHEBI:63299 ! carbohydrate derivative [Term] id: CHEBI:35740 name: liposaccharide -subset: 3_STAR -synonym: "liposaccharides" RELATED [ChEBI] +subset: 3:STAR +synonym: "liposaccharides" RELATED [chebi] is_a: CHEBI:18059 ! lipid is_a: CHEBI:63299 ! carbohydrate derivative @@ -9061,36 +9481,36 @@ alt_id: CHEBI:13657 alt_id: CHEBI:25382 alt_id: CHEBI:3407 def: "A carboxylic acid anion formed when the carboxy group of a monocarboxylic acid is deprotonated." [] -subset: 3_STAR -synonym: "a monocarboxylate" RELATED [UniProt] -synonym: "Carboxylate" RELATED [KEGG_COMPOUND] -synonym: "Monocarboxylate" RELATED [KEGG_COMPOUND] -synonym: "monocarboxylates" RELATED [ChEBI] -synonym: "monocarboxylic acid anions" RELATED [ChEBI] -xref: KEGG:C00060 +subset: 3:STAR +synonym: "a monocarboxylate" RELATED [uniprot_ft] +synonym: "Carboxylate" RELATED [kegg.compound] +synonym: "Monocarboxylate" RELATED [kegg.compound] +synonym: "monocarboxylates" RELATED [chebi] +synonym: "monocarboxylic acid anions" RELATED [chebi] +xref: kegg.compound:C00060 {source="kegg.compound"} is_a: CHEBI:29067 ! carboxylic acid anion -relationship: is_conjugate_base_of CHEBI:25384 ! monocarboxylic acid +relationship: RO:0018033 CHEBI:25384 ! is deprotonated form of monocarboxylic acid [Term] id: CHEBI:35780 name: phosphate ion def: "A phosphorus oxoanion that is the conjugate base of phosphoric acid." [] -subset: 3_STAR -synonym: "phosphate" RELATED [ChEBI] -synonym: "phosphate ions" RELATED [ChEBI] -synonym: "Pi" RELATED [ChEBI] +subset: 3:STAR +synonym: "phosphate" RELATED [chebi] +synonym: "phosphate ions" RELATED [chebi] +synonym: "Pi" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33461 ! phosphorus oxoanion -relationship: is_conjugate_base_of CHEBI:26078 ! phosphoric acid relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:26078 ! is deprotonated form of phosphoric acid [Term] id: CHEBI:35786 name: phosphosphingolipid -subset: 3_STAR -synonym: "phosphosphingolipids" RELATED [ChEBI] -synonym: "sphingophospholipid" RELATED [ChEBI] -synonym: "sphingophospholipids" RELATED [ChEBI] +subset: 3:STAR +synonym: "phosphosphingolipids" RELATED [chebi] +synonym: "sphingophospholipid" RELATED [chebi] +synonym: "sphingophospholipids" RELATED [chebi] is_a: CHEBI:16247 ! phospholipid is_a: CHEBI:26739 ! sphingolipid @@ -9099,27 +9519,27 @@ id: CHEBI:35789 name: oxo steroid alt_id: CHEBI:24979 alt_id: CHEBI:25804 -subset: 3_STAR -synonym: "keto steroids" RELATED [ChEBI] -synonym: "ketosteroids" RELATED [ChEBI] -synonym: "oxo steroids" RELATED [ChEBI] -synonym: "oxosteroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "keto steroids" RELATED [chebi] +synonym: "ketosteroids" RELATED [chebi] +synonym: "oxo steroids" RELATED [chebi] +synonym: "oxosteroids" RELATED [chebi] is_a: CHEBI:17087 ! ketone is_a: CHEBI:35341 ! steroid [Term] id: CHEBI:35794 name: tetrapyrrole fundamental parent -subset: 3_STAR -synonym: "tetrapyrrole fundamental parents" RELATED [ChEBI] +subset: 3:STAR +synonym: "tetrapyrrole fundamental parents" RELATED [chebi] is_a: CHEBI:26932 ! tetrapyrrole is_a: CHEBI:35507 ! natural product fundamental parent [Term] id: CHEBI:35875 name: imidazopyrimidine -subset: 3_STAR -synonym: "imidazopyrimidines" RELATED [ChEBI] +subset: 3:STAR +synonym: "imidazopyrimidines" RELATED [chebi] is_a: CHEBI:27171 ! organic heterobicyclic compound is_a: CHEBI:33833 ! heteroarene is_a: CHEBI:38101 ! organonitrogen heterocyclic compound @@ -9127,9 +9547,9 @@ is_a: CHEBI:38101 ! organonitrogen heterocyclic compound [Term] id: CHEBI:35881 name: pnictogen hydride -subset: 3_STAR -synonym: "pnictogen hydride" EXACT [ChEBI] -synonym: "pnictogen hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "pnictogen hydride" RELATED [chebi] +synonym: "pnictogen hydrides" RELATED [chebi] is_a: CHEBI:33242 ! inorganic hydride is_a: CHEBI:33302 ! pnictogen molecular entity @@ -9137,17 +9557,17 @@ is_a: CHEBI:33302 ! pnictogen molecular entity id: CHEBI:35903 name: oxo carboxylic acid anion def: "Any carboxylic acid anion containing at least one oxo group." [] -subset: 3_STAR -synonym: "oxo carboxylic acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxo carboxylic acid anions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion -relationship: is_conjugate_base_of CHEBI:25754 ! oxo carboxylic acid +relationship: RO:0018033 CHEBI:25754 ! is deprotonated form of oxo carboxylic acid [Term] id: CHEBI:35942 name: neurotransmitter agent def: "A substance used for its pharmacological action on any aspect of neurotransmitter systems. Neurotransmitter agents include agonists, antagonists, degradation inhibitors, uptake inhibitors, depleters, precursors, and modulators of receptor function." [] -subset: 3_STAR -synonym: "neurotransmitter agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "neurotransmitter agents" RELATED [chebi] is_a: CHEBI:23888 ! drug is_a: CHEBI:52210 ! pharmacological role @@ -9156,12 +9576,12 @@ id: CHEBI:36078 name: cholanoid alt_id: CHEBI:22867 alt_id: CHEBI:50419 -subset: 3_STAR -synonym: "bile acids and derivatives" RELATED [LIPID_MAPS] -synonym: "cholanoids" RELATED [ChEBI] -xref: LIPID_MAPS_class:LMST04 {source="LIPID MAPS"} +subset: 3:STAR +synonym: "bile acids and derivatives" RELATED [lipidmaps] +synonym: "cholanoids" RELATED [chebi] +xref: lipidmaps_class:LMST04 {source="lipidmaps_class"} is_a: CHEBI:35341 ! steroid -relationship: has_parent_hydride CHEBI:35519 ! cholane +relationship: RO:0018040 CHEBI:35519 ! has parent hydride cholane [Term] id: CHEBI:36080 @@ -9169,8 +9589,9 @@ name: protein alt_id: CHEBI:13677 alt_id: CHEBI:14911 def: "A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome." [] -subset: 3_STAR -synonym: "proteins" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "proteins" EXACT IUPAC:NAME [IUPAC] +synonym: "proteins" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33695 ! information biomacromolecule relationship: has_part CHEBI:16541 ! protein polypeptide chain @@ -9178,17 +9599,17 @@ relationship: has_part CHEBI:16541 ! protein polypeptide chain id: CHEBI:36145 name: oxo dicarboxylic acid def: "Any dicarboxylic acid carrying one or more oxo groups." [] -subset: 3_STAR -synonym: "oxo dicarboxylic acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxo dicarboxylic acids" RELATED [chebi] is_a: CHEBI:25754 ! oxo carboxylic acid is_a: CHEBI:35692 ! dicarboxylic acid -relationship: is_conjugate_acid_of CHEBI:133294 ! oxo dicarboxylic acid dianion +relationship: RO:0018034 CHEBI:133294 ! is protonated form of oxo dicarboxylic acid dianion [Term] id: CHEBI:36235 name: bile acid anion -subset: 3_STAR -synonym: "bile acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "bile acid anions" RELATED [chebi] is_a: CHEBI:35757 ! monocarboxylic acid anion is_a: CHEBI:50160 ! steroid acid anion @@ -9196,44 +9617,46 @@ is_a: CHEBI:50160 ! steroid acid anion id: CHEBI:36237 name: cholanic acid def: "A steroid acid that consists of cholane having a carboxy group in place of the methyl group at position 24." [] -subset: 3_STAR -synonym: "cholan-24-oic acid" EXACT IUPAC_NAME [IUPAC] -xref: CAS:25312-65-6 {source="ChemIDplus"} -xref: Patent:JP2008069152 -xref: Reaxys:13246008 {source="Reaxys"} +subset: 3:STAR +synonym: "cholan-24-oic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "cholan-24-oic acid" RELATED IUPAC:NAME [iupac] +xref: cas:25312-65-6 {source="cas"} +xref: patent:JP2008069152 {source="patent"} +xref: reaxys:13246008 {source="reaxys"} is_a: CHEBI:36278 ! cholanic acids [Term] id: CHEBI:36238 name: 5beta-cholanic acid -subset: 3_STAR -synonym: "(5beta)-cholan-24-oic acid" RELATED [ChemIDplus] -synonym: "(5beta,17beta)-gamma-methylandrostane-17-butanoic acid" RELATED [ChemIDplus] -synonym: "5beta-cholan-24-oic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "5beta-cholanic acid" EXACT [ChemIDplus] -synonym: "5beta-cholanoic acid" RELATED [ChemIDplus] -synonym: "ursocholanic acid" RELATED [ChemIDplus] -xref: Beilstein:3214794 {source="Beilstein"} -xref: CAS:546-18-9 {source="ChemIDplus"} -xref: LIPID_MAPS_instance:LMST04010441 {source="LIPID MAPS"} +subset: 3:STAR +synonym: "(5beta)-cholan-24-oic acid" RELATED [chemidplus] +synonym: "(5beta,17beta)-gamma-methylandrostane-17-butanoic acid" RELATED [chemidplus] +synonym: "5beta-cholan-24-oic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "5beta-cholan-24-oic acid" RELATED IUPAC:NAME [iupac] +synonym: "5beta-cholanic acid" RELATED [chemidplus] +synonym: "5beta-cholanoic acid" RELATED [chemidplus] +synonym: "ursocholanic acid" RELATED [chemidplus] +xref: beilstein:3214794 {source="beilstein"} +xref: cas:546-18-9 {source="cas"} +xref: lipidmaps:LMST04010441 {source="lipidmaps"} is_a: CHEBI:36237 ! cholanic acid is_a: CHEBI:36248 ! 5beta-cholanic acids [Term] id: CHEBI:36248 name: 5beta-cholanic acids -def: "Members of the class of cholanic acids based on a 5beta-cholane skeleton." [] -subset: 3_STAR +def: "Members of the class of cholanic acids based on a 5β-cholane skeleton." [] +subset: 3:STAR is_a: CHEBI:136889 ! 5beta steroid is_a: CHEBI:36278 ! cholanic acids -relationship: has_parent_hydride CHEBI:20664 ! 5beta-cholane +relationship: RO:0018040 CHEBI:20664 ! has parent hydride 5beta-cholane [Term] id: CHEBI:36277 name: bile acid salt def: "A salt of a bile acid." [] -subset: 3_STAR -synonym: "bile acid salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "bile acid salts" RELATED [chebi] is_a: CHEBI:24868 ! organic salt is_a: CHEBI:36078 ! cholanoid @@ -9242,35 +9665,37 @@ id: CHEBI:36278 name: cholanic acids alt_id: CHEBI:23166 alt_id: CHEBI:23211 -subset: 1_STAR +subset: 1:STAR +synonym: "cholan-24-oic acids" RELATED [chebi] is_a: CHEBI:36078 ! cholanoid is_a: CHEBI:47891 ! steroid acid [Term] id: CHEBI:36309 name: cyclic tetrapyrrole -subset: 3_STAR -synonym: "cyclic tetrapyrroles" RELATED [ChEBI] -synonym: "macrocyclic tetrapyrrole" RELATED [ChEBI] -synonym: "macrocyclic tetrapyrroles" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "cyclic tetrapyrroles" RELATED [chebi] +synonym: "macrocyclic tetrapyrrole" RELATED [chebi] +synonym: "macrocyclic tetrapyrroles" EXACT IUPAC:NAME [IUPAC] +synonym: "macrocyclic tetrapyrroles" RELATED IUPAC:NAME [iupac] is_a: CHEBI:26932 ! tetrapyrrole is_a: CHEBI:47882 ! cyclic polypyrrole [Term] id: CHEBI:36338 name: lepton -def: "Lepton is a fermion that does not experience the strong force (strong interaction). The term is derived from the Greek lambdaepsilonpitauomicronsigma (small, thin)." [] -subset: 3_STAR -synonym: "leptons" RELATED [ChEBI] +def: "Lepton is a fermion that does not experience the strong force (strong interaction). The term is derived from the Greek λεπτοσ (small, thin)." [] +subset: 3:STAR +synonym: "leptons" RELATED [chebi] is_a: CHEBI:33233 ! fundamental particle is_a: CHEBI:36340 ! fermion [Term] id: CHEBI:36339 name: baryon -def: "Baryon is a fermion that does experience the strong force (strong interaction). The term is derived from the Greek betaalpharhoupsilonsigma (heavy)." [] -subset: 3_STAR -synonym: "baryons" RELATED [ChEBI] +def: "Baryon is a fermion that does experience the strong force (strong interaction). The term is derived from the Greek βαρυσ (heavy)." [] +subset: 3:STAR +synonym: "baryons" RELATED [chebi] is_a: CHEBI:36340 ! fermion is_a: CHEBI:36344 ! hadron @@ -9278,58 +9703,63 @@ is_a: CHEBI:36344 ! hadron id: CHEBI:36340 name: fermion def: "Particle of half-integer spin quantum number following Fermi-Dirac statistics. Fermions are named after Enrico Fermi." [] -subset: 3_STAR -synonym: "fermion" EXACT IUPAC_NAME [IUPAC] -synonym: "fermions" RELATED [ChEBI] +subset: 3:STAR +synonym: "fermion" EXACT IUPAC:NAME [IUPAC] +synonym: "fermion" RELATED IUPAC:NAME [iupac] +synonym: "fermions" RELATED [chebi] is_a: CHEBI:36342 ! subatomic particle [Term] id: CHEBI:36341 name: boson def: "Particle of integer spin quantum number following Bose-Einstein statistics. Bosons are named after Satyendra Nath Bose." [] -subset: 3_STAR -synonym: "boson" EXACT IUPAC_NAME [IUPAC] -synonym: "bosons" RELATED [ChEBI] +subset: 3:STAR +synonym: "boson" EXACT IUPAC:NAME [IUPAC] +synonym: "boson" RELATED IUPAC:NAME [iupac] +synonym: "bosons" RELATED [chebi] is_a: CHEBI:36342 ! subatomic particle [Term] id: CHEBI:36342 name: subatomic particle def: "A particle smaller than an atom." [] -subset: 3_STAR -synonym: "subatomic particles" RELATED [ChEBI] -xref: Wikipedia:Subatomic_particle +subset: 3:STAR +synonym: "subatomic particles" RELATED [chebi] +xref: wikipedia.en:Subatomic_particle {source="wikipedia.en"} +is_a: BFO:0000040 ! material entity +disjoint_from: COB:0000011 ! atom [Term] id: CHEBI:36343 name: composite particle def: "A subatomic particle known to have substructure (i.e. consisting of smaller particles)." [] -subset: 3_STAR -synonym: "composite particles" RELATED [ChEBI] +subset: 3:STAR +synonym: "composite particles" RELATED [chebi] is_a: CHEBI:36342 ! subatomic particle [Term] id: CHEBI:36344 name: hadron def: "Hadron is a subatomic particle which experiences the strong force." [] -subset: 3_STAR -synonym: "hadrons" RELATED [ChEBI] +subset: 3:STAR +synonym: "hadrons" RELATED [chebi] is_a: CHEBI:36343 ! composite particle [Term] id: CHEBI:36347 name: nuclear particle def: "A nucleus or any of its constituents in any of their energy states." [] -subset: 3_STAR -synonym: "nuclear particle" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "nuclear particle" EXACT IUPAC:NAME [IUPAC] +synonym: "nuclear particle" RELATED IUPAC:NAME [iupac] is_a: CHEBI:36342 ! subatomic particle [Term] id: CHEBI:36357 name: polyatomic entity def: "Any molecular entity consisting of more than one atom." [] -subset: 3_STAR -synonym: "polyatomic entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "polyatomic entities" RELATED [chebi] is_a: CHEBI:23367 ! molecular entity relationship: has_part CHEBI:24433 ! group @@ -9337,31 +9767,32 @@ relationship: has_part CHEBI:24433 ! group id: CHEBI:36358 name: polyatomic ion def: "An ion consisting of more than one atom." [] -subset: 3_STAR -synonym: "polyatomic ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "polyatomic ions" RELATED [chebi] is_a: CHEBI:24870 ! ion is_a: CHEBI:36357 ! polyatomic entity [Term] id: CHEBI:36359 name: phosphorus oxoacid derivative -subset: 3_STAR -synonym: "phosphorus oxoacid derivative" EXACT [ChEBI] +subset: 3:STAR +synonym: "phosphorus oxoacid derivative" RELATED [chebi] is_a: CHEBI:33241 ! oxoacid derivative is_a: CHEBI:36360 ! phosphorus oxoacids and derivatives -relationship: has_functional_parent CHEBI:33457 ! phosphorus oxoacid +relationship: RO:0018038 CHEBI:33457 ! has functional parent phosphorus oxoacid [Term] id: CHEBI:36360 name: phosphorus oxoacids and derivatives -subset: 1_STAR +subset: 1:STAR +synonym: "phosphorus oxoacids and derivatives" RELATED [chebi] is_a: CHEBI:26082 ! phosphorus molecular entity [Term] id: CHEBI:36364 name: alkaline earth salt -subset: 3_STAR -synonym: "alkaline earth salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkaline earth salts" RELATED [chebi] is_a: CHEBI:24866 ! salt is_a: CHEBI:33299 ! alkaline earth molecular entity @@ -9370,27 +9801,27 @@ id: CHEBI:36498 name: galactosylceramide alt_id: CHEBI:13641 def: "Any of the cerebrosides in which the monosaccharide head group is galactose." [] -subset: 3_STAR -synonym: "a D-galactosylceramide" RELATED [UniProt] -synonym: "Cerebroside" RELATED [KEGG_COMPOUND] -synonym: "D-Galactosyl-N-acylsphingosine" RELATED [KEGG_COMPOUND] -synonym: "D-Galactosylceramide" RELATED [KEGG_COMPOUND] -synonym: "Galactocerebroside" RELATED [KEGG_COMPOUND] -synonym: "galactocerebroside" RELATED [ChEBI] -synonym: "galactocerebrosides" RELATED [ChEBI] -synonym: "galactosylceramides" RELATED [ChEBI] -xref: KEGG:C02686 -xref: KEGG:G11121 -xref: PMID:16758576 {source="Europe PMC"} -xref: PMID:17855742 {source="Europe PMC"} -xref: PMID:2088646 {source="Europe PMC"} -xref: PMID:23065187 {source="Europe PMC"} -xref: PMID:23446636 {source="Europe PMC"} -xref: PMID:23650721 {source="Europe PMC"} -xref: PMID:25947378 {source="Europe PMC"} -xref: PMID:26058499 {source="Europe PMC"} -xref: PMID:26907993 {source="Europe PMC"} -xref: PMID:27786470 {source="Europe PMC"} +subset: 3:STAR +synonym: "a D-galactosylceramide" RELATED [uniprot_ft] +synonym: "Cerebroside" RELATED [kegg.compound] +synonym: "D-Galactosyl-N-acylsphingosine" RELATED [kegg.compound] +synonym: "D-Galactosylceramide" RELATED [kegg.compound] +synonym: "Galactocerebroside" RELATED [kegg.compound] +synonym: "galactocerebroside" RELATED [chebi] +synonym: "galactocerebrosides" RELATED [chebi] +synonym: "galactosylceramides" RELATED [chebi] +xref: kegg.compound:C02686 {source="kegg.compound"} +xref: kegg.glycan:G11121 {source="kegg.glycan"} +xref: pubmed:16758576 {source="pubmed"} +xref: pubmed:17855742 {source="pubmed"} +xref: pubmed:2088646 {source="pubmed"} +xref: pubmed:23065187 {source="pubmed"} +xref: pubmed:23446636 {source="pubmed"} +xref: pubmed:23650721 {source="pubmed"} +xref: pubmed:25947378 {source="pubmed"} +xref: pubmed:26058499 {source="pubmed"} +xref: pubmed:26907993 {source="pubmed"} +xref: pubmed:27786470 {source="pubmed"} is_a: CHEBI:23079 ! cerebroside is_a: CHEBI:5254 ! galactolipid is_a: CHEBI:62941 ! glycosylceramide @@ -9399,8 +9830,9 @@ is_a: CHEBI:62941 ! glycosylceramide id: CHEBI:36586 name: carbonyl compound def: "Any compound containing the carbonyl group, C=O. The term is commonly used in the restricted sense of aldehydes and ketones, although it actually includes carboxylic acids and derivatives." [] -subset: 3_STAR -synonym: "carbonyl compounds" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "carbonyl compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "carbonyl compounds" RELATED IUPAC:NAME [iupac] is_a: CHEBI:36587 ! organic oxo compound is_a: CHEBI:36963 ! organooxygen compound relationship: has_part CHEBI:23019 ! carbonyl group @@ -9409,9 +9841,10 @@ relationship: has_part CHEBI:23019 ! carbonyl group id: CHEBI:36587 name: organic oxo compound def: "Organic compounds containing an oxygen atom, =O, doubly bonded to carbon or another element." [] -subset: 3_STAR -synonym: "organic oxo compounds" RELATED [ChEBI] -synonym: "oxo compounds" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "organic oxo compounds" RELATED [chebi] +synonym: "oxo compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "oxo compounds" RELATED IUPAC:NAME [iupac] is_a: CHEBI:72695 ! organic molecule relationship: has_part CHEBI:46629 ! oxo group @@ -9419,9 +9852,9 @@ relationship: has_part CHEBI:46629 ! oxo group id: CHEBI:36699 name: corticosteroid hormone def: "Any of a class of steroid hormones that are produced in the adrenal cortex." [] -subset: 3_STAR -synonym: "adrenal cortex hormones" RELATED [ChEBI] -synonym: "corticosteroid hormones" RELATED [ChEBI] +subset: 3:STAR +synonym: "adrenal cortex hormones" RELATED [chebi] +synonym: "corticosteroid hormones" RELATED [chebi] is_a: CHEBI:26764 ! steroid hormone is_a: CHEBI:50858 ! corticosteroid @@ -9429,10 +9862,10 @@ is_a: CHEBI:50858 ! corticosteroid id: CHEBI:36700 name: phosphocholines def: "Any compound having phosphocholine as part of its structure." [] -subset: 3_STAR -synonym: "choline phosphates" RELATED [ChEBI] -synonym: "O-phosphocholines" RELATED [ChEBI] -synonym: "phosphorylcholines" RELATED [ChEBI] +subset: 3:STAR +synonym: "choline phosphates" RELATED [chebi] +synonym: "O-phosphocholines" RELATED [chebi] +synonym: "phosphorylcholines" RELATED [chebi] is_a: CHEBI:23213 ! choline ester is_a: CHEBI:23217 ! cholines is_a: CHEBI:25703 ! organic phosphate @@ -9442,23 +9875,24 @@ is_a: CHEBI:37734 ! phosphoric ester id: CHEBI:36735 name: biladienes def: "Compounds based on a biladiene skeleton." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:25046 ! linear tetrapyrrole [Term] id: CHEBI:36756 name: farnesane def: "A sesquiterpene that is dodecane substituted by methyl groups at positions 2, 6 and 10." [] -subset: 3_STAR -synonym: "2,6,10-trimethyldodecane" EXACT IUPAC_NAME [IUPAC] -synonym: "Farnesan" RELATED [NIST_Chemistry_WebBook] -synonym: "farnesane" EXACT [NIST_Chemistry_WebBook] -xref: CAS:3891-98-3 {source="ChemIDplus", source="NIST Chemistry WebBook"} -xref: LIPID_MAPS_instance:LMPR0103010000 {source="LIPID MAPS"} -xref: MetaCyc:CPD-8764 -xref: Patent:US2008098645 -xref: Patent:US7399323 -xref: Reaxys:1719672 {source="Reaxys"} +subset: 3:STAR +synonym: "2,6,10-trimethyldodecane" EXACT IUPAC:NAME [IUPAC] +synonym: "2,6,10-trimethyldodecane" RELATED IUPAC:NAME [iupac] +synonym: "Farnesan" RELATED [nist] +synonym: "farnesane" RELATED [nist] +xref: cas:3891-98-3 {source="cas"} +xref: lipidmaps:LMPR0103010000 {source="lipidmaps"} +xref: metacyc.compound:CPD-8764 {source="metacyc.compound"} +xref: patent:US2008098645 {source="patent"} +xref: patent:US7399323 {source="patent"} +xref: reaxys:1719672 {source="reaxys"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:18310 ! alkane is_a: CHEBI:35189 ! sesquiterpene @@ -9467,64 +9901,64 @@ relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite [Term] id: CHEBI:36757 name: farnesane sesquiterpenoid -subset: 3_STAR -synonym: "farnesane sesquiterpenoid" EXACT [ChEBI] -synonym: "farnesane sesquiterpenoids" RELATED [ChEBI] +subset: 3:STAR +synonym: "farnesane sesquiterpenoid" RELATED [chebi] +synonym: "farnesane sesquiterpenoids" RELATED [chebi] is_a: CHEBI:26658 ! sesquiterpenoid -relationship: has_parent_hydride CHEBI:36756 ! farnesane +relationship: RO:0018040 CHEBI:36756 ! has parent hydride farnesane [Term] id: CHEBI:36838 name: 17-hydroxy steroid def: "A hydroxy steroid carrying a hydroxy group at position 17." [] -subset: 3_STAR -synonym: "17-hydroxy steroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "17-hydroxy steroids" RELATED [chebi] is_a: CHEBI:35350 ! hydroxy steroid [Term] id: CHEBI:36841 name: 11-hydroxy steroid -subset: 3_STAR -synonym: "11-hydroxy steroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "11-hydroxy steroids" RELATED [chebi] is_a: CHEBI:35350 ! hydroxy steroid [Term] id: CHEBI:36885 name: 20-oxo steroid def: "An oxo steroid carrying an oxo group at position 20." [] -subset: 3_STAR -synonym: "20-oxo steroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "20-oxo steroids" RELATED [chebi] is_a: CHEBI:35789 ! oxo steroid [Term] id: CHEBI:36887 name: 18-oxo steroid -subset: 3_STAR -synonym: "18-oxo steroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "18-oxo steroids" RELATED [chebi] is_a: CHEBI:35789 ! oxo steroid [Term] id: CHEBI:36902 name: chalcogen hydride -subset: 3_STAR -synonym: "chalcogen hydride" EXACT [ChEBI] -synonym: "chalcogen hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "chalcogen hydride" RELATED [chebi] +synonym: "chalcogen hydrides" RELATED [chebi] is_a: CHEBI:33242 ! inorganic hydride is_a: CHEBI:33304 ! chalcogen molecular entity [Term] id: CHEBI:36914 name: inorganic ion -subset: 3_STAR -synonym: "inorganic ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic ions" RELATED [chebi] is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:24870 ! ion [Term] id: CHEBI:36915 name: inorganic cation -subset: 3_STAR -synonym: "inorganic cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic cations" RELATED [chebi] is_a: CHEBI:36914 ! inorganic ion is_a: CHEBI:36916 ! cation @@ -9534,32 +9968,34 @@ name: cation alt_id: CHEBI:23058 alt_id: CHEBI:3473 def: "A monoatomic or polyatomic species having one or more elementary charges of the proton." [] -subset: 3_STAR +subset: 3:STAR synonym: "Cation" EXACT [KEGG_COMPOUND] -synonym: "cation" EXACT IUPAC_NAME [ChEBI, IUPAC] -synonym: "cationes" RELATED [ChEBI] -synonym: "cations" RELATED [ChEBI] -synonym: "Kation" RELATED [ChEBI] -synonym: "Kationen" RELATED [ChEBI] -xref: KEGG:C01373 +synonym: "Cation" RELATED [kegg.compound] +synonym: "cation" EXACT IUPAC:NAME [IUPAC] +synonym: "cation" RELATED IUPAC:NAME [chebi, iupac] +synonym: "cationes" RELATED [chebi] +synonym: "cations" RELATED [chebi] +synonym: "Kation" RELATED [chebi] +synonym: "Kationen" RELATED [chebi] +xref: kegg.compound:C01373 {source="kegg.compound"} is_a: CHEBI:24870 ! ion [Term] id: CHEBI:36961 name: chalcocarbonic acid -subset: 3_STAR -synonym: "chalcocarbonic acid" EXACT [ChEBI] -synonym: "chalcocarbonic acids" EXACT IUPAC_NAME [IUPAC] -synonym: "chalcocarbonic acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "chalcocarbonic acid" RELATED [chebi] +synonym: "chalcocarbonic acids" EXACT IUPAC:NAME [IUPAC] +synonym: "chalcocarbonic acids" RELATED IUPAC:NAME [chebi, iupac] is_a: CHEBI:36962 ! organochalcogen compound [Term] id: CHEBI:36962 name: organochalcogen compound def: "An organochalcogen compound is a compound containing at least one carbon-chalcogen bond." [] -subset: 3_STAR -synonym: "organochalcogen compound" EXACT [ChEBI] -synonym: "organochalcogen compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organochalcogen compound" RELATED [chebi] +synonym: "organochalcogen compounds" RELATED [chebi] is_a: CHEBI:33285 ! heteroorganic entity is_a: CHEBI:33304 ! chalcogen molecular entity @@ -9567,10 +10003,10 @@ is_a: CHEBI:33304 ! chalcogen molecular entity id: CHEBI:36963 name: organooxygen compound def: "An organochalcogen compound containing at least one carbon-oxygen bond." [] -subset: 3_STAR -synonym: "organooxygen compound" EXACT [ChEBI] -synonym: "organooxygen compounds" RELATED [ChEBI] -xref: PMID:17586126 {source="Europe PMC"} +subset: 3:STAR +synonym: "organooxygen compound" RELATED [chebi] +synonym: "organooxygen compounds" RELATED [chebi] +xref: pubmed:17586126 {source="pubmed"} is_a: CHEBI:25806 ! oxygen molecular entity is_a: CHEBI:36962 ! organochalcogen compound @@ -9581,37 +10017,37 @@ alt_id: CHEBI:13215 alt_id: CHEBI:13663 alt_id: CHEBI:7656 def: "A nucleotide is a nucleoside phosphate resulting from the condensation of the 3 or 5 hydroxy group of a nucleoside with phosphoric acid." [] -subset: 3_STAR -synonym: "Nucleotide" EXACT [KEGG_COMPOUND] -synonym: "nucleotides" RELATED [ChEBI] -xref: KEGG:C00215 -xref: Wikipedia:Nucleotide +subset: 3:STAR +synonym: "Nucleotide" RELATED [kegg.compound] +synonym: "nucleotides" RELATED [chebi] +xref: kegg.compound:C00215 {source="kegg.compound"} +xref: wikipedia.en:Nucleotide {source="wikipedia.en"} is_a: CHEBI:25608 ! nucleoside phosphate [Term] id: CHEBI:37015 name: ribonucleoside 5'-phosphate -subset: 3_STAR -synonym: "ribonucleoside 5'-phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "ribonucleoside 5'-phosphates" RELATED [chebi] is_a: CHEBI:16701 ! nucleoside 5'-phosphate is_a: CHEBI:26561 ! ribonucleotide [Term] id: CHEBI:37022 name: amino-acid anion -subset: 3_STAR -synonym: "amino acid anion" RELATED [ChEBI] -synonym: "amino acid anions" RELATED [ChEBI] -synonym: "amino-acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino acid anion" RELATED [chebi] +synonym: "amino acid anions" RELATED [chebi] +synonym: "amino-acid anions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion is_a: CHEBI:35352 ! organonitrogen compound -relationship: is_conjugate_base_of CHEBI:33709 ! amino acid +relationship: RO:0018033 CHEBI:33709 ! is deprotonated form of amino acid [Term] id: CHEBI:37038 name: purine ribonucleoside 5'-diphosphate -subset: 3_STAR -synonym: "purine ribonucleoside 5'-diphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine ribonucleoside 5'-diphosphates" RELATED [chebi] is_a: CHEBI:26396 ! purine ribonucleoside diphosphate is_a: CHEBI:26400 ! purine ribonucleotide is_a: CHEBI:37075 ! ribonucleoside 5'-diphosphate @@ -9619,8 +10055,8 @@ is_a: CHEBI:37075 ! ribonucleoside 5'-diphosphate [Term] id: CHEBI:37045 name: purine ribonucleoside 5'-triphosphate -subset: 3_STAR -synonym: "purine ribonucleoside 5'-triphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "purine ribonucleoside 5'-triphosphates" RELATED [chebi] is_a: CHEBI:26398 ! purine ribonucleoside triphosphate is_a: CHEBI:26400 ! purine ribonucleotide is_a: CHEBI:37076 ! ribonucleoside 5'-triphosphate @@ -9628,22 +10064,22 @@ is_a: CHEBI:37076 ! ribonucleoside 5'-triphosphate [Term] id: CHEBI:37075 name: ribonucleoside 5'-diphosphate -subset: 3_STAR -synonym: "ribonucleoside 5'-diphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "ribonucleoside 5'-diphosphates" RELATED [chebi] is_a: CHEBI:37015 ! ribonucleoside 5'-phosphate [Term] id: CHEBI:37076 name: ribonucleoside 5'-triphosphate -subset: 3_STAR -synonym: "ribonucleoside 5'-triphosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "ribonucleoside 5'-triphosphates" RELATED [chebi] is_a: CHEBI:37015 ! ribonucleoside 5'-phosphate [Term] id: CHEBI:37096 name: adenosine 5'-phosphate -subset: 3_STAR -synonym: "adenosine 5'-phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "adenosine 5'-phosphates" RELATED [chebi] is_a: CHEBI:22256 ! adenosine phosphate [Term] @@ -9652,50 +10088,54 @@ name: glucan alt_id: CHEBI:24255 alt_id: CHEBI:5392 def: "A polysaccharide composed of glucose residues." [] -subset: 3_STAR +subset: 3:STAR synonym: "Glucan" EXACT [KEGG_COMPOUND] -synonym: "glucan" EXACT IUPAC_NAME [IUPAC] -synonym: "glucans" RELATED [ChEBI] -xref: CAS:9037-91-6 {source="ChemIDplus"} -xref: KEGG:C01379 +synonym: "Glucan" RELATED [kegg.compound] +synonym: "glucan" EXACT IUPAC:NAME [IUPAC] +synonym: "glucan" RELATED IUPAC:NAME [iupac] +synonym: "glucans" RELATED [chebi] +xref: cas:9037-91-6 {source="cas"} +xref: kegg.compound:C01379 {source="kegg.compound"} is_a: CHEBI:37164 ! homopolysaccharide [Term] id: CHEBI:37164 name: homopolysaccharide def: "Glycans composed of a single type of monosaccharide residue. They are named by replacing the ending '-ose' of the sugar by '-an'." [] -subset: 3_STAR -synonym: "homoglycan" RELATED [IUPAC] -synonym: "homopolysaccharide" EXACT IUPAC_NAME [IUPAC] -synonym: "homopolysaccharides" RELATED [ChEBI] +subset: 3:STAR +synonym: "homoglycan" RELATED [iupac] +synonym: "homopolysaccharide" EXACT IUPAC:NAME [IUPAC] +synonym: "homopolysaccharide" RELATED IUPAC:NAME [iupac] +synonym: "homopolysaccharides" RELATED [chebi] is_a: CHEBI:18154 ! polysaccharide [Term] id: CHEBI:37175 name: organic hydride -subset: 3_STAR -synonym: "organic hydrides" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic hydrides" RELATED [chebi] is_a: CHEBI:33692 ! hydrides [Term] id: CHEBI:37176 name: mononuclear parent hydride -subset: 3_STAR -synonym: "mononuclear hydride" RELATED [ChEBI] -synonym: "mononuclear hydrides" RELATED [IUPAC] -synonym: "mononuclear parent hydrides" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "mononuclear hydride" RELATED [chebi] +synonym: "mononuclear hydrides" RELATED [iupac] +synonym: "mononuclear parent hydrides" EXACT IUPAC:NAME [IUPAC] +synonym: "mononuclear parent hydrides" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33692 ! hydrides [Term] id: CHEBI:37246 name: elemental sodium -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:26712 ! sodium molecular entity [Term] id: CHEBI:37247 name: elemental potassium -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:26217 ! potassium molecular entity [Term] @@ -9704,14 +10144,15 @@ name: mucopolysaccharide alt_id: CHEBI:25425 alt_id: CHEBI:7011 def: "Any of the group of polysaccharides composed of alternating units from uronic acids and glycosamines, and commonly partially esterified with sulfuric acid." [] -subset: 3_STAR -synonym: "mucopolisacarido" RELATED [ChEBI] -synonym: "mucopolisacaridos" RELATED [IUPAC] -synonym: "Mucopolysaccharid" RELATED [ChEBI] -synonym: "Mucopolysaccharide" EXACT [KEGG_COMPOUND] -synonym: "mucopolysaccharides" EXACT IUPAC_NAME [IUPAC] -synonym: "Mukopolysaccharid" RELATED [ChEBI] -xref: KEGG:C05114 +subset: 3:STAR +synonym: "mucopolisacarido" RELATED [chebi] +synonym: "mucopolisacaridos" RELATED [iupac] +synonym: "Mucopolysaccharid" RELATED [chebi] +synonym: "Mucopolysaccharide" RELATED [kegg.compound] +synonym: "mucopolysaccharides" EXACT IUPAC:NAME [IUPAC] +synonym: "mucopolysaccharides" RELATED IUPAC:NAME [iupac] +synonym: "Mukopolysaccharid" RELATED [chebi] +xref: kegg.compound:C05114 {source="kegg.compound"} is_a: CHEBI:18085 ! glycosaminoglycan [Term] @@ -9719,21 +10160,21 @@ id: CHEBI:37397 name: chondroitin sulfate alt_id: CHEBI:23224 alt_id: CHEBI:3676 -def: "Any of a class of 10--60 kDa glycosaminoglycan sulfates, widely distributed in cartilage and other mammalian connective tissues." [] -subset: 3_STAR -synonym: "chondroitin polysulfate" RELATED [ChemIDplus] -synonym: "Chondroitin sulfate" EXACT [KEGG_COMPOUND] -synonym: "chondroitin sulfates" RELATED [ChemIDplus] -synonym: "chondroitin sulfuric acid" RELATED [ChemIDplus] -synonym: "chondroitin sulphate" RELATED [ChemIDplus] -synonym: "Chondroitinsulfat" RELATED [ChEBI] -xref: CAS:9007-28-7 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: KEGG:C00607 -xref: PMID:11514091 {source="Europe PMC"} -xref: PMID:7538297 {source="Europe PMC"} +def: "Any of a class of 10—60 kDa glycosaminoglycan sulfates, widely distributed in cartilage and other mammalian connective tissues." [] +subset: 3:STAR +synonym: "chondroitin polysulfate" RELATED [chemidplus] +synonym: "Chondroitin sulfate" RELATED [kegg.compound] +synonym: "chondroitin sulfates" RELATED [chemidplus] +synonym: "chondroitin sulfuric acid" RELATED [chemidplus] +synonym: "chondroitin sulphate" RELATED [chemidplus] +synonym: "Chondroitinsulfat" RELATED [chebi] +xref: cas:9007-28-7 {source="cas"} +xref: kegg.compound:C00607 {source="kegg.compound"} +xref: pubmed:11514091 {source="pubmed"} +xref: pubmed:7538297 {source="pubmed"} is_a: CHEBI:35722 ! sulfated glycosaminoglycan is_a: CHEBI:37395 ! mucopolysaccharide -relationship: has_functional_parent CHEBI:16137 ! chondroitin D-glucuronate +relationship: RO:0018038 CHEBI:16137 ! has functional parent chondroitin D-glucuronate [Term] id: CHEBI:37527 @@ -9742,25 +10183,27 @@ alt_id: CHEBI:13800 alt_id: CHEBI:13801 alt_id: CHEBI:22209 alt_id: CHEBI:2426 -def: "An acid is a molecular entity capable of donating a hydron (Bronsted acid) or capable of forming a covalent bond with an electron pair (Lewis acid)." [] -subset: 3_STAR +def: "An acid is a molecular entity capable of donating a hydron (Brønsted acid) or capable of forming a covalent bond with an electron pair (Lewis acid)." [] +subset: 3:STAR synonym: "Acid" EXACT [KEGG_COMPOUND] -synonym: "acid" EXACT IUPAC_NAME [IUPAC] -synonym: "acide" RELATED [IUPAC] -synonym: "acido" RELATED [ChEBI] -synonym: "acids" RELATED [ChEBI] -synonym: "Saeure" RELATED [ChEBI] -synonym: "Saeuren" RELATED [ChEBI] -xref: KEGG:C00174 +synonym: "Acid" RELATED [kegg.compound] +synonym: "acid" EXACT IUPAC:NAME [IUPAC] +synonym: "acid" RELATED IUPAC:NAME [iupac] +synonym: "acide" RELATED [iupac] +synonym: "acido" RELATED [chebi] +synonym: "acids" RELATED [chebi] +synonym: "Saeure" RELATED [chebi] +synonym: "Saeuren" RELATED [chebi] +xref: kegg.compound:C00174 {source="kegg.compound"} is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:37577 name: heteroatomic molecular entity def: "A molecular entity consisting of two or more chemical elements." [] -subset: 3_STAR -synonym: "chemical compound" RELATED [ChEBI] -synonym: "heteroatomic molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "chemical compound" RELATED [chebi] +synonym: "heteroatomic molecular entities" RELATED [chebi] is_a: CHEBI:36357 ! polyatomic entity [Term] @@ -9768,11 +10211,11 @@ id: CHEBI:37622 name: carboxamide alt_id: CHEBI:35354 alt_id: CHEBI:35355 -def: "An amide of a carboxylic acid, having the structure RC(=O)NR2. The term is used as a suffix in systematic name formation to denote the -C(=O)NH2 group including its carbon atom." [] -subset: 3_STAR -synonym: "carboxamides" EXACT IUPAC_NAME [IUPAC] -synonym: "carboxamides" RELATED [ChEBI] -synonym: "primary carboxamide" RELATED [ChEBI] +def: "An amide of a carboxylic acid, having the structure RC(=O)NR2. The term is used as a suffix in systematic name formation to denote the ‒C(=O)NH2 group including its carbon atom." [] +subset: 3:STAR +synonym: "carboxamides" EXACT IUPAC:NAME [IUPAC] +synonym: "carboxamides" RELATED IUPAC:NAME [chebi, iupac] +synonym: "primary carboxamide" RELATED [chebi] is_a: CHEBI:33256 ! primary amide is_a: CHEBI:35352 ! organonitrogen compound is_a: CHEBI:36963 ! organooxygen compound @@ -9781,15 +10224,18 @@ relationship: has_part CHEBI:23004 ! carbamoyl group [Term] id: CHEBI:37661 name: glucopyranose -subset: 3_STAR -synonym: "glucopyranose" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "glucopyranose" EXACT IUPAC:NAME [IUPAC] +synonym: "glucopyranose" RELATED IUPAC:NAME [iupac] is_a: CHEBI:17234 ! glucose [Term] id: CHEBI:37734 name: phosphoric ester alt_id: CHEBI:26019 -subset: 1_STAR +subset: 1:STAR +synonym: "phosphate esters" RELATED [chebi] +synonym: "phosphoric esters" RELATED [chebi] is_a: CHEBI:26079 ! phosphoric acid derivative is_a: CHEBI:35701 ! ester @@ -9802,116 +10248,119 @@ alt_id: CHEBI:45158 alt_id: CHEBI:45187 alt_id: CHEBI:45209 alt_id: CHEBI:8171 -def: "A non-proteinogenic L-alpha-amino acid that is L-tyrosine phosphorylated at the phenolic hydroxy group." [] -subset: 3_STAR -synonym: "O(4)-phosphono-L-tyrosine" EXACT IUPAC_NAME [IUPAC] -synonym: "O-phospho-L-tyrosine" RELATED [ChEBI] -synonym: "O-phosphono-L-tyrosine" RELATED [ChEBI] -synonym: "O-phosphotyrosine" RELATED [ChEBI] -synonym: "Phosphonotyrosine" RELATED [KEGG_COMPOUND] -synonym: "Phosphotyrosine" RELATED [KEGG_COMPOUND] -synonym: "tyrosine phosphate" RELATED [ChEBI] -xref: CAS:21820-51-9 {source="ChemIDplus"} -xref: DrugBank:DB01962 -xref: KEGG:C06501 -xref: PDBeChem:PTR -xref: PMID:11400052 {source="Europe PMC"} -xref: PMID:11782793 {source="Europe PMC"} -xref: PMID:11992381 {source="Europe PMC"} -xref: PMID:1382614 {source="Europe PMC"} -xref: PMID:15022197 {source="Europe PMC"} -xref: PMID:16240095 {source="Europe PMC"} -xref: PMID:16926509 {source="Europe PMC"} -xref: PMID:1718554 {source="Europe PMC"} -xref: PMID:18627164 {source="Europe PMC"} -xref: PMID:2415179 {source="Europe PMC"} -xref: PMID:2477282 {source="Europe PMC"} -xref: PMID:2576051 {source="Europe PMC"} -xref: PMID:30398859 {source="Europe PMC"} -xref: PMID:7678776 {source="Europe PMC"} -xref: PMID:8041296 {source="Europe PMC"} -xref: PMID:8603380 {source="Europe PMC"} -xref: PMID:9784397 {source="Europe PMC"} -xref: Reaxys:3150815 {source="Reaxys"} +def: "A non-proteinogenic L-α-amino acid that is L-tyrosine phosphorylated at the phenolic hydroxy group." [] +subset: 3:STAR +synonym: "O(4)-phosphono-L-tyrosine" EXACT IUPAC:NAME [IUPAC] +synonym: "O(4)-phosphono-L-tyrosine" RELATED IUPAC:NAME [iupac] +synonym: "O-phospho-L-tyrosine" RELATED [chebi] +synonym: "O-phosphono-L-tyrosine" RELATED [chebi] +synonym: "O-phosphotyrosine" RELATED [chebi] +synonym: "Phosphonotyrosine" RELATED [kegg.compound] +synonym: "Phosphotyrosine" RELATED [kegg.compound] +synonym: "tyrosine phosphate" RELATED [chebi] +xref: cas:21820-51-9 {source="cas"} +xref: drugbank:DB01962 {source="drugbank"} +xref: kegg.compound:C06501 {source="kegg.compound"} +xref: pdb-ccd:PTR {source="pdb-ccd"} +xref: pubmed:11400052 {source="pubmed"} +xref: pubmed:11782793 {source="pubmed"} +xref: pubmed:11992381 {source="pubmed"} +xref: pubmed:1382614 {source="pubmed"} +xref: pubmed:15022197 {source="pubmed"} +xref: pubmed:16240095 {source="pubmed"} +xref: pubmed:16926509 {source="pubmed"} +xref: pubmed:1718554 {source="pubmed"} +xref: pubmed:18627164 {source="pubmed"} +xref: pubmed:2415179 {source="pubmed"} +xref: pubmed:2477282 {source="pubmed"} +xref: pubmed:2576051 {source="pubmed"} +xref: pubmed:30398859 {source="pubmed"} +xref: pubmed:7678776 {source="pubmed"} +xref: pubmed:8041296 {source="pubmed"} +xref: pubmed:8603380 {source="pubmed"} +xref: pubmed:9784397 {source="pubmed"} +xref: reaxys:3150815 {source="reaxys"} is_a: CHEBI:27177 ! L-tyrosine derivative is_a: CHEBI:74956 ! O(4)-phosphotyrosine is_a: CHEBI:83822 ! non-proteinogenic L-alpha-amino acid -relationship: is_conjugate_acid_of CHEBI:62338 ! O(4)-phosphonato-L-tyrosine(2-) -relationship: is_enantiomer_of CHEBI:74959 ! O(4)-phospho-D-tyrosine relationship: RO:0000087 CHEBI:60816 ! has role immunogen relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018034 CHEBI:62338 ! is protonated form of O(4)-phosphonato-L-tyrosine(2-) +relationship: RO:0018039 CHEBI:74959 ! is enantiomer of O(4)-phospho-D-tyrosine [Term] id: CHEBI:37826 name: sulfuric acid derivative -subset: 3_STAR -synonym: "sulfuric acid derivative" EXACT [ChEBI] -synonym: "sulfuric acid derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "sulfuric acid derivative" RELATED [chebi] +synonym: "sulfuric acid derivatives" RELATED [chebi] is_a: CHEBI:33424 ! sulfur oxoacid derivative -relationship: has_functional_parent CHEBI:26836 ! sulfuric acid +relationship: RO:0018038 CHEBI:26836 ! has functional parent sulfuric acid [Term] id: CHEBI:37838 name: carboacyl group def: "A carboacyl group is a group formed by loss of at least one OH from the carboxy group of a carboxylic acid." [] -subset: 3_STAR -synonym: "carboacyl groups" EXACT IUPAC_NAME [IUPAC] -synonym: "carboxylic acyl group" EXACT IUPAC_NAME [IUPAC] -synonym: "carboxylic acyl groups" RELATED [IUPAC] +subset: 3:STAR +synonym: "carboacyl groups" EXACT IUPAC:NAME [IUPAC] +synonym: "carboacyl groups" RELATED IUPAC:NAME [iupac] +synonym: "carboxylic acyl group" EXACT IUPAC:NAME [IUPAC] +synonym: "carboxylic acyl group" RELATED IUPAC:NAME [iupac] +synonym: "carboxylic acyl groups" RELATED [iupac] is_a: CHEBI:22221 ! acyl group -relationship: is_substituent_group_from CHEBI:33575 ! carboxylic acid +relationship: RO:0018037 CHEBI:33575 ! is substitutent group from carboxylic acid [Term] id: CHEBI:37886 name: adrenergic agonist def: "An agent that selectively binds to and activates adrenergic receptors." [] -subset: 3_STAR -synonym: "adrenergic agonists" RELATED [ChEBI] -synonym: "adrenergic receptor agonist" RELATED [ChEBI] -synonym: "adrenoceptor agonists" RELATED [IUPHAR] -synonym: "adrenomimetic" RELATED [ChEBI] -synonym: "adrenomimetics" RELATED [ChEBI] +subset: 3:STAR +synonym: "adrenergic agonists" RELATED [chebi] +synonym: "adrenergic receptor agonist" RELATED [chebi] +synonym: "adrenoceptor agonists" RELATED [iuphar] +synonym: "adrenomimetic" RELATED [chebi] +synonym: "adrenomimetics" RELATED [chebi] is_a: CHEBI:37962 ! adrenergic agent [Term] id: CHEBI:37962 name: adrenergic agent def: "Any agent that acts on an adrenergic receptor or affects the life cycle of an adrenergic transmitter." [] -subset: 3_STAR -synonym: "adrenergic agents" RELATED [ChEBI] -synonym: "adrenergic drug" RELATED [ChEBI] -synonym: "adrenergic drugs" RELATED [ChEBI] -synonym: "adrenergic neuron agents" RELATED [ChEBI] -synonym: "adrenergics" RELATED [ChEBI] +subset: 3:STAR +synonym: "adrenergic agents" RELATED [chebi] +synonym: "adrenergic drug" RELATED [chebi] +synonym: "adrenergic drugs" RELATED [chebi] +synonym: "adrenergic neuron agents" RELATED [chebi] +synonym: "adrenergics" RELATED [chebi] is_a: CHEBI:35942 ! neurotransmitter agent [Term] id: CHEBI:38070 name: anti-arrhythmia drug def: "A drug used for the treatment or prevention of cardiac arrhythmias. Anti-arrhythmia drugs may affect the polarisation-repolarisation phase of the action potential, its excitability or refractoriness, or impulse conduction or membrane responsiveness within cardiac fibres." [] -subset: 3_STAR -synonym: "anti-arrhythmia agent" RELATED [ChEBI] -synonym: "antiarrhythmic agent" RELATED [ChEBI] +subset: 3:STAR +synonym: "anti-arrhythmia agent" RELATED [chebi] +synonym: "antiarrhythmic agent" RELATED [chebi] is_a: CHEBI:35554 ! cardiovascular drug [Term] id: CHEBI:38077 name: polypyrrole def: "A compound composed of two or more pyrrole units." [] -subset: 3_STAR -synonym: "poly(pyrrole)s" RELATED [ChEBI] -synonym: "polypyrroles" RELATED [ChEBI] -synonym: "PPys" RELATED [ChEBI] -xref: Beilstein:8538310 {source="Beilstein"} +subset: 3:STAR +synonym: "poly(pyrrole)s" RELATED [chebi] +synonym: "polypyrroles" RELATED [chebi] +synonym: "PPys" RELATED [chebi] +xref: beilstein:8538310 {source="beilstein"} is_a: CHEBI:38101 ! organonitrogen heterocyclic compound [Term] id: CHEBI:38101 name: organonitrogen heterocyclic compound def: "Any organonitrogen compound containing a cyclic component with nitrogen and at least one other element as ring member atoms." [] -subset: 3_STAR -synonym: "heterocyclic organonitrogen compounds" RELATED [ChEBI] -synonym: "organonitrogen heterocyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "heterocyclic organonitrogen compounds" RELATED [chebi] +synonym: "organonitrogen heterocyclic compounds" RELATED [chebi] is_a: CHEBI:24532 ! organic heterocyclic compound is_a: CHEBI:35352 ! organonitrogen compound @@ -9919,11 +10368,11 @@ is_a: CHEBI:35352 ! organonitrogen compound id: CHEBI:38104 name: oxacycle def: "Any organic heterocyclic compound containing at least one ring oxygen atom." [] -subset: 3_STAR -synonym: "heterocyclic organooxygen compounds" RELATED [ChEBI] -synonym: "organooxygen heterocyclic compounds" RELATED [ChEBI] -synonym: "oxacycles" RELATED [ChEBI] -xref: PMID:17134300 {source="Europe PMC"} +subset: 3:STAR +synonym: "heterocyclic organooxygen compounds" RELATED [chebi] +synonym: "organooxygen heterocyclic compounds" RELATED [chebi] +synonym: "oxacycles" RELATED [chebi] +xref: pubmed:17134300 {source="pubmed"} is_a: CHEBI:24532 ! organic heterocyclic compound is_a: CHEBI:36963 ! organooxygen compound @@ -9931,8 +10380,8 @@ is_a: CHEBI:36963 ! organooxygen compound id: CHEBI:38147 name: cardiotonic drug def: "A drug that has a strengthening effect on the heart or that can increase cardiac output." [] -subset: 3_STAR -synonym: "cardiotonic drugs" RELATED [ChEBI] +subset: 3:STAR +synonym: "cardiotonic drugs" RELATED [chebi] is_a: CHEBI:35554 ! cardiovascular drug [Term] @@ -9940,64 +10389,64 @@ id: CHEBI:38166 name: organic heteropolycyclic compound alt_id: CHEBI:25429 alt_id: CHEBI:38075 -subset: 3_STAR -synonym: "organic heteropolycyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic heteropolycyclic compounds" RELATED [chebi] is_a: CHEBI:24532 ! organic heterocyclic compound is_a: CHEBI:33671 ! heteropolycyclic compound [Term] id: CHEBI:38179 name: monocyclic heteroarene -subset: 3_STAR -synonym: "monocyclic heteroarenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "monocyclic heteroarenes" RELATED [chebi] is_a: CHEBI:33833 ! heteroarene [Term] id: CHEBI:38180 name: polycyclic heteroarene -subset: 3_STAR -synonym: "polycyclic heteroarenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "polycyclic heteroarenes" RELATED [chebi] is_a: CHEBI:33833 ! heteroarene [Term] id: CHEBI:38323 name: cholinergic drug def: "Any drug used for its actions on cholinergic systems. Included here are agonists and antagonists, drugs that affect the life cycle of acetylcholine, and drugs that affect the survival of cholinergic neurons." [] -subset: 3_STAR -synonym: "cholinergic agent" RELATED [ChEBI] -synonym: "cholinergic drugs" RELATED [ChEBI] -synonym: "cholinomimetic" RELATED [ChEBI] +subset: 3:STAR +synonym: "cholinergic agent" RELATED [chebi] +synonym: "cholinergic drugs" RELATED [chebi] +synonym: "cholinomimetic" RELATED [chebi] is_a: CHEBI:35942 ! neurotransmitter agent [Term] id: CHEBI:38324 name: cholinergic agonist def: "Any drug that binds to and activates cholinergic receptors." [] -subset: 3_STAR -synonym: "acetylcholine agonist" RELATED [ChEBI] -synonym: "acetylcholine agonists" RELATED [ChEBI] -synonym: "acetylcholine receptor agonist" RELATED [IUPHAR] -synonym: "cholinergic agonists" RELATED [ChEBI] -synonym: "cholinomimetic" RELATED [ChEBI] -synonym: "cholinomimetics" RELATED [ChEBI] +subset: 3:STAR +synonym: "acetylcholine agonist" RELATED [chebi] +synonym: "acetylcholine agonists" RELATED [chebi] +synonym: "acetylcholine receptor agonist" RELATED [iuphar] +synonym: "cholinergic agonists" RELATED [chebi] +synonym: "cholinomimetic" RELATED [chebi] +synonym: "cholinomimetics" RELATED [chebi] is_a: CHEBI:38323 ! cholinergic drug [Term] id: CHEBI:38325 name: muscarinic agonist def: "Any drug that binds to and activates a muscarinic cholinergic receptor." [] -subset: 3_STAR -synonym: "muscarinic acetylcholine receptor agonist" RELATED [ChEBI] -synonym: "muscarinic agonists" RELATED [ChEBI] -synonym: "muscarinic cholinergic agonist" RELATED [ChEBI] -synonym: "muscarinic cholinergic agonists" RELATED [ChEBI] +subset: 3:STAR +synonym: "muscarinic acetylcholine receptor agonist" RELATED [chebi] +synonym: "muscarinic agonists" RELATED [chebi] +synonym: "muscarinic cholinergic agonist" RELATED [chebi] +synonym: "muscarinic cholinergic agonists" RELATED [chebi] is_a: CHEBI:38324 ! cholinergic agonist [Term] id: CHEBI:38560 name: simple protein -subset: 3_STAR -synonym: "simple proteins" RELATED [ChEBI] +subset: 3:STAR +synonym: "simple proteins" RELATED [chebi] is_a: CHEBI:36080 ! protein [Term] @@ -10005,16 +10454,16 @@ id: CHEBI:38631 name: aminoalkylindole alt_id: CHEBI:22503 alt_id: CHEBI:24792 -subset: 3_STAR -synonym: "aminoalkylindoles" RELATED [ChEBI] +subset: 3:STAR +synonym: "aminoalkylindoles" RELATED [chebi] is_a: CHEBI:24828 ! indoles [Term] id: CHEBI:38700 name: organic sodium salt -subset: 3_STAR -synonym: "organic sodium salt" EXACT [ChEBI] -synonym: "organic sodium salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic sodium salt" RELATED [chebi] +synonym: "organic sodium salts" RELATED [chebi] is_a: CHEBI:24868 ! organic salt is_a: CHEBI:26714 ! sodium salt @@ -10022,46 +10471,48 @@ is_a: CHEBI:26714 ! sodium salt id: CHEBI:38716 name: carboxylic acid dianion def: "Any dianion containing at least one carboxy group." [] -subset: 3_STAR -synonym: "carboxylic acid dianion" EXACT [ChEBI] -synonym: "carboxylic acid dianions" RELATED [ChEBI] +subset: 3:STAR +synonym: "carboxylic acid dianion" RELATED [chebi] +synonym: "carboxylic acid dianions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion [Term] id: CHEBI:38867 name: anaesthetic def: "Substance which produces loss of feeling or sensation." [] -subset: 3_STAR -synonym: "anaesthetic" EXACT IUPAC_NAME [IUPAC] -synonym: "anaesthetics" RELATED [ChEBI] -synonym: "Anaesthetika" RELATED [ChEBI] -synonym: "Anaesthetikum" RELATED [ChEBI] -synonym: "anesthetic agent" RELATED [ChEBI] -synonym: "anesthetic drug" RELATED [ChEBI] -synonym: "anesthetics" RELATED [ChEBI] +subset: 3:STAR +synonym: "anaesthetic" EXACT IUPAC:NAME [IUPAC] +synonym: "anaesthetic" RELATED IUPAC:NAME [iupac] +synonym: "anaesthetics" RELATED [chebi] +synonym: "Anaesthetika" RELATED [chebi] +synonym: "Anaesthetikum" RELATED [chebi] +synonym: "anesthetic agent" RELATED [chebi] +synonym: "anesthetic drug" RELATED [chebi] +synonym: "anesthetics" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:3892 name: corticotropin -def: "A polypeptide hormone produced and secreted by the pituitary gland comprising 39 amino acid residues coupled in a linear sequence. The N-terminal 24-amino acid segment is identical in all species and contains the adrenocorticotrophic activity. Corticotropin stimulates the cortex of the adrenal gland and boosts the synthesis of corticosteroids, mainly glucocorticoids but also sex steroids (androgens). It is used in the treatment of certain neurological disorders such as infantile spasms and multiple sclerosis, and diagnostically to investigate adrenocortical insufficiency." [] -subset: 3_STAR -synonym: "ACTH" RELATED [KEGG_COMPOUND] -synonym: "Adrenocorticotropic hormone" RELATED [KEGG_COMPOUND] -synonym: "adrenocorticotropin" RELATED [ChemIDplus] -synonym: "corticotrofina" RELATED INN [ChemIDplus] -synonym: "corticotrophine" RELATED INN [ChemIDplus] -synonym: "corticotrophinum" RELATED INN [ChemIDplus] -synonym: "Corticotropin" EXACT [KEGG_COMPOUND] -synonym: "corticotropin" RELATED INN [ChemIDplus] -synonym: "cortrophin" RELATED [ChemIDplus] -synonym: "L-seryl-L-tyrosyl-L-seryl-L-methionyl-L-alpha-glutamyl-L-histidyl-L-phenylalanyl-L-arginyl-L-tryptophylglycyl-L-lysyl-L-prolyl-L-valylglycyl-L-lysyl-L-lysyl-L-arginyl-L-arginyl-L-prolyl-L-valyl-L-lysyl-L-valyl-L-tyrosyl-L-prolyl-L-alpha-aspartylglycyl-L-alanyl-L-alpha-glutamyl-L-alpha-aspartyl-L-alpha-glutamyl-L-seryl-L-alanyl-L-alpha-glutamyl-L-alanyl-L-phenylalanyl-L-prolyl-L-leucyl-L-alpha-glutamyl-L-phenylalanine" EXACT IUPAC_NAME [IUPAC] -synonym: "SYSMEHFRWGKPVGKKRRPVKVYPDGAEDQLAEAFPLEF" RELATED [DrugBank] -xref: CAS:9002-60-2 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:4931 {source="DrugCentral"} -xref: DrugBank:DB01285 -xref: KEGG:C02017 -xref: KEGG:D00146 +def: "A polypeptide hormone produced and secreted by the pituitary gland comprising 39 amino acid residues coupled in a linear sequence. The N-terminal 24-amino acid segment is identical in all species and contains the adrenocorticotrophic activity. Corticotropin stimulates the cortex of the adrenal gland and boosts the synthesis of corticosteroids, mainly glucocorticoids but also sex steroids (androgens). It is used in the treatment of certain neurological disorders such as infantile spasms and multiple sclerosis, and diagnostically to investigate adrenocortical insufficiency." [] +subset: 3:STAR +synonym: "ACTH" RELATED [kegg.compound] +synonym: "Adrenocorticotropic hormone" RELATED [kegg.compound] +synonym: "adrenocorticotropin" RELATED [chemidplus] +synonym: "corticotrofina" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "corticotrophine" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "corticotrophinum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Corticotropin" RELATED [kegg.compound] +synonym: "corticotropin" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "cortrophin" RELATED [chemidplus] +synonym: "L-seryl-L-tyrosyl-L-seryl-L-methionyl-L-alpha-glutamyl-L-histidyl-L-phenylalanyl-L-arginyl-L-tryptophylglycyl-L-lysyl-L-prolyl-L-valylglycyl-L-lysyl-L-lysyl-L-arginyl-L-arginyl-L-prolyl-L-valyl-L-lysyl-L-valyl-L-tyrosyl-L-prolyl-L-alpha-aspartylglycyl-L-alanyl-L-alpha-glutamyl-L-alpha-aspartyl-L-alpha-glutamyl-L-seryl-L-alanyl-L-alpha-glutamyl-L-alanyl-L-phenylalanyl-L-prolyl-L-leucyl-L-alpha-glutamyl-L-phenylalanine" EXACT IUPAC:NAME [IUPAC] +synonym: "L-seryl-L-tyrosyl-L-seryl-L-methionyl-L-alpha-glutamyl-L-histidyl-L-phenylalanyl-L-arginyl-L-tryptophylglycyl-L-lysyl-L-prolyl-L-valylglycyl-L-lysyl-L-lysyl-L-arginyl-L-arginyl-L-prolyl-L-valyl-L-lysyl-L-valyl-L-tyrosyl-L-prolyl-L-alpha-aspartylglycyl-L-alanyl-L-alpha-glutamyl-L-alpha-aspartyl-L-alpha-glutamyl-L-seryl-L-alanyl-L-alpha-glutamyl-L-alanyl-L-phenylalanyl-L-prolyl-L-leucyl-L-alpha-glutamyl-L-phenylalanine" RELATED IUPAC:NAME [iupac] +synonym: "SYSMEHFRWGKPVGKKRRPVKVYPDGAEDQLAEAFPLEF" RELATED [drugbank] +xref: cas:9002-60-2 {source="cas"} +xref: drugbank:DB01285 {source="drugbank"} +xref: drugcentral:4931 {source="drugcentral"} +xref: kegg.compound:C02017 {source="kegg.compound"} +xref: kegg.drug:D00146 {source="kegg.drug"} is_a: CHEBI:15841 ! polypeptide is_a: CHEBI:25905 ! peptide hormone is_a: CHEBI:33694 ! biomacromolecule @@ -10073,11 +10524,11 @@ name: indole alkaloid alt_id: CHEBI:24795 alt_id: CHEBI:5901 def: "An alkaloid containing an indole skeleton." [] -subset: 3_STAR -synonym: "Indole alkaloid" EXACT [KEGG_COMPOUND] -synonym: "indole alkaloids" RELATED [ChEBI] -xref: KEGG:C06073 -xref: Wikipedia:Indole_alkaloid +subset: 3:STAR +synonym: "Indole alkaloid" RELATED [kegg.compound] +synonym: "indole alkaloids" RELATED [chebi] +xref: kegg.compound:C06073 {source="kegg.compound"} +xref: wikipedia.en:Indole_alkaloid {source="wikipedia.en"} is_a: CHEBI:22315 ! alkaloid relationship: has_part CHEBI:73398 ! indole skeleton @@ -10085,102 +10536,106 @@ relationship: has_part CHEBI:73398 ! indole skeleton id: CHEBI:38975 name: methylbenzene def: "Any alkylbenzene that is benzene substituted with one or more methyl groups." [] -subset: 3_STAR -synonym: "methylbenzenes" RELATED [ChEBI] +subset: 3:STAR +synonym: "methylbenzenes" RELATED [chebi] is_a: CHEBI:38976 ! alkylbenzene [Term] id: CHEBI:38976 name: alkylbenzene def: "A monocyclic arene that is benzene substituted with one or more alkyl groups." [] -subset: 3_STAR -synonym: "alkylbenzene" EXACT [ChEBI] -synonym: "alkylbenzenes" RELATED [ChEBI] -synonym: "Alkylbenzol" RELATED [ChEBI] +subset: 3:STAR +synonym: "alkylbenzene" RELATED [chebi] +synonym: "alkylbenzenes" RELATED [chebi] +synonym: "Alkylbenzol" RELATED [chebi] is_a: CHEBI:22712 ! benzenes is_a: CHEBI:33847 ! monocyclic arene -relationship: has_parent_hydride CHEBI:16716 ! benzene +relationship: RO:0018040 CHEBI:16716 ! has parent hydride benzene [Term] id: CHEBI:39015 name: apolipoprotein def: "Protein component on the surface of lipoprotein." [] -subset: 3_STAR -synonym: "apolipoproteins" RELATED [ChEBI] +subset: 3:STAR +synonym: "apolipoproteins" RELATED [chebi] is_a: CHEBI:13850 ! apoprotein [Term] id: CHEBI:39022 name: inclusion compound def: "A complex in which one component (the host) forms a cavity or, in the case of a crystal, a crystal lattice containing spaces in the shape of long tunnels or channels in which molecular entities of a second chemical species (the guest) are located. There is no covalent bonding between guest and host, the attraction being generally due to van der Waals forces." [] -subset: 3_STAR -synonym: "compose d'inclusion" RELATED [IUPAC] -synonym: "compuesto de inclusion" RELATED [IUPAC] -synonym: "compuestos de inclusion" RELATED [IUPAC] -synonym: "inclusion complex" RELATED [IUPAC] -synonym: "inclusion compound" EXACT IUPAC_NAME [IUPAC] -synonym: "inclusion compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "compose d'inclusion" RELATED [iupac] +synonym: "compuesto de inclusion" RELATED [iupac] +synonym: "compuestos de inclusion" RELATED [iupac] +synonym: "inclusion complex" RELATED [iupac] +synonym: "inclusion compound" EXACT IUPAC:NAME [IUPAC] +synonym: "inclusion compound" RELATED IUPAC:NAME [iupac] +synonym: "inclusion compounds" RELATED [chebi] is_a: CHEBI:50967 ! non-covalently-bound molecular entity [Term] id: CHEBI:39024 name: clathrate compound def: "Inclusion compound in which the guest molecule is in a cage formed by the host molecule or by a lattice of host molecules." [] -subset: 3_STAR -synonym: "cage compound" RELATED [IUPAC] -synonym: "Clathrat" RELATED [ChEBI] -synonym: "clathrate" RELATED [IUPAC] -synonym: "clathrate compounds" RELATED [ChEBI] -synonym: "clathrates" EXACT IUPAC_NAME [IUPAC] -synonym: "Clathratverbindung" RELATED [ChEBI] -synonym: "clatrato" RELATED [IUPAC] -synonym: "clatratos" RELATED [IUPAC] -synonym: "compuesto de clatrato" RELATED [ChEBI] -synonym: "Klathrat" RELATED [ChEBI] -synonym: "Klathratverbindung" RELATED [ChEBI] +subset: 3:STAR +synonym: "cage compound" RELATED [iupac] +synonym: "Clathrat" RELATED [chebi] +synonym: "clathrate" RELATED [iupac] +synonym: "clathrate compounds" RELATED [chebi] +synonym: "clathrates" EXACT IUPAC:NAME [IUPAC] +synonym: "clathrates" RELATED IUPAC:NAME [iupac] +synonym: "Clathratverbindung" RELATED [chebi] +synonym: "clatrato" RELATED [iupac] +synonym: "clatratos" RELATED [iupac] +synonym: "compuesto de clatrato" RELATED [chebi] +synonym: "Klathrat" RELATED [chebi] +synonym: "Klathratverbindung" RELATED [chebi] is_a: CHEBI:39022 ! inclusion compound [Term] id: CHEBI:39123 name: calcium cation -subset: 3_STAR -synonym: "calcium cation" EXACT [ChEBI] -synonym: "calcium cations" RELATED [ChEBI] +subset: 3:STAR +synonym: "calcium cation" RELATED [chebi] +synonym: "calcium cations" RELATED [chebi] is_a: CHEBI:33513 ! alkaline earth cation is_a: CHEBI:39124 ! calcium ion [Term] id: CHEBI:39124 name: calcium ion -subset: 3_STAR -synonym: "calcium ion" EXACT [ChEBI] -synonym: "calcium ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "calcium ion" RELATED [chebi] +synonym: "calcium ions" RELATED [chebi] is_a: CHEBI:25213 ! metal cation is_a: CHEBI:35155 ! elemental calcium [Term] id: CHEBI:39141 name: Bronsted acid -def: "A molecular entity capable of donating a hydron to an acceptor (Bronsted base)." [] -subset: 3_STAR -synonym: "acide de Bronsted" RELATED [IUPAC] -synonym: "Bronsted acid" EXACT IUPAC_NAME [IUPAC] -synonym: "Bronsted-Saeure" RELATED [ChEBI] -synonym: "donneur d'hydron" RELATED [IUPAC] -synonym: "hydron donor" RELATED [IUPAC] +def: "A molecular entity capable of donating a hydron to an acceptor (Brønsted base)." [] +subset: 3:STAR +synonym: "acide de Bronsted" RELATED [iupac] +synonym: "Bronsted acid" EXACT IUPAC:NAME [IUPAC] +synonym: "Bronsted acid" RELATED IUPAC:NAME [iupac] +synonym: "Bronsted-Saeure" RELATED [chebi] +synonym: "donneur d'hydron" RELATED [iupac] +synonym: "hydron donor" RELATED [iupac] is_a: CHEBI:17891 ! donor is_a: CHEBI:37527 ! acid [Term] id: CHEBI:39142 name: Bronsted base -def: "A molecular entity capable of accepting a hydron from a donor (Bronsted acid)." [] -subset: 3_STAR -synonym: "accepteur d'hydron" RELATED [IUPAC] -synonym: "base de Bronsted" RELATED [IUPAC] -synonym: "Bronsted base" EXACT IUPAC_NAME [IUPAC] -synonym: "Bronsted-Base" RELATED [ChEBI] -synonym: "hydron acceptor" RELATED [IUPAC] +def: "A molecular entity capable of accepting a hydron from a donor (Brønsted acid)." [] +subset: 3:STAR +synonym: "accepteur d'hydron" RELATED [iupac] +synonym: "base de Bronsted" RELATED [iupac] +synonym: "Bronsted base" EXACT IUPAC:NAME [IUPAC] +synonym: "Bronsted base" RELATED IUPAC:NAME [iupac] +synonym: "Bronsted-Base" RELATED [chebi] +synonym: "hydron acceptor" RELATED [iupac] is_a: CHEBI:15339 ! acceptor is_a: CHEBI:22695 ! base @@ -10188,12 +10643,13 @@ is_a: CHEBI:22695 ! base id: CHEBI:39144 name: Lewis base def: "A molecular entity able to provide a pair of electrons and thus capable of forming a covalent bond with an electron-pair acceptor (Lewis acid), thereby producing a Lewis adduct." [] -subset: 3_STAR -synonym: "base de Lewis" RELATED [IUPAC] -synonym: "donneur d'une paire d'electrons" RELATED [ChEBI] -synonym: "electron donor" RELATED [ChEBI] -synonym: "Lewis base" EXACT IUPAC_NAME [IUPAC] -synonym: "Lewis-Base" RELATED [ChEBI] +subset: 3:STAR +synonym: "base de Lewis" RELATED [iupac] +synonym: "donneur d'une paire d'electrons" RELATED [chebi] +synonym: "electron donor" RELATED [chebi] +synonym: "Lewis base" EXACT IUPAC:NAME [IUPAC] +synonym: "Lewis base" RELATED IUPAC:NAME [iupac] +synonym: "Lewis-Base" RELATED [chebi] is_a: CHEBI:17891 ! donor is_a: CHEBI:22695 ! base @@ -10201,13 +10657,13 @@ is_a: CHEBI:22695 ! base id: CHEBI:39418 name: straight-chain saturated fatty acid def: "Any saturated fatty acid lacking a side-chain." [] -subset: 3_STAR -synonym: "straight-chain saturated fatty acid" EXACT [ChEBI] -synonym: "straight-chain saturated fatty acids" RELATED [ChEBI] -xref: PMID:15644336 {source="Europe PMC"} +subset: 3:STAR +synonym: "straight-chain saturated fatty acid" RELATED [chebi] +synonym: "straight-chain saturated fatty acids" RELATED [chebi] +xref: pubmed:15644336 {source="pubmed"} is_a: CHEBI:26607 ! saturated fatty acid is_a: CHEBI:59202 ! straight-chain fatty acid -relationship: is_conjugate_acid_of CHEBI:58954 ! straight-chain saturated fatty acid anion +relationship: RO:0018034 CHEBI:58954 ! is protonated form of straight-chain saturated fatty acid anion [Term] id: CHEBI:39745 @@ -10215,30 +10671,36 @@ name: dihydrogenphosphate alt_id: CHEBI:29137 alt_id: CHEBI:39739 def: "A monovalent inorganic anion that consists of phosphoric acid in which one of the three OH groups has been deprotonated." [] -subset: 3_STAR -synonym: "[PO2(OH)2](-)" RELATED [IUPAC] -synonym: "dihydrogen(tetraoxidophosphate)(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "dihydrogenphosphate" EXACT IUPAC_NAME [IUPAC] -synonym: "DIHYDROGENPHOSPHATE ION" RELATED [PDBeChem] -synonym: "dihydrogentetraoxophosphate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "dihydrogentetraoxophosphate(V)" EXACT IUPAC_NAME [IUPAC] -synonym: "dihydroxidodioxidophosphate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "H2PO4(-)" RELATED [IUPAC] -xref: DrugBank:DB02831 -xref: Gmelin:1999 {source="Gmelin"} -xref: PDBeChem:2HP +subset: 3:STAR +synonym: "[PO2(OH)2](-)" RELATED [iupac] +synonym: "dihydrogen(tetraoxidophosphate)(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydrogen(tetraoxidophosphate)(1-)" RELATED IUPAC:NAME [iupac] +synonym: "dihydrogenphosphate" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydrogenphosphate" RELATED IUPAC:NAME [iupac] +synonym: "DIHYDROGENPHOSPHATE ION" RELATED [pdb-ccd] +synonym: "dihydrogentetraoxophosphate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydrogentetraoxophosphate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "dihydrogentetraoxophosphate(V)" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydrogentetraoxophosphate(V)" RELATED IUPAC:NAME [iupac] +synonym: "dihydroxidodioxidophosphate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "dihydroxidodioxidophosphate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "H2PO4(-)" RELATED [iupac] +xref: drugbank:DB02831 {source="drugbank"} +xref: gmelin:1999 {source="gmelin"} +xref: pdb-ccd:2HP {source="pdb-ccd"} is_a: CHEBI:35780 ! phosphate ion is_a: CHEBI:79389 ! monovalent inorganic anion -relationship: is_conjugate_acid_of CHEBI:43474 ! hydrogenphosphate -relationship: is_conjugate_base_of CHEBI:26078 ! phosphoric acid +relationship: RO:0018033 CHEBI:26078 ! is deprotonated form of phosphoric acid +relationship: RO:0018034 CHEBI:43474 ! is protonated form of hydrogenphosphate [Term] id: CHEBI:3992 name: cyclic ketone -subset: 3_STAR -synonym: "Cyclic ketone" EXACT [KEGG_COMPOUND] -synonym: "cyclic ketones" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C02019 +subset: 3:STAR +synonym: "Cyclic ketone" RELATED [kegg.compound] +synonym: "cyclic ketones" EXACT IUPAC:NAME [IUPAC] +synonym: "cyclic ketones" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C02019 {source="kegg.compound"} is_a: CHEBI:17087 ! ketone [Term] @@ -10246,81 +10708,83 @@ id: CHEBI:40751 name: (S)-adrenaline alt_id: CHEBI:30615 alt_id: CHEBI:40743 -def: "The S-enantiomer of adrenaline." [] -subset: 3_STAR -synonym: "(+)-3,4-dihydroxy-alpha-((methylamino)methyl)benzyl alcohol" RELATED [ChemIDplus] -synonym: "(+)-adrenaline" RELATED [IUPHAR] -synonym: "(S)-(+)-adrenaline" RELATED [ChEBI] -synonym: "(S)-4-(1-hydroxy-2-(methylamino)ethyl)pyrocatechol" RELATED [ChemIDplus] -synonym: "4-[(1S)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" EXACT IUPAC_NAME [IUPAC] -synonym: "d-adrenaline" RELATED [ChemIDplus] -synonym: "d-epinephrine" RELATED [ChemIDplus] -xref: Beilstein:2938799 {source="ChemIDplus"} -xref: CAS:150-05-0 {source="ChemIDplus"} -xref: PDBeChem:ALE -xref: Reaxys:2938799 {source="Reaxys"} +def: "The S-enantiomer of adrenaline." [] +subset: 3:STAR +synonym: "(+)-3,4-dihydroxy-alpha-((methylamino)methyl)benzyl alcohol" RELATED [chemidplus] +synonym: "(+)-adrenaline" RELATED [iuphar] +synonym: "(S)-(+)-adrenaline" RELATED [chebi] +synonym: "(S)-4-(1-hydroxy-2-(methylamino)ethyl)pyrocatechol" RELATED [chemidplus] +synonym: "4-[(1S)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" EXACT IUPAC:NAME [IUPAC] +synonym: "4-[(1S)-1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol" RELATED IUPAC:NAME [iupac] +synonym: "d-adrenaline" RELATED [chemidplus] +synonym: "d-epinephrine" RELATED [chemidplus] +xref: beilstein:2938799 {source="beilstein"} +xref: cas:150-05-0 {source="cas"} +xref: pdb-ccd:ALE {source="pdb-ccd"} +xref: reaxys:2938799 {source="reaxys"} is_a: CHEBI:194548 ! 4-[1-hydroxy-2-(methylamino)ethyl]benzene-1,2-diol -relationship: is_enantiomer_of CHEBI:28918 ! (R)-adrenaline +relationship: RO:0018039 CHEBI:28918 ! is enantiomer of (R)-adrenaline [Term] id: CHEBI:41609 name: carbonate alt_id: CHEBI:29201 alt_id: CHEBI:41605 -subset: 3_STAR -synonym: "[CO3](2-)" RELATED [IUPAC] -synonym: "carbonate" EXACT [IUPAC] -synonym: "CARBONATE ION" RELATED [PDBeChem] -synonym: "CO3(2-)" RELATED [ChEBI] -synonym: "Karbonat" RELATED [ChEBI] -synonym: "trioxidocarbonate(2-)" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:3600898 {source="Beilstein"} -xref: CAS:3812-32-6 {source="ChemIDplus"} -xref: Gmelin:1559 {source="Gmelin"} -xref: PDBeChem:CO3 +subset: 3:STAR +synonym: "[CO3](2-)" RELATED [iupac] +synonym: "carbonate" RELATED [iupac] +synonym: "CARBONATE ION" RELATED [pdb-ccd] +synonym: "CO3(2-)" RELATED [chebi] +synonym: "Karbonat" RELATED [chebi] +synonym: "trioxidocarbonate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "trioxidocarbonate(2-)" RELATED IUPAC:NAME [iupac] +xref: beilstein:3600898 {source="beilstein"} +xref: cas:3812-32-6 {source="cas"} +xref: gmelin:1559 {source="gmelin"} +xref: pdb-ccd:CO3 {source="pdb-ccd"} is_a: CHEBI:35604 ! carbon oxoanion -relationship: is_conjugate_base_of CHEBI:17544 ! hydrogencarbonate +relationship: RO:0018033 CHEBI:17544 ! is deprotonated form of hydrogencarbonate [Term] id: CHEBI:4167 name: D-glucopyranose -def: "A glucopyranose having D-configuration." [] -subset: 3_STAR -synonym: "D-Glc" RELATED [ChEBI] -synonym: "D-Glcp" RELATED [ChEBI] -synonym: "D-glucopyranose" EXACT IUPAC_NAME [IUPAC] -synonym: "D-Glucose" RELATED [KEGG_COMPOUND] -synonym: "D-glucose" RELATED [UniProt] -synonym: "Dextrose" RELATED [KEGG_COMPOUND] -synonym: "Glc-OH" RELATED [ChEBI] -synonym: "Glucose" RELATED [KEGG_COMPOUND] -synonym: "glucose" RELATED [ChEBI] -synonym: "Grape sugar" RELATED [KEGG_COMPOUND] -synonym: "WURCS=2.0/1,1,0/[a2122h-1x_1-5]/1/" RELATED [GlyTouCan] -xref: CAS:2280-44-6 {source="ChemIDplus"} -xref: GlyGen:G15021LG -xref: GlyTouCan:G15021LG -xref: Gmelin:83256 {source="Gmelin"} -xref: HMDB:HMDB0000122 -xref: KEGG:C00031 -xref: KEGG:D00009 -xref: KNApSAcK:C00001122 -xref: MetaCyc:D-Glucose -xref: PMID:15987845 {source="Europe PMC"} -xref: PMID:16901854 {source="Europe PMC"} -xref: PMID:17336832 {source="Europe PMC"} -xref: PMID:17439666 {source="Europe PMC"} -xref: PMID:17928662 {source="Europe PMC"} -xref: PMID:19913595 {source="Europe PMC"} -xref: PMID:26812026 {source="Europe PMC"} -xref: PMID:32619908 {source="Europe PMC"} -xref: PMID:7524207 {source="Europe PMC"} -xref: PMID:9140037 {source="Europe PMC"} -xref: PMID:9501190 {source="Europe PMC"} -xref: PMID:9506998 {source="Europe PMC"} -xref: PMID:9545565 {source="Europe PMC"} -xref: Reaxys:1281604 {source="Reaxys"} -xref: Wikipedia:Glucose +def: "A glucopyranose having D-configuration." [] +subset: 3:STAR +synonym: "D-Glc" RELATED [chebi] +synonym: "D-Glcp" RELATED [chebi] +synonym: "D-glucopyranose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-glucopyranose" RELATED IUPAC:NAME [iupac] +synonym: "D-Glucose" RELATED [kegg.compound] +synonym: "D-glucose" RELATED [uniprot_ft] +synonym: "Dextrose" RELATED [kegg.compound] +synonym: "Glc-OH" RELATED [chebi] +synonym: "Glucose" RELATED [kegg.compound] +synonym: "glucose" RELATED [chebi] +synonym: "Grape sugar" RELATED [kegg.compound] +xref: cas:2280-44-6 {source="cas"} +xref: glygen:G15021LG {source="glygen"} +xref: glytoucan:G15021LG {source="glytoucan"} +xref: gmelin:83256 {source="gmelin"} +xref: hmdb:HMDB0000122 {source="hmdb"} +xref: kegg.compound:C00031 {source="kegg.compound"} +xref: kegg.drug:D00009 {source="kegg.drug"} +xref: knapsack:C00001122 {source="knapsack"} +xref: metacyc.compound:D-Glucose {source="metacyc.compound"} +xref: pubmed:15987845 {source="pubmed"} +xref: pubmed:16901854 {source="pubmed"} +xref: pubmed:17336832 {source="pubmed"} +xref: pubmed:17439666 {source="pubmed"} +xref: pubmed:17928662 {source="pubmed"} +xref: pubmed:19913595 {source="pubmed"} +xref: pubmed:26812026 {source="pubmed"} +xref: pubmed:32619908 {source="pubmed"} +xref: pubmed:7524207 {source="pubmed"} +xref: pubmed:9140037 {source="pubmed"} +xref: pubmed:9501190 {source="pubmed"} +xref: pubmed:9506998 {source="pubmed"} +xref: pubmed:9545565 {source="pubmed"} +xref: reaxys:1281604 {source="reaxys"} +xref: wikipedia.en:Glucose {source="wikipedia.en"} is_a: CHEBI:17634 ! D-glucose is_a: CHEBI:37661 ! glucopyranose relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite @@ -10331,13 +10795,14 @@ relationship: RO:0000087 CHEBI:77746 ! has role human metabolite [Term] id: CHEBI:4194 name: D-hexose -def: "A hexose that has D-configuration at position 5." [] -subset: 3_STAR -synonym: "a D-hexose" RELATED [UniProt] -synonym: "D-hexopyranose" EXACT IUPAC_NAME [IUPAC] -synonym: "D-Hexose" EXACT [KEGG_COMPOUND] -synonym: "D-hexoses" RELATED [ChEBI] -xref: KEGG:C00738 +def: "A hexose that has D-configuration at position 5." [] +subset: 3:STAR +synonym: "a D-hexose" RELATED [uniprot_ft] +synonym: "D-hexopyranose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-hexopyranose" RELATED IUPAC:NAME [iupac] +synonym: "D-Hexose" RELATED [kegg.compound] +synonym: "D-hexoses" RELATED [chebi] +xref: kegg.compound:C00738 {source="kegg.compound"} is_a: CHEBI:18133 ! hexose [Term] @@ -10345,33 +10810,37 @@ id: CHEBI:42485 name: formyl group alt_id: CHEBI:24089 alt_id: CHEBI:42480 -subset: 3_STAR -synonym: "-CH(O)" RELATED [IUPAC] -synonym: "-CHO" RELATED [IUPAC] -synonym: "aldehyde group" EXACT IUPAC_NAME [IUPAC] -synonym: "carbaldehyde" EXACT IUPAC_NAME [IUPAC] -synonym: "Fo" RELATED [CBN] -synonym: "formyl" EXACT IUPAC_NAME [IUPAC] -synonym: "FORMYL GROUP" EXACT [PDBeChem] -synonym: "H-CO-" RELATED [IUPAC] -synonym: "methanoyl" RELATED [IUPAC] -xref: PDBeChem:FOR +subset: 3:STAR +synonym: "-CH(O)" RELATED [iupac] +synonym: "-CHO" RELATED [iupac] +synonym: "aldehyde group" EXACT IUPAC:NAME [IUPAC] +synonym: "aldehyde group" RELATED IUPAC:NAME [iupac] +synonym: "carbaldehyde" EXACT IUPAC:NAME [IUPAC] +synonym: "carbaldehyde" RELATED IUPAC:NAME [iupac] +synonym: "Fo" RELATED [iubmb] +synonym: "formyl" EXACT IUPAC:NAME [IUPAC] +synonym: "formyl" RELATED IUPAC:NAME [iupac] +synonym: "FORMYL GROUP" RELATED [pdb-ccd] +synonym: "H-CO-" RELATED [iupac] +synonym: "methanoyl" RELATED [iupac] +xref: pdb-ccd:FOR {source="pdb-ccd"} is_a: CHEBI:27207 ! univalent carboacyl group -relationship: is_substituent_group_from CHEBI:30751 ! formic acid +relationship: RO:0018037 CHEBI:30751 ! is substitutent group from formic acid [Term] id: CHEBI:43176 name: hydroxy group alt_id: CHEBI:24706 alt_id: CHEBI:43171 -subset: 3_STAR -synonym: "-OH" RELATED [IUPAC] -synonym: "hydroxy" EXACT IUPAC_NAME [IUPAC] -synonym: "HYDROXY GROUP" EXACT [PDBeChem] -synonym: "hydroxy group" EXACT [UniProt] -synonym: "hydroxyl" RELATED [ChEBI] -synonym: "hydroxyl group" RELATED [ChEBI] -xref: PDBeChem:OH +subset: 3:STAR +synonym: "-OH" RELATED [iupac] +synonym: "hydroxy" EXACT IUPAC:NAME [IUPAC] +synonym: "hydroxy" RELATED IUPAC:NAME [iupac] +synonym: "HYDROXY GROUP" RELATED [pdb-ccd] +synonym: "hydroxy group" RELATED [uniprot_ft] +synonym: "hydroxyl" RELATED [chebi] +synonym: "hydroxyl group" RELATED [chebi] +xref: pdb-ccd:OH {source="pdb-ccd"} is_a: CHEBI:33246 ! inorganic group [Term] @@ -10380,135 +10849,148 @@ name: hydrogenphosphate alt_id: CHEBI:29139 alt_id: CHEBI:43470 def: "A phosphate ion that is the conjugate base of dihydrogenphosphate." [] -subset: 3_STAR -synonym: "[P(OH)O3](2-)" RELATED [MolBase] -synonym: "[PO3(OH)](2-)" RELATED [IUPAC] -synonym: "HPO4(2-)" RELATED [IUPAC] -synonym: "hydrogen phosphate" RELATED [ChEBI] -synonym: "hydrogen(tetraoxidophosphate)(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogenphosphate" EXACT IUPAC_NAME [IUPAC] -synonym: "HYDROGENPHOSPHATE ION" RELATED [PDBeChem] -synonym: "hydrogentetraoxophosphate(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogentetraoxophosphate(V)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydroxidotrioxidophosphate(2-)" EXACT IUPAC_NAME [IUPAC] -synonym: "INORGANIC PHOSPHATE GROUP" RELATED [PDBeChem] -synonym: "phosphate" RELATED [UniProt] -xref: Gmelin:1998 {source="Gmelin"} -xref: MolBase:1628 -xref: PDBeChem:PI -xref: PDBeChem:PO4 +subset: 3:STAR +synonym: "[P(OH)O3](2-)" RELATED [molbase] +synonym: "[PO3(OH)](2-)" RELATED [iupac] +synonym: "HPO4(2-)" RELATED [iupac] +synonym: "hydrogen phosphate" RELATED [chebi] +synonym: "hydrogen(tetraoxidophosphate)(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen(tetraoxidophosphate)(2-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogenphosphate" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogenphosphate" RELATED IUPAC:NAME [iupac] +synonym: "HYDROGENPHOSPHATE ION" RELATED [pdb-ccd] +synonym: "hydrogentetraoxophosphate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogentetraoxophosphate(2-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogentetraoxophosphate(V)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogentetraoxophosphate(V)" RELATED IUPAC:NAME [iupac] +synonym: "hydroxidotrioxidophosphate(2-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydroxidotrioxidophosphate(2-)" RELATED IUPAC:NAME [iupac] +synonym: "INORGANIC PHOSPHATE GROUP" RELATED [pdb-ccd] +synonym: "phosphate" RELATED [uniprot_ft] +xref: gmelin:1998 {source="gmelin"} +xref: molbase:1628 {source="molbase"} +xref: pdb-ccd:PI {source="pdb-ccd"} +xref: pdb-ccd:PO4 {source="pdb-ccd"} is_a: CHEBI:35780 ! phosphate ion is_a: CHEBI:79388 ! divalent inorganic anion -relationship: is_conjugate_acid_of CHEBI:18367 ! phosphate(3-) -relationship: is_conjugate_base_of CHEBI:39745 ! dihydrogenphosphate relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:75772 ! has role Saccharomyces cerevisiae metabolite +relationship: RO:0018033 CHEBI:39745 ! is deprotonated form of dihydrogenphosphate +relationship: RO:0018034 CHEBI:18367 ! is protonated form of phosphate(3-) [Term] id: CHEBI:456216 name: ADP(3-) -def: "A nucleoside 5'-diphosphate(3-) arising from deprotonation of all three diphosphate OH groups of adenosine 5'-diphosphate (ADP); major species present at pH 7.3." [] -subset: 3_STAR -synonym: "5'-O-[(phosphonatooxy)phosphinato]adenosine" RELATED [ChEBI] -synonym: "adenosine 5'-diphosphate" EXACT IUPAC_NAME [IUPAC] -synonym: "ADP" RELATED [UniProt] -synonym: "ADP trianion" RELATED [ChEBI] -xref: Beilstein:3783669 {source="Beilstein"} -xref: Gmelin:341336 {source="Gmelin"} +def: "A nucleoside 5'-diphosphate(3−) arising from deprotonation of all three diphosphate OH groups of adenosine 5'-diphosphate (ADP); major species present at pH 7.3." [] +subset: 3:STAR +synonym: "5'-O-[(phosphonatooxy)phosphinato]adenosine" RELATED [chebi] +synonym: "adenosine 5'-diphosphate" EXACT IUPAC:NAME [IUPAC] +synonym: "adenosine 5'-diphosphate" RELATED IUPAC:NAME [iupac] +synonym: "ADP" RELATED [uniprot_ft] +synonym: "ADP trianion" RELATED [chebi] +xref: beilstein:3783669 {source="beilstein"} +xref: gmelin:341336 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:57930 ! nucleoside 5'-diphosphate(3-) -relationship: is_conjugate_base_of CHEBI:16761 ! ADP -relationship: is_conjugate_base_of CHEBI:87518 ! ADP(2-) relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:16761 ! is deprotonated form of ADP +relationship: RO:0018033 CHEBI:87518 ! is deprotonated form of ADP(2-) [Term] id: CHEBI:45696 name: hydrogensulfate alt_id: CHEBI:29199 alt_id: CHEBI:45693 -subset: 3_STAR -synonym: "[SO3(OH)](-)" RELATED [IUPAC] -synonym: "HSO4(-)" RELATED [IUPAC] -synonym: "HYDROGEN SULFATE" RELATED [PDBeChem] -synonym: "hydrogen(tetraoxidosulfate)(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogensulfate" EXACT [IUPAC] -synonym: "hydrogensulfate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogentetraoxosulfate(1-)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogentetraoxosulfate(VI)" EXACT IUPAC_NAME [IUPAC] -synonym: "hydroxidotrioxidosulfate(1-)" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:2121 {source="Gmelin"} +subset: 3:STAR +synonym: "[SO3(OH)](-)" RELATED [iupac] +synonym: "HSO4(-)" RELATED [iupac] +synonym: "HYDROGEN SULFATE" RELATED [pdb-ccd] +synonym: "hydrogen(tetraoxidosulfate)(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen(tetraoxidosulfate)(1-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogensulfate" RELATED [iupac] +synonym: "hydrogensulfate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogensulfate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogentetraoxosulfate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogentetraoxosulfate(1-)" RELATED IUPAC:NAME [iupac] +synonym: "hydrogentetraoxosulfate(VI)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogentetraoxosulfate(VI)" RELATED IUPAC:NAME [iupac] +synonym: "hydroxidotrioxidosulfate(1-)" EXACT IUPAC:NAME [IUPAC] +synonym: "hydroxidotrioxidosulfate(1-)" RELATED IUPAC:NAME [iupac] +xref: gmelin:2121 {source="gmelin"} is_a: CHEBI:33482 ! sulfur oxoanion -relationship: is_conjugate_acid_of CHEBI:16189 ! sulfate -relationship: is_conjugate_base_of CHEBI:26836 ! sulfuric acid +relationship: RO:0018033 CHEBI:26836 ! is deprotonated form of sulfuric acid +relationship: RO:0018034 CHEBI:16189 ! is protonated form of sulfate [Term] id: CHEBI:46209 name: L-tyrosinal alt_id: CHEBI:46188 -def: "An amino aldehyde that is L-tyrosine in which the carboxy group has undergone formal redution to give the corrresponding aldehyde" [] -subset: 3_STAR -synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanal" EXACT IUPAC_NAME [IUPAC] -synonym: "(2S)-2-amino-3-(p-hydroxyphenyl)propanal" RELATED [ChEBI] -synonym: "L-tyr aldehyde" RELATED [ChEBI] -synonym: "TYROSINAL" RELATED [PDBeChem] -xref: MetaCyc:CPD-21526 -xref: PDBeChem:TYB -xref: PMID:23281040 {source="Europe PMC"} +def: "An amino aldehyde that is L-tyrosine in which the carboxy group has undergone formal redution to give the corrresponding aldehyde" [] +subset: 3:STAR +synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanal" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-amino-3-(4-hydroxyphenyl)propanal" RELATED IUPAC:NAME [iupac] +synonym: "(2S)-2-amino-3-(p-hydroxyphenyl)propanal" RELATED [chebi] +synonym: "L-tyr aldehyde" RELATED [chebi] +synonym: "TYROSINAL" RELATED [pdb-ccd] +xref: metacyc.compound:CPD-21526 {source="metacyc.compound"} +xref: pdb-ccd:TYB {source="pdb-ccd"} +xref: pubmed:23281040 {source="pubmed"} is_a: CHEBI:22492 ! amino aldehyde is_a: CHEBI:33853 ! phenols is_a: CHEBI:50994 ! primary amino compound -relationship: is_conjugate_base_of CHEBI:141668 ! L-tyrosinal(1+) +relationship: RO:0018033 CHEBI:141668 ! is deprotonated form of L-tyrosinal(1+) [Term] id: CHEBI:46629 name: oxo group alt_id: CHEBI:29353 alt_id: CHEBI:44607 -subset: 3_STAR -synonym: "=O" RELATED [IUPAC] -synonym: "oxo" EXACT IUPAC_NAME [IUPAC] -synonym: "OXO GROUP" EXACT [PDBeChem] -xref: PDBeChem:O +subset: 3:STAR +synonym: "=O" RELATED [iupac] +synonym: "oxo" EXACT IUPAC:NAME [IUPAC] +synonym: "oxo" RELATED IUPAC:NAME [iupac] +synonym: "OXO GROUP" RELATED [pdb-ccd] +xref: pdb-ccd:O {source="pdb-ccd"} is_a: CHEBI:33246 ! inorganic group [Term] id: CHEBI:46662 name: mineral def: "In general, a mineral is a chemical substance that is normally crystalline formed and has been formed as a result of geological processes. The term also includes metamict substances (naturally occurring, formerly crystalline substances whose crystallinity has been destroyed by ionising radiation) and can include naturally occurring amorphous substances that have never been crystalline ('mineraloids') such as georgite and calciouranoite as well as substances formed by the action of geological processes on bigenic compounds ('biogenic minerals')." [] -subset: 3_STAR -synonym: "mineral" EXACT [ChEBI] -synonym: "Minerale" RELATED [ChEBI] -synonym: "minerales" RELATED [ChEBI] -synonym: "minerals" RELATED [ChEBI] -synonym: "mineraux" RELATED [ChEBI] -xref: Wikipedia:Mineral +subset: 3:STAR +synonym: "mineral" RELATED [chebi] +synonym: "Minerale" RELATED [chebi] +synonym: "minerales" RELATED [chebi] +synonym: "minerals" RELATED [chebi] +synonym: "mineraux" RELATED [chebi] +xref: wikipedia.en:Mineral {source="wikipedia.en"} is_a: CHEBI:59999 ! chemical substance [Term] id: CHEBI:46721 name: carbonate salt -subset: 3_STAR -synonym: "carbonate salts" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbonate salts" RELATED [chebi] is_a: CHEBI:23016 ! carbonates relationship: has_part CHEBI:41609 ! carbonate [Term] id: CHEBI:46723 name: phosphate mineral -subset: 3_STAR -synonym: "phosphate minerals" RELATED [ChEBI] +subset: 3:STAR +synonym: "phosphate minerals" RELATED [chebi] is_a: CHEBI:46662 ! mineral [Term] id: CHEBI:46787 name: solvent def: "A liquid that can dissolve other substances (solutes) without any change in their chemical composition." [] -subset: 3_STAR -synonym: "Loesungsmittel" RELATED [ChEBI] -synonym: "solvant" RELATED [ChEBI] -synonym: "solvents" RELATED [ChEBI] -xref: Wikipedia:Solvent +subset: 3:STAR +synonym: "Loesungsmittel" RELATED [chebi] +synonym: "solvant" RELATED [chebi] +synonym: "solvents" RELATED [chebi] +xref: wikipedia.en:Solvent {source="wikipedia.en"} is_a: CHEBI:33232 ! application is_a: CHEBI:51086 ! chemical role @@ -10517,55 +10999,60 @@ id: CHEBI:46858 name: L-tyrosine residue alt_id: CHEBI:29975 alt_id: CHEBI:46207 -subset: 3_STAR -synonym: "L-tyrosine" RELATED [RESID] -synonym: "L-tyrosine acid residue" RELATED [JCBN] -synonym: "L-tyrosine residue" EXACT [JCBN, UniProt] -synonym: "L-tyrosyl" RELATED [ChEBI] -synonym: "Tyr" RELATED [JCBN] -synonym: "Y" RELATED [JCBN] -xref: PDBeChem:TYR_LL -xref: RESID:AA0019 +subset: 3:STAR +synonym: "L-tyrosine" EXACT [RESID] +synonym: "L-tyrosine" RELATED [resid] +synonym: "L-tyrosine acid residue" RELATED [jcbn] +synonym: "L-tyrosine residue" RELATED [jcbn, uniprot_ft] +synonym: "L-tyrosyl" RELATED [chebi] +synonym: "Tyr" RELATED [jcbn] +synonym: "Y" RELATED [jcbn] +xref: pdb-ccd:TYR_LL {source="pdb-ccd"} +xref: resid:AA0019 {source="resid"} is_a: CHEBI:32789 ! tyrosine residue is_a: CHEBI:33700 ! proteinogenic amino-acid residue is_a: CHEBI:83228 ! L-alpha-amino acid residue is_a: PR:000049928 ! amino-acid residue related to L-tyrosine -relationship: is_enantiomer_of CHEBI:29976 ! D-tyrosine residue -relationship: is_substituent_group_from CHEBI:17895 ! L-tyrosine +relationship: RO:0018037 CHEBI:17895 ! is substitutent group from L-tyrosine +relationship: RO:0018039 CHEBI:29976 ! is enantiomer of D-tyrosine residue [Term] id: CHEBI:46883 name: carboxy group alt_id: CHEBI:23025 alt_id: CHEBI:41420 -subset: 3_STAR -synonym: "-C(O)OH" RELATED [IUPAC] -synonym: "-CO2H" RELATED [ChEBI] -synonym: "-COOH" RELATED [IUPAC] -synonym: "carboxy" EXACT IUPAC_NAME [IUPAC] -synonym: "CARBOXY GROUP" EXACT [PDBeChem] -synonym: "carboxyl group" RELATED [ChEBI] -xref: PDBeChem:FMT +subset: 3:STAR +synonym: "-C(O)OH" RELATED [iupac] +synonym: "-CO2H" RELATED [chebi] +synonym: "-COOH" RELATED [iupac] +synonym: "carboxy" EXACT IUPAC:NAME [IUPAC] +synonym: "carboxy" RELATED IUPAC:NAME [iupac] +synonym: "CARBOXY GROUP" RELATED [pdb-ccd] +synonym: "carboxyl group" RELATED [chebi] +xref: pdb-ccd:FMT {source="pdb-ccd"} is_a: CHEBI:33249 ! organyl group [Term] id: CHEBI:46997 name: L-ribose -def: "A ribose in which the chiral carbon atom furthest away from the aldehyde group (C4') has the same configuration as in L-glyceraldehyde." [] -subset: 3_STAR -synonym: "L-Rib" RELATED [JCBN] -synonym: "L-ribo-pentose" EXACT IUPAC_NAME [IUPAC] -synonym: "L-ribose" EXACT IUPAC_NAME [IUPAC] +def: "A ribose in which the chiral carbon atom furthest away from the aldehyde group (C4') has the same configuration as in L-glyceraldehyde." [] +subset: 3:STAR +synonym: "L-Rib" RELATED [jcbn] +synonym: "L-ribo-pentose" EXACT IUPAC:NAME [IUPAC] +synonym: "L-ribo-pentose" RELATED IUPAC:NAME [iupac] +synonym: "L-ribose" EXACT IUPAC:NAME [IUPAC] +synonym: "L-ribose" RELATED IUPAC:NAME [iupac] is_a: CHEBI:33942 ! ribose -relationship: is_enantiomer_of CHEBI:16988 ! D-ribose +relationship: RO:0018039 CHEBI:16988 ! is enantiomer of D-ribose [Term] id: CHEBI:46998 name: ribofuranose def: "A cyclic ribose having a 5-membered tetrahydrofuran ring; the predominant (C3'-endo) form of the two cyclic structures (the other is the \"C2'-endo\" form, having a 6-membered ring) adopted by ribose in aqueous solution." [] -subset: 3_STAR -synonym: "rel-(3R,4S,5R)-5-(hydroxymethyl)tetrahydrofuran-2,3,4-triol" RELATED [IUPAC] -synonym: "ribofuranose" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "rel-(3R,4S,5R)-5-(hydroxymethyl)tetrahydrofuran-2,3,4-triol" RELATED [iupac] +synonym: "ribofuranose" EXACT IUPAC:NAME [IUPAC] +synonym: "ribofuranose" RELATED IUPAC:NAME [iupac] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33942 ! ribose relationship: RO:0000087 CHEBI:84735 ! has role algal metabolite @@ -10575,38 +11062,39 @@ id: CHEBI:47013 name: D-ribofuranose alt_id: CHEBI:4233 alt_id: CHEBI:46999 -def: "A ribofuranose having D-configuration." [] -subset: 3_STAR -synonym: "(3R,4S,5R)-5-(hydroxymethyl)tetrahydrofuran-2,3,4-triol" RELATED [IUPAC] -synonym: "D-ribofuranose" EXACT IUPAC_NAME [IUPAC] -synonym: "D-Ribose" RELATED [KEGG_COMPOUND] -synonym: "D-ribose" RELATED [UniProt] -synonym: "ribose" RELATED [ChemIDplus] -synonym: "WURCS=2.0/1,1,0/[a222h-1x_1-4]/1/" RELATED [GlyTouCan] -xref: Beilstein:1904878 {source="Beilstein"} -xref: CAS:50-69-1 {source="KEGG COMPOUND"} -xref: CAS:613-83-2 {source="ChemIDplus"} -xref: GlyTouCan:G31080DL -xref: Gmelin:364108 {source="Gmelin"} -xref: KEGG:C00121 -xref: Patent:US2152662 -xref: PMID:9506998 {source="Europe PMC"} -xref: Reaxys:1904878 {source="Reaxys"} +def: "A ribofuranose having D-configuration." [] +subset: 3:STAR +synonym: "(3R,4S,5R)-5-(hydroxymethyl)tetrahydrofuran-2,3,4-triol" RELATED [iupac] +synonym: "D-ribofuranose" EXACT IUPAC:NAME [IUPAC] +synonym: "D-ribofuranose" RELATED IUPAC:NAME [iupac] +synonym: "D-Ribose" EXACT [KEGG_COMPOUND] +synonym: "D-Ribose" RELATED [kegg.compound] +synonym: "D-ribose" RELATED [uniprot_ft] +synonym: "ribose" RELATED [chemidplus] +xref: beilstein:1904878 {source="beilstein"} +xref: cas:50-69-1 {source="cas"} +xref: cas:613-83-2 {source="cas"} +xref: glytoucan:G31080DL {source="glytoucan"} +xref: gmelin:364108 {source="gmelin"} +xref: kegg.compound:C00121 {source="kegg.compound"} +xref: patent:US2152662 {source="patent"} +xref: pubmed:9506998 {source="pubmed"} +xref: reaxys:1904878 {source="reaxys"} is_a: CHEBI:16988 ! D-ribose is_a: CHEBI:46998 ! ribofuranose [Term] id: CHEBI:47017 name: tetrahydrofuranol -subset: 3_STAR -synonym: "tetrahydrofuranols" RELATED [ChEBI] +subset: 3:STAR +synonym: "tetrahydrofuranols" RELATED [chebi] is_a: CHEBI:26912 ! oxolanes [Term] id: CHEBI:47019 name: dihydroxytetrahydrofuran -subset: 3_STAR -synonym: "dihydroxytetrahydrofurans" RELATED [ChEBI] +subset: 3:STAR +synonym: "dihydroxytetrahydrofurans" RELATED [chebi] is_a: CHEBI:47017 ! tetrahydrofuranol [Term] @@ -10617,18 +11105,18 @@ alt_id: CHEBI:13799 alt_id: CHEBI:22189 alt_id: CHEBI:2406 def: "Any carboxylic ester where the carboxylic acid component is acetic acid." [] -subset: 3_STAR -synonym: "acetate" RELATED [ChEBI] -synonym: "acetate esters" RELATED [ChEBI] -synonym: "acetates" RELATED [ChEBI] -synonym: "Acetic ester" RELATED [KEGG_COMPOUND] -synonym: "Acetyl ester" RELATED [KEGG_COMPOUND] -synonym: "acetyl esters" RELATED [ChEBI] -synonym: "an acetyl ester" RELATED [UniProt] -xref: KEGG:C01883 -xref: Wikipedia:Acetate#Esters +subset: 3:STAR +synonym: "acetate" RELATED [chebi] +synonym: "acetate esters" RELATED [chebi] +synonym: "acetates" RELATED [chebi] +synonym: "Acetic ester" RELATED [kegg.compound] +synonym: "Acetyl ester" RELATED [kegg.compound] +synonym: "acetyl esters" RELATED [chebi] +synonym: "an acetyl ester" RELATED [uniprot_ft] +xref: kegg.compound:C01883 {source="kegg.compound"} +xref: wikipedia.en:Acetate#Esters {source="wikipedia.en"} is_a: CHEBI:33308 ! carboxylic ester -relationship: has_functional_parent CHEBI:15366 ! acetic acid +relationship: RO:0018038 CHEBI:15366 ! has functional parent acetic acid [Term] id: CHEBI:47788 @@ -10638,35 +11126,36 @@ alt_id: CHEBI:1653 alt_id: CHEBI:20182 alt_id: CHEBI:71186 def: "Any oxo steroid where an oxo substituent is located at position 3." [] -subset: 3_STAR -synonym: "3-oxo steroids" RELATED [ChEBI] -synonym: "3-Oxosteroid" RELATED [KEGG_COMPOUND] -synonym: "3-oxosteroids" RELATED [ChEBI] -synonym: "a 3-oxosteroid" RELATED [UniProt] -xref: KEGG:C01876 -xref: MetaCyc:3-Oxosteroids -xref: PMID:9811880 {source="SUBMITTER"} +subset: 3:STAR +synonym: "3-oxo steroids" RELATED [chebi] +synonym: "3-Oxosteroid" RELATED [kegg.compound] +synonym: "3-oxosteroids" RELATED [chebi] +synonym: "a 3-oxosteroid" RELATED [uniprot_ft] +xref: kegg.compound:C01876 {source="kegg.compound"} +xref: metacyc.compound:3-Oxosteroids {source="metacyc.compound"} +xref: pubmed:9811880 {source="pubmed"} is_a: CHEBI:35789 ! oxo steroid is_a: CHEBI:3992 ! cyclic ketone [Term] id: CHEBI:47882 name: cyclic polypyrrole -subset: 3_STAR -synonym: "cyclic polypyrroles" RELATED [ChEBI] -synonym: "macrocyclic polypyrroles" EXACT IUPAC_NAME [IUPAC] -synonym: "polypyrrole macrocycles" RELATED [ChEBI] +subset: 3:STAR +synonym: "cyclic polypyrroles" RELATED [chebi] +synonym: "macrocyclic polypyrroles" EXACT IUPAC:NAME [IUPAC] +synonym: "macrocyclic polypyrroles" RELATED IUPAC:NAME [iupac] +synonym: "polypyrrole macrocycles" RELATED [chebi] is_a: CHEBI:38077 ! polypyrrole [Term] id: CHEBI:47891 name: steroid acid def: "Any steroid substituted by at least one carboxy group." [] -subset: 3_STAR -synonym: "steroid acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "steroid acids" RELATED [chebi] is_a: CHEBI:35341 ! steroid is_a: CHEBI:64709 ! organic acid -relationship: is_conjugate_acid_of CHEBI:50160 ! steroid acid anion +relationship: RO:0018034 CHEBI:50160 ! is protonated form of steroid acid anion [Term] id: CHEBI:47909 @@ -10674,15 +11163,15 @@ name: 3-oxo-Delta(4) steroid alt_id: CHEBI:13604 alt_id: CHEBI:1626 alt_id: CHEBI:20157 -def: "A 3-oxo steroid conjugated to a C=C double bond at the alpha,beta position." [] -subset: 3_STAR -synonym: "3-oxo Delta(4)-steroid" RELATED [ChEBI] -synonym: "3-oxo Delta(4)-steroids" RELATED [ChEBI] -synonym: "3-oxo-Delta(4) steroids" RELATED [ChEBI] -synonym: "3-Oxo-delta4-steroid" RELATED [KEGG_COMPOUND] -synonym: "a 3-oxo-Delta(4)-steroid" RELATED [UniProt] -xref: KEGG:C00619 -xref: MetaCyc:3-Oxo-Delta-4-Steroids +def: "A 3-oxo steroid conjugated to a C=C double bond at the α,β position." [] +subset: 3:STAR +synonym: "3-oxo Delta(4)-steroid" RELATED [chebi] +synonym: "3-oxo Delta(4)-steroids" RELATED [chebi] +synonym: "3-oxo-Delta(4) steroids" RELATED [chebi] +synonym: "3-Oxo-delta4-steroid" RELATED [kegg.compound] +synonym: "a 3-oxo-Delta(4)-steroid" RELATED [uniprot_ft] +xref: kegg.compound:C00619 {source="kegg.compound"} +xref: metacyc.compound:3-Oxo-Delta-4-Steroids {source="metacyc.compound"} is_a: CHEBI:47788 ! 3-oxo steroid is_a: CHEBI:51689 ! enone relationship: has_part CHEBI:136849 ! 3-oxo-Delta(4)-steroid group @@ -10690,10 +11179,10 @@ relationship: has_part CHEBI:136849 ! 3-oxo-Delta(4)-steroid group [Term] id: CHEBI:48154 name: sulfur oxide -subset: 3_STAR -synonym: "oxides of sulfur" RELATED [ChEBI] -synonym: "Schwefeloxide" RELATED [ChEBI] -synonym: "sulfur oxides" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxides of sulfur" RELATED [chebi] +synonym: "Schwefeloxide" RELATED [chebi] +synonym: "sulfur oxides" RELATED [chebi] is_a: CHEBI:24836 ! inorganic oxide is_a: CHEBI:26835 ! sulfur molecular entity @@ -10701,23 +11190,26 @@ is_a: CHEBI:26835 ! sulfur molecular entity id: CHEBI:48354 name: polar solvent def: "A solvent that is composed of polar molecules. Polar solvents can dissolve ionic compounds or ionisable covalent compounds." [] -subset: 3_STAR -synonym: "polar solvent" EXACT IUPAC_NAME [IUPAC] -synonym: "polar solvents" RELATED [ChEBI] +subset: 3:STAR +synonym: "polar solvent" EXACT IUPAC:NAME [IUPAC] +synonym: "polar solvent" RELATED IUPAC:NAME [iupac] +synonym: "polar solvents" RELATED [chebi] is_a: CHEBI:46787 ! solvent [Term] id: CHEBI:48355 name: non-polar solvent -subset: 1_STAR +subset: 1:STAR +synonym: "non-polar solvents" RELATED [chebi] is_a: CHEBI:46787 ! solvent [Term] id: CHEBI:48356 name: protic solvent def: "A polar solvent that is capable of acting as a hydron (proton) donor." [] -subset: 3_STAR -synonym: "protogenic solvent" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "protogenic solvent" EXACT IUPAC:NAME [IUPAC] +synonym: "protogenic solvent" RELATED IUPAC:NAME [iupac] is_a: CHEBI:39141 ! Bronsted acid is_a: CHEBI:48354 ! polar solvent @@ -10725,107 +11217,111 @@ is_a: CHEBI:48354 ! polar solvent id: CHEBI:48359 name: protophilic solvent def: "Solvent that is capable of acting as a hydron (proton) acceptor." [] -subset: 3_STAR -synonym: "HBA solvent" RELATED [ChEBI] -synonym: "hydrogen bond acceptor solvent" RELATED [ChEBI] -synonym: "protophilic solvent" EXACT IUPAC_NAME [IUPAC] +subset: 3:STAR +synonym: "HBA solvent" RELATED [chebi] +synonym: "hydrogen bond acceptor solvent" RELATED [chebi] +synonym: "protophilic solvent" EXACT IUPAC:NAME [IUPAC] +synonym: "protophilic solvent" RELATED IUPAC:NAME [iupac] is_a: CHEBI:39142 ! Bronsted base is_a: CHEBI:48354 ! polar solvent [Term] id: CHEBI:48360 name: amphiprotic solvent -def: "Self-ionizing solvent possessing both characteristics of Bronsted acids and bases." [] -subset: 3_STAR -synonym: "amphiprotic solvent" EXACT IUPAC_NAME [IUPAC] +def: "Self-ionizing solvent possessing both characteristics of Brønsted acids and bases." [] +subset: 3:STAR +synonym: "amphiprotic solvent" EXACT IUPAC:NAME [IUPAC] +synonym: "amphiprotic solvent" RELATED IUPAC:NAME [iupac] is_a: CHEBI:48356 ! protic solvent is_a: CHEBI:48359 ! protophilic solvent [Term] id: CHEBI:48539 name: alpha-adrenergic drug -def: "Any drug that acts on an alpha-adrenergic receptor." [] -subset: 3_STAR -synonym: "alpha-adrenergic drugs" RELATED [ChEBI] +def: "Any drug that acts on an α-adrenergic receptor." [] +subset: 3:STAR +synonym: "alpha-adrenergic drugs" RELATED [chebi] is_a: CHEBI:37962 ! adrenergic agent [Term] id: CHEBI:48540 name: beta-adrenergic drug -def: "Any of the drugs that act on beta-adrenergic receptors." [] -subset: 3_STAR -synonym: "beta-adrenergic drugs" RELATED [ChEBI] +def: "Any of the drugs that act on β-adrenergic receptors." [] +subset: 3:STAR +synonym: "beta-adrenergic drugs" RELATED [chebi] is_a: CHEBI:37962 ! adrenergic agent [Term] id: CHEBI:48560 name: dopaminergic agent def: "A drug used for its effects on dopamine receptors, on the life cycle of dopamine, or on the survival of dopaminergic neurons." [] -subset: 3_STAR -synonym: "dopamine agent" RELATED [ChEBI] -synonym: "dopamine agents" RELATED [ChEBI] -synonym: "dopamine drug" RELATED [ChEBI] -synonym: "dopamine drugs" RELATED [ChEBI] -synonym: "dopaminergic agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "dopamine agent" RELATED [chebi] +synonym: "dopamine agents" RELATED [chebi] +synonym: "dopamine drug" RELATED [chebi] +synonym: "dopamine drugs" RELATED [chebi] +synonym: "dopaminergic agents" RELATED [chebi] is_a: CHEBI:35942 ! neurotransmitter agent [Term] id: CHEBI:48578 name: radical scavenger def: "A role played by a substance that can react readily with, and thereby eliminate, radicals." [] -subset: 3_STAR -synonym: "free radical scavengers" RELATED [ChEBI] -synonym: "free-radical scavenger" RELATED [ChEBI] +subset: 3:STAR +synonym: "free radical scavengers" RELATED [chebi] +synonym: "free-radical scavenger" RELATED [chebi] is_a: CHEBI:22586 ! antioxidant [Term] id: CHEBI:48705 name: agonist def: "Substance which binds to cell receptors normally responding to naturally occurring substances and which produces a response of its own." [] -subset: 3_STAR -synonym: "agonist" EXACT IUPAC_NAME [IUPAC] -synonym: "agonista" RELATED [ChEBI] -synonym: "agoniste" RELATED [ChEBI] -synonym: "agonists" RELATED [ChEBI] +subset: 3:STAR +synonym: "agonist" EXACT IUPAC:NAME [IUPAC] +synonym: "agonist" RELATED IUPAC:NAME [iupac] +synonym: "agonista" RELATED [chebi] +synonym: "agoniste" RELATED [chebi] +synonym: "agonists" RELATED [chebi] is_a: CHEBI:52210 ! pharmacological role [Term] id: CHEBI:48706 name: antagonist def: "Substance that attaches to and blocks cell receptors that normally bind naturally occurring substances." [] -subset: 3_STAR -synonym: "antagonist" EXACT IUPAC_NAME [IUPAC] -synonym: "antagonista" RELATED [ChEBI] -synonym: "antagoniste" RELATED [ChEBI] -synonym: "antagonists" RELATED [ChEBI] +subset: 3:STAR +synonym: "antagonist" EXACT IUPAC:NAME [IUPAC] +synonym: "antagonist" RELATED IUPAC:NAME [iupac] +synonym: "antagonista" RELATED [chebi] +synonym: "antagoniste" RELATED [chebi] +synonym: "antagonists" RELATED [chebi] is_a: CHEBI:52210 ! pharmacological role [Term] id: CHEBI:48873 name: cholinergic antagonist def: "Any drug that binds to but does not activate cholinergic receptors, thereby blocking the actions of acetylcholine or cholinergic agonists." [] -subset: 3_STAR -synonym: "acetylcholine antagonists" RELATED [ChEBI] -synonym: "acetylcholine receptor antagonist" RELATED [IUPHAR] -synonym: "agent anticholinergique" RELATED [ChEBI] -synonym: "agente anticolinergico" RELATED [ChEBI] -synonym: "agentes anticolinergicos" RELATED [ChEBI] -synonym: "anticholinergic agents" RELATED [ChEBI] -synonym: "anticholinergics" RELATED [ChEBI] -synonym: "Anticholinergika" RELATED [ChEBI] -synonym: "Anticholinergikum" RELATED [ChEBI] -synonym: "anticholinergiques" RELATED [ChEBI] -synonym: "anticolinergicos" RELATED [ChEBI] -synonym: "cholinergic-blocking agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "acetylcholine antagonists" RELATED [chebi] +synonym: "acetylcholine receptor antagonist" RELATED [iuphar] +synonym: "agent anticholinergique" RELATED [chebi] +synonym: "agente anticolinergico" RELATED [chebi] +synonym: "agentes anticolinergicos" RELATED [chebi] +synonym: "anticholinergic agents" RELATED [chebi] +synonym: "anticholinergics" RELATED [chebi] +synonym: "Anticholinergika" RELATED [chebi] +synonym: "Anticholinergikum" RELATED [chebi] +synonym: "anticholinergiques" RELATED [chebi] +synonym: "anticolinergicos" RELATED [chebi] +synonym: "cholinergic-blocking agents" RELATED [chebi] is_a: CHEBI:38323 ! cholinergic drug [Term] id: CHEBI:49323 name: contraceptive drug def: "A chemical substance that prevents or reduces the probability of conception." [] -subset: 3_STAR -synonym: "contraceptive agent" RELATED [ChEBI] -synonym: "contraceptive drugs" RELATED [ChEBI] +subset: 3:STAR +synonym: "contraceptive agent" RELATED [chebi] +synonym: "contraceptive drugs" RELATED [chebi] is_a: CHEBI:50689 ! reproductive control drug [Term] @@ -10833,15 +11329,15 @@ id: CHEBI:49637 name: hydrogen atom alt_id: CHEBI:24634 alt_id: CHEBI:49636 -subset: 3_STAR -synonym: "1H" RELATED [IUPAC] -synonym: "H" RELATED [IUPAC] -synonym: "hidrogeno" RELATED [ChEBI] -synonym: "hydrogen" EXACT IUPAC_NAME [IUPAC] -synonym: "hydrogen" RELATED [ChEBI] -synonym: "hydrogene" RELATED [ChEBI] -synonym: "Wasserstoff" RELATED [ChEBI] -xref: WebElements:H +subset: 3:STAR +synonym: "1H" RELATED [iupac] +synonym: "H" RELATED [iupac] +synonym: "hidrogeno" RELATED [chebi] +synonym: "hydrogen" EXACT IUPAC:NAME [IUPAC] +synonym: "hydrogen" RELATED IUPAC:NAME [chebi, iupac] +synonym: "hydrogene" RELATED [chebi] +synonym: "Wasserstoff" RELATED [chebi] +xref: webelements:H {source="webelements"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:24835 ! inorganic molecular entity is_a: CHEBI:25585 ! nonmetal atom @@ -10852,173 +11348,178 @@ relationship: RO:0000087 CHEBI:33937 ! has role macronutrient id: CHEBI:50047 name: organic amino compound def: "A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by organyl groups." [] -subset: 3_STAR -synonym: "organic amino compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic amino compounds" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35352 ! organonitrogen compound -relationship: has_parent_hydride CHEBI:16134 ! ammonia relationship: RO:0000087 CHEBI:39142 ! has role Bronsted base +relationship: RO:0018040 CHEBI:16134 ! has parent hydride ammonia [Term] id: CHEBI:50112 name: sex hormone def: "Any hormone that is responsible for controlling sexual characteristics and reproductive function." [] -subset: 3_STAR -synonym: "Geschlechtshormon" RELATED [ChEBI] -synonym: "Geschlechtshormone" RELATED [ChEBI] -synonym: "hormone sexuelle" RELATED [ChEBI] -synonym: "hormones sexuelles" RELATED [ChEBI] -synonym: "sex hormones" RELATED [ChEBI] -synonym: "Sexualhormon" RELATED [ChEBI] -synonym: "Sexualhormone" RELATED [ChEBI] +subset: 3:STAR +synonym: "Geschlechtshormon" RELATED [chebi] +synonym: "Geschlechtshormone" RELATED [chebi] +synonym: "hormone sexuelle" RELATED [chebi] +synonym: "hormones sexuelles" RELATED [chebi] +synonym: "sex hormones" RELATED [chebi] +synonym: "Sexualhormon" RELATED [chebi] +synonym: "Sexualhormone" RELATED [chebi] is_a: CHEBI:24621 ! hormone [Term] id: CHEBI:50113 name: androgen def: "A sex hormone that stimulates or controls the development and maintenance of masculine characteristics in vertebrates by binding to androgen receptors." [] -subset: 3_STAR -synonym: "Androgen" EXACT [ChEBI] -synonym: "Androgene" RELATED [ChEBI] -synonym: "androgene" RELATED [ChEBI] -synonym: "androgenes" RELATED [ChEBI] -synonym: "androgeno" RELATED [ChEBI] -synonym: "androgenos" RELATED [ChEBI] -synonym: "androgens" RELATED [ChEBI] +subset: 3:STAR +synonym: "Androgen" RELATED [chebi] +synonym: "Androgene" RELATED [chebi] +synonym: "androgene" RELATED [chebi] +synonym: "androgenes" RELATED [chebi] +synonym: "androgeno" RELATED [chebi] +synonym: "androgenos" RELATED [chebi] +synonym: "androgens" RELATED [chebi] is_a: CHEBI:50112 ! sex hormone [Term] id: CHEBI:50160 name: steroid acid anion def: "Any anion formed by loss of a proton from a steroid acid." [] -subset: 3_STAR -synonym: "steroid acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "steroid acid anions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion -relationship: is_conjugate_base_of CHEBI:47891 ! steroid acid +relationship: RO:0018033 CHEBI:47891 ! is deprotonated form of steroid acid [Term] id: CHEBI:50188 name: provitamin def: "A substance that can be converted into a vitamin by animal tissues." [] -subset: 3_STAR -synonym: "provitamins" RELATED [ChEBI] -xref: Wikipedia:Provitamin +subset: 3:STAR +synonym: "provitamins" RELATED [chebi] +xref: wikipedia.en:Provitamin {source="wikipedia.en"} is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:50267 name: protective agent def: "Synthetic or natural substance which is given to prevent a disease or disorder or are used in the process of treating a disease or injury due to a poisonous agent." [] -subset: 3_STAR -synonym: "chemoprotectant" RELATED [ChEBI] -synonym: "chemoprotectants" RELATED [ChEBI] -synonym: "chemoprotective agent" RELATED [ChEBI] -synonym: "chemoprotective agents" RELATED [ChEBI] -synonym: "protective agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "chemoprotectant" RELATED [chebi] +synonym: "chemoprotectants" RELATED [chebi] +synonym: "chemoprotective agent" RELATED [chebi] +synonym: "chemoprotective agents" RELATED [chebi] +synonym: "protective agents" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:50297 name: canonical nucleotide residue -subset: 3_STAR -synonym: "canonical nucleotide residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical nucleotide residues" RELATED [chebi] is_a: CHEBI:50319 ! nucleotide residue [Term] id: CHEBI:50298 name: canonical deoxyribonucleotide residue -subset: 3_STAR -synonym: "canonical deoxyribonucleotide residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical deoxyribonucleotide residues" RELATED [chebi] is_a: CHEBI:50297 ! canonical nucleotide residue [Term] id: CHEBI:50299 name: canonical ribonucleotide residue -subset: 3_STAR -synonym: "canonical ribonucleotide residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical ribonucleotide residues" RELATED [chebi] is_a: CHEBI:50297 ! canonical nucleotide residue [Term] id: CHEBI:50312 name: onium compound -subset: 1_STAR +subset: 1:STAR +synonym: "onium compound" RELATED [chebi] +synonym: "onium compounds" EXACT IUPAC:NAME [IUPAC] +synonym: "onium compounds" RELATED IUPAC:NAME [chebi, iupac] is_a: CHEBI:37577 ! heteroatomic molecular entity [Term] id: CHEBI:50313 name: onium cation def: "Mononuclear cations derived by addition of a hydron to a mononuclear parent hydride of the pnictogen, chalcogen and halogen families." [] -subset: 3_STAR -synonym: "onium cations" EXACT IUPAC_NAME [IUPAC] -synonym: "onium cations" RELATED [ChEBI] -synonym: "onium ion" RELATED [ChEBI] -synonym: "onium ions" RELATED [ChEBI] +subset: 3:STAR +synonym: "onium cations" EXACT IUPAC:NAME [IUPAC] +synonym: "onium cations" RELATED IUPAC:NAME [chebi, iupac] +synonym: "onium ion" RELATED [chebi] +synonym: "onium ions" RELATED [chebi] is_a: CHEBI:50312 ! onium compound [Term] id: CHEBI:50319 name: nucleotide residue -subset: 3_STAR -synonym: "nucleotide residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "nucleotide residues" RELATED [chebi] is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:50320 name: nucleoside residue -subset: 3_STAR -synonym: "nucleoside residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "nucleoside residues" RELATED [chebi] is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:50325 name: proteinogenic amino-acid side-chain group def: "A univalent organyl group obtained by cleaving the bond from C-2 to the side chain of a proteinogenic amino-acid." [] -subset: 3_STAR -synonym: "canonical amino-acid side-chain" RELATED [ChEBI] -synonym: "canonical amino-acid side-chains" RELATED [ChEBI] -synonym: "proteinogenic amino-acid side-chain" RELATED [ChEBI] -synonym: "proteinogenic amino-acid side-chain groups" RELATED [ChEBI] -synonym: "proteinogenic amino-acid side-chains" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical amino-acid side-chain" RELATED [chebi] +synonym: "canonical amino-acid side-chains" RELATED [chebi] +synonym: "proteinogenic amino-acid side-chain" RELATED [chebi] +synonym: "proteinogenic amino-acid side-chain groups" RELATED [chebi] +synonym: "proteinogenic amino-acid side-chains" RELATED [chebi] is_a: CHEBI:33249 ! organyl group [Term] id: CHEBI:50329 name: 2-carboxyethyl group -subset: 3_STAR -synonym: "2-carboxyethyl" EXACT IUPAC_NAME [IUPAC] -synonym: "glutamic acid side-chain" RELATED [ChEBI] +subset: 3:STAR +synonym: "2-carboxyethyl" EXACT IUPAC:NAME [IUPAC] +synonym: "2-carboxyethyl" RELATED IUPAC:NAME [iupac] +synonym: "glutamic acid side-chain" RELATED [chebi] is_a: CHEBI:50325 ! proteinogenic amino-acid side-chain group [Term] id: CHEBI:50336 name: 4-hydroxybenzyl group -subset: 3_STAR -synonym: "4-hydroxybenzyl" EXACT IUPAC_NAME [IUPAC] -synonym: "tyrosine side-chain" RELATED [ChEBI] +subset: 3:STAR +synonym: "4-hydroxybenzyl" EXACT IUPAC:NAME [IUPAC] +synonym: "4-hydroxybenzyl" RELATED IUPAC:NAME [iupac] +synonym: "tyrosine side-chain" RELATED [chebi] is_a: CHEBI:50325 ! proteinogenic amino-acid side-chain group [Term] id: CHEBI:50402 name: androstanoid def: "Any steroid based on an androstane skeleton and its derivatives." [] -subset: 3_STAR -synonym: "androstanoids" RELATED [ChEBI] +subset: 3:STAR +synonym: "androstanoids" RELATED [chebi] is_a: CHEBI:35341 ! steroid -relationship: has_parent_hydride CHEBI:35509 ! androstane +relationship: RO:0018040 CHEBI:35509 ! has parent hydride androstane [Term] id: CHEBI:50513 name: mydriatic agent def: "Agent that dilates the pupil. Used in eye diseases and to facilitate eye examination. It may be either a sympathomimetic or parasympatholytic. The latter cause cycloplegia or paralysis of accommodation at high doses and may precipitate glaucoma." [] -subset: 3_STAR -synonym: "mydriatics" RELATED [ChEBI] +subset: 3:STAR +synonym: "mydriatics" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:50514 name: vasoconstrictor agent def: "Drug used to cause constriction of the blood vessels." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:35554 ! cardiovascular drug [Term] @@ -11026,71 +11527,71 @@ id: CHEBI:50646 name: bone density conservation agent alt_id: CHEBI:72497 def: "An agent that inhibits bone resorption and/or favor bone mineralization and bone regeneration. Used to heal bone fractures and to treat bone diseases such as osteopenia and osteoporosis." [] -subset: 3_STAR -synonym: "anti-osteopenia agent" RELATED [ChEBI] -synonym: "anti-osteopenia agents" RELATED [ChEBI] -synonym: "anti-osteopenia drug" RELATED [ChEBI] -synonym: "anti-osteopenia drugs" RELATED [ChEBI] -synonym: "anti-osteoporosis agent" RELATED [ChEBI] -synonym: "anti-osteoporosis agents" RELATED [ChEBI] -synonym: "anti-osteoporosis drug" RELATED [ChEBI] -synonym: "anti-osteoporosis drugs" RELATED [ChEBI] -synonym: "anti-osteoporotic" RELATED [ChEBI] -synonym: "anti-osteoporotic agent" RELATED [ChEBI] -synonym: "anti-osteoporotic agents" RELATED [ChEBI] -synonym: "anti-osteoporotic drug" RELATED [ChEBI] -synonym: "anti-osteoporotic drugs" RELATED [ChEBI] -synonym: "anti-osteoporotics" RELATED [ChEBI] -synonym: "antiosteoporotic" RELATED [ChEBI] -synonym: "antiosteoporotics" RELATED [ChEBI] -synonym: "bone density conservation agents" RELATED [ChEBI] -synonym: "bone density conservation drug" RELATED [ChEBI] -synonym: "bone density conservation drugs" RELATED [ChEBI] -xref: Wikipedia:Osteoporosis +subset: 3:STAR +synonym: "anti-osteopenia agent" RELATED [chebi] +synonym: "anti-osteopenia agents" RELATED [chebi] +synonym: "anti-osteopenia drug" RELATED [chebi] +synonym: "anti-osteopenia drugs" RELATED [chebi] +synonym: "anti-osteoporosis agent" RELATED [chebi] +synonym: "anti-osteoporosis agents" RELATED [chebi] +synonym: "anti-osteoporosis drug" RELATED [chebi] +synonym: "anti-osteoporosis drugs" RELATED [chebi] +synonym: "anti-osteoporotic" RELATED [chebi] +synonym: "anti-osteoporotic agent" RELATED [chebi] +synonym: "anti-osteoporotic agents" RELATED [chebi] +synonym: "anti-osteoporotic drug" RELATED [chebi] +synonym: "anti-osteoporotic drugs" RELATED [chebi] +synonym: "anti-osteoporotics" RELATED [chebi] +synonym: "antiosteoporotic" RELATED [chebi] +synonym: "antiosteoporotics" RELATED [chebi] +synonym: "bone density conservation agents" RELATED [chebi] +synonym: "bone density conservation drug" RELATED [chebi] +synonym: "bone density conservation drugs" RELATED [chebi] +xref: wikipedia.en:Osteoporosis {source="wikipedia.en"} is_a: CHEBI:23888 ! drug [Term] id: CHEBI:50689 name: reproductive control drug def: "A substance used either in the prevention or facilitation of pregnancy." [] -subset: 3_STAR -synonym: "reproductive control agent" RELATED [ChEBI] -synonym: "reproductive control drugs" RELATED [ChEBI] +subset: 3:STAR +synonym: "reproductive control agent" RELATED [chebi] +synonym: "reproductive control drugs" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:50733 name: nutraceutical def: "A product in capsule, tablet or liquid form that provide essential nutrients, such as a vitamin, an essential mineral, a protein, an herb, or similar nutritional substance." [] -subset: 3_STAR -synonym: "Dietary Supplement" RELATED [ChEBI] -synonym: "Food Supplementation" RELATED [ChEBI] -synonym: "Nutritional supplement" RELATED [ChEBI] +subset: 3:STAR +synonym: "Dietary Supplement" RELATED [chebi] +synonym: "Food Supplementation" RELATED [chebi] +synonym: "Nutritional supplement" RELATED [chebi] is_a: CHEBI:23888 ! drug [Term] id: CHEBI:50745 name: progestogen def: "A compound that interacts with progesterone receptors in target tissues to bring about effects similar to those of progesterone." [] -subset: 3_STAR -synonym: "gestagen" RELATED [ChEBI] -synonym: "gestagens" RELATED [ChEBI] -synonym: "progestagen" RELATED [ChEBI] -synonym: "progestagens" RELATED [ChEBI] -synonym: "progestogens" RELATED [ChEBI] +subset: 3:STAR +synonym: "gestagen" RELATED [chebi] +synonym: "gestagens" RELATED [chebi] +synonym: "progestagen" RELATED [chebi] +synonym: "progestagens" RELATED [chebi] +synonym: "progestogens" RELATED [chebi] is_a: CHEBI:50112 ! sex hormone [Term] id: CHEBI:50846 name: immunomodulator def: "Biologically active substance whose activity affects or plays a role in the functioning of the immune system." [] -subset: 3_STAR -synonym: "Biomodulator" RELATED [ChEBI] -synonym: "Immune factor" RELATED [ChEBI] -synonym: "Immunologic factor" RELATED [ChEBI] -synonym: "Immunological factor" RELATED [ChEBI] -synonym: "immunomodulators" RELATED [ChEBI] -xref: Wikipedia:Immunotherapy +subset: 3:STAR +synonym: "Biomodulator" RELATED [chebi] +synonym: "Immune factor" RELATED [chebi] +synonym: "Immunologic factor" RELATED [chebi] +synonym: "Immunological factor" RELATED [chebi] +synonym: "immunomodulators" RELATED [chebi] +xref: wikipedia.en:Immunotherapy {source="wikipedia.en"} is_a: CHEBI:23888 ! drug is_a: CHEBI:24432 ! biological role @@ -11098,13 +11599,13 @@ is_a: CHEBI:24432 ! biological role id: CHEBI:50847 name: immunological adjuvant def: "A substance that augments, stimulates, activates, potentiates, or modulates the immune response at either the cellular or humoral level. A classical agent (Freund's adjuvant, BCG, Corynebacterium parvum, et al.) contains bacterial antigens. It could also be endogenous (e.g., histamine, interferon, transfer factor, tuftsin, interleukin-1). Its mode of action is either non-specific, resulting in increased immune responsiveness to a wide variety of antigens, or antigen-specific, i.e., affecting a restricted type of immune response to a narrow group of antigens. The therapeutic efficacy is related to its antigen-specific immunoadjuvanticity." [] -subset: 3_STAR -synonym: "Immunoactivator" RELATED [ChEBI] -synonym: "Immunoadjuvant" RELATED [ChEBI] -synonym: "Immunologic adjuvant" RELATED [ChEBI] -synonym: "Immunopotentiator" RELATED [ChEBI] -synonym: "Immunostimulant" RELATED [ChEBI] -xref: Wikipedia:Immunologic_adjuvant +subset: 3:STAR +synonym: "Immunoactivator" RELATED [chebi] +synonym: "Immunoadjuvant" RELATED [chebi] +synonym: "Immunologic adjuvant" RELATED [chebi] +synonym: "Immunopotentiator" RELATED [chebi] +synonym: "Immunostimulant" RELATED [chebi] +xref: wikipedia.en:Immunologic_adjuvant {source="wikipedia.en"} is_a: CHEBI:50846 ! immunomodulator is_a: CHEBI:60809 ! adjuvant @@ -11112,10 +11613,10 @@ is_a: CHEBI:60809 ! adjuvant id: CHEBI:50858 name: corticosteroid def: "A natural or synthetic analogue of the hormones secreted by the adrenal gland." [] -subset: 3_STAR -synonym: "corticoides" RELATED [ChEBI] -synonym: "corticosteroides" RELATED [ChEBI] -synonym: "corticosteroids" RELATED [ChEBI] +subset: 3:STAR +synonym: "corticoides" RELATED [chebi] +synonym: "corticosteroides" RELATED [chebi] +synonym: "corticosteroids" RELATED [chebi] is_a: CHEBI:35341 ! steroid [Term] @@ -11124,10 +11625,10 @@ name: organic molecular entity alt_id: CHEBI:25700 alt_id: CHEBI:33244 def: "Any molecular entity that contains carbon." [] -subset: 3_STAR -synonym: "organic compounds" RELATED [ChEBI] -synonym: "organic entity" RELATED [ChEBI] -synonym: "organic molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic compounds" RELATED [chebi] +synonym: "organic entity" RELATED [chebi] +synonym: "organic molecular entities" RELATED [chebi] is_a: CHEBI:33582 ! carbon group molecular entity relationship: has_part CHEBI:27594 ! carbon atom @@ -11135,48 +11636,48 @@ relationship: has_part CHEBI:27594 ! carbon atom id: CHEBI:50903 name: carcinogenic agent def: "A role played by a chemical compound which is known to induce a process of carcinogenesis by corrupting normal cellular pathways, leading to the acquistion of tumoral capabilities." [] -subset: 3_STAR -synonym: "agente carcinogeno" RELATED [ChEBI] -synonym: "cancerigene" RELATED [ChEBI] -synonym: "cancerogene" RELATED [ChEBI] -synonym: "carcinogen" RELATED [ChEBI] -synonym: "carcinogene" RELATED [ChEBI] -synonym: "carcinogenic agents" RELATED [ChEBI] -synonym: "carcinogeno" RELATED [ChEBI] -synonym: "carcinogens" RELATED [ChEBI] +subset: 3:STAR +synonym: "agente carcinogeno" RELATED [chebi] +synonym: "cancerigene" RELATED [chebi] +synonym: "cancerogene" RELATED [chebi] +synonym: "carcinogen" RELATED [chebi] +synonym: "carcinogene" RELATED [chebi] +synonym: "carcinogenic agents" RELATED [chebi] +synonym: "carcinogeno" RELATED [chebi] +synonym: "carcinogens" RELATED [chebi] is_a: CHEBI:52209 ! aetiopathogenetic role [Term] id: CHEBI:50904 name: allergen def: "A chemical compound, or part thereof, which causes the onset of an allergic reaction by interacting with any of the molecular pathways involved in an allergy." [] -subset: 3_STAR -synonym: "alergeno" RELATED [ChEBI] -synonym: "allergene" RELATED [ChEBI] -synonym: "allergenic agent" RELATED [ChEBI] -xref: Wikipedia:Allergen +subset: 3:STAR +synonym: "alergeno" RELATED [chebi] +synonym: "allergene" RELATED [chebi] +synonym: "allergenic agent" RELATED [chebi] +xref: wikipedia.en:Allergen {source="wikipedia.en"} is_a: CHEBI:52209 ! aetiopathogenetic role [Term] id: CHEBI:50906 name: role def: "A role is particular behaviour which a material entity may exhibit." [] -subset: 3_STAR +subset: 3:STAR [Term] id: CHEBI:50910 name: neurotoxin alt_id: CHEBI:50911 def: "A poison that interferes with the functions of the nervous system." [] -subset: 3_STAR -synonym: "agente neurotoxico" RELATED [ChEBI] -synonym: "nerve poison" RELATED [ChEBI] -synonym: "nerve poisons" RELATED [ChEBI] -synonym: "neurotoxic agent" RELATED [ChEBI] -synonym: "neurotoxic agents" RELATED [ChEBI] -synonym: "neurotoxicant" RELATED [ChEBI] -synonym: "neurotoxins" RELATED [ChEBI] -xref: Wikipedia:Neurotoxin +subset: 3:STAR +synonym: "agente neurotoxico" RELATED [chebi] +synonym: "nerve poison" RELATED [chebi] +synonym: "nerve poisons" RELATED [chebi] +synonym: "neurotoxic agent" RELATED [chebi] +synonym: "neurotoxic agents" RELATED [chebi] +synonym: "neurotoxicant" RELATED [chebi] +synonym: "neurotoxins" RELATED [chebi] +xref: wikipedia.en:Neurotoxin {source="wikipedia.en"} is_a: CHEBI:52209 ! aetiopathogenetic role is_a: CHEBI:64909 ! poison @@ -11184,24 +11685,24 @@ is_a: CHEBI:64909 ! poison id: CHEBI:50967 name: non-covalently-bound molecular entity def: "Systems consisting of two or more molecular entities held together by non-covalent interactions." [] -subset: 3_STAR -synonym: "non-covalently-bound molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "non-covalently-bound molecular entities" RELATED [chebi] is_a: CHEBI:36357 ! polyatomic entity [Term] id: CHEBI:50994 name: primary amino compound def: "A compound formally derived from ammonia by replacing one hydrogen atom by an organyl group." [] -subset: 3_STAR -synonym: "primary amino compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "primary amino compounds" RELATED [chebi] is_a: CHEBI:50047 ! organic amino compound -relationship: is_conjugate_base_of CHEBI:65296 ! primary ammonium ion +relationship: RO:0018033 CHEBI:65296 ! is deprotonated form of primary ammonium ion [Term] id: CHEBI:51060 name: hormone agonist def: "A chemical substance which binds to specific hormone receptors activating the function of the endocrine glands, the biosynthesis of their secreted hormones, or the action of hormones upon their specific sites." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:48705 ! agonist is_a: CHEBI:51061 ! hormone receptor modulator @@ -11209,15 +11710,15 @@ is_a: CHEBI:51061 ! hormone receptor modulator id: CHEBI:51061 name: hormone receptor modulator def: "A drug that modulates the function of the endocrine glands, the biosynthesis of their secreted hormones, or the action of hormones upon their specific sites." [] -subset: 3_STAR -synonym: "hormone receptor modulators" RELATED [ChEBI] +subset: 3:STAR +synonym: "hormone receptor modulators" RELATED [chebi] is_a: CHEBI:90710 ! receptor modulator [Term] id: CHEBI:51086 name: chemical role def: "A role played by the molecular entity or part thereof within a chemical context." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:50906 ! role [Term] @@ -11225,11 +11726,11 @@ id: CHEBI:51143 name: nitrogen molecular entity alt_id: CHEBI:25556 alt_id: CHEBI:7594 -subset: 3_STAR -synonym: "nitrogen compounds" RELATED [ChEBI] -synonym: "nitrogen molecular entities" RELATED [ChEBI] -synonym: "Nitrogenous compounds" RELATED [KEGG_COMPOUND] -xref: KEGG:C06061 +subset: 3:STAR +synonym: "nitrogen compounds" RELATED [chebi] +synonym: "nitrogen molecular entities" RELATED [chebi] +synonym: "Nitrogenous compounds" RELATED [kegg.compound] +xref: kegg.compound:C06061 {source="kegg.compound"} is_a: CHEBI:33302 ! pnictogen molecular entity relationship: has_part CHEBI:25555 ! nitrogen atom @@ -11237,53 +11738,54 @@ relationship: has_part CHEBI:25555 ! nitrogen atom id: CHEBI:51151 name: dipolar compound def: "An organic molecule that is electrically neutral carrying a positive and a negative charge in one of its major canonical descriptions. In most dipolar compounds the charges are delocalized; however the term is also applied to species where this is not the case." [] -subset: 3_STAR -synonym: "dipolar compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "dipolar compounds" RELATED [chebi] is_a: CHEBI:72695 ! organic molecule [Term] id: CHEBI:51422 name: organodiyl group def: "Any organic substituent group, regardless of functional type, having two free valences at carbon atom(s)." [] -subset: 3_STAR -synonym: "organodiyl groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "organodiyl groups" RELATED [chebi] is_a: CHEBI:51446 ! organic divalent group [Term] id: CHEBI:51446 name: organic divalent group -subset: 1_STAR +subset: 1:STAR is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:51447 name: organic univalent group -subset: 1_STAR +subset: 1:STAR +synonym: "organic monovalent group" RELATED [chebi] is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:51689 name: enone -def: "An alpha,beta-unsaturated ketone of general formula R(1)R(2)C=CR(3)-C(=O)R(4) (R(4) =/= H) in which the C=O function is conjugated to a C=C double bond at the alpha,beta position." [] -subset: 3_STAR -synonym: "enones" RELATED [ChEBI] -xref: Wikipedia:Enone +def: "An α,β-unsaturated ketone of general formula R1R2C=CR3‒C(=O)R4 (R4 ≠ H) in which the C=O function is conjugated to a C=C double bond at the α,β position." [] +subset: 3:STAR +synonym: "enones" RELATED [chebi] +xref: wikipedia.en:Enone {source="wikipedia.en"} is_a: CHEBI:51721 ! alpha,beta-unsaturated ketone is_a: CHEBI:78840 ! olefinic compound [Term] id: CHEBI:51721 name: alpha,beta-unsaturated ketone -def: "A ketone of general formula R(1)R(2)C=CR(3)-C(=O)R(4) (R(4) =/= H) or R(1)C#C-C(=O)R(2) (R(2) =/= H) in which the ketonic C=O function is conjugated to an unsaturated C-C bond at the alpha,beta position." [] -subset: 3_STAR -synonym: "alpha,beta-unsaturated ketones" RELATED [ChEBI] +def: "A ketone of general formula R1R2C=CR3‒C(=O)R4 (R4 ≠ H) or R1C≡C‒C(=O)R2 (R2 ≠ H) in which the ketonic C=O function is conjugated to an unsaturated C-C bond at the α,β position." [] +subset: 3:STAR +synonym: "alpha,beta-unsaturated ketones" RELATED [chebi] is_a: CHEBI:17087 ! ketone [Term] id: CHEBI:51958 name: organic polycyclic compound -subset: 3_STAR -synonym: "organic polycyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic polycyclic compounds" RELATED [chebi] is_a: CHEBI:33635 ! polycyclic compound is_a: CHEBI:33832 ! organic cyclic compound @@ -11291,35 +11793,36 @@ is_a: CHEBI:33832 ! organic cyclic compound id: CHEBI:52206 name: biochemical role def: "A biological role played by the molecular entity or part thereof within a biochemical context." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:52208 name: biophysical role -subset: 1_STAR +subset: 1:STAR is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:52209 name: aetiopathogenetic role def: "A role played by the molecular entity or part thereof which causes the development of a pathological process." [] -subset: 3_STAR -synonym: "etiopathogenetic agent" RELATED [ChEBI] -synonym: "etiopathogenetic role" RELATED [ChEBI] +subset: 3:STAR +synonym: "etiopathogenetic agent" RELATED [chebi] +synonym: "etiopathogenetic role" RELATED [chebi] is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:52210 name: pharmacological role def: "A biological role which describes how a drug interacts within a biological system and how the interactions affect its medicinal properties." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:52211 name: physiological role -subset: 1_STAR +def: "A biological role relating to the normal mechanisms and their interactions within a living system." [] +subset: 1:STAR is_a: CHEBI:24432 ! biological role [Term] @@ -11328,40 +11831,40 @@ name: pharmaceutical alt_id: CHEBI:33293 alt_id: CHEBI:33294 def: "Any substance introduced into a living organism with therapeutic or diagnostic purpose." [] -subset: 3_STAR -synonym: "farmaco" RELATED [ChEBI] -synonym: "medicament" RELATED [ChEBI] -synonym: "pharmaceuticals" RELATED [ChEBI] +subset: 3:STAR +synonym: "farmaco" RELATED [chebi] +synonym: "medicament" RELATED [chebi] +synonym: "pharmaceuticals" RELATED [chebi] is_a: CHEBI:33232 ! application [Term] id: CHEBI:52254 name: apatite -def: "A phosphate mineral with the general formula Ca5(PO4)3X where X = OH, F or Cl." [] -subset: 3_STAR -synonym: "hydroxyapatite" RELATED [ChEBI] -xref: HMDB:HMDB0033610 +def: "A phosphate mineral with the general formula Ca5(PO4)3X where X = OH, F or Cl." [] +subset: 3:STAR +synonym: "hydroxyapatite" RELATED [chebi] +xref: hmdb:HMDB0033610 {source="hmdb"} is_a: CHEBI:46723 ! phosphate mineral [Term] id: CHEBI:52255 name: hydroxylapatite -def: "A phosphate mineral with the formula Ca5(PO4)3(OH)." [] -subset: 3_STAR +def: "A phosphate mineral with the formula Ca5(PO4)3(OH)." [] +subset: 3:STAR is_a: CHEBI:52254 ! apatite [Term] id: CHEBI:5254 name: galactolipid def: "A glycolipid and which the glyco component is specified as galactosyl." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:33563 ! glycolipid [Term] id: CHEBI:52625 name: inorganic hydroxy compound -subset: 3_STAR -synonym: "inorganic hydroxides" RELATED [ChEBI] +subset: 3:STAR +synonym: "inorganic hydroxides" RELATED [chebi] is_a: CHEBI:24651 ! hydroxides is_a: CHEBI:24835 ! inorganic molecular entity @@ -11369,480 +11872,490 @@ is_a: CHEBI:24835 ! inorganic molecular entity id: CHEBI:52845 name: cyclic organic group def: "An organic group that consists of a closed ring. It may be a substituent or a skeleton." [] -subset: 3_STAR -synonym: "cyclic organic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "cyclic organic groups" RELATED [chebi] is_a: CHEBI:33247 ! organic group [Term] id: CHEBI:53000 name: epitope def: "The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds." [] -subset: 3_STAR -synonym: "antigenic determinant" RELATED [ChEBI] -synonym: "epitope function" RELATED [ChEBI] -synonym: "epitope role" RELATED [ChEBI] +subset: 3:STAR +synonym: "antigenic determinant" RELATED [chebi] +synonym: "epitope function" RELATED [chebi] +synonym: "epitope role" RELATED [chebi] is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:53309 name: polyanionic macromolecule def: "A polymer carrying multiple negative charges." [] -subset: 3_STAR -synonym: "polyanion" RELATED [ChEBI] -synonym: "polyanions" RELATED [SUBMITTER] +subset: 3:STAR +synonym: "polyanion" RELATED [chebi] +synonym: "polyanions" RELATED [submitter] is_a: CHEBI:53368 ! ionic macromolecule [Term] id: CHEBI:53368 name: ionic macromolecule def: "A macromolecule containing ionic groups." [] -subset: 3_STAR -synonym: "ionic polymer" RELATED [ChEBI] -synonym: "polyionic macromolecule" RELATED [ChEBI] +subset: 3:STAR +synonym: "ionic polymer" RELATED [chebi] +synonym: "polyionic macromolecule" RELATED [chebi] is_a: CHEBI:33839 ! macromolecule [Term] id: CHEBI:5391 name: glucagon def: "A 29-amino acid peptide hormone consisting of His, Ser, Gln, Gly, Thr, Phe, Thr, Ser, Asp, Tyr, Ser, Lys, Tyr, Leu, Asp, Ser, Arg, Arg, Ala, Gln, Asp, Phe, Val, Gln, Trp, Leu, Met, Asn and Thr residues joined in sequence." [] -subset: 3_STAR -synonym: "Glucagon" EXACT [KEGG_COMPOUND] -synonym: "glucagon" RELATED INN [ChemIDplus] -synonym: "Glucagone" RELATED [ChemIDplus] -synonym: "glucagonum" RELATED INN [ChemIDplus] -synonym: "His-Ser-Gln-Gly-Thr-Phe-Thr-Ser-Asp-Tyr-Ser-Lys-Tyr-Leu-Asp-Ser-Arg-Arg-Ala-Gln-Asp-Phe-Val-Gln-Trp-Leu-Met-Asn-Thr" RELATED [ChEBI] -synonym: "His-ser-glu(nh2)-gly-thr-phe-thr-ser-asp-tyr-ser-lys-tyr-leu-asp-ser-arg-arg-ala-glu(NH2)-asp-phe-val-glu(NH2)-trp-leu-met-asp(NH2)-thr" RELATED [ChemIDplus] -synonym: "HSQGTFTSDYSKYLDSRRAQDFVQWLMNT" RELATED [ChEBI] -synonym: "L-histidyl-L-seryl-L-glutaminylglycyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-alpha-aspartyl-L-tyrosyl-L-seryl-L-lysyl-L-tyrosyl-L-leucyl-L-alpha-aspartyl-L-seryl-L-arginyl-L-arginyl-L-alanyl-L-glutaminyl-L-alpha-aspartyl-L-phenylalanyl-L-valyl-L-glutaminyl-L-tryptophyl-L-leucyl-L-methionyl-L-asparaginyl-L-threonine" EXACT IUPAC_NAME [IUPAC] -xref: CAS:16941-32-5 {source="ChemIDplus"} -xref: CAS:9007-92-5 {source="ChemIDplus", source="KEGG COMPOUND"} -xref: Drug_Central:2994 {source="DrugCentral"} -xref: DrugBank:DB00040 -xref: KEGG:C01501 -xref: KEGG:D00116 -xref: PMID:21940356 {source="Europe PMC"} -xref: PMID:22014161 {source="Europe PMC"} -xref: PMID:22154917 {source="Europe PMC"} -xref: PMID:22166985 {source="Europe PMC"} -xref: PMID:22167521 {source="Europe PMC"} -xref: PMID:22214853 {source="Europe PMC"} -xref: PMID:22227186 {source="Europe PMC"} -xref: PMID:22286080 {source="Europe PMC"} -xref: PMID:22294753 {source="Europe PMC"} -xref: PMID:22318544 {source="Europe PMC"} -xref: PMID:22334714 {source="Europe PMC"} -xref: PMID:22399501 {source="Europe PMC"} -xref: PMID:22438981 {source="Europe PMC"} -xref: PMID:22454291 {source="Europe PMC"} -xref: Reaxys:13191924 {source="Reaxys"} -xref: Wikipedia:Glucagon +subset: 3:STAR +synonym: "Glucagon" RELATED [kegg.compound] +synonym: "glucagon" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Glucagone" RELATED [chemidplus] +synonym: "glucagonum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "His-Ser-Gln-Gly-Thr-Phe-Thr-Ser-Asp-Tyr-Ser-Lys-Tyr-Leu-Asp-Ser-Arg-Arg-Ala-Gln-Asp-Phe-Val-Gln-Trp-Leu-Met-Asn-Thr" RELATED [chebi] +synonym: "His-ser-glu(nh2)-gly-thr-phe-thr-ser-asp-tyr-ser-lys-tyr-leu-asp-ser-arg-arg-ala-glu(NH2)-asp-phe-val-glu(NH2)-trp-leu-met-asp(NH2)-thr" RELATED [chemidplus] +synonym: "HSQGTFTSDYSKYLDSRRAQDFVQWLMNT" RELATED [chebi] +synonym: "L-histidyl-L-seryl-L-glutaminylglycyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-alpha-aspartyl-L-tyrosyl-L-seryl-L-lysyl-L-tyrosyl-L-leucyl-L-alpha-aspartyl-L-seryl-L-arginyl-L-arginyl-L-alanyl-L-glutaminyl-L-alpha-aspartyl-L-phenylalanyl-L-valyl-L-glutaminyl-L-tryptophyl-L-leucyl-L-methionyl-L-asparaginyl-L-threonine" EXACT IUPAC:NAME [IUPAC] +synonym: "L-histidyl-L-seryl-L-glutaminylglycyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-alpha-aspartyl-L-tyrosyl-L-seryl-L-lysyl-L-tyrosyl-L-leucyl-L-alpha-aspartyl-L-seryl-L-arginyl-L-arginyl-L-alanyl-L-glutaminyl-L-alpha-aspartyl-L-phenylalanyl-L-valyl-L-glutaminyl-L-tryptophyl-L-leucyl-L-methionyl-L-asparaginyl-L-threonine" RELATED IUPAC:NAME [iupac] +xref: cas:16941-32-5 {source="cas"} +xref: cas:9007-92-5 {source="cas"} +xref: drugbank:DB00040 {source="drugbank"} +xref: drugcentral:2994 {source="drugcentral"} +xref: kegg.compound:C01501 {source="kegg.compound"} +xref: kegg.drug:D00116 {source="kegg.drug"} +xref: pubmed:21940356 {source="pubmed"} +xref: pubmed:22014161 {source="pubmed"} +xref: pubmed:22154917 {source="pubmed"} +xref: pubmed:22166985 {source="pubmed"} +xref: pubmed:22167521 {source="pubmed"} +xref: pubmed:22214853 {source="pubmed"} +xref: pubmed:22227186 {source="pubmed"} +xref: pubmed:22286080 {source="pubmed"} +xref: pubmed:22294753 {source="pubmed"} +xref: pubmed:22318544 {source="pubmed"} +xref: pubmed:22334714 {source="pubmed"} +xref: pubmed:22399501 {source="pubmed"} +xref: pubmed:22438981 {source="pubmed"} +xref: pubmed:22454291 {source="pubmed"} +xref: reaxys:13191924 {source="reaxys"} +xref: wikipedia.en:Glucagon {source="wikipedia.en"} is_a: CHEBI:25905 ! peptide hormone [Term] id: CHEBI:5686 name: heterocyclic compound def: "A cyclic compound having as ring members atoms of at least two different elements." [] -subset: 3_STAR -synonym: "compuesto heterociclico" RELATED [IUPAC] -synonym: "compuestos heterociclicos" RELATED [IUPAC] -synonym: "heterocycle" RELATED [ChEBI] -synonym: "Heterocyclic compound" EXACT [KEGG_COMPOUND] -synonym: "heterocyclic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "compuesto heterociclico" RELATED [iupac] +synonym: "compuestos heterociclicos" RELATED [iupac] +synonym: "heterocycle" RELATED [chebi] +synonym: "Heterocyclic compound" RELATED [kegg.compound] +synonym: "heterocyclic compounds" RELATED [chebi] is_a: CHEBI:33595 ! cyclic compound [Term] id: CHEBI:57299 name: ATP(3-) def: "A ribonucleoside triphosphate oxoanion that is the trianion of adenosine 5'-triphosphate arising from deprotonation of three of the four free triphosphate OH groups." [] -subset: 3_STAR -xref: Beilstein:9535056 {source="Beilstein"} +subset: 3:STAR +xref: beilstein:9535056 {source="beilstein"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:59724 ! ribonucleoside triphosphate oxoanion -relationship: is_conjugate_acid_of CHEBI:30616 ! ATP(4-) -relationship: is_conjugate_base_of CHEBI:15422 ! ATP -relationship: is_conjugate_base_of CHEBI:237958 ! ({[(2R,3S,4R,5R)-3,4-dihydroxy-5-(9H-purin-9-yl)oxolan-2-yl]methyl phosphonato}oxy)(phosphonatooxy)phosphinate relationship: RO:0000087 CHEBI:23357 ! has role cofactor relationship: RO:0000087 CHEBI:77746 ! has role human metabolite relationship: RO:0000087 CHEBI:78675 ! has role fundamental metabolite +relationship: RO:0018033 CHEBI:15422 ! is deprotonated form of ATP +relationship: RO:0018033 CHEBI:237958 ! is deprotonated form of ({[(2R,3S,4R,5R)-3,4-dihydroxy-5-(9H-purin-9-yl)oxolan-2-yl]methyl phosphonato}oxy)(phosphonatooxy)phosphinate +relationship: RO:0018034 CHEBI:30616 ! is protonated form of ATP(4-) [Term] id: CHEBI:57652 name: chondroitin D-glucuronate anion -def: "Anionic form of chondroitin D-glucuronate arising from deprotonation of the carboxylic acid groups of the repeating units; major species at pH 7.3." [] -subset: 3_STAR -synonym: "chondroitin D-glucuronate" RELATED [UniProt] -synonym: "chondroitin D-glucuronate polyanion" RELATED [ChEBI] +def: "Anionic form of chondroitin D-glucuronate arising from deprotonation of the carboxylic acid groups of the repeating units; major species at pH 7.3." [] +subset: 3:STAR +synonym: "chondroitin D-glucuronate" RELATED [uniprot_ft] +synonym: "chondroitin D-glucuronate polyanion" RELATED [chebi] is_a: CHEBI:61469 ! polyanionic polymer -relationship: is_conjugate_base_of CHEBI:16137 ! chondroitin D-glucuronate +relationship: RO:0018033 CHEBI:16137 ! is deprotonated form of chondroitin D-glucuronate [Term] id: CHEBI:57852 name: prephenate(2-) def: "A dicarboxylic acid dianion that is the conjugate base of prephenic acid; major species at pH 7.3." [] -subset: 3_STAR -synonym: "1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" EXACT IUPAC_NAME [IUPAC] -synonym: "prephenate" RELATED [ChEBI] -synonym: "prephenate dianion" RELATED [ChEBI] -xref: Beilstein:5288208 {source="Beilstein"} +subset: 3:STAR +synonym: "1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" EXACT IUPAC:NAME [IUPAC] +synonym: "1-(2-carboxylato-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylate" RELATED IUPAC:NAME [iupac] +synonym: "prephenate" RELATED [chebi] +synonym: "prephenate dianion" RELATED [chebi] +xref: beilstein:5288208 {source="beilstein"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:28965 ! dicarboxylic acid dianion -relationship: is_conjugate_base_of CHEBI:16666 ! prephenic acid relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite +relationship: RO:0018033 CHEBI:16666 ! is deprotonated form of prephenic acid [Term] id: CHEBI:57867 name: nucleoside 5'-phosphate dianion def: "The conjugate base of a nucleoside 5'-phosphate." [] -subset: 3_STAR -synonym: "a nucleoside 5'-phosphate" RELATED [UniProt] -synonym: "nucleoside 5'-phosphate dianions" RELATED [ChEBI] +subset: 3:STAR +synonym: "a nucleoside 5'-phosphate" RELATED [uniprot_ft] +synonym: "nucleoside 5'-phosphate dianions" RELATED [chebi] is_a: CHEBI:58945 ! organophosphate oxoanion -relationship: is_conjugate_base_of CHEBI:16701 ! nucleoside 5'-phosphate +relationship: RO:0018033 CHEBI:16701 ! is deprotonated form of nucleoside 5'-phosphate [Term] id: CHEBI:57887 name: tryptaminium def: "An ammonium ion that is the conjugate acid of tryptamine arising from protonation of the primary amino group; major species at pH 7.3." [] -subset: 3_STAR -synonym: "2-(1H-indol-3-yl)ethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "tryptamine" RELATED [UniProt] -synonym: "tryptaminium cation" RELATED [ChEBI] -synonym: "tryptaminium(1+)" RELATED [ChEBI] -xref: Gmelin:533978 {source="Gmelin"} +subset: 3:STAR +synonym: "2-(1H-indol-3-yl)ethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(1H-indol-3-yl)ethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "tryptamine" RELATED [uniprot_ft] +synonym: "tryptaminium cation" RELATED [chebi] +synonym: "tryptaminium(1+)" RELATED [chebi] +xref: gmelin:533978 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:65296 ! primary ammonium ion -relationship: is_conjugate_acid_of CHEBI:16765 ! tryptamine relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:76924 ! has role plant metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:16765 ! is protonated form of tryptamine [Term] id: CHEBI:57930 name: nucleoside 5'-diphosphate(3-) def: "Trianion of nucleoside diphosphate arising from deprotonation of all three free OH groups of the diphosphate; major species at pH 7.3." [] -subset: 3_STAR -synonym: "a ribonucleoside 5'-diphosphate" RELATED [UniProt] -synonym: "NDP trianion" RELATED [ChEBI] -synonym: "NDP(3-)" RELATED [ChEBI] -synonym: "nucleoside diphosphate trianion" RELATED [ChEBI] -synonym: "ribonucleoside diphosphate trianion" RELATED [ChEBI] -synonym: "ribonucleoside diphosphate(3-)" RELATED [ChEBI] +subset: 3:STAR +synonym: "a ribonucleoside 5'-diphosphate" RELATED [uniprot_ft] +synonym: "NDP trianion" RELATED [chebi] +synonym: "NDP(3-)" RELATED [chebi] +synonym: "nucleoside diphosphate trianion" RELATED [chebi] +synonym: "ribonucleoside diphosphate trianion" RELATED [chebi] +synonym: "ribonucleoside diphosphate(3-)" RELATED [chebi] is_a: CHEBI:58945 ! organophosphate oxoanion -relationship: is_conjugate_base_of CHEBI:16862 ! nucleoside 5'-diphosphate +relationship: RO:0018033 CHEBI:16862 ! is deprotonated form of nucleoside 5'-diphosphate [Term] id: CHEBI:57977 name: bilirubin(2-) def: "A dicarboxylic acid dianion obtained by deprotonation of the two carboxy groups of bilirubin; major species at pH 7.3." [] -subset: 3_STAR -synonym: "(4Z,15Z)-bilirubin IXalpha" RELATED [UniProt] -synonym: "2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoate" RELATED [ChEBI] -synonym: "bilirubin dianion" RELATED [ChEBI] -xref: Beilstein:4083310 {source="Beilstein"} +subset: 3:STAR +synonym: "(4Z,15Z)-bilirubin IX-alpha" RELATED [uniprot_ft] +synonym: "2,7,13,17-tetramethyl-1,19-dioxo-3,18-divinyl-1,10,19,22,23,24-hexahydro-21H-biline-8,12-dipropanoate" RELATED [chebi] +synonym: "bilirubin dianion" RELATED [chebi] +xref: beilstein:4083310 {source="beilstein"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:28965 ! dicarboxylic acid dianion is_a: CHEBI:59252 ! linear tetrapyrrole anion -relationship: is_conjugate_base_of CHEBI:16990 ! bilirubin IXalpha relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018033 CHEBI:16990 ! is deprotonated form of bilirubin IXalpha [Term] id: CHEBI:57981 name: D-phenylalanine zwitterion -def: "A D-alpha-amino acid zwitterion that is D-phenylalanine in which a proton has been transferred from the carboxy group to the amino group. It is the major species at pH 7.3." [] -subset: 3_STAR -synonym: "(2R)-2-ammonio-3-phenylpropanoate" RELATED [IUPAC] -synonym: "(2R)-2-azaniumyl-3-phenylpropanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "D-phenylalanine" RELATED [UniProt] -xref: MetaCyc:CPD-216 +def: "A D-α-amino acid zwitterion that is D-phenylalanine in which a proton has been transferred from the carboxy group to the amino group. It is the major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2R)-2-ammonio-3-phenylpropanoate" RELATED [iupac] +synonym: "(2R)-2-azaniumyl-3-phenylpropanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-azaniumyl-3-phenylpropanoate" RELATED IUPAC:NAME [iupac] +synonym: "D-phenylalanine" RELATED [uniprot_ft] +xref: metacyc.compound:CPD-216 {source="metacyc.compound"} is_a: CHEBI:59871 ! D-alpha-amino acid zwitterion -relationship: is_enantiomer_of CHEBI:58095 ! L-phenylalanine zwitterion -relationship: is_tautomer_of CHEBI:16998 ! D-phenylalanine +relationship: RO:0018036 CHEBI:16998 ! is tautomer of D-phenylalanine +relationship: RO:0018039 CHEBI:58095 ! is enantiomer of L-phenylalanine zwitterion [Term] id: CHEBI:58095 name: L-phenylalanine zwitterion -def: "An amino acid zwitterion arising from transfer of a proton from the carboxy to the amino group of L-phenylalanine; major species at pH 7.3." [] -subset: 3_STAR -synonym: "(2S)-2-ammonio-3-phenylpropanoate" RELATED [IUPAC] -synonym: "(2S)-2-azaniumyl-3-phenylpropanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-phenylalanine" RELATED [UniProt] -synonym: "phenylalanine" RELATED [ChEBI] -xref: MetaCyc:PHE -xref: PMID:21956539 {source="Europe PMC"} +def: "An amino acid zwitterion arising from transfer of a proton from the carboxy to the amino group of L-phenylalanine; major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2S)-2-ammonio-3-phenylpropanoate" RELATED [iupac] +synonym: "(2S)-2-azaniumyl-3-phenylpropanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-azaniumyl-3-phenylpropanoate" RELATED IUPAC:NAME [iupac] +synonym: "L-phenylalanine" RELATED [uniprot_ft] +synonym: "phenylalanine" RELATED [chebi] +xref: metacyc.compound:PHE {source="metacyc.compound"} +xref: pubmed:21956539 {source="pubmed"} is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_enantiomer_of CHEBI:57981 ! D-phenylalanine zwitterion -relationship: is_tautomer_of CHEBI:17295 ! L-phenylalanine +relationship: RO:0018036 CHEBI:17295 ! is tautomer of L-phenylalanine +relationship: RO:0018039 CHEBI:57981 ! is enantiomer of D-phenylalanine zwitterion [Term] id: CHEBI:58104 name: nucleoside 5'-triphoshate(3-) def: "Trianion of nucleoside triphosphate arising from deprotonation of three of the four free triphosphate OH groups." [] -subset: 3_STAR -synonym: "NTP trianion" RELATED [ChEBI] -synonym: "NTP(3-)" RELATED [ChEBI] -synonym: "nucleoside triphosphate trianion" RELATED [ChEBI] -synonym: "ribonucleoside triphosphate trianion" RELATED [ChEBI] -synonym: "ribonucleoside triphosphate(3-)" RELATED [ChEBI] +subset: 3:STAR +synonym: "NTP trianion" RELATED [chebi] +synonym: "NTP(3-)" RELATED [chebi] +synonym: "nucleoside triphosphate trianion" RELATED [chebi] +synonym: "ribonucleoside triphosphate trianion" RELATED [chebi] +synonym: "ribonucleoside triphosphate(3-)" RELATED [chebi] is_a: CHEBI:59724 ! ribonucleoside triphosphate oxoanion -relationship: is_conjugate_acid_of CHEBI:61557 ! nucleoside 5'-triphoshate(4-) -relationship: is_conjugate_base_of CHEBI:17326 ! nucleoside 5'-triphoshate +relationship: RO:0018033 CHEBI:17326 ! is deprotonated form of nucleoside 5'-triphoshate +relationship: RO:0018034 CHEBI:61557 ! is protonated form of nucleoside 5'-triphoshate(4-) [Term] id: CHEBI:58315 name: L-tyrosine zwitterion -def: "An amino acid zwitterion arising from transfer of a proton from the carboxy to the amino group of L-tyrosine; major species at pH 7.3." [] -subset: 3_STAR -synonym: "(2S)-2-ammonio-3-(4-hydroxyphenyl)propanoate" RELATED [IUPAC] -synonym: "(2S)-2-azaniumyl-3-(4-hydroxyphenyl)propanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "L-tyrosine" RELATED [UniProt] +def: "An amino acid zwitterion arising from transfer of a proton from the carboxy to the amino group of L-tyrosine; major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2S)-2-ammonio-3-(4-hydroxyphenyl)propanoate" RELATED [iupac] +synonym: "(2S)-2-azaniumyl-3-(4-hydroxyphenyl)propanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-azaniumyl-3-(4-hydroxyphenyl)propanoate" RELATED IUPAC:NAME [iupac] +synonym: "L-tyrosine" RELATED [uniprot_ft] is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_conjugate_acid_of CHEBI:32760 ! L-tyrosinate(1-) -relationship: is_conjugate_base_of CHEBI:32762 ! L-tyrosinium -relationship: is_tautomer_of CHEBI:17895 ! L-tyrosine +relationship: RO:0018033 CHEBI:32762 ! is deprotonated form of L-tyrosinium +relationship: RO:0018034 CHEBI:32760 ! is protonated form of L-tyrosinate(1-) +relationship: RO:0018036 CHEBI:17895 ! is tautomer of L-tyrosine [Term] id: CHEBI:58432 name: histaminium def: "An ammonium ion that is the conjugate acid of histamine protonated on the side-chain nitrogen." [] -subset: 3_STAR -synonym: "2-(1H-imidazol-4-yl)ethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "histamine" RELATED [UniProt] -synonym: "histaminium cation" RELATED [ChEBI] +subset: 3:STAR +synonym: "2-(1H-imidazol-4-yl)ethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(1H-imidazol-4-yl)ethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "histamine" RELATED [uniprot_ft] +synonym: "histaminium cation" RELATED [chebi] is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35274 ! ammonium ion derivative -relationship: is_conjugate_acid_of CHEBI:18295 ! histamine relationship: RO:0000087 CHEBI:75771 ! has role mouse metabolite relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:18295 ! is protonated form of histamine [Term] id: CHEBI:58570 name: D-tyrosine zwitterion -def: "A D-alpha-amino acid zwitterion that is D-tyrosine in which a proton has been transferred from the carboxy group to the amino group. It is the major species at pH 7.3." [] -subset: 3_STAR -synonym: "(2R)-2-ammonio-3-(4-hydroxyphenyl)propanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "D-tyrosine" RELATED [UniProt] -xref: MetaCyc:D-TYROSINE +def: "A D-α-amino acid zwitterion that is D-tyrosine in which a proton has been transferred from the carboxy group to the amino group. It is the major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2R)-2-ammonio-3-(4-hydroxyphenyl)propanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-ammonio-3-(4-hydroxyphenyl)propanoate" RELATED IUPAC:NAME [iupac] +synonym: "D-tyrosine" RELATED [uniprot_ft] +xref: metacyc.compound:D-TYROSINE {source="metacyc.compound"} is_a: CHEBI:59871 ! D-alpha-amino acid zwitterion -relationship: is_tautomer_of CHEBI:28479 ! D-tyrosine +relationship: RO:0018036 CHEBI:28479 ! is tautomer of D-tyrosine [Term] id: CHEBI:58942 name: cationic amino-acid residue def: "An amino-acid residue protonated on nitrogen." [] -subset: 3_STAR -synonym: "amino acid cation residue" RELATED [ChEBI] -synonym: "amino acid cation residues" RELATED [ChEBI] -synonym: "amino-acid cation residue" RELATED [ChEBI] -synonym: "amino-acid cation residues" RELATED [ChEBI] -synonym: "cationic amino acid residue" RELATED [ChEBI] -synonym: "cationic amino acid residues" RELATED [ChEBI] -synonym: "cationic amino-acid residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino acid cation residue" RELATED [chebi] +synonym: "amino acid cation residues" RELATED [chebi] +synonym: "amino-acid cation residue" RELATED [chebi] +synonym: "amino-acid cation residues" RELATED [chebi] +synonym: "cationic amino acid residue" RELATED [chebi] +synonym: "cationic amino acid residues" RELATED [chebi] +synonym: "cationic amino-acid residues" RELATED [chebi] is_a: CHEBI:64769 ! organic cationic group -relationship: is_conjugate_acid_of CHEBI:33708 ! amino-acid residue +relationship: RO:0018034 CHEBI:33708 ! is protonated form of amino-acid residue [Term] id: CHEBI:58945 name: organophosphate oxoanion def: "An organic phosphoric acid derivative in which one or more oxygen atoms of the phosphate group(s) has been deprotonated." [] -subset: 3_STAR -synonym: "organophosphate oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "organophosphate oxoanions" RELATED [chebi] is_a: CHEBI:25696 ! organic anion is_a: CHEBI:26079 ! phosphoric acid derivative [Term] id: CHEBI:58951 name: short-chain fatty acid anion -def: "Any fatty acid anion obtained by removal of a proton from the carboxy group of a short-chain fatty acid (chain length of less than C6)." [] -subset: 3_STAR -synonym: "a short-chain fatty acid" RELATED [UniProt] -synonym: "short-chain fatty acid anions" RELATED [ChEBI] +def: "Any fatty acid anion obtained by removal of a proton from the carboxy group of a short-chain fatty acid (chain length of less than C6)." [] +subset: 3:STAR +synonym: "a short-chain fatty acid" RELATED [uniprot_ft] +synonym: "short-chain fatty acid anions" RELATED [chebi] is_a: CHEBI:28868 ! fatty acid anion -relationship: is_conjugate_base_of CHEBI:26666 ! short-chain fatty acid +relationship: RO:0018033 CHEBI:26666 ! is deprotonated form of short-chain fatty acid [Term] id: CHEBI:58953 name: saturated fatty acid anion -def: "Any fatty acid anion in which there is no C-C unsaturation." [] -subset: 3_STAR -synonym: "saturated fatty acid anions" RELATED [ChEBI] +def: "Any fatty acid anion in which there is no C‒C unsaturation." [] +subset: 3:STAR +synonym: "saturated fatty acid anions" RELATED [chebi] is_a: CHEBI:28868 ! fatty acid anion [Term] id: CHEBI:58954 name: straight-chain saturated fatty acid anion def: "Any saturated fatty acid anion lacking a carbon side-chain." [] -subset: 3_STAR -synonym: "straight-chain saturated fatty acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "straight-chain saturated fatty acid anions" RELATED [chebi] is_a: CHEBI:58953 ! saturated fatty acid anion -relationship: is_conjugate_base_of CHEBI:39418 ! straight-chain saturated fatty acid +relationship: RO:0018033 CHEBI:39418 ! is deprotonated form of straight-chain saturated fatty acid [Term] id: CHEBI:58958 name: organosulfate oxoanion -def: "An organic anion of general formula RS(=O)2O(-) where R is an organyl group." [] -subset: 3_STAR -synonym: "organosulfate oxoanions" RELATED [ChEBI] +def: "An organic anion of general formula RS(=O)2O(−) where R is an organyl group." [] +subset: 3:STAR +synonym: "organosulfate oxoanions" RELATED [chebi] is_a: CHEBI:25696 ! organic anion is_a: CHEBI:33482 ! sulfur oxoanion -relationship: has_functional_parent CHEBI:16189 ! sulfate -relationship: is_conjugate_base_of CHEBI:25704 ! organic sulfate +relationship: RO:0018033 CHEBI:25704 ! is deprotonated form of organic sulfate +relationship: RO:0018038 CHEBI:16189 ! has functional parent sulfate [Term] id: CHEBI:59132 name: antigen def: "Any substance that stimulates an immune response in the body, such as through antibody production or by presentation to a T-cell receptor after binding to a major histocompability complex (MHC)." [] -subset: 3_STAR -synonym: "antigens" RELATED [ChEBI] +subset: 3:STAR +synonym: "antigens" RELATED [chebi] is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:59202 name: straight-chain fatty acid def: "Any fatty acid whose skeletal carbon atoms form an unbranched open chain." [] -subset: 3_STAR -synonym: "straight-chain fatty acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "straight-chain fatty acids" RELATED [chebi] is_a: CHEBI:35366 ! fatty acid -relationship: is_conjugate_acid_of CHEBI:59203 ! straight-chain fatty acid anion +relationship: RO:0018034 CHEBI:59203 ! is protonated form of straight-chain fatty acid anion [Term] id: CHEBI:59203 name: straight-chain fatty acid anion def: "A fatty acid anion formed by deprotonation of the carboxylic acid functional group of a straight-chain fatty acid." [] -subset: 3_STAR -synonym: "straight-chain FA anion" RELATED [ChEBI] -synonym: "straight-chain FA anions" RELATED [ChEBI] -synonym: "straight-chain fatty acid anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "straight-chain FA anion" RELATED [chebi] +synonym: "straight-chain FA anions" RELATED [chebi] +synonym: "straight-chain fatty acid anions" RELATED [chebi] is_a: CHEBI:28868 ! fatty acid anion -relationship: is_conjugate_base_of CHEBI:59202 ! straight-chain fatty acid +relationship: RO:0018033 CHEBI:59202 ! is deprotonated form of straight-chain fatty acid [Term] id: CHEBI:59252 name: linear tetrapyrrole anion def: "An organic anion arising from deprotonation of a acyclic tetrapyrrole compound." [] -subset: 3_STAR -synonym: "acyclic tetrapyrrole anion" RELATED [ChEBI] -synonym: "acyclic tetrapyrrole anions" RELATED [ChEBI] -synonym: "linear tetrapyrrole anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "acyclic tetrapyrrole anion" RELATED [chebi] +synonym: "acyclic tetrapyrrole anions" RELATED [chebi] +synonym: "linear tetrapyrrole anions" RELATED [chebi] is_a: CHEBI:25696 ! organic anion [Term] id: CHEBI:59698 name: phosphoric acids def: "Compounds containing one or more phosphoric acid units." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:33457 ! phosphorus oxoacid [Term] id: CHEBI:59724 name: ribonucleoside triphosphate oxoanion def: "An organophosphate anion resulting from deprotonation of at least one of the acidic hydroxy groups from the triphosphate moiety of a nucleoside triphosphate." [] -subset: 3_STAR -synonym: "ribonucleoside triphosphate anion" RELATED [ChEBI] -synonym: "ribonucleoside triphosphate anions" RELATED [ChEBI] -synonym: "ribonucleoside triphosphate oxoanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "ribonucleoside triphosphate anion" RELATED [chebi] +synonym: "ribonucleoside triphosphate anions" RELATED [chebi] +synonym: "ribonucleoside triphosphate oxoanions" RELATED [chebi] is_a: CHEBI:58945 ! organophosphate oxoanion [Term] id: CHEBI:59740 name: nucleophilic reagent def: "A reagent that forms a bond to its reaction partner (the electrophile) by donating both bonding electrons." [] -subset: 3_STAR -synonym: "nucleophile" RELATED [ChEBI] -synonym: "nucleophiles" RELATED [ChEBI] -synonym: "nucleophilic reagents" RELATED [ChEBI] +subset: 3:STAR +synonym: "nucleophile" RELATED [chebi] +synonym: "nucleophiles" RELATED [chebi] +synonym: "nucleophilic reagents" RELATED [chebi] is_a: CHEBI:33893 ! reagent is_a: CHEBI:39144 ! Lewis base [Term] id: CHEBI:59814 name: L-alpha-amino acid anion -def: "Conjugate base of an L-alpha-amino acid arising from deprotonation of the C-1 carboxy group." [] -subset: 3_STAR -synonym: "L-alpha-amino carboxylate" RELATED [ChEBI] +def: "Conjugate base of an L-α-amino acid arising from deprotonation of the C-1 carboxy group." [] +subset: 3:STAR +synonym: "L-alpha-amino carboxylate" RELATED [chebi] is_a: CHEBI:33558 ! alpha-amino-acid anion -relationship: is_conjugate_base_of CHEBI:15705 ! L-alpha-amino acid +relationship: RO:0018033 CHEBI:15705 ! is deprotonated form of L-alpha-amino acid [Term] id: CHEBI:59826 name: progestin def: "A synthetic progestogen." [] -subset: 3_STAR -synonym: "progestins" RELATED [ChEBI] -xref: Wikipedia:Progestin +subset: 3:STAR +synonym: "progestins" RELATED [chebi] +xref: wikipedia.en:Progestin {source="wikipedia.en"} is_a: CHEBI:50745 ! progestogen [Term] id: CHEBI:59869 name: L-alpha-amino acid zwitterion -def: "Zwitterionic form of an L-alpha-amino acid having an anionic carboxy group and a protonated amino group." [] -subset: 3_STAR -synonym: "an L-alpha-amino acid" RELATED [UniProt] -synonym: "L-alpha-amino acid zwitterions" RELATED [ChEBI] +def: "Zwitterionic form of an L-α-amino acid having an anionic carboxy group and a protonated amino group." [] +subset: 3:STAR +synonym: "an L-alpha-amino acid" RELATED [uniprot_ft] +synonym: "L-alpha-amino acid zwitterions" RELATED [chebi] is_a: CHEBI:78608 ! alpha-amino-acid zwitterion -relationship: is_tautomer_of CHEBI:15705 ! L-alpha-amino acid +relationship: RO:0018036 CHEBI:15705 ! is tautomer of L-alpha-amino acid [Term] id: CHEBI:59871 name: D-alpha-amino acid zwitterion -def: "Zwitterionic form of a D-alpha-amino acid having an anionic carboxy group and a protonated amino group." [] -subset: 3_STAR -synonym: "a D-alpha-amino acid" RELATED [UniProt] -synonym: "D-alpha-amino acid zwitterions" RELATED [ChEBI] +def: "Zwitterionic form of a D-α-amino acid having an anionic carboxy group and a protonated amino group." [] +subset: 3:STAR +synonym: "a D-alpha-amino acid" RELATED [uniprot_ft] +synonym: "D-alpha-amino acid zwitterions" RELATED [chebi] is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_tautomer_of CHEBI:16733 ! D-alpha-amino acid +relationship: RO:0018036 CHEBI:16733 ! is tautomer of D-alpha-amino acid [Term] id: CHEBI:59888 name: gamma-aminobutyric acid zwitterion -def: "Zwitterionic form of gamma-aminobutyric acid having an anionic carboxy group and a protonated amino group." [] -subset: 3_STAR -synonym: "4-aminobutanoate" RELATED [UniProt] -synonym: "4-ammoniobutanoate" RELATED [ChEBI] -synonym: "4-azaniumylbutanoate" EXACT IUPAC_NAME [IUPAC] -xref: Gmelin:1041559 {source="Gmelin"} +def: "Zwitterionic form of γ-aminobutyric acid having an anionic carboxy group and a protonated amino group." [] +subset: 3:STAR +synonym: "4-aminobutanoate" RELATED [uniprot_ft] +synonym: "4-ammoniobutanoate" RELATED [chebi] +synonym: "4-azaniumylbutanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "4-azaniumylbutanoate" RELATED IUPAC:NAME [iupac] +xref: gmelin:1041559 {source="gmelin"} is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_tautomer_of CHEBI:16865 ! gamma-aminobutyric acid +relationship: RO:0018036 CHEBI:16865 ! is tautomer of gamma-aminobutyric acid [Term] id: CHEBI:59905 name: dopaminium(1+) def: "An ammonium ion that is the conjugate acid of dopamine; major species at pH 7.3." [] -subset: 3_STAR -synonym: "2-(3,4-dihydroxyphenyl)ethan-1-aminium" RELATED [ChEBI] -synonym: "2-(3,4-dihydroxyphenyl)ethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "dopamine" RELATED [UniProt] -synonym: "dopaminium cation" RELATED [ChEBI] -xref: Gmelin:328863 {source="Gmelin"} +subset: 3:STAR +synonym: "2-(3,4-dihydroxyphenyl)ethan-1-aminium" RELATED [chebi] +synonym: "2-(3,4-dihydroxyphenyl)ethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "2-(3,4-dihydroxyphenyl)ethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "dopamine" RELATED [uniprot_ft] +synonym: "dopaminium cation" RELATED [chebi] +xref: gmelin:328863 {source="gmelin"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:35274 ! ammonium ion derivative -relationship: is_conjugate_acid_of CHEBI:18243 ! dopamine relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:18243 ! is protonated form of dopamine [Term] id: CHEBI:59999 name: chemical substance def: "A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types." [] -subset: 3_STAR -synonym: "Chemische Substanz" RELATED [ChEBI] +subset: 3:STAR +synonym: "Chemische Substanz" RELATED [chebi] is_a: CHEBI:24431 ! chemical entity [Term] id: CHEBI:60004 name: mixture def: "A mixture is a chemical substance composed of multiple molecules, at least two of which are of a different kind." [] -subset: 3_STAR -synonym: "Mischung" RELATED [ChEBI] +subset: 3:STAR +synonym: "Mischung" RELATED [chebi] is_a: CHEBI:59999 ! chemical substance [Term] id: CHEBI:60027 name: polymer def: "A polymer is a mixture, which is composed of macromolecules of different kinds and which may be differentiated by composition, length, degree of branching etc.." [] -subset: 3_STAR -synonym: "Kunststoff" RELATED [ChEBI] -synonym: "Polymer" EXACT [ChEBI] -xref: Wikipedia:Polymer +subset: 3:STAR +synonym: "Kunststoff" RELATED [chebi] +synonym: "Polymer" RELATED [chebi] +xref: wikipedia.en:Polymer {source="wikipedia.en"} is_a: CHEBI:60004 ! mixture relationship: has_part CHEBI:33839 ! macromolecule @@ -11850,8 +12363,8 @@ relationship: has_part CHEBI:33839 ! macromolecule id: CHEBI:60164 name: ionic polymer def: "An ionic polymer is a polymer, composed of ionic macromolecules." [] -subset: 3_STAR -synonym: "polyionic polymer" RELATED [ChEBI] +subset: 3:STAR +synonym: "polyionic polymer" RELATED [chebi] is_a: CHEBI:60027 ! polymer relationship: has_part CHEBI:53368 ! ionic macromolecule @@ -11859,8 +12372,8 @@ relationship: has_part CHEBI:53368 ! ionic macromolecule id: CHEBI:60240 name: divalent metal cation def: "A metal cation with a valence of two." [] -subset: 3_STAR -synonym: "a divalent metal cation" RELATED [UniProt] +subset: 3:STAR +synonym: "a divalent metal cation" RELATED [uniprot_ft] is_a: CHEBI:25213 ! metal cation is_a: CHEBI:64641 ! divalent inorganic cation @@ -11868,116 +12381,114 @@ is_a: CHEBI:64641 ! divalent inorganic cation id: CHEBI:60242 name: monovalent inorganic cation def: "An atom or small molecule with a positive charge that does not contain carbon in covalent linkage, with a valency of one." [] -subset: 3_STAR -synonym: "a monovalent cation" RELATED [UniProt] +subset: 3:STAR +synonym: "a monovalent cation" RELATED [uniprot_ft] is_a: CHEBI:36915 ! inorganic cation [Term] id: CHEBI:60466 name: peptide zwitterion def: "Zwitterionic form of any peptide where, in general, the amino terminus is positively charged and the carboxy terminus is negatively charged." [] -subset: 3_STAR -synonym: "a peptide" RELATED [UniProt] -synonym: "peptide zwitterions" RELATED [ChEBI] +subset: 3:STAR +synonym: "a peptide" RELATED [uniprot_ft] +synonym: "peptide zwitterions" RELATED [chebi] is_a: CHEBI:27369 ! zwitterion -relationship: is_tautomer_of CHEBI:16670 ! peptide +relationship: RO:0018036 CHEBI:16670 ! is tautomer of peptide [Term] id: CHEBI:60809 name: adjuvant def: "Any pharmacological or immunological agent that modifies the effect of other agents such as drugs or vaccines while having few if any direct effects when given by itself." [] -subset: 3_STAR -synonym: "adjuvants" RELATED [ChEBI] +subset: 3:STAR +synonym: "adjuvants" RELATED [chebi] is_a: CHEBI:52217 ! pharmaceutical [Term] id: CHEBI:60816 name: immunogen def: "An antigen capable, on its own, of inducing an immune response." [] -subset: 3_STAR -xref: PMID:19152635 {source="Europe PMC"} -xref: PMID:19328011 {source="Europe PMC"} -xref: PMID:19397283 {source="Europe PMC"} +subset: 3:STAR +xref: pubmed:19152635 {source="pubmed"} +xref: pubmed:19328011 {source="pubmed"} +xref: pubmed:19397283 {source="pubmed"} is_a: CHEBI:59132 ! antigen [Term] id: CHEBI:60895 name: D-alpha-amino acid anion -def: "Any alpha-amino acid anion in which the parent amino acid has D-configuration." [] -subset: 3_STAR -synonym: "D-alpha-amino acid anions" RELATED [ChEBI] -synonym: "D-alpha-amino carboxylate" RELATED [ChEBI] +def: "Any α-amino acid anion in which the parent amino acid has D-configuration." [] +subset: 3:STAR +synonym: "D-alpha-amino acid anions" RELATED [chebi] +synonym: "D-alpha-amino carboxylate" RELATED [chebi] is_a: CHEBI:33558 ! alpha-amino-acid anion -relationship: is_conjugate_base_of CHEBI:16733 ! D-alpha-amino acid +relationship: RO:0018033 CHEBI:16733 ! is deprotonated form of D-alpha-amino acid [Term] id: CHEBI:60924 name: keratan sulfate -def: "A sulfated glycosaminoglycan, a linear polymer that consists of the repeating disaccharide [3)-beta-Gal-(1->4)-beta-GlcNAc-(1->] and containing sulfo groups located at random positions." [] -subset: 3_STAR -synonym: "keratan sulfates" RELATED [ChEBI] -synonym: "keratosulfate" RELATED [SUBMITTER] +def: "A sulfated glycosaminoglycan, a linear polymer that consists of the repeating disaccharide [3)-β-Gal-(1→4)-β-GlcNAc-(1→] and containing sulfo groups located at random positions." [] +subset: 3:STAR +synonym: "keratan sulfates" RELATED [chebi] is_a: CHEBI:35722 ! sulfated glycosaminoglycan is_a: CHEBI:37395 ! mucopolysaccharide -relationship: has_functional_parent CHEBI:29057 ! keratan +relationship: RO:0018038 CHEBI:29057 ! has functional parent keratan [Term] id: CHEBI:60926 name: amino monosaccharide def: "Any amino sugar that is a monosaccharide in which one alcoholic hydroxy group is replaced by an amino group." [] -subset: 3_STAR -synonym: "amino monosaccharides" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino monosaccharides" RELATED [chebi] is_a: CHEBI:28963 ! amino sugar [Term] id: CHEBI:61115 name: EC 3.5.1.98 (histone deacetylase) inhibitor def: "An EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor that interferes with the function of histone deacetylase (EC 3.5.1.98)." [] -subset: 3_STAR -synonym: "EC 3.5.1.98 (histone deacetylase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.1.98 inhibitor" RELATED [ChEBI] -synonym: "EC 3.5.1.98 inhibitors" RELATED [ChEBI] -synonym: "HDAC inhibitor" RELATED [ChEBI] -synonym: "HDAC inhibitors" RELATED [ChEBI] -synonym: "HDACi" RELATED [ChEBI] -synonym: "HDACis" RELATED [ChEBI] -synonym: "HDI" RELATED [ChEBI] -synonym: "HDIs" RELATED [ChEBI] -synonym: "histone amidohydrolase inhibitor" RELATED [ChEBI] -synonym: "histone amidohydrolase inhibitors" RELATED [ChEBI] -synonym: "histone deacetylase (EC 3.5.1.98) inhibitor" RELATED [ChEBI] -synonym: "histone deacetylase (EC 3.5.1.98) inhibitors" RELATED [ChEBI] -synonym: "histone deacetylase inhibitor" RELATED [ChEBI] -synonym: "histone deacetylase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Histone_deacetylase_inhibitor +subset: 3:STAR +synonym: "EC 3.5.1.98 (histone deacetylase) inhibitors" RELATED [chebi] +synonym: "EC 3.5.1.98 inhibitor" RELATED [chebi] +synonym: "EC 3.5.1.98 inhibitors" RELATED [chebi] +synonym: "HDAC inhibitor" RELATED [chebi] +synonym: "HDAC inhibitors" RELATED [chebi] +synonym: "HDACi" RELATED [chebi] +synonym: "HDACis" RELATED [chebi] +synonym: "HDI" RELATED [chebi] +synonym: "HDIs" RELATED [chebi] +synonym: "histone amidohydrolase inhibitor" RELATED [chebi] +synonym: "histone amidohydrolase inhibitors" RELATED [chebi] +synonym: "histone deacetylase (EC 3.5.1.98) inhibitor" RELATED [chebi] +synonym: "histone deacetylase (EC 3.5.1.98) inhibitors" RELATED [chebi] +synonym: "histone deacetylase inhibitor" RELATED [chebi] +synonym: "histone deacetylase inhibitors" RELATED [chebi] +xref: wikipedia.en:Histone_deacetylase_inhibitor {source="wikipedia.en"} is_a: CHEBI:76807 ! EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor [Term] id: CHEBI:61120 name: nucleobase-containing molecular entity def: "Any compound that has a nucleobase as a part." [] -subset: 3_STAR -synonym: "nucleobase-containing compound" RELATED [SUBMITTER] -synonym: "nucleobase-containing compounds" RELATED [ChEBI] -synonym: "nucleobase-containing molecular entities" RELATED [ChEBI] +subset: 3:STAR +synonym: "nucleobase-containing compound" RELATED [submitter] +synonym: "nucleobase-containing compounds" RELATED [chebi] +synonym: "nucleobase-containing molecular entities" RELATED [chebi] is_a: CHEBI:33833 ! heteroarene is_a: CHEBI:51143 ! nitrogen molecular entity -relationship: has_functional_parent CHEBI:18282 ! nucleobase +relationship: RO:0018038 CHEBI:18282 ! has functional parent nucleobase [Term] id: CHEBI:61293 name: adenyl nucleotide def: "A nucleotide having adenine as the base." [] -subset: 3_STAR -synonym: "adenine nucleotide" RELATED [SUBMITTER] +subset: 3:STAR is_a: CHEBI:26395 ! purine nucleotide [Term] id: CHEBI:61296 name: adenyl ribonucleotide def: "A purine riboncleotide where adenine is the purine." [] -subset: 3_STAR -synonym: "adenine ribonucleotide" RELATED [SUBMITTER] +subset: 3:STAR +synonym: "adenine ribonucleotide" RELATED [submitter] is_a: CHEBI:26400 ! purine ribonucleotide is_a: CHEBI:61293 ! adenyl nucleotide @@ -11985,17 +12496,17 @@ is_a: CHEBI:61293 ! adenyl nucleotide id: CHEBI:61313 name: C21-steroid def: "A steroid that has a structure based on a 21-carbon (pregnane) skeleton. Note that individual examples may have ring substituents at other positions and/or contain double bonds, aromatic A-rings, expanded/contracted rings etc., so the formula and mass may vary from that given for the generic structure." [] -subset: 3_STAR -synonym: "a C21-steroid" RELATED [UniProt] +subset: 3:STAR +synonym: "a C(21)-steroid" RELATED [uniprot_ft] is_a: CHEBI:35341 ! steroid [Term] id: CHEBI:61469 name: polyanionic polymer def: "A polymer, composed of polyanion macromolecules." [] -subset: 3_STAR -synonym: "polyanion" RELATED [ChEBI] -synonym: "polyanions" RELATED [ChEBI] +subset: 3:STAR +synonym: "polyanion" RELATED [chebi] +synonym: "polyanions" RELATED [chebi] is_a: CHEBI:60164 ! ionic polymer relationship: has_part CHEBI:53309 ! polyanionic macromolecule @@ -12003,117 +12514,112 @@ relationship: has_part CHEBI:53309 ! polyanionic macromolecule id: CHEBI:61557 name: nucleoside 5'-triphoshate(4-) def: "A ribonucleoside triphosphate oxoanion arising from global deprotonation of the triphosphate groups of any nucleoside triphosphate; major species at pH 7.3." [] -subset: 3_STAR -synonym: "a ribonucleoside 5'-triphosphate" RELATED [UniProt] -synonym: "NTP tetraanion" RELATED [ChEBI] -synonym: "NTP(4-)" RELATED [SUBMITTER] -synonym: "nucleoside 5'-triphosphate tetraanion" RELATED [ChEBI] -synonym: "nucleoside triphosphate(4-)" RELATED [ChEBI] +subset: 3:STAR +synonym: "a ribonucleoside 5'-triphosphate" RELATED [uniprot_ft] +synonym: "NTP tetraanion" RELATED [chebi] +synonym: "NTP(4-)" RELATED [submitter] +synonym: "nucleoside 5'-triphosphate tetraanion" RELATED [chebi] +synonym: "nucleoside triphosphate(4-)" RELATED [chebi] is_a: CHEBI:59724 ! ribonucleoside triphosphate oxoanion -relationship: is_conjugate_base_of CHEBI:58104 ! nucleoside 5'-triphoshate(3-) +relationship: RO:0018033 CHEBI:58104 ! is deprotonated form of nucleoside 5'-triphoshate(3-) [Term] id: CHEBI:61972 name: O(4)-phospho-L-tyrosine residue -def: "An alpha-amino-acid residue derived from O(4)-phospho-L-tyrosine." [] -subset: 3_STAR -synonym: "O(4)-phosphotyrosine residue" RELATED [ChEBI] -synonym: "O-phospho-L-tyrosine residue" RELATED [ChEBI] -synonym: "O-phosphotyrosine residue" RELATED [ChEBI] +def: "An α-amino-acid residue derived from O4-phospho-L-tyrosine." [] +subset: 3:STAR +synonym: "O(4)-phosphotyrosine residue" RELATED [chebi] +synonym: "O-phospho-L-tyrosine residue" RELATED [chebi] +synonym: "O-phosphotyrosine residue" RELATED [chebi] is_a: CHEBI:83228 ! L-alpha-amino acid residue -relationship: is_conjugate_acid_of CHEBI:61978 ! O(4)-phosphonato-L-tyrosine(2-) residue -relationship: is_substituent_group_from CHEBI:37788 ! O(4)-phospho-L-tyrosine +relationship: RO:0018034 CHEBI:61978 ! is protonated form of O(4)-phosphonato-L-tyrosine(2-) residue +relationship: RO:0018037 CHEBI:37788 ! is substitutent group from O(4)-phospho-L-tyrosine [Term] id: CHEBI:61978 name: O(4)-phosphonato-L-tyrosine(2-) residue alt_id: CHEBI:82620 -def: "An alpha-amino-acid residue anion obtained by deprotonation of the phosphate OH groups of O(4)-phospho-L-tyrosine residue; major speices at pH 7.3." [] -subset: 3_STAR -synonym: "L-tyrosine-O-phosphate(2-) residue" RELATED [ChEBI] -synonym: "L-tyrosine-phosphate residue" RELATED [UniProt] +def: "An α-amino-acid residue anion obtained by deprotonation of the phosphate OH groups of O4-phospho-L-tyrosine residue; major speices at pH 7.3." [] +subset: 3:STAR +synonym: "L-tyrosine-O-phosphate(2-) residue" RELATED [chebi] +synonym: "L-tyrosine-phosphate residue" RELATED [uniprot_ft] is_a: CHEBI:35416 ! alpha-amino-acid residue anion -relationship: has_functional_parent CHEBI:46858 ! L-tyrosine residue -relationship: is_conjugate_base_of CHEBI:61972 ! O(4)-phospho-L-tyrosine residue -relationship: is_substituent_group_from CHEBI:62338 ! O(4)-phosphonato-L-tyrosine(2-) +relationship: RO:0018033 CHEBI:61972 ! is deprotonated form of O(4)-phospho-L-tyrosine residue +relationship: RO:0018037 CHEBI:62338 ! is substitutent group from O(4)-phosphonato-L-tyrosine(2-) +relationship: RO:0018038 CHEBI:46858 ! has functional parent L-tyrosine residue [Term] id: CHEBI:62031 name: polar amino acid zwitterion def: "Zwitterionic form of a polar amino acid having an anionic carboxy group and a protonated amino group." [] -subset: 2_STAR -synonym: "a polar amino acid" RELATED [UniProt] -xref: MetaCyc:Polar-amino-acids {source="SUBMITTER"} +subset: 2:STAR +synonym: "a polar amino acid" RELATED [uniprot_ft] +xref: metacyc.compound:Polar-amino-acids {source="metacyc.compound"} is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_tautomer_of CHEBI:26167 ! polar amino acid +relationship: RO:0018036 CHEBI:26167 ! is tautomer of polar amino acid [Term] id: CHEBI:62338 name: O(4)-phosphonato-L-tyrosine(2-) -def: "An optically active form of O(4)-phosphonatotyrosine(2-) having L-configuration." [] -subset: 3_STAR -synonym: "(2S)-2-ammonio-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED [IUPAC] -synonym: "(2S)-2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "4-O-phospho-L-tyrosine" RELATED [UniProt] -synonym: "O-phospho-L-tyrosine(2-)" RELATED [SUBMITTER] -synonym: "O-phosphono-L-tyrosine(2-)" RELATED [SUBMITTER] -synonym: "O-phosphotyrosine(2-)" RELATED [SUBMITTER] -synonym: "phosphonotyrosine(2-)" RELATED [SUBMITTER] -synonym: "phosphotyrosine(2-)" RELATED [SUBMITTER] -synonym: "tyrosine phosphate(2-)" RELATED [SUBMITTER] -xref: MetaCyc:CPD-3728 {source="SUBMITTER"} -xref: Reaxys:10774475 {source="Reaxys"} +def: "An optically active form of O4-phosphonatotyrosine(2−) having L-configuration." [] +subset: 3:STAR +synonym: "(2S)-2-ammonio-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED [iupac] +synonym: "(2S)-2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2S)-2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED IUPAC:NAME [iupac] +synonym: "4-O-phospho-L-tyrosine" RELATED [uniprot_ft] +xref: metacyc.compound:CPD-3728 {source="metacyc.compound"} +xref: reaxys:10774475 {source="reaxys"} is_a: CHEBI:74955 ! O(4)-phosphonatotyrosine(2-) -relationship: is_conjugate_base_of CHEBI:37788 ! O(4)-phospho-L-tyrosine -relationship: is_enantiomer_of CHEBI:74656 ! O(4)-phosphonato-D-tyrosine(2-) +relationship: RO:0018033 CHEBI:37788 ! is deprotonated form of O(4)-phospho-L-tyrosine +relationship: RO:0018039 CHEBI:74656 ! is enantiomer of O(4)-phosphonato-D-tyrosine(2-) [Term] id: CHEBI:62488 name: signalling molecule def: "A molecular messenger in which the molecule is specifically involved in transmitting information between cells. Such molecules are released from the cell sending the signal, cross over the gap between cells by diffusion, and interact with specific receptors in another cell, triggering a response in that cell by activating a series of enzyme controlled reactions which lead to changes inside the cell." [] -subset: 3_STAR -synonym: "signal molecule" RELATED [ChEBI] -synonym: "signal molecules" RELATED [ChEBI] -synonym: "signaling molecule" RELATED [ChEBI] -synonym: "signaling molecules" RELATED [ChEBI] -synonym: "signalling molecules" RELATED [ChEBI] +subset: 3:STAR +synonym: "signal molecule" RELATED [chebi] +synonym: "signal molecules" RELATED [chebi] +synonym: "signaling molecule" RELATED [chebi] +synonym: "signaling molecules" RELATED [chebi] +synonym: "signalling molecules" RELATED [chebi] is_a: CHEBI:33280 ! molecular messenger [Term] id: CHEBI:62643 name: anionic phospholipid -def: "Any organophosphate oxoanion that is a negatively charged phospholipid, e.g. phosphatidylserine(1-), phosphatidate(2-), phosphatidylglycerol(1-)." [] -subset: 3_STAR -synonym: "anionic phospholipids" RELATED [ChEBI] -synonym: "phospholipid anion" RELATED [ChEBI] -synonym: "phospholipid anions" RELATED [ChEBI] +def: "Any organophosphate oxoanion that is a negatively charged phospholipid, e.g. phosphatidylserine(1−), phosphatidate(2−), phosphatidylglycerol(1−)." [] +subset: 3:STAR +synonym: "anionic phospholipids" RELATED [chebi] +synonym: "phospholipid anion" RELATED [chebi] +synonym: "phospholipid anions" RELATED [chebi] is_a: CHEBI:58945 ! organophosphate oxoanion -relationship: is_conjugate_base_of CHEBI:16247 ! phospholipid +relationship: RO:0018033 CHEBI:16247 ! is deprotonated form of phospholipid [Term] id: CHEBI:62761 name: tyrosine derivative def: "An amino acid derivative resulting from reaction of tyrosine at the amino group or the carboxy group, any substitution of phenyl hydrogens, or from the replacement of any hydrogen of tyrosine by a heteroatom. The definition normally excludes peptides containing tyrosine residues." [] -subset: 3_STAR -synonym: "tyrosine derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "tyrosine derivatives" RELATED [chebi] is_a: CHEBI:25985 ! phenylalanine derivative -relationship: has_functional_parent CHEBI:18186 ! tyrosine +relationship: RO:0018038 CHEBI:18186 ! has functional parent tyrosine [Term] id: CHEBI:62803 name: fuel additive def: "Any additive that enhances the efficiency of fuel." [] -subset: 3_STAR -synonym: "fuel additives" RELATED [ChEBI] -synonym: "fuel enhancer" RELATED [ChEBI] +subset: 3:STAR +synonym: "fuel additives" RELATED [chebi] +synonym: "fuel enhancer" RELATED [chebi] is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:62941 name: glycosylceramide def: "A ceramide compound formed by the replacement of the glycosidic hydroxy group of a cyclic form of a monosaccharide (or derivative) by a ceramide group." [] -subset: 3_STAR -synonym: "glycosylceramides" RELATED [ChEBI] +subset: 3:STAR +synonym: "glycosylceramides" RELATED [chebi] is_a: CHEBI:17761 ! ceramide is_a: CHEBI:24402 ! glycosphingolipid @@ -12121,143 +12627,143 @@ is_a: CHEBI:24402 ! glycosphingolipid id: CHEBI:63161 name: glycosyl compound def: "A carbohydrate derivative arising formally from the elimination of water from a glycosidic hydroxy group and an H atom bound to an oxygen, carbon, nitrogen or sulfur atom of a separate entity." [] -subset: 3_STAR -synonym: "glycosyl compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "glycosyl compounds" RELATED [chebi] is_a: CHEBI:63299 ! carbohydrate derivative [Term] id: CHEBI:63248 name: oxidising agent def: "A substance that removes electrons from another reactant in a redox reaction." [] -subset: 3_STAR -synonym: "oxidant" RELATED [ChEBI] -synonym: "oxidants" RELATED [ChEBI] -synonym: "oxidiser" RELATED [ChEBI] -synonym: "oxidisers" RELATED [ChEBI] -synonym: "oxidising agents" RELATED [ChEBI] -synonym: "oxidizer" RELATED [ChEBI] -synonym: "oxidizers" RELATED [ChEBI] -synonym: "oxidizing agent" RELATED [ChEBI] -synonym: "oxidizing agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "oxidant" RELATED [chebi] +synonym: "oxidants" RELATED [chebi] +synonym: "oxidiser" RELATED [chebi] +synonym: "oxidisers" RELATED [chebi] +synonym: "oxidising agents" RELATED [chebi] +synonym: "oxidizer" RELATED [chebi] +synonym: "oxidizers" RELATED [chebi] +synonym: "oxidizing agent" RELATED [chebi] +synonym: "oxidizing agents" RELATED [chebi] is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:63299 name: carbohydrate derivative def: "Any organooxygen compound derived from a carbohydrate by replacement of one or more hydroxy group(s) by an amino group, a thiol group or similar heteroatomic groups. The term also includes derivatives of these compounds." [] -subset: 3_STAR -synonym: "carbohydrate derivatives" RELATED [ChEBI] -synonym: "derivatised carbohydrate" RELATED [ChEBI] -synonym: "derivatised carbohydrates" RELATED [ChEBI] -synonym: "derivatized carbohydrate" RELATED [ChEBI] -synonym: "derivatized carbohydrates" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate derivatives" RELATED [chebi] +synonym: "derivatised carbohydrate" RELATED [chebi] +synonym: "derivatised carbohydrates" RELATED [chebi] +synonym: "derivatized carbohydrate" RELATED [chebi] +synonym: "derivatized carbohydrates" RELATED [chebi] is_a: CHEBI:78616 ! carbohydrates and carbohydrate derivatives -relationship: has_functional_parent CHEBI:16646 ! carbohydrate +relationship: RO:0018038 CHEBI:16646 ! has functional parent carbohydrate [Term] id: CHEBI:63332 name: EC 3.1.3.1 (alkaline phosphatase) inhibitor def: "An EC 3.1.3.* (phosphoric monoester hydrolase) inhibitor that interferes with the action of alkaline phosphatase (EC 3.1.3.1)." [] -subset: 3_STAR -synonym: "alkaline phenyl phosphatase inhibitor" RELATED [ChEBI] -synonym: "alkaline phenyl phosphatase inhibitors" RELATED [ChEBI] -synonym: "alkaline phosphatase (EC 3.1.3.1) inhibitor" RELATED [ChEBI] -synonym: "alkaline phosphatase (EC 3.1.3.1) inhibitors" RELATED [ChEBI] -synonym: "alkaline phosphatase inhibitor" RELATED [ChEBI] -synonym: "alkaline phosphatase inhibitors" RELATED [ChEBI] -synonym: "alkaline phosphohydrolase inhibitor" RELATED [ChEBI] -synonym: "alkaline phosphohydrolase inhibitors" RELATED [ChEBI] -synonym: "alkaline phosphomonoesterase inhibitor" RELATED [ChEBI] -synonym: "alkaline phosphomonoesterase inhibitors" RELATED [ChEBI] -synonym: "EC 3.1.3.1 (alkaline phosphatase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.1.3.1 inhibitor" RELATED [ChEBI] -synonym: "EC 3.1.3.1 inhibitors" RELATED [ChEBI] -synonym: "glycerophosphatase inhibitor" RELATED [ChEBI] -synonym: "glycerophosphatase inhibitors" RELATED [ChEBI] -synonym: "orthophosphoric-monoester phosphohydrolase (alkaline optimum) inhibitor" RELATED [ChEBI] -synonym: "orthophosphoric-monoester phosphohydrolase (alkaline optimum) inhibitors" RELATED [ChEBI] -synonym: "phosphate-monoester phosphohydrolase (alkaline optimum) inhibitor" RELATED [ChEBI] -synonym: "phosphate-monoester phosphohydrolase (alkaline optimum) inhibitors" RELATED [ChEBI] -synonym: "phosphomonoesterase inhibitor" RELATED [ChEBI] -synonym: "phosphomonoesterase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Alkaline_phosphatase +subset: 3:STAR +synonym: "alkaline phenyl phosphatase inhibitor" RELATED [chebi] +synonym: "alkaline phenyl phosphatase inhibitors" RELATED [chebi] +synonym: "alkaline phosphatase (EC 3.1.3.1) inhibitor" RELATED [chebi] +synonym: "alkaline phosphatase (EC 3.1.3.1) inhibitors" RELATED [chebi] +synonym: "alkaline phosphatase inhibitor" RELATED [chebi] +synonym: "alkaline phosphatase inhibitors" RELATED [chebi] +synonym: "alkaline phosphohydrolase inhibitor" RELATED [chebi] +synonym: "alkaline phosphohydrolase inhibitors" RELATED [chebi] +synonym: "alkaline phosphomonoesterase inhibitor" RELATED [chebi] +synonym: "alkaline phosphomonoesterase inhibitors" RELATED [chebi] +synonym: "EC 3.1.3.1 (alkaline phosphatase) inhibitors" RELATED [chebi] +synonym: "EC 3.1.3.1 inhibitor" RELATED [chebi] +synonym: "EC 3.1.3.1 inhibitors" RELATED [chebi] +synonym: "glycerophosphatase inhibitor" RELATED [chebi] +synonym: "glycerophosphatase inhibitors" RELATED [chebi] +synonym: "orthophosphoric-monoester phosphohydrolase (alkaline optimum) inhibitor" RELATED [chebi] +synonym: "orthophosphoric-monoester phosphohydrolase (alkaline optimum) inhibitors" RELATED [chebi] +synonym: "phosphate-monoester phosphohydrolase (alkaline optimum) inhibitor" RELATED [chebi] +synonym: "phosphate-monoester phosphohydrolase (alkaline optimum) inhibitors" RELATED [chebi] +synonym: "phosphomonoesterase inhibitor" RELATED [chebi] +synonym: "phosphomonoesterase inhibitors" RELATED [chebi] +xref: wikipedia.en:Alkaline_phosphatase {source="wikipedia.en"} is_a: CHEBI:76775 ! EC 3.1.3.* (phosphoric monoester hydrolase) inhibitor [Term] id: CHEBI:63367 name: monosaccharide derivative def: "A carbohydrate derivative that is formally obtained from a monosaccharide." [] -subset: 3_STAR -synonym: "monosaccharide derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "monosaccharide derivatives" RELATED [chebi] is_a: CHEBI:63299 ! carbohydrate derivative -relationship: has_functional_parent CHEBI:35381 ! monosaccharide +relationship: RO:0018038 CHEBI:35381 ! has functional parent monosaccharide [Term] id: CHEBI:63409 name: pentose derivative def: "A monosaccharide derivative that is formally obtained from a pentose." [] -subset: 3_STAR -synonym: "pentose derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "pentose derivatives" RELATED [chebi] is_a: CHEBI:63367 ! monosaccharide derivative -relationship: has_functional_parent CHEBI:25901 ! pentose +relationship: RO:0018038 CHEBI:25901 ! has functional parent pentose [Term] id: CHEBI:63436 name: carbohydrate acid derivative def: "A carbohydrate derivative that is formally obtained from a carbohydrate acid." [] -subset: 3_STAR -synonym: "carbohydrate acid derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate acid derivatives" RELATED [chebi] is_a: CHEBI:63299 ! carbohydrate derivative -relationship: has_functional_parent CHEBI:33720 ! carbohydrate acid -relationship: is_conjugate_acid_of CHEBI:63551 ! carbohydrate acid derivative anion +relationship: RO:0018034 CHEBI:63551 ! is protonated form of carbohydrate acid derivative anion +relationship: RO:0018038 CHEBI:33720 ! has functional parent carbohydrate acid [Term] id: CHEBI:63473 name: aromatic amino-acid anion -def: "An aromatic amino acid whose alpha-carboxylic acid group is ionized (non-protonated)." [] -subset: 3_STAR -synonym: "aromatic amino-acid anions" RELATED [ChEBI] +def: "An aromatic amino acid whose α-carboxylic acid group is ionized (non-protonated)." [] +subset: 3:STAR +synonym: "aromatic amino-acid anions" RELATED [chebi] is_a: CHEBI:37022 ! amino-acid anion -relationship: is_conjugate_base_of CHEBI:33856 ! aromatic amino acid +relationship: RO:0018033 CHEBI:33856 ! is deprotonated form of aromatic amino acid [Term] id: CHEBI:63534 name: monoamine def: "An aralylamino compound which contains one amino group connected to an aromatic ring by a two-carbon chain. Monoamines are derived from aromatic amino acids like phenylalanine, tyrosine, tryptophan, and the thyroid hormones by the action of aromatic amino acid decarboxylase enzymes." [] -subset: 3_STAR -synonym: "monoamines" RELATED [ChEBI] -synonym: "naturally occurring monoamine" RELATED [ChEBI] -synonym: "naturally occurring monoamines" RELATED [ChEBI] -xref: PMID:21822758 {source="Europe PMC"} -xref: PMID:21993877 {source="Europe PMC"} -xref: PMID:22005599 {source="Europe PMC"} -xref: PMID:22082101 {source="Europe PMC"} -xref: PMID:22153577 {source="Europe PMC"} -xref: PMID:22213370 {source="Europe PMC"} -xref: PMID:22218931 {source="Europe PMC"} -xref: PMID:22342987 {source="Europe PMC"} -xref: PMID:22371656 {source="Europe PMC"} +subset: 3:STAR +synonym: "monoamines" RELATED [chebi] +synonym: "naturally occurring monoamine" RELATED [chebi] +synonym: "naturally occurring monoamines" RELATED [chebi] +xref: pubmed:21822758 {source="pubmed"} +xref: pubmed:21993877 {source="pubmed"} +xref: pubmed:22005599 {source="pubmed"} +xref: pubmed:22082101 {source="pubmed"} +xref: pubmed:22153577 {source="pubmed"} +xref: pubmed:22213370 {source="pubmed"} +xref: pubmed:22218931 {source="pubmed"} +xref: pubmed:22342987 {source="pubmed"} +xref: pubmed:22371656 {source="pubmed"} is_a: CHEBI:64365 ! aralkylamino compound [Term] id: CHEBI:63551 name: carbohydrate acid derivative anion def: "A carboxylic acid anion resulting from the deprotonation of the carboxy group of a carbohydrate acid derivative." [] -subset: 3_STAR -synonym: "carbohydrate acid anion derivative" RELATED [ChEBI] -synonym: "carbohydrate acid anion derivatives" RELATED [ChEBI] -synonym: "carbohydrate acid derivative anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "carbohydrate acid anion derivative" RELATED [chebi] +synonym: "carbohydrate acid anion derivatives" RELATED [chebi] +synonym: "carbohydrate acid derivative anions" RELATED [chebi] is_a: CHEBI:29067 ! carboxylic acid anion -relationship: has_functional_parent CHEBI:33721 ! carbohydrate acid anion -relationship: is_conjugate_base_of CHEBI:63436 ! carbohydrate acid derivative +relationship: RO:0018033 CHEBI:63436 ! is deprotonated form of carbohydrate acid derivative +relationship: RO:0018038 CHEBI:33721 ! has functional parent carbohydrate acid anion [Term] id: CHEBI:64047 name: food additive def: "Any substance which is added to food to preserve or enhance its flavour and/or appearance." [] -subset: 3_STAR -synonym: "food additives" RELATED [ChEBI] -xref: Wikipedia:Food_additive +subset: 3:STAR +synonym: "food additives" RELATED [chebi] +xref: wikipedia.en:Food_additive {source="wikipedia.en"} is_a: CHEBI:33232 ! application is_a: CHEBI:78295 ! food component @@ -12265,57 +12771,57 @@ is_a: CHEBI:78295 ! food component id: CHEBI:64049 name: food acidity regulator def: "A food additive that is used to change or otherwise control the acidity or alkalinity of foods. They may be acids, bases, neutralising agents or buffering agents." [] -subset: 3_STAR -synonym: "acidity regulator" RELATED [ChEBI] -synonym: "acidity regulators" RELATED [ChEBI] -synonym: "food acidity regulators" RELATED [ChEBI] -synonym: "pH control agent" RELATED [ChEBI] -synonym: "pH control agents" RELATED [ChEBI] -xref: Wikipedia:Acidity_regulator +subset: 3:STAR +synonym: "acidity regulator" RELATED [chebi] +synonym: "acidity regulators" RELATED [chebi] +synonym: "food acidity regulators" RELATED [chebi] +synonym: "pH control agent" RELATED [chebi] +synonym: "pH control agents" RELATED [chebi] +xref: wikipedia.en:Acidity_regulator {source="wikipedia.en"} is_a: CHEBI:64047 ! food additive [Term] id: CHEBI:64365 name: aralkylamino compound def: "An organic amino compound in which an aminoalkyl group is linked to an arene." [] -subset: 3_STAR -synonym: "aralkylamino compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "aralkylamino compounds" RELATED [chebi] is_a: CHEBI:50047 ! organic amino compound [Term] id: CHEBI:64416 name: EC 1.3.1.43 (arogenate dehydrogenase) inhibitor -def: "An EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor, NAD(+) or NADP(+) as acceptor) inhibitor that interferes with the action of arogenate dehydrogenase (EC 1.3.1.43)." [] -subset: 3_STAR -synonym: "arogenate dehydrogenase (EC 1.3.1.43) inhibitor" RELATED [ChEBI] -synonym: "arogenate dehydrogenase (EC 1.3.1.43) inhibitors" RELATED [ChEBI] -synonym: "arogenate dehydrogenase inhibitor" RELATED [ChEBI] -synonym: "arogenate dehydrogenase inhibitors" RELATED [ChEBI] -synonym: "cyclohexadienyl dehydrogenase inhibitor" RELATED [ChEBI] -synonym: "cyclohexadienyl dehydrogenase inhibitors" RELATED [ChEBI] -synonym: "EC 1.3.1.43 (arogenate dehydrogenase) inhibitors" RELATED [ChEBI] -synonym: "EC 1.3.1.43 inhibitor" RELATED [ChEBI] -synonym: "EC 1.3.1.43 inhibitors" RELATED [ChEBI] -synonym: "L-arogenate:NAD(+) oxidoreductase (decarboxylating) inhibitor" RELATED [ChEBI] -synonym: "L-arogenate:NAD(+) oxidoreductase (decarboxylating) inhibitors" RELATED [ChEBI] -synonym: "L-arogenate:NAD+ oxidoreductase (decarboxylating) inhibitor" RELATED [ChEBI] -synonym: "L-arogenate:NAD+ oxidoreductase (decarboxylating) inhibitors" RELATED [ChEBI] -synonym: "L-arogenate:NAD+ oxidoreductase inhibitor" RELATED [ChEBI] -synonym: "L-arogenate:NAD+ oxidoreductase inhibitors" RELATED [ChEBI] -synonym: "TyrA(a) inhibitor" RELATED [ChEBI] -synonym: "TyrA(a) inhibitors" RELATED [ChEBI] -xref: Wikipedia:Arogenate_dehydrogenase +def: "An EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor, NAD+ or NADP+ as acceptor) inhibitor that interferes with the action of arogenate dehydrogenase (EC 1.3.1.43)." [] +subset: 3:STAR +synonym: "arogenate dehydrogenase (EC 1.3.1.43) inhibitor" RELATED [chebi] +synonym: "arogenate dehydrogenase (EC 1.3.1.43) inhibitors" RELATED [chebi] +synonym: "arogenate dehydrogenase inhibitor" RELATED [chebi] +synonym: "arogenate dehydrogenase inhibitors" RELATED [chebi] +synonym: "cyclohexadienyl dehydrogenase inhibitor" RELATED [chebi] +synonym: "cyclohexadienyl dehydrogenase inhibitors" RELATED [chebi] +synonym: "EC 1.3.1.43 (arogenate dehydrogenase) inhibitors" RELATED [chebi] +synonym: "EC 1.3.1.43 inhibitor" RELATED [chebi] +synonym: "EC 1.3.1.43 inhibitors" RELATED [chebi] +synonym: "L-arogenate:NAD(+) oxidoreductase (decarboxylating) inhibitor" RELATED [chebi] +synonym: "L-arogenate:NAD(+) oxidoreductase (decarboxylating) inhibitors" RELATED [chebi] +synonym: "L-arogenate:NAD+ oxidoreductase (decarboxylating) inhibitor" RELATED [chebi] +synonym: "L-arogenate:NAD+ oxidoreductase (decarboxylating) inhibitors" RELATED [chebi] +synonym: "L-arogenate:NAD+ oxidoreductase inhibitor" RELATED [chebi] +synonym: "L-arogenate:NAD+ oxidoreductase inhibitors" RELATED [chebi] +synonym: "TyrA(a) inhibitor" RELATED [chebi] +synonym: "TyrA(a) inhibitors" RELATED [chebi] +xref: wikipedia.en:Arogenate_dehydrogenase {source="wikipedia.en"} is_a: CHEBI:76857 ! EC 1.3.1.* (oxidoreductase acting on donor CH-CH group, NAD(+) or NADP(+) as acceptor) inhibitor [Term] id: CHEBI:64583 name: sphingomyelin def: "Any of a class of phospholipids in which the amino group of a sphingoid base is in amide linkage with one of several fatty acids, while the terminal hydroxy group of the sphingoid base is esterified to phosphorylcholine." [] -subset: 3_STAR -synonym: "an N-(acyl)-sphingosylphosphocholine" RELATED [UniProt] -synonym: "Ceramide phosphocholine" RELATED [LIPID_MAPS] -xref: LIPID_MAPS_class:LMSP0301 {source="LIPID MAPS"} -xref: PMID:27242221 {source="Europe PMC"} +subset: 3:STAR +synonym: "an N-(acyl)-sphingosylphosphocholine" RELATED [uniprot_ft] +synonym: "Ceramide phosphocholine" RELATED [lipidmaps] +xref: lipidmaps_class:LMSP0301 {source="lipidmaps_class"} +xref: pubmed:27242221 {source="pubmed"} is_a: CHEBI:140325 ! secondary carboxamide is_a: CHEBI:35284 ! ammonium betaine is_a: CHEBI:35786 ! phosphosphingolipid @@ -12325,8 +12831,8 @@ is_a: CHEBI:36700 ! phosphocholines id: CHEBI:64600 name: C21-steroid hormone def: "A steroid compound with a structure based on a 21-carbon (pregnane) skeleton that acts as a hormone." [] -subset: 3_STAR -synonym: "C21-steroid hormones" RELATED [ChEBI] +subset: 3:STAR +synonym: "C21-steroid hormones" RELATED [chebi] is_a: CHEBI:26764 ! steroid hormone is_a: CHEBI:61313 ! C21-steroid @@ -12334,31 +12840,32 @@ is_a: CHEBI:61313 ! C21-steroid id: CHEBI:64628 name: somatostatin def: "A fourteen-membered heterodetic cyclic peptide comprising the sequence Ala-Gly-Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys cyclised by a disulfide bridge between the two Cys residues at positions 3 and 14." [] -subset: 3_STAR -synonym: "Ala-Gly-cyclo-[Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys]" RELATED [ChEBI] -synonym: "L-alanyl-N-[(4R,7S,10S,13S,16S,19S,22S,25S,28S,31S,34S,37R)-19,34-bis(4-aminobutyl)-31-(2-amino-2-oxoethyl)-13,25,28-tribenzyl-4-carboxy-10,16-bis[(1R)-1-hydroxyethyl]-7-(hydroxymethyl)-22-(1H-indol-3-ylmethyl)-6,9,12,15,18,21,24,27,30,33,36-undecaoxo-1,2-dithia-5,8,11,14,17,20,23,26,29,32,35-undecaazacyclooctatriacontan-37-yl]glycinamide" EXACT IUPAC_NAME [IUPAC] -synonym: "L-alanylglycyl-L-cysteinyl-L-lysyl-L-asparaginyl-L-phenylalanyl-L-phenylalanyl-L-tryptophyl-L-lysyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-cysteine cyclic (3-14) disulfide" RELATED [ChemIDplus] -synonym: "somatostatin" RELATED INN [KEGG_DRUG] -synonym: "Somatostatin-1" RELATED [KEGG_COMPOUND] -synonym: "Somatostatin-14" RELATED [KEGG_COMPOUND] -synonym: "somatostatina" RELATED INN [ChemIDplus] -synonym: "somatostatine" RELATED INN [ChemIDplus] -synonym: "somatostatinum" RELATED INN [ChemIDplus] -synonym: "Synthetic growth hormone release-inhibiting hormone" RELATED [ChemIDplus] -xref: CAS:38916-34-6 {source="ChemIDplus", source="KEGG DRUG"} -xref: Drug_Central:2997 {source="DrugCentral"} -xref: HMDB:HMDB0013072 -xref: KEGG:C16022 -xref: KEGG:D07431 -xref: LINCS:LSM-5326 -xref: PMID:21922516 {source="Europe PMC"} -xref: PMID:22129035 {source="Europe PMC"} -xref: PMID:22147011 {source="Europe PMC"} -xref: PMID:22251942 {source="Europe PMC"} -xref: PMID:22483686 {source="Europe PMC"} -xref: PMID:22509294 {source="Europe PMC"} -xref: Reaxys:10148626 {source="Reaxys"} -xref: Wikipedia:Somatostatin +subset: 3:STAR +synonym: "Ala-Gly-cyclo-[Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys]" RELATED [chebi] +synonym: "L-alanyl-N-[(4R,7S,10S,13S,16S,19S,22S,25S,28S,31S,34S,37R)-19,34-bis(4-aminobutyl)-31-(2-amino-2-oxoethyl)-13,25,28-tribenzyl-4-carboxy-10,16-bis[(1R)-1-hydroxyethyl]-7-(hydroxymethyl)-22-(1H-indol-3-ylmethyl)-6,9,12,15,18,21,24,27,30,33,36-undecaoxo-1,2-dithia-5,8,11,14,17,20,23,26,29,32,35-undecaazacyclooctatriacontan-37-yl]glycinamide" EXACT IUPAC:NAME [IUPAC] +synonym: "L-alanyl-N-[(4R,7S,10S,13S,16S,19S,22S,25S,28S,31S,34S,37R)-19,34-bis(4-aminobutyl)-31-(2-amino-2-oxoethyl)-13,25,28-tribenzyl-4-carboxy-10,16-bis[(1R)-1-hydroxyethyl]-7-(hydroxymethyl)-22-(1H-indol-3-ylmethyl)-6,9,12,15,18,21,24,27,30,33,36-undecaoxo-1,2-dithia-5,8,11,14,17,20,23,26,29,32,35-undecaazacyclooctatriacontan-37-yl]glycinamide" RELATED IUPAC:NAME [iupac] +synonym: "L-alanylglycyl-L-cysteinyl-L-lysyl-L-asparaginyl-L-phenylalanyl-L-phenylalanyl-L-tryptophyl-L-lysyl-L-threonyl-L-phenylalanyl-L-threonyl-L-seryl-L-cysteine cyclic (3-14) disulfide" RELATED [chemidplus] +synonym: "somatostatin" RELATED http://purl.obolibrary.org/obo/chebi/INN [kegg.drug] +synonym: "Somatostatin-1" RELATED [kegg.compound] +synonym: "Somatostatin-14" RELATED [kegg.compound] +synonym: "somatostatina" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "somatostatine" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "somatostatinum" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Synthetic growth hormone release-inhibiting hormone" RELATED [chemidplus] +xref: cas:38916-34-6 {source="cas"} +xref: drugcentral:2997 {source="drugcentral"} +xref: hmdb:HMDB0013072 {source="hmdb"} +xref: kegg.compound:C16022 {source="kegg.compound"} +xref: kegg.drug:D07431 {source="kegg.drug"} +xref: lincs.smallmolecule:LSM-5326 {source="lincs.smallmolecule"} +xref: pubmed:21922516 {source="pubmed"} +xref: pubmed:22129035 {source="pubmed"} +xref: pubmed:22147011 {source="pubmed"} +xref: pubmed:22251942 {source="pubmed"} +xref: pubmed:22483686 {source="pubmed"} +xref: pubmed:22509294 {source="pubmed"} +xref: reaxys:10148626 {source="reaxys"} +xref: wikipedia.en:Somatostatin {source="wikipedia.en"} is_a: CHEBI:24533 ! heterodetic cyclic peptide is_a: CHEBI:25905 ! peptide hormone @@ -12366,99 +12873,100 @@ is_a: CHEBI:25905 ! peptide hormone id: CHEBI:64641 name: divalent inorganic cation def: "An inorganic cation with a valency of two." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:36915 ! inorganic cation [Term] id: CHEBI:64708 name: one-carbon compound -def: "An organic molecular entity containing a single carbon atom (C1)." [] -subset: 3_STAR -synonym: "one-carbon compounds" RELATED [ChEBI] +def: "An organic molecular entity containing a single carbon atom (C1)." [] +subset: 3:STAR +synonym: "one-carbon compounds" RELATED [chebi] is_a: CHEBI:50860 ! organic molecular entity [Term] id: CHEBI:64709 name: organic acid def: "Any organic molecular entity that is acidic and contains carbon in covalent linkage." [] -subset: 3_STAR -synonym: "organic acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic acids" RELATED [chebi] is_a: CHEBI:50860 ! organic molecular entity [Term] id: CHEBI:64766 name: cationic group def: "A group that carries an overall positive charge." [] -subset: 3_STAR -synonym: "cationic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "cationic groups" RELATED [chebi] is_a: CHEBI:24433 ! group [Term] id: CHEBI:64767 name: anionic group def: "A group that carries an overall negative charge." [] -subset: 3_STAR -synonym: "anionic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "anionic groups" RELATED [chebi] is_a: CHEBI:24433 ! group [Term] id: CHEBI:64769 name: organic cationic group def: "A cationic group that contains carbon." [] -subset: 3_STAR -synonym: "organic cationic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic cationic groups" RELATED [chebi] is_a: CHEBI:64766 ! cationic group -relationship: is_conjugate_acid_of CHEBI:33247 ! organic group +relationship: RO:0018034 CHEBI:33247 ! is protonated form of organic group [Term] id: CHEBI:64775 name: organic anionic group def: "An anionic group that contains carbon." [] -subset: 3_STAR -synonym: "organic anionic groups" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic anionic groups" RELATED [chebi] is_a: CHEBI:64767 ! anionic group -relationship: is_conjugate_base_of CHEBI:33247 ! organic group +relationship: RO:0018033 CHEBI:33247 ! is deprotonated form of organic group [Term] id: CHEBI:64898 name: anionic amino-acid residue def: "An amino-acid residue carrying an overall negative charge." [] -subset: 3_STAR -synonym: "amino acid anion residue" RELATED [ChEBI] -synonym: "amino acid anion residues" RELATED [ChEBI] -synonym: "amino-acid anion residue" RELATED [ChEBI] -synonym: "amino-acid anion residues" RELATED [ChEBI] -synonym: "anionic amino acid residue" RELATED [ChEBI] -synonym: "anionic amino acid residues" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino acid anion residue" RELATED [chebi] +synonym: "amino acid anion residues" RELATED [chebi] +synonym: "amino-acid anion residue" RELATED [chebi] +synonym: "amino-acid anion residues" RELATED [chebi] +synonym: "anionic amino acid residue" RELATED [chebi] +synonym: "anionic amino acid residues" RELATED [chebi] is_a: CHEBI:64775 ! organic anionic group -relationship: is_conjugate_base_of CHEBI:33708 ! amino-acid residue +relationship: RO:0018033 CHEBI:33708 ! is deprotonated form of amino-acid residue [Term] id: CHEBI:64909 name: poison def: "Any substance that causes disturbance to organisms by chemical reaction or other activity on the molecular scale, when a sufficient quantity is absorbed by the organism." [] -subset: 3_STAR -synonym: "poisonous agent" RELATED [ChEBI] -synonym: "poisonous agents" RELATED [ChEBI] -synonym: "poisonous substance" RELATED [ChEBI] -synonym: "poisonous substances" RELATED [ChEBI] -synonym: "poisons" RELATED [ChEBI] -synonym: "toxic agent" RELATED [ChEBI] -synonym: "toxic agents" RELATED [ChEBI] -synonym: "toxic substance" RELATED [ChEBI] -synonym: "toxic substances" RELATED [ChEBI] -xref: Wikipedia:Poison +subset: 3:STAR +synonym: "poisonous agent" RELATED [chebi] +synonym: "poisonous agents" RELATED [chebi] +synonym: "poisonous substance" RELATED [chebi] +synonym: "poisonous substances" RELATED [chebi] +synonym: "poisons" RELATED [chebi] +synonym: "toxic agent" RELATED [chebi] +synonym: "toxic agents" RELATED [chebi] +synonym: "toxic substance" RELATED [chebi] +synonym: "toxic substances" RELATED [chebi] +xref: wikipedia.en:Poison {source="wikipedia.en"} is_a: CHEBI:24432 ! biological role [Term] id: CHEBI:6495 name: lipoprotein def: "A clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids." [] -subset: 3_STAR -synonym: "Lipoprotein" EXACT [KEGG_COMPOUND] -synonym: "lipoprotein particle" RELATED [ChEBI] -synonym: "lipoproteins" EXACT IUPAC_NAME [IUPAC] -xref: KEGG:C01834 +subset: 3:STAR +synonym: "Lipoprotein" RELATED [kegg.compound] +synonym: "lipoprotein particle" RELATED [chebi] +synonym: "lipoproteins" EXACT IUPAC:NAME [IUPAC] +synonym: "lipoproteins" RELATED IUPAC:NAME [iupac] +xref: kegg.compound:C01834 {source="kegg.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:33837 ! conjugated protein is_a: CHEBI:39024 ! clathrate compound @@ -12469,29 +12977,29 @@ relationship: RO:0000087 CHEBI:76971 ! has role Escherichia coli metabolite id: CHEBI:65212 name: polysaccharide derivative def: "A carbohydrate derivative that is any derivative of a polysaccharide." [] -subset: 3_STAR -synonym: "polysaccharide derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "polysaccharide derivatives" RELATED [chebi] is_a: CHEBI:167559 ! glycan is_a: CHEBI:33694 ! biomacromolecule is_a: CHEBI:63299 ! carbohydrate derivative -relationship: has_functional_parent CHEBI:18154 ! polysaccharide +relationship: RO:0018038 CHEBI:18154 ! has functional parent polysaccharide [Term] id: CHEBI:65255 name: food preservative def: "Substances which are added to food in order to prevent decomposition caused by microbial growth or by undesirable chemical changes." [] -subset: 3_STAR -synonym: "food preservatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "food preservatives" RELATED [chebi] is_a: CHEBI:64047 ! food additive [Term] id: CHEBI:65256 name: antimicrobial food preservative def: "A food preservative which prevents decomposition of food by preventing the growth of fungi or bacteria. In European countries, E-numbers for permitted food preservatives are from E200 to E299, divided into sorbates (E200-209), benzoates (E210-219), sulfites (E220-229), phenols and formates (E230-239), nitrates (E240-259), acetates (E260-269), lactates (E270-279), propionates (E280-289) and others (E290-299)." [] -subset: 3_STAR -synonym: "antimicrobial food preservatives" RELATED [ChEBI] -synonym: "antimicrobial preservative" RELATED [ChEBI] -synonym: "antimicrobial preservatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "antimicrobial food preservatives" RELATED [chebi] +synonym: "antimicrobial preservative" RELATED [chebi] +synonym: "antimicrobial preservatives" RELATED [chebi] is_a: CHEBI:33281 ! antimicrobial agent is_a: CHEBI:65255 ! food preservative @@ -12499,9 +13007,9 @@ is_a: CHEBI:65255 ! food preservative id: CHEBI:65265 name: antacid def: "Any substance which is used to neutralise stomach acidity." [] -subset: 3_STAR -synonym: "antacids" RELATED [ChEBI] -xref: Wikipedia:Antacid +subset: 3:STAR +synonym: "antacids" RELATED [chebi] +xref: wikipedia.en:Antacid {source="wikipedia.en"} is_a: CHEBI:23888 ! drug is_a: CHEBI:52210 ! pharmacological role @@ -12509,38 +13017,38 @@ is_a: CHEBI:52210 ! pharmacological role id: CHEBI:65296 name: primary ammonium ion def: "An ammonium ion derivative resulting from the protonation of the nitrogen atom of a primary amino compound. Major species at pH 7.3." [] -subset: 3_STAR -synonym: "a primary amine" RELATED [UniProt] -synonym: "substituted ammonium" RELATED [ChEBI] +subset: 3:STAR +synonym: "a primary amine" RELATED [uniprot_ft] +synonym: "substituted ammonium" RELATED [chebi] is_a: CHEBI:25697 ! organic cation is_a: CHEBI:35274 ! ammonium ion derivative -relationship: is_conjugate_acid_of CHEBI:50994 ! primary amino compound +relationship: RO:0018034 CHEBI:50994 ! is protonated form of primary amino compound [Term] id: CHEBI:67079 name: anti-inflammatory agent def: "Any compound that has anti-inflammatory effects." [] -subset: 3_STAR -synonym: "anti-inflammatory agents" RELATED [ChEBI] -synonym: "antiinflammatory agent" RELATED [ChEBI] -synonym: "antiinflammatory agents" RELATED [ChEBI] +subset: 3:STAR +synonym: "anti-inflammatory agents" RELATED [chebi] +synonym: "antiinflammatory agent" RELATED [chebi] +synonym: "antiinflammatory agents" RELATED [chebi] is_a: CHEBI:33232 ! application [Term] id: CHEBI:67200 name: provitamin A def: "A provitamin that can be converted into vitamin A by enzymes from animal tissues." [] -subset: 3_STAR -synonym: "provitamin As" RELATED [ChEBI] +subset: 3:STAR +synonym: "provitamin As" RELATED [chebi] is_a: CHEBI:50188 ! provitamin [Term] id: CHEBI:68452 name: azole def: "Any monocyclic heteroarene consisting of a five-membered ring containing nitrogen. Azoles can also contain one or more other non-carbon atoms, such as nitrogen, sulfur or oxygen." [] -subset: 3_STAR -synonym: "azoles" RELATED [ChEBI] -xref: Wikipedia:Azole +subset: 3:STAR +synonym: "azoles" RELATED [chebi] +xref: wikipedia.en:Azole {source="wikipedia.en"} is_a: CHEBI:38101 ! organonitrogen heterocyclic compound is_a: CHEBI:38179 ! monocyclic heteroarene @@ -12548,62 +13056,65 @@ is_a: CHEBI:38179 ! monocyclic heteroarene id: CHEBI:70709 name: progesterone receptor agonist def: "A hormone agonist that binds to and activates progesterone receptors." [] -subset: 3_STAR -synonym: "PR agonist" RELATED [ChEBI] -synonym: "PR agonists" RELATED [ChEBI] -synonym: "progesterone receptor agonists" RELATED [ChEBI] +subset: 3:STAR +synonym: "PR agonist" RELATED [chebi] +synonym: "PR agonists" RELATED [chebi] +synonym: "progesterone receptor agonists" RELATED [chebi] is_a: CHEBI:51060 ! hormone agonist [Term] id: CHEBI:71406 name: (R)-adrenaline(1+) -def: "An organic cation that is the conjugate acid of (R)-adrenaline, obtained by protonation of the amino group; major species at pH 7.3." [] -subset: 3_STAR -synonym: "(2R)-2-(3,4-dihydroxyphenyl)-2-hydroxy-N-methylethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "(R)-adrenaline" RELATED [UniProt] -synonym: "(R)-adrenaline cation" RELATED [ChEBI] -synonym: "L-epinephrine cation" RELATED [ChEBI] -synonym: "L-epinephrine(1+)" RELATED [ChEBI] -xref: MetaCyc:L-EPINEPHRINE +def: "An organic cation that is the conjugate acid of (R)-adrenaline, obtained by protonation of the amino group; major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2R)-2-(3,4-dihydroxyphenyl)-2-hydroxy-N-methylethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-(3,4-dihydroxyphenyl)-2-hydroxy-N-methylethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "(R)-adrenaline" RELATED [uniprot_ft] +synonym: "(R)-adrenaline cation" RELATED [chebi] +synonym: "L-epinephrine cation" RELATED [chebi] +synonym: "L-epinephrine(1+)" RELATED [chebi] +xref: metacyc.compound:L-EPINEPHRINE {source="metacyc.compound"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:25697 ! organic cation is_a: CHEBI:35274 ! ammonium ion derivative -relationship: is_conjugate_acid_of CHEBI:28918 ! (R)-adrenaline relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:28918 ! is protonated form of (R)-adrenaline [Term] id: CHEBI:71666 name: gamma-amino acid anion -def: "An amino-acid anion in which the amino group is situated gamma- to the carboxylate group." [] -subset: 3_STAR -synonym: "gamma-amino acid anions" RELATED [ChEBI] +def: "An amino-acid anion in which the amino group is situated γ- to the carboxylate group." [] +subset: 3:STAR +synonym: "gamma-amino acid anions" RELATED [chebi] is_a: CHEBI:37022 ! amino-acid anion -relationship: is_conjugate_base_of CHEBI:33707 ! gamma-amino acid +relationship: RO:0018033 CHEBI:33707 ! is deprotonated form of gamma-amino acid [Term] id: CHEBI:72587 name: (R)-noradrenaline(1+) -def: "An organic cation that is the conjugate acid of (R)-noradrenaline, obtained by protonation of the priamry amino group; major species at pH 7.3." [] -subset: 3_STAR -synonym: "(2R)-2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" EXACT IUPAC_NAME [IUPAC] -synonym: "(R)-noradrenaline" RELATED [UniProt] -synonym: "(R)-noradrenaline cation" RELATED [ChEBI] -synonym: "(R)-noradrenalinium cation" RELATED [ChEBI] -synonym: "(R)-noradrenalinium(1+)" RELATED [ChEBI] -xref: PDBeChem:E5E +def: "An organic cation that is the conjugate acid of (R)-noradrenaline, obtained by protonation of the primary amino group; major species at pH 7.3." [] +subset: 3:STAR +synonym: "(2R)-2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-(3,4-dihydroxyphenyl)-2-hydroxyethanaminium" RELATED IUPAC:NAME [iupac] +synonym: "(R)-noradrenaline" RELATED [uniprot_ft] +synonym: "(R)-noradrenaline cation" RELATED [chebi] +synonym: "(R)-noradrenalinium cation" RELATED [chebi] +synonym: "(R)-noradrenalinium(1+)" RELATED [chebi] +xref: pdb-ccd:E5E {source="pdb-ccd"} is_a: BFO:0000004 ! independent continuant is_a: CHEBI:166902 ! noradrenaline(1+) -relationship: is_conjugate_acid_of CHEBI:18357 ! (R)-noradrenaline relationship: RO:0000087 CHEBI:77746 ! has role human metabolite +relationship: RO:0018034 CHEBI:18357 ! is protonated form of (R)-noradrenaline +relationship: RO:0018039 CHEBI:234420 ! is enantiomer of (S)-noradrenaline(1+) [Term] id: CHEBI:72695 name: organic molecule def: "Any molecule that consists of at least one carbon atom as part of the electrically neutral entity." [] -subset: 3_STAR -synonym: "organic compound" RELATED [ChEBI] -synonym: "organic compounds" RELATED [ChEBI] -synonym: "organic molecules" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic compound" RELATED [chebi] +synonym: "organic compounds" RELATED [chebi] +synonym: "organic molecules" RELATED [chebi] is_a: CHEBI:25367 ! molecule is_a: CHEBI:50860 ! organic molecular entity @@ -12611,177 +13122,181 @@ is_a: CHEBI:50860 ! organic molecular entity id: CHEBI:72813 name: exopolysaccharide def: "A biomacromolecule composed of carbohydrate residues which is secreted by a microorganism into the surrounding environment." [] -subset: 3_STAR -synonym: "exopolysaccharides" RELATED [ChEBI] -synonym: "extracellular polymeric substance" RELATED [ChEBI] -synonym: "extracellular polymeric substances" RELATED [ChEBI] -xref: MetaCyc:Exopolysaccharides -xref: PMID:11160795 {source="Europe PMC"} -xref: PMID:11785425 {source="Europe PMC"} -xref: PMID:1444258 {source="Europe PMC"} -xref: PMID:15738217 {source="Europe PMC"} -xref: PMID:16075348 {source="Europe PMC"} -xref: PMID:17440912 {source="Europe PMC"} -xref: PMID:18097339 {source="Europe PMC"} -xref: PMID:19453747 {source="Europe PMC"} -xref: PMID:20172021 {source="Europe PMC"} -xref: PMID:20631870 {source="Europe PMC"} -xref: PMID:20718297 {source="Europe PMC"} -xref: PMID:2688547 {source="Europe PMC"} -xref: PMID:6354590 {source="Europe PMC"} -xref: Wikipedia:Exopolysaccharide -xref: Wikipedia:Extracellular_polymeric_substance +subset: 3:STAR +synonym: "exopolysaccharides" RELATED [chebi] +synonym: "extracellular polymeric substance" RELATED [chebi] +synonym: "extracellular polymeric substances" RELATED [chebi] +xref: metacyc.compound:Exopolysaccharides {source="metacyc.compound"} +xref: pubmed:11160795 {source="pubmed"} +xref: pubmed:11785425 {source="pubmed"} +xref: pubmed:1444258 {source="pubmed"} +xref: pubmed:15738217 {source="pubmed"} +xref: pubmed:16075348 {source="pubmed"} +xref: pubmed:17440912 {source="pubmed"} +xref: pubmed:18097339 {source="pubmed"} +xref: pubmed:19453747 {source="pubmed"} +xref: pubmed:20172021 {source="pubmed"} +xref: pubmed:20631870 {source="pubmed"} +xref: pubmed:20718297 {source="pubmed"} +xref: pubmed:2688547 {source="pubmed"} +xref: pubmed:6354590 {source="pubmed"} +xref: wikipedia.en:Exopolysaccharide {source="wikipedia.en"} +xref: wikipedia.en:Extracellular_polymeric_substance {source="wikipedia.en"} is_a: CHEBI:33694 ! biomacromolecule [Term] id: CHEBI:73336 name: vulnerary def: "A drug used in treating and healing of wounds." [] -subset: 3_STAR -synonym: "vulneraries" RELATED [ChEBI] -synonym: "wound-healing agent" RELATED [ChEBI] -synonym: "wound-healing agents" RELATED [ChEBI] -synonym: "wound-healing drug" RELATED [ChEBI] -synonym: "wound-healing drugs" RELATED [ChEBI] -xref: Wikipedia:Wound_healing +subset: 3:STAR +synonym: "vulneraries" RELATED [chebi] +synonym: "wound-healing agent" RELATED [chebi] +synonym: "wound-healing agents" RELATED [chebi] +synonym: "wound-healing drug" RELATED [chebi] +synonym: "wound-healing drugs" RELATED [chebi] +xref: wikipedia.en:Wound_healing {source="wikipedia.en"} is_a: CHEBI:23888 ! drug [Term] id: CHEBI:73398 name: indole skeleton def: "A mancude heterobicyclic organic group consisting of a benzene ring fused to a pyrrole ring." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:73541 ! organic heterobicyclic ring [Term] id: CHEBI:73541 name: organic heterobicyclic ring def: "A bicyclic organic group that contains both carbon and hetero atoms." [] -subset: 3_STAR -synonym: "organic heterobicyclic rings" RELATED [ChEBI] +subset: 3:STAR +synonym: "organic heterobicyclic rings" RELATED [chebi] is_a: CHEBI:52845 ! cyclic organic group [Term] id: CHEBI:73690 name: erythrose 4-phosphate/phosphoenolpyruvate family amino acid -def: "An L-alpha-amino acid which is biosynthesised from erythrose 4-phosphate and phosphoenolpyruvate (i.e. phenylalanine, tyrosine, and tryptophan). A closed class." [] -subset: 3_STAR -synonym: "erythrose 4-phosphate and phosphoenolpyruvate family amino acid" RELATED [ChEBI] -synonym: "erythrose 4-phosphate and phosphoenolpyruvate family amino acids" RELATED [ChEBI] -synonym: "erythrose 4-phosphate family amino acid" RELATED [ChEBI] -synonym: "erythrose 4-phosphate family amino acids" RELATED [ChEBI] -synonym: "erythrose 4-phosphate/phosphoenolpyruvate family amino acids" RELATED [ChEBI] -synonym: "phosphoenolpyruvate family amino acid" RELATED [ChEBI] -synonym: "phosphoenolpyruvate family amino acids" RELATED [ChEBI] +def: "An L-α-amino acid which is biosynthesised from erythrose 4-phosphate and phosphoenolpyruvate (i.e. phenylalanine, tyrosine, and tryptophan). A closed class." [] +subset: 3:STAR +synonym: "erythrose 4-phosphate and phosphoenolpyruvate family amino acid" RELATED [chebi] +synonym: "erythrose 4-phosphate and phosphoenolpyruvate family amino acids" RELATED [chebi] +synonym: "erythrose 4-phosphate family amino acid" RELATED [chebi] +synonym: "erythrose 4-phosphate family amino acids" RELATED [chebi] +synonym: "erythrose 4-phosphate/phosphoenolpyruvate family amino acids" RELATED [chebi] +synonym: "phosphoenolpyruvate family amino acid" RELATED [chebi] +synonym: "phosphoenolpyruvate family amino acids" RELATED [chebi] is_a: CHEBI:15705 ! L-alpha-amino acid is_a: CHEBI:83813 ! proteinogenic amino acid [Term] id: CHEBI:74656 name: O(4)-phosphonato-D-tyrosine(2-) -def: "An optically active form of O(4)-phosphonatotyrosine(2-) having D-configuration." [] -subset: 3_STAR -synonym: "(2R)-2-ammonio-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED [IUPAC] -synonym: "(2R)-2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "O(4)-phospho-D-tyrosine(2-)" RELATED [ChEBI] -synonym: "O-phospho-D-tyrosine(2-)" RELATED [SUBMITTER] -xref: MetaCyc:CPD-3729 {source="SUBMITTER"} +def: "An optically active form of O4-phosphonatotyrosine(2−) having D-configuration." [] +subset: 3:STAR +synonym: "(2R)-2-ammonio-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED [iupac] +synonym: "(2R)-2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "(2R)-2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED IUPAC:NAME [iupac] +synonym: "O(4)-phospho-D-tyrosine(2-)" RELATED [chebi] +synonym: "O-phospho-D-tyrosine(2-)" RELATED [submitter] +xref: metacyc.compound:CPD-3729 {source="metacyc.compound"} is_a: CHEBI:74955 ! O(4)-phosphonatotyrosine(2-) -relationship: is_enantiomer_of CHEBI:62338 ! O(4)-phosphonato-L-tyrosine(2-) +relationship: RO:0018039 CHEBI:62338 ! is enantiomer of O(4)-phosphonato-L-tyrosine(2-) [Term] id: CHEBI:74783 name: astringent def: "A compound that causes the contraction of body tissues, typically used to reduce bleeding from minor abrasions." [] -subset: 3_STAR -synonym: "adstringent" RELATED [ChEBI] -synonym: "adstringents" RELATED [ChEBI] -synonym: "astringents" RELATED [ChEBI] -xref: Wikipedia:Astringent +subset: 3:STAR +synonym: "adstringent" RELATED [chebi] +synonym: "adstringents" RELATED [chebi] +synonym: "astringents" RELATED [chebi] +xref: wikipedia.en:Astringent {source="wikipedia.en"} is_a: CHEBI:23888 ! drug [Term] id: CHEBI:74955 name: O(4)-phosphonatotyrosine(2-) -def: "An organophosphate oxoanion arising from deprotonation of the phospho and carboxy groups as well as protonation of the amino group of O(4)-phosphotyrosine" [] -subset: 3_STAR -synonym: "2-ammonio-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED [IUPAC] -synonym: "2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" EXACT IUPAC_NAME [IUPAC] -synonym: "O(4)-phosphotyrosine(2-)" RELATED [ChEBI] -synonym: "O-phosphotyrosine(2-)" RELATED [ChEBI] -synonym: "phosphotyrosine(2-)" RELATED [ChEBI] +def: "An organophosphate oxoanion arising from deprotonation of the phospho and carboxy groups as well as protonation of the amino group of O4-phosphotyrosine" [] +subset: 3:STAR +synonym: "2-ammonio-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED [iupac] +synonym: "2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" EXACT IUPAC:NAME [IUPAC] +synonym: "2-azaniumyl-3-[4-(phosphonatooxy)phenyl]propanoate" RELATED IUPAC:NAME [iupac] +synonym: "O(4)-phosphotyrosine(2-)" RELATED [chebi] +synonym: "O-phosphotyrosine(2-)" RELATED [chebi] +synonym: "phosphotyrosine(2-)" RELATED [chebi] is_a: CHEBI:58945 ! organophosphate oxoanion -relationship: is_conjugate_base_of CHEBI:74956 ! O(4)-phosphotyrosine +relationship: RO:0018033 CHEBI:74956 ! is deprotonated form of O(4)-phosphotyrosine [Term] id: CHEBI:74956 name: O(4)-phosphotyrosine -def: "A non-proteinogenic alpha-amino acid that is tyrosine phosphorylated at the phenolic hydroxy group." [] -subset: 3_STAR -synonym: "O-phosphonotyrosine" EXACT IUPAC_NAME [IUPAC] -synonym: "O-phosphotyrosine" RELATED [ChEBI] -synonym: "phosphotyrosine" RELATED [ChEBI] -xref: CAS:41863-47-2 {source="Reaxys"} -xref: Reaxys:4260804 {source="Reaxys"} +def: "A non-proteinogenic α-amino acid that is tyrosine phosphorylated at the phenolic hydroxy group." [] +subset: 3:STAR +synonym: "O-phosphonotyrosine" EXACT IUPAC:NAME [IUPAC] +synonym: "O-phosphonotyrosine" RELATED IUPAC:NAME [iupac] +synonym: "O-phosphotyrosine" RELATED [chebi] +synonym: "phosphotyrosine" RELATED [chebi] +xref: cas:41863-47-2 {source="cas"} +xref: reaxys:4260804 {source="reaxys"} is_a: CHEBI:21968 ! O-phosphoamino acid is_a: CHEBI:33856 ! aromatic amino acid is_a: CHEBI:62761 ! tyrosine derivative is_a: CHEBI:83925 ! non-proteinogenic alpha-amino acid -relationship: is_conjugate_acid_of CHEBI:74955 ! O(4)-phosphonatotyrosine(2-) +relationship: RO:0018034 CHEBI:74955 ! is protonated form of O(4)-phosphonatotyrosine(2-) [Term] id: CHEBI:74959 name: O(4)-phospho-D-tyrosine -def: "A D-tyrosine derivative that is D-tyrosine phosphorylated at the phenolic hydroxy group." [] -subset: 3_STAR -synonym: "O-phospho-D-tyrosine" RELATED [ChEBI] -synonym: "O-phosphono-D-tyrosine" EXACT IUPAC_NAME [IUPAC] -xref: MetaCyc:CPD-3729 -xref: Reaxys:13579292 {source="Reaxys"} +def: "A D-tyrosine derivative that is D-tyrosine phosphorylated at the phenolic hydroxy group." [] +subset: 3:STAR +synonym: "O-phospho-D-tyrosine" RELATED [chebi] +synonym: "O-phosphono-D-tyrosine" EXACT IUPAC:NAME [IUPAC] +synonym: "O-phosphono-D-tyrosine" RELATED IUPAC:NAME [iupac] +xref: metacyc.compound:CPD-3729 {source="metacyc.compound"} +xref: reaxys:13579292 {source="reaxys"} is_a: CHEBI:16733 ! D-alpha-amino acid is_a: CHEBI:74956 ! O(4)-phosphotyrosine is_a: CHEBI:84124 ! D-tyrosine derivative -relationship: is_enantiomer_of CHEBI:37788 ! O(4)-phospho-L-tyrosine +relationship: RO:0018039 CHEBI:37788 ! is enantiomer of O(4)-phospho-L-tyrosine [Term] id: CHEBI:75600 name: EC 6.3.* (C-N bond-forming ligase) inhibitor -def: "A ligase inhibitor that interferes with the action of a C-N bond-forming ligase (EC 6.3.*.*)." [] -subset: 3_STAR -synonym: "C--N bond-forming ligase inhibitor" RELATED [ChEBI] -synonym: "C--N bond-forming ligase inhibitors" RELATED [ChEBI] -synonym: "C-N bond-forming ligase (EC 6.3.*) inhibitor" RELATED [ChEBI] -synonym: "C-N bond-forming ligase (EC 6.3.*) inhibitors" RELATED [ChEBI] -synonym: "C-N bond-forming ligase inhibitor" RELATED [ChEBI] -synonym: "C-N bond-forming ligase inhibitors" RELATED [ChEBI] -synonym: "EC 6.3.* (C-N bond-forming ligase) inhibitorS" RELATED [ChEBI] -synonym: "EC 6.3.* inhibitor" RELATED [ChEBI] -synonym: "EC 6.3.* inhibitors" RELATED [ChEBI] -synonym: "EC 6.3.*.* inhibitor" RELATED [ChEBI] -synonym: "EC 6.3.*.* inhibitors" RELATED [ChEBI] +def: "A ligase inhibitor that interferes with the action of a C‒N bond-forming ligase (EC 6.3.*.*)." [] +subset: 3:STAR +synonym: "C--N bond-forming ligase inhibitor" RELATED [chebi] +synonym: "C--N bond-forming ligase inhibitors" RELATED [chebi] +synonym: "C-N bond-forming ligase (EC 6.3.*) inhibitor" RELATED [chebi] +synonym: "C-N bond-forming ligase (EC 6.3.*) inhibitors" RELATED [chebi] +synonym: "C-N bond-forming ligase inhibitor" RELATED [chebi] +synonym: "C-N bond-forming ligase inhibitors" RELATED [chebi] +synonym: "EC 6.3.* (C-N bond-forming ligase) inhibitorS" RELATED [chebi] +synonym: "EC 6.3.* inhibitor" RELATED [chebi] +synonym: "EC 6.3.* inhibitors" RELATED [chebi] +synonym: "EC 6.3.*.* inhibitor" RELATED [chebi] +synonym: "EC 6.3.*.* inhibitors" RELATED [chebi] is_a: CHEBI:75603 ! EC 6.* (ligase) inhibitor [Term] id: CHEBI:75603 name: EC 6.* (ligase) inhibitor def: "Any enzyme inhibitor that interferes with the action of a ligase (EC 6.*.*.*). Ligases are enzymes that catalyse the joining of two molecules with concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate." [] -subset: 3_STAR -synonym: "EC 6.* (ligase) inhibitors" RELATED [ChEBI] -synonym: "EC 6.* inhibitor" RELATED [ChEBI] -synonym: "EC 6.* inhibitors" RELATED [ChEBI] -synonym: "EC 6.*.*.* inhibitor" RELATED [ChEBI] -synonym: "EC 6.*.*.* inhibitors" RELATED [ChEBI] -synonym: "ligase inhibitor" RELATED [ChEBI] -synonym: "ligase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Ligase +subset: 3:STAR +synonym: "EC 6.* (ligase) inhibitors" RELATED [chebi] +synonym: "EC 6.* inhibitor" RELATED [chebi] +synonym: "EC 6.* inhibitors" RELATED [chebi] +synonym: "EC 6.*.*.* inhibitor" RELATED [chebi] +synonym: "EC 6.*.*.* inhibitors" RELATED [chebi] +synonym: "ligase inhibitor" RELATED [chebi] +synonym: "ligase inhibitors" RELATED [chebi] +xref: wikipedia.en:Ligase {source="wikipedia.en"} is_a: CHEBI:23924 ! enzyme inhibitor [Term] id: CHEBI:75763 name: eukaryotic metabolite def: "Any metabolite produced during a metabolic reaction in eukaryotes, the taxon that include members of the fungi, plantae and animalia kingdoms." [] -subset: 3_STAR -synonym: "eukaryotic metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "eukaryotic metabolites" RELATED [chebi] is_a: CHEBI:25212 ! metabolite [Term] @@ -12790,8 +13305,8 @@ name: animal metabolite alt_id: CHEBI:77721 alt_id: CHEBI:77743 def: "Any eukaryotic metabolite produced during a metabolic reaction in animals that include diverse creatures from sponges, insects to mammals." [] -subset: 3_STAR -synonym: "animal metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "animal metabolites" RELATED [chebi] is_a: CHEBI:75763 ! eukaryotic metabolite [Term] @@ -12800,18 +13315,18 @@ name: mammalian metabolite alt_id: CHEBI:77464 alt_id: CHEBI:77744 def: "Any animal metabolite produced during a metabolic reaction in mammals." [] -subset: 3_STAR -synonym: "mammalian metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "mammalian metabolites" RELATED [chebi] is_a: CHEBI:75767 ! animal metabolite [Term] id: CHEBI:75771 name: mouse metabolite -def: "Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus)." [] -subset: 3_STAR -synonym: "mouse metabolites" RELATED [ChEBI] -synonym: "Mus musculus metabolite" RELATED [ChEBI] -synonym: "Mus musculus metabolites" RELATED [ChEBI] +def: "Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus)." [] +subset: 3:STAR +synonym: "mouse metabolites" RELATED [chebi] +synonym: "Mus musculus metabolite" RELATED [chebi] +synonym: "Mus musculus metabolites" RELATED [chebi] is_a: CHEBI:75768 ! mammalian metabolite [Term] @@ -12819,200 +13334,200 @@ id: CHEBI:75772 name: Saccharomyces cerevisiae metabolite alt_id: CHEBI:76949 alt_id: CHEBI:76951 -def: "Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae)." [] -subset: 3_STAR -synonym: "baker's yeast metabolite" RELATED [ChEBI] -synonym: "baker's yeast metabolites" RELATED [ChEBI] -synonym: "baker's yeast secondary metabolite" RELATED [ChEBI] -synonym: "baker's yeast secondary metabolites" RELATED [ChEBI] -synonym: "S. cerevisiae metabolite" RELATED [ChEBI] -synonym: "S. cerevisiae metabolites" RELATED [ChEBI] -synonym: "S. cerevisiae secondary metabolite" RELATED [ChEBI] -synonym: "S. cerevisiae secondary metabolites" RELATED [ChEBI] -synonym: "Saccharomyces cerevisiae metabolites" RELATED [ChEBI] -synonym: "Saccharomyces cerevisiae secondary metabolites" RELATED [ChEBI] +def: "Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae )." [] +subset: 3:STAR +synonym: "baker's yeast metabolite" RELATED [chebi] +synonym: "baker's yeast metabolites" RELATED [chebi] +synonym: "baker's yeast secondary metabolite" RELATED [chebi] +synonym: "baker's yeast secondary metabolites" RELATED [chebi] +synonym: "S. cerevisiae metabolite" RELATED [chebi] +synonym: "S. cerevisiae metabolites" RELATED [chebi] +synonym: "S. cerevisiae secondary metabolite" RELATED [chebi] +synonym: "S. cerevisiae secondary metabolites" RELATED [chebi] +synonym: "Saccharomyces cerevisiae metabolites" RELATED [chebi] +synonym: "Saccharomyces cerevisiae secondary metabolites" RELATED [chebi] is_a: CHEBI:76946 ! fungal metabolite [Term] id: CHEBI:75787 name: prokaryotic metabolite def: "Any metabolite produced during a metabolic reaction in prokaryotes, the taxon that include members of domains such as the bacteria and archaea." [] -subset: 3_STAR -synonym: "prokaryotic metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "prokaryotic metabolites" RELATED [chebi] is_a: CHEBI:25212 ! metabolite [Term] id: CHEBI:76042 name: aromatic amino-acid zwitterion def: "An amino acid zwitterion obtained by transfer of a proton from the carboxy to the amino group of any aromatic amino-acid." [] -subset: 3_STAR -synonym: "an aromatic amino-acid" RELATED [UniProt] -synonym: "aromatic amino-acid zwitterions" RELATED [ChEBI] -xref: MetaCyc:Aromatic-Amino-Acids {source="SUBMITTER"} +subset: 3:STAR +synonym: "an aromatic amino-acid" RELATED [uniprot_ft] +synonym: "aromatic amino-acid zwitterions" RELATED [chebi] +xref: metacyc.compound:Aromatic-Amino-Acids {source="metacyc.compound"} is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_tautomer_of CHEBI:33856 ! aromatic amino acid +relationship: RO:0018036 CHEBI:33856 ! is tautomer of aromatic amino acid [Term] id: CHEBI:76206 name: xenobiotic metabolite def: "Any metabolite produced by metabolism of a xenobiotic compound." [] -subset: 3_STAR -synonym: "xenobiotic metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "xenobiotic metabolites" RELATED [chebi] is_a: CHEBI:25212 ! metabolite [Term] id: CHEBI:76413 name: greenhouse gas def: "A gas in an atmosphere that absorbs and emits radiation within the thermal infrared range, so contributing to the 'greenhouse effect'." [] -subset: 3_STAR -synonym: "greenhouse gases" RELATED [ChEBI] -xref: Wikipedia:Greenhouse_gas +subset: 3:STAR +synonym: "greenhouse gases" RELATED [chebi] +xref: wikipedia.en:Greenhouse_gas {source="wikipedia.en"} is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:76414 name: propellant def: "A compressed gas or liquid with a boiling point lower than room temperature which to used to propel and dispense liquids such as deodorants, insecticides, paints, etc. from aerosol cans." [] -subset: 3_STAR -synonym: "propellants" RELATED [ChEBI] -xref: PMID:22519407 {source="Europe PMC"} -xref: PMID:24001847 {source="Europe PMC"} +subset: 3:STAR +synonym: "propellants" RELATED [chebi] +xref: pubmed:22519407 {source="pubmed"} +xref: pubmed:24001847 {source="pubmed"} is_a: CHEBI:33232 ! application [Term] id: CHEBI:76725 name: EC 1.* (oxidoreductase) inhibitor def: "An enzyme inhibitor which interferes with the action of an oxidoreductase (EC 1.*.*.*)." [] -subset: 3_STAR -synonym: "EC 1.* (oxidoreductase) inhibitors" RELATED [ChEBI] -synonym: "EC 1.* inhibitor" RELATED [ChEBI] -synonym: "EC 1.* inhibitors" RELATED [ChEBI] -synonym: "oxidoreductase (EC 1.*) inhibitor" RELATED [ChEBI] -synonym: "oxidoreductase (EC 1.*) inhibitors" RELATED [ChEBI] -synonym: "oxidoreductase inhibitor" RELATED [ChEBI] -synonym: "oxidoreductase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Oxidoreductase +subset: 3:STAR +synonym: "EC 1.* (oxidoreductase) inhibitors" RELATED [chebi] +synonym: "EC 1.* inhibitor" RELATED [chebi] +synonym: "EC 1.* inhibitors" RELATED [chebi] +synonym: "oxidoreductase (EC 1.*) inhibitor" RELATED [chebi] +synonym: "oxidoreductase (EC 1.*) inhibitors" RELATED [chebi] +synonym: "oxidoreductase inhibitor" RELATED [chebi] +synonym: "oxidoreductase inhibitors" RELATED [chebi] +xref: wikipedia.en:Oxidoreductase {source="wikipedia.en"} is_a: CHEBI:23924 ! enzyme inhibitor [Term] id: CHEBI:76729 name: EC 1.3.* (oxidoreductase acting on donor CH-CH group) inhibitor def: "An oxidoreductase inhibitor which interferes with the action of an oxidoreductase acting on the CH-CH group of donors (EC 1.3.*.*)." [] -subset: 3_STAR -synonym: "EC 1.3.* (oxidoreductase acting on donor CH-CH group) inhibitors" RELATED [ChEBI] -synonym: "EC 1.3.* inhibitor" RELATED [ChEBI] -synonym: "EC 1.3.* inhibitors" RELATED [ChEBI] -synonym: "inhibitor of oxidoreductase acting on CH-CH group of donor" RELATED [ChEBI] -synonym: "inhibitor of oxidoreductase acting on CH-CH group of donors" RELATED [ChEBI] -synonym: "inhibitors of oxidoreductase acting on CH-CH group of donor" RELATED [ChEBI] -synonym: "inhibitors of oxidoreductase acting on CH-CH group of donors" RELATED [ChEBI] -synonym: "oxidoreductase acting on donor CH-CH group (EC 1.3.*) inhibitor" RELATED [ChEBI] -synonym: "oxidoreductase acting on donor CH-CH group (EC 1.3.*) inhibitors" RELATED [ChEBI] -synonym: "oxidoreductase acting on donor CH-CH group inhibitor" RELATED [ChEBI] -synonym: "oxidoreductase acting on donor CH-CH group inhibitors" RELATED [ChEBI] +subset: 3:STAR +synonym: "EC 1.3.* (oxidoreductase acting on donor CH-CH group) inhibitors" RELATED [chebi] +synonym: "EC 1.3.* inhibitor" RELATED [chebi] +synonym: "EC 1.3.* inhibitors" RELATED [chebi] +synonym: "inhibitor of oxidoreductase acting on CH-CH group of donor" RELATED [chebi] +synonym: "inhibitor of oxidoreductase acting on CH-CH group of donors" RELATED [chebi] +synonym: "inhibitors of oxidoreductase acting on CH-CH group of donor" RELATED [chebi] +synonym: "inhibitors of oxidoreductase acting on CH-CH group of donors" RELATED [chebi] +synonym: "oxidoreductase acting on donor CH-CH group (EC 1.3.*) inhibitor" RELATED [chebi] +synonym: "oxidoreductase acting on donor CH-CH group (EC 1.3.*) inhibitors" RELATED [chebi] +synonym: "oxidoreductase acting on donor CH-CH group inhibitor" RELATED [chebi] +synonym: "oxidoreductase acting on donor CH-CH group inhibitors" RELATED [chebi] is_a: CHEBI:76725 ! EC 1.* (oxidoreductase) inhibitor [Term] id: CHEBI:76759 name: EC 3.* (hydrolase) inhibitor def: "Any enzyme inhibitor that interferes with the action of a hydrolase (EC 3.*.*.*)." [] -subset: 3_STAR -synonym: "EC 3.* (hydrolase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.* inhibitor" RELATED [ChEBI] -synonym: "EC 3.* inhibitors" RELATED [ChEBI] -synonym: "EC 3.*.*.* inhibitor" RELATED [ChEBI] -synonym: "EC 3.*.*.* inhibitors" RELATED [ChEBI] -synonym: "hydrolase (EC 3.*) inhibitor" RELATED [ChEBI] -synonym: "hydrolase (EC 3.*) inhibitors" RELATED [ChEBI] -synonym: "hydrolase inhibitor" RELATED [ChEBI] -synonym: "hydrolase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Hydrolase +subset: 3:STAR +synonym: "EC 3.* (hydrolase) inhibitors" RELATED [chebi] +synonym: "EC 3.* inhibitor" RELATED [chebi] +synonym: "EC 3.* inhibitors" RELATED [chebi] +synonym: "EC 3.*.*.* inhibitor" RELATED [chebi] +synonym: "EC 3.*.*.* inhibitors" RELATED [chebi] +synonym: "hydrolase (EC 3.*) inhibitor" RELATED [chebi] +synonym: "hydrolase (EC 3.*) inhibitors" RELATED [chebi] +synonym: "hydrolase inhibitor" RELATED [chebi] +synonym: "hydrolase inhibitors" RELATED [chebi] +xref: wikipedia.en:Hydrolase {source="wikipedia.en"} is_a: CHEBI:23924 ! enzyme inhibitor [Term] id: CHEBI:76760 name: EC 3.1.* (ester hydrolase) inhibitor def: "A hydrolase inhibitor that interferes with the action of any ester hydrolase (EC 3.1.*.*)." [] -subset: 3_STAR -synonym: "EC 3.1.* (ester hydrolase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.1.* inhibitor" RELATED [ChEBI] -synonym: "EC 3.1.* inhibitors" RELATED [ChEBI] -synonym: "ester hydrolase (EC 3.1.*) inhibitor" RELATED [ChEBI] -synonym: "ester hydrolase (EC 3.1.*) inhibitors" RELATED [ChEBI] -synonym: "ester hydrolase inhibitor" RELATED [ChEBI] -synonym: "ester hydrolase inhibitors" RELATED [ChEBI] +subset: 3:STAR +synonym: "EC 3.1.* (ester hydrolase) inhibitors" RELATED [chebi] +synonym: "EC 3.1.* inhibitor" RELATED [chebi] +synonym: "EC 3.1.* inhibitors" RELATED [chebi] +synonym: "ester hydrolase (EC 3.1.*) inhibitor" RELATED [chebi] +synonym: "ester hydrolase (EC 3.1.*) inhibitors" RELATED [chebi] +synonym: "ester hydrolase inhibitor" RELATED [chebi] +synonym: "ester hydrolase inhibitors" RELATED [chebi] is_a: CHEBI:76759 ! EC 3.* (hydrolase) inhibitor [Term] id: CHEBI:76764 name: EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor def: "Any hydrolase inhibitor that interferes with the action of a hydrolase acting on C-N bonds, other than peptide bonds (EC 3.5.*.*)." [] -subset: 3_STAR -synonym: "EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitor" RELATED [ChEBI] -synonym: "EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitor" RELATED [ChEBI] -synonym: "EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.* inhibitor" RELATED [ChEBI] -synonym: "EC 3.5.* inhibitors" RELATED [ChEBI] +subset: 3:STAR +synonym: "EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitor" RELATED [chebi] +synonym: "EC 3.5.* (hydrolase acting on non-peptide C-N bond) inhibitors" RELATED [chebi] +synonym: "EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitor" RELATED [chebi] +synonym: "EC 3.5.* (hydrolases acting on C-N bonds, other than peptide bonds) inhibitors" RELATED [chebi] +synonym: "EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitors" RELATED [chebi] +synonym: "EC 3.5.* inhibitor" RELATED [chebi] +synonym: "EC 3.5.* inhibitors" RELATED [chebi] is_a: CHEBI:76759 ! EC 3.* (hydrolase) inhibitor [Term] id: CHEBI:76775 name: EC 3.1.3.* (phosphoric monoester hydrolase) inhibitor def: "An EC 3.1.* (ester hydrolase) inhibitor that interferes with the action of any phosphoric monoester hydrolase (EC 3.1.3.*)." [] -subset: 3_STAR -synonym: "EC 3.1.3.* (phosphoric monoester hydrolase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.1.3.* inhibitor" RELATED [ChEBI] -synonym: "EC 3.1.3.* inhibitors" RELATED [ChEBI] -synonym: "inhibitor of phosphoric monoester hydrolase" RELATED [ChEBI] -synonym: "inhibitor of phosphoric monoester hydrolase (EC 3.1.3.*)" RELATED [ChEBI] -synonym: "inhibitors of phosphoric monoester hydrolase" RELATED [ChEBI] -synonym: "inhibitors of phosphoric monoester hydrolase (EC 3.1.3.*)" RELATED [ChEBI] -synonym: "phosphoric monoester hydrolase (EC 3.1.3.*) inhibitor" RELATED [ChEBI] -synonym: "phosphoric monoester hydrolase (EC 3.1.3.*) inhibitors" RELATED [ChEBI] -synonym: "phosphoric monoester hydrolase inhibitor" RELATED [ChEBI] -synonym: "phosphoric monoester hydrolase inhibitors" RELATED [ChEBI] +subset: 3:STAR +synonym: "EC 3.1.3.* (phosphoric monoester hydrolase) inhibitors" RELATED [chebi] +synonym: "EC 3.1.3.* inhibitor" RELATED [chebi] +synonym: "EC 3.1.3.* inhibitors" RELATED [chebi] +synonym: "inhibitor of phosphoric monoester hydrolase" RELATED [chebi] +synonym: "inhibitor of phosphoric monoester hydrolase (EC 3.1.3.*)" RELATED [chebi] +synonym: "inhibitors of phosphoric monoester hydrolase" RELATED [chebi] +synonym: "inhibitors of phosphoric monoester hydrolase (EC 3.1.3.*)" RELATED [chebi] +synonym: "phosphoric monoester hydrolase (EC 3.1.3.*) inhibitor" RELATED [chebi] +synonym: "phosphoric monoester hydrolase (EC 3.1.3.*) inhibitors" RELATED [chebi] +synonym: "phosphoric monoester hydrolase inhibitor" RELATED [chebi] +synonym: "phosphoric monoester hydrolase inhibitors" RELATED [chebi] is_a: CHEBI:76760 ! EC 3.1.* (ester hydrolase) inhibitor [Term] id: CHEBI:76807 name: EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor def: "An EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor that interferes with the action of any non-peptide linear amide C-N hydrolase (EC 3.5.1.*)." [] -subset: 3_STAR -synonym: "EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.1.* inhibitor" RELATED [ChEBI] -synonym: "EC 3.5.1.* inhibitors" RELATED [ChEBI] -synonym: "non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitor" RELATED [ChEBI] -synonym: "non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitors" RELATED [ChEBI] +subset: 3:STAR +synonym: "EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitors" RELATED [chebi] +synonym: "EC 3.5.1.* inhibitor" RELATED [chebi] +synonym: "EC 3.5.1.* inhibitors" RELATED [chebi] +synonym: "non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitor" RELATED [chebi] +synonym: "non-peptide linear amide C-N hydrolase (EC 3.5.1.*) inhibitors" RELATED [chebi] is_a: CHEBI:76764 ! EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor [Term] id: CHEBI:76823 name: EC 6.3.1.* (acid-ammonia/amine ligase) inhibitor -def: "An EC 6.3.* (C-N bond-forming ligase) inhibitor that interferes with the action of any acid-ammonia (or amine) ligase (EC 6.3.1.*)." [] -subset: 3_STAR -synonym: "acid-ammonia (or amine) ligase inhibitor" RELATED [ChEBI] -synonym: "acid-ammonia (or amine) ligase inhibitors" RELATED [ChEBI] -synonym: "EC 6.3.1.* (acid-ammonia/amine ligase) inhibitors" RELATED [ChEBI] -synonym: "EC 6.3.1.* inhibitor" RELATED [ChEBI] -synonym: "EC 6.3.1.* inhibitors" RELATED [ChEBI] +def: "An EC 6.3.* (C‒N bond-forming ligase) inhibitor that interferes with the action of any acid-ammonia (or amine) ligase (EC 6.3.1.*)." [] +subset: 3:STAR +synonym: "acid-ammonia (or amine) ligase inhibitor" RELATED [chebi] +synonym: "acid-ammonia (or amine) ligase inhibitors" RELATED [chebi] +synonym: "EC 6.3.1.* (acid-ammonia/amine ligase) inhibitors" RELATED [chebi] +synonym: "EC 6.3.1.* inhibitor" RELATED [chebi] +synonym: "EC 6.3.1.* inhibitors" RELATED [chebi] is_a: CHEBI:75600 ! EC 6.3.* (C-N bond-forming ligase) inhibitor [Term] id: CHEBI:76857 name: EC 1.3.1.* (oxidoreductase acting on donor CH-CH group, NAD(+) or NADP(+) as acceptor) inhibitor -def: "An EC 1.3.* (oxidoreductase acting on donor CH-CH group) inhibitor that interferes with the action of any such enzyme using NAD(+) or NADP(+) as acceptor (EC 1.3.1.*)." [] -subset: 3_STAR -synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor) inhibitor" RELATED [ChEBI] -synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor) inhibitors" RELATED [ChEBI] -synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor, NAD(+) or NADP(+) as acceptor) inhibitor" RELATED [ChEBI] -synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor, NAD(+) or NADP(+) as acceptor) inhibitors" RELATED [ChEBI] -synonym: "EC 1.3.1.* (oxidoreductase acting on donor CH-CH group, NAD(+) or NADP(+) as acceptor) inhibitors" RELATED [ChEBI] -synonym: "EC 1.3.1.* inhibitor" RELATED [ChEBI] -synonym: "EC 1.3.1.* inhibitors" RELATED [ChEBI] -synonym: "oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor (EC 1.3.1.*) inhibitor" RELATED [ChEBI] -synonym: "oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor (EC 1.3.1.*) inhibitors" RELATED [ChEBI] +def: "An EC 1.3.* (oxidoreductase acting on donor CH-CH group) inhibitor that interferes with the action of any such enzyme using NAD+ or NADP+ as acceptor (EC 1.3.1.*)." [] +subset: 3:STAR +synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor) inhibitor" RELATED [chebi] +synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor) inhibitors" RELATED [chebi] +synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor, NAD(+) or NADP(+) as acceptor) inhibitor" RELATED [chebi] +synonym: "EC 1.3.1.* (oxidoreductase acting on CH-CH group of donor, NAD(+) or NADP(+) as acceptor) inhibitors" RELATED [chebi] +synonym: "EC 1.3.1.* (oxidoreductase acting on donor CH-CH group, NAD(+) or NADP(+) as acceptor) inhibitors" RELATED [chebi] +synonym: "EC 1.3.1.* inhibitor" RELATED [chebi] +synonym: "EC 1.3.1.* inhibitors" RELATED [chebi] +synonym: "oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor (EC 1.3.1.*) inhibitor" RELATED [chebi] +synonym: "oxidoreductase acting on CH-CH group of donor with NAD(+) or NADP(+) as acceptor (EC 1.3.1.*) inhibitors" RELATED [chebi] is_a: CHEBI:76729 ! EC 1.3.* (oxidoreductase acting on donor CH-CH group) inhibitor [Term] @@ -13021,9 +13536,9 @@ name: plant metabolite alt_id: CHEBI:75766 alt_id: CHEBI:76925 def: "Any eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms." [] -subset: 3_STAR -synonym: "plant metabolites" RELATED [ChEBI] -synonym: "plant secondary metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "plant metabolites" RELATED [chebi] +synonym: "plant secondary metabolites" RELATED [chebi] is_a: CHEBI:75763 ! eukaryotic metabolite [Term] @@ -13032,16 +13547,16 @@ name: fungal metabolite alt_id: CHEBI:75765 alt_id: CHEBI:76947 def: "Any eukaryotic metabolite produced during a metabolic reaction in fungi, the kingdom that includes microorganisms such as the yeasts and moulds." [] -subset: 3_STAR -synonym: "fungal metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "fungal metabolites" RELATED [chebi] is_a: CHEBI:75763 ! eukaryotic metabolite [Term] id: CHEBI:76967 name: human xenobiotic metabolite def: "Any human metabolite produced by metabolism of a xenobiotic compound in humans." [] -subset: 3_STAR -synonym: "human xenobiotic metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "human xenobiotic metabolites" RELATED [chebi] is_a: CHEBI:76206 ! xenobiotic metabolite is_a: CHEBI:77746 ! human metabolite @@ -13051,28 +13566,28 @@ name: bacterial metabolite alt_id: CHEBI:75760 alt_id: CHEBI:76970 def: "Any prokaryotic metabolite produced during a metabolic reaction in bacteria." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:75787 ! prokaryotic metabolite [Term] id: CHEBI:76971 name: Escherichia coli metabolite -def: "Any bacterial metabolite produced during a metabolic reaction in Escherichia coli." [] -subset: 3_STAR -synonym: "E.coli metabolite" RELATED [ChEBI] -synonym: "E.coli metabolites" RELATED [ChEBI] -synonym: "Escherichia coli metabolites" RELATED [ChEBI] +def: "Any bacterial metabolite produced during a metabolic reaction in Escherichia coli." [] +subset: 3:STAR +synonym: "E.coli metabolite" RELATED [chebi] +synonym: "E.coli metabolites" RELATED [chebi] +synonym: "Escherichia coli metabolites" RELATED [chebi] is_a: CHEBI:76969 ! bacterial metabolite [Term] id: CHEBI:77182 name: food colouring def: "A food additive that imparts colour to food. In European countries, E-numbers for permitted food colours are from E 100 to E 199, divided into yellows (E 100-109), oranges (E 110-119), reds (E 120-129), blues and violets (E 130-139), greens (E 140-149), browns and blacks (E 150-159), and others (E 160-199)." [] -subset: 3_STAR -synonym: "food coloring" RELATED [ChEBI] -synonym: "food colorings" RELATED [ChEBI] -synonym: "food colourings" RELATED [ChEBI] -xref: Wikipedia:Food_coloring +subset: 3:STAR +synonym: "food coloring" RELATED [chebi] +synonym: "food colorings" RELATED [chebi] +synonym: "food colourings" RELATED [chebi] +xref: wikipedia.en:Food_coloring {source="wikipedia.en"} is_a: CHEBI:64047 ! food additive [Term] @@ -13080,67 +13595,67 @@ id: CHEBI:77746 name: human metabolite alt_id: CHEBI:75770 alt_id: CHEBI:77123 -def: "Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens)." [] -subset: 3_STAR -synonym: "H. sapiens metabolite" RELATED [ChEBI] -synonym: "H. sapiens metabolites" RELATED [ChEBI] -synonym: "Homo sapiens metabolite" RELATED [ChEBI] -synonym: "Homo sapiens metabolites" RELATED [ChEBI] +def: "Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens)." [] +subset: 3:STAR +synonym: "H. sapiens metabolite" RELATED [chebi] +synonym: "H. sapiens metabolites" RELATED [chebi] +synonym: "Homo sapiens metabolite" RELATED [chebi] +synonym: "Homo sapiens metabolites" RELATED [chebi] is_a: CHEBI:75768 ! mammalian metabolite [Term] id: CHEBI:77941 name: EC 3.5.1.4 (amidase) inhibitor def: "An EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor that interferes with the action of amidase (EC 3.5.1.4)." [] -subset: 3_STAR -synonym: "acylamidase inhibitor" RELATED [ChEBI] -synonym: "acylamidase inhibitors" RELATED [ChEBI] -synonym: "acylamide amidohydrolase inhibitor" RELATED [ChEBI] -synonym: "acylamide amidohydrolase inhibitors" RELATED [ChEBI] -synonym: "amidase (EC 3.5.1.4) inhibitor" RELATED [ChEBI] -synonym: "amidase (EC 3.5.1.4) inhibitors" RELATED [ChEBI] -synonym: "amidase inhibitor" RELATED [ChEBI] -synonym: "amidase inhibitors" RELATED [ChEBI] -synonym: "amidohydrolase inhibitor" RELATED [ChEBI] -synonym: "amidohydrolase inhibitors" RELATED [ChEBI] -synonym: "deaminase inhibitor" RELATED [ChEBI] -synonym: "deaminase inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.1.4 (amidase) inhibitors" RELATED [ChEBI] -synonym: "EC 3.5.1.4 inhibitor" RELATED [ChEBI] -synonym: "EC 3.5.1.4 inhibitors" RELATED [ChEBI] -synonym: "fatty acylamidase inhibitor" RELATED [ChEBI] -synonym: "fatty acylamidase inhibitors" RELATED [ChEBI] -synonym: "N-acetylaminohydrolase inhibitor" RELATED [ChEBI] -synonym: "N-acetylaminohydrolase inhibitors" RELATED [ChEBI] -xref: Wikipedia:Amidase +subset: 3:STAR +synonym: "acylamidase inhibitor" RELATED [chebi] +synonym: "acylamidase inhibitors" RELATED [chebi] +synonym: "acylamide amidohydrolase inhibitor" RELATED [chebi] +synonym: "acylamide amidohydrolase inhibitors" RELATED [chebi] +synonym: "amidase (EC 3.5.1.4) inhibitor" RELATED [chebi] +synonym: "amidase (EC 3.5.1.4) inhibitors" RELATED [chebi] +synonym: "amidase inhibitor" RELATED [chebi] +synonym: "amidase inhibitors" RELATED [chebi] +synonym: "amidohydrolase inhibitor" RELATED [chebi] +synonym: "amidohydrolase inhibitors" RELATED [chebi] +synonym: "deaminase inhibitor" RELATED [chebi] +synonym: "deaminase inhibitors" RELATED [chebi] +synonym: "EC 3.5.1.4 (amidase) inhibitors" RELATED [chebi] +synonym: "EC 3.5.1.4 inhibitor" RELATED [chebi] +synonym: "EC 3.5.1.4 inhibitors" RELATED [chebi] +synonym: "fatty acylamidase inhibitor" RELATED [chebi] +synonym: "fatty acylamidase inhibitors" RELATED [chebi] +synonym: "N-acetylaminohydrolase inhibitor" RELATED [chebi] +synonym: "N-acetylaminohydrolase inhibitors" RELATED [chebi] +xref: wikipedia.en:Amidase {source="wikipedia.en"} is_a: CHEBI:76807 ! EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor [Term] id: CHEBI:77960 name: food firming agent def: "A food additive that is used to make or keep fruit or vegetable tissues firm and crisp. or which interacts with gelling agents such as pectin to produce or strengthen a gel." [] -subset: 3_STAR -synonym: "firming agent" RELATED [ChEBI] -synonym: "firming agents" RELATED [ChEBI] -synonym: "food firming agents" RELATED [ChEBI] -xref: Wikipedia:Firming_agent +subset: 3:STAR +synonym: "firming agent" RELATED [chebi] +synonym: "firming agents" RELATED [chebi] +synonym: "food firming agents" RELATED [chebi] +xref: wikipedia.en:Firming_agent {source="wikipedia.en"} is_a: CHEBI:64047 ! food additive [Term] id: CHEBI:77974 name: food packaging gas def: "A food additive that is a (generally inert) gas which is used to envelop foodstuffs during packing and so protect them from unwanted chemical reactions such as food spoilage or oxidation during subsequent transport and storage. The term includes propellant gases, used to expel foods from a container." [] -subset: 3_STAR -synonym: "food packaging gases" RELATED [ChEBI] -xref: Wikipedia:Packaging_gas +subset: 3:STAR +synonym: "food packaging gases" RELATED [chebi] +xref: wikipedia.en:Packaging_gas {source="wikipedia.en"} is_a: CHEBI:64047 ! food additive [Term] id: CHEBI:78017 name: food propellant def: "A propellant that is used to expel foods from an aerosol container." [] -subset: 3_STAR -synonym: "food propellants" RELATED [ChEBI] +subset: 3:STAR +synonym: "food propellants" RELATED [chebi] is_a: CHEBI:64047 ! food additive is_a: CHEBI:76414 ! propellant @@ -13148,8 +13663,8 @@ is_a: CHEBI:76414 ! propellant id: CHEBI:78113 name: fatty acid anion 3:0 def: "Any saturated fatty acid anion containing 3 carbons. Formed by deprotonation of the carboxylic acid moiety. Major species at pH 7.3." [] -subset: 3_STAR -synonym: "fatty acid 3:0" RELATED [UniProt] +subset: 3:STAR +synonym: "fatty acid 3:0" RELATED [uniprot_ft] is_a: CHEBI:58951 ! short-chain fatty acid anion is_a: CHEBI:58953 ! saturated fatty acid anion @@ -13157,109 +13672,109 @@ is_a: CHEBI:58953 ! saturated fatty acid anion id: CHEBI:78115 name: fatty acid anion 4:0 def: "Any saturated fatty acid anion containing 4 carbons. Formed by deprotonation of the carboxylic acid moiety. Major species at pH 7.3." [] -subset: 3_STAR -synonym: "fatty acid 4:0" RELATED [UniProt] +subset: 3:STAR +synonym: "fatty acid 4:0" RELATED [uniprot_ft] is_a: CHEBI:58951 ! short-chain fatty acid anion is_a: CHEBI:58953 ! saturated fatty acid anion -relationship: is_conjugate_base_of CHEBI:140601 ! fatty acid 4:0 +relationship: RO:0018033 CHEBI:140601 ! is deprotonated form of fatty acid 4:0 [Term] id: CHEBI:78295 name: food component def: "A physiological role played by any substance that is distributed in foodstuffs. It includes materials derived from plants or animals, such as vitamins or minerals, as well as environmental contaminants." [] -subset: 3_STAR -synonym: "dietary component" RELATED [ChEBI] -synonym: "dietary components" RELATED [ChEBI] -synonym: "food components" RELATED [ChEBI] +subset: 3:STAR +synonym: "dietary component" RELATED [chebi] +synonym: "dietary components" RELATED [chebi] +synonym: "food components" RELATED [chebi] is_a: CHEBI:52211 ! physiological role [Term] id: CHEBI:78298 name: environmental contaminant def: "Any minor or unwanted substance introduced into the environment that can have undesired effects." [] -subset: 3_STAR -synonym: "environmental contaminants" RELATED [ChEBI] +subset: 3:STAR +synonym: "environmental contaminants" RELATED [chebi] is_a: CHEBI:51086 ! chemical role [Term] id: CHEBI:78433 name: refrigerant def: "A substance used in a thermodynamic heat pump cycle or refrigeration cycle that undergoes a phase change from a gas to a liquid and back. Refrigerants are used in air-conditioning systems and freezers or refrigerators and are assigned a \"R\" number (by ASHRAE - formerly the American Society of Heating, Refrigerating and Air Conditioning Engineers), which is determined systematically according to their molecular structure." [] -subset: 3_STAR -synonym: "refrigerants" RELATED [ChEBI] -xref: Wikipedia:Refrigerant +subset: 3:STAR +synonym: "refrigerants" RELATED [chebi] +xref: wikipedia.en:Refrigerant {source="wikipedia.en"} is_a: CHEBI:33232 ! application [Term] id: CHEBI:78608 name: alpha-amino-acid zwitterion alt_id: CHEBI:83409 -def: "An amino acid-zwitterion obtained by transfer of a proton from the carboxy to the amino group of any alpha-amino acid; major species at pH 7.3." [] -subset: 3_STAR -synonym: "alpha-amino acid zwitterion" RELATED [ChEBI] -synonym: "alpha-amino acid zwitterions" RELATED [ChEBI] -synonym: "alpha-amino-acid zwitterions" RELATED [ChEBI] -synonym: "an alpha-amino acid" RELATED [UniProt] -xref: MetaCyc:Alpha-Amino-Acids {source="SUBMITTER"} +def: "An amino acid-zwitterion obtained by transfer of a proton from the carboxy to the amino group of any α-amino acid; major species at pH 7.3." [] +subset: 3:STAR +synonym: "alpha-amino acid zwitterion" RELATED [chebi] +synonym: "alpha-amino acid zwitterions" RELATED [chebi] +synonym: "alpha-amino-acid zwitterions" RELATED [chebi] +synonym: "an alpha-amino acid" RELATED [uniprot_ft] +xref: metacyc.compound:Alpha-Amino-Acids {source="metacyc.compound"} is_a: CHEBI:35238 ! amino-acid zwitterion -relationship: is_tautomer_of CHEBI:33704 ! alpha-amino acid +relationship: RO:0018036 CHEBI:33704 ! is tautomer of alpha-amino acid [Term] id: CHEBI:78616 name: carbohydrates and carbohydrate derivatives -def: "Any organooxygen compound that is a polyhydroxy-aldehyde or -ketone, or a compound derived from one. Carbohydrates contain only carbon, hydrogen and oxygen and usually have an empirical formula Cm(H2O)n; carbohydrate derivatives may contain other elements by substitution or condensation." [] -subset: 3_STAR -synonym: "carbohydrates and derivatives" RELATED [ChEBI] -synonym: "carbohydrates and their derivatives" RELATED [ChEBI] +def: "Any organooxygen compound that is a polyhydroxy-aldehyde or -ketone, or a compound derived from one. Carbohydrates contain only carbon, hydrogen and oxygen and usually have an empirical formula Cm(H2O)n; carbohydrate derivatives may contain other elements by substitution or condensation." [] +subset: 3:STAR +synonym: "carbohydrates and derivatives" RELATED [chebi] +synonym: "carbohydrates and their derivatives" RELATED [chebi] is_a: CHEBI:36963 ! organooxygen compound [Term] id: CHEBI:78675 name: fundamental metabolite def: "Any metabolite produced by all living cells." [] -subset: 3_STAR -synonym: "essential metabolite" RELATED [ChEBI] -synonym: "essential metabolites" RELATED [ChEBI] -synonym: "fundamental metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "essential metabolite" RELATED [chebi] +synonym: "essential metabolites" RELATED [chebi] +synonym: "fundamental metabolites" RELATED [chebi] is_a: CHEBI:25212 ! metabolite [Term] id: CHEBI:78840 name: olefinic compound def: "Any organic molecular entity that contains at least one C=C bond." [] -subset: 3_STAR -synonym: "olefinic compounds" RELATED [ChEBI] +subset: 3:STAR +synonym: "olefinic compounds" RELATED [chebi] is_a: CHEBI:50860 ! organic molecular entity [Term] id: CHEBI:79387 name: trivalent inorganic anion def: "Any inorganic anion with a valency of three." [] -subset: 3_STAR -synonym: "trivalent inorganic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "trivalent inorganic anions" RELATED [chebi] is_a: CHEBI:24834 ! inorganic anion [Term] id: CHEBI:79388 name: divalent inorganic anion def: "Any inorganic anion with a valency of two." [] -subset: 3_STAR -synonym: "divalent inorganic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "divalent inorganic anions" RELATED [chebi] is_a: CHEBI:24834 ! inorganic anion [Term] id: CHEBI:79389 name: monovalent inorganic anion def: "Any inorganic anion with a valency of one." [] -subset: 3_STAR -synonym: "monovalent inorganic anions" RELATED [ChEBI] +subset: 3:STAR +synonym: "monovalent inorganic anions" RELATED [chebi] is_a: CHEBI:24834 ! inorganic anion [Term] id: CHEBI:82663 name: elemental iron def: "An elemental molecular entity in which all of the atoms have atomic number 26." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24873 ! iron molecular entity is_a: CHEBI:33259 ! elemental molecular entity @@ -13267,57 +13782,58 @@ is_a: CHEBI:33259 ! elemental molecular entity id: CHEBI:83039 name: crustacean metabolite def: "An animal metabolite produced by arthropods such as crabs, lobsters, crayfish, shrimps and krill." [] -subset: 3_STAR -synonym: "crustacean metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "crustacean metabolites" RELATED [chebi] is_a: CHEBI:75767 ! animal metabolite [Term] id: CHEBI:83056 name: Daphnia magna metabolite -def: "A Daphnia metabolite produced by the species Daphnia magna." [] -subset: 3_STAR -synonym: "Daphnia magna metabolites" RELATED [ChEBI] +def: "A Daphnia metabolite produced by the species Daphnia magna." [] +subset: 3:STAR +synonym: "Daphnia magna metabolites" RELATED [chebi] is_a: CHEBI:83057 ! Daphnia metabolite [Term] id: CHEBI:83057 name: Daphnia metabolite -def: "A crustacean metabolite produced by the genus of small planktonic arthropods, Daphnia" [] -subset: 3_STAR -synonym: "Daphnia metabolites" RELATED [ChEBI] -xref: Wikipedia:Daphnia +def: "A crustacean metabolite produced by the genus of small planktonic arthropods, Daphnia" [] +subset: 3:STAR +synonym: "Daphnia metabolites" RELATED [chebi] +xref: wikipedia.en:Daphnia {source="wikipedia.en"} is_a: CHEBI:83039 ! crustacean metabolite [Term] id: CHEBI:83228 name: L-alpha-amino acid residue -def: "An alpha-amino-acid residue derived from an L-alpha-amino acid." [] -subset: 3_STAR -synonym: "an L-alpha amino acid residue" RELATED [UniProt] -synonym: "L-alpha-amino acid residue" EXACT [ChEBI] -synonym: "L-alpha-amino acid residues" RELATED [ChEBI] +def: "An α-amino-acid residue derived from an L-α-amino acid." [] +subset: 3:STAR +synonym: "an L-alpha amino acid residue" RELATED [uniprot_ft] +synonym: "L-alpha-amino acid residue" RELATED [chebi] +synonym: "L-alpha-amino acid residues" RELATED [chebi] is_a: CHEBI:33710 ! alpha-amino-acid residue -relationship: is_substituent_group_from CHEBI:15705 ! L-alpha-amino acid +relationship: RO:0018037 CHEBI:15705 ! is substitutent group from L-alpha-amino acid [Term] id: CHEBI:8337 name: porphyrin -subset: 3_STAR -synonym: "21H,23H-Porphin" RELATED [NIST_Chemistry_WebBook] -synonym: "21H,23H-porphine" RELATED [NIST_Chemistry_WebBook] -synonym: "porphine" RELATED [ChemIDplus] -synonym: "Porphyrin" EXACT [KEGG_COMPOUND] -synonym: "porphyrin" EXACT IUPAC_NAME [IUPAC] -xref: Beilstein:1222991 {source="Beilstein"} -xref: Beilstein:36080 {source="Beilstein"} -xref: Beilstein:622855 {source="Beilstein"} -xref: CAS:101-60-0 {source="ChemIDplus", source="KEGG COMPOUND", source="NIST Chemistry WebBook"} -xref: Gmelin:205920 {source="Gmelin"} -xref: HMDB:HMDB0000839 -xref: KEGG:C05113 -xref: PMID:22735334 {source="Europe PMC"} -xref: Reaxys:1160988 {source="Reaxys"} -xref: Wikipedia:Porphyrin +subset: 3:STAR +synonym: "21H,23H-Porphin" RELATED [nist] +synonym: "21H,23H-porphine" RELATED [nist] +synonym: "porphine" RELATED [chemidplus] +synonym: "Porphyrin" RELATED [kegg.compound] +synonym: "porphyrin" EXACT IUPAC:NAME [IUPAC] +synonym: "porphyrin" RELATED IUPAC:NAME [iupac] +xref: beilstein:1222991 {source="beilstein"} +xref: beilstein:36080 {source="beilstein"} +xref: beilstein:622855 {source="beilstein"} +xref: cas:101-60-0 {source="cas"} +xref: gmelin:205920 {source="gmelin"} +xref: hmdb:HMDB0000839 {source="hmdb"} +xref: kegg.compound:C05113 {source="kegg.compound"} +xref: pubmed:22735334 {source="pubmed"} +xref: reaxys:1160988 {source="reaxys"} +xref: wikipedia.en:Porphyrin {source="wikipedia.en"} is_a: CHEBI:26214 ! porphyrins is_a: CHEBI:35794 ! tetrapyrrole fundamental parent relationship: RO:0000087 CHEBI:25212 ! has role metabolite @@ -13326,55 +13842,55 @@ relationship: RO:0000087 CHEBI:25212 ! has role metabolite id: CHEBI:83811 name: proteinogenic amino acid derivative def: "Any derivative of a proteinogenic amino acid resulting from reaction at an amino group, carboxy group, or a side-chain functional group, or from the replacement of any hydrogen by a heteroatom." [] -subset: 3_STAR -synonym: "canonical amino acid derivative" RELATED [ChEBI] -synonym: "canonical amino acid derivatives" RELATED [ChEBI] -synonym: "canonical amino-acid derivative" RELATED [ChEBI] -synonym: "canonical amino-acid derivatives" RELATED [ChEBI] -synonym: "proteinogenic amino acid derivatives" RELATED [ChEBI] -synonym: "proteinogenic amino-acid derivative" RELATED [ChEBI] -synonym: "proteinogenic amino-acid derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "canonical amino acid derivative" RELATED [chebi] +synonym: "canonical amino acid derivatives" RELATED [chebi] +synonym: "canonical amino-acid derivative" RELATED [chebi] +synonym: "canonical amino-acid derivatives" RELATED [chebi] +synonym: "proteinogenic amino acid derivatives" RELATED [chebi] +synonym: "proteinogenic amino-acid derivative" RELATED [chebi] +synonym: "proteinogenic amino-acid derivatives" RELATED [chebi] is_a: CHEBI:83821 ! amino-acid derivative -relationship: has_functional_parent CHEBI:83813 ! proteinogenic amino acid +relationship: RO:0018038 CHEBI:83813 ! has functional parent proteinogenic amino acid [Term] id: CHEBI:83812 name: non-proteinogenic amino acid derivative def: "Any derivative of a non-proteinogenic amino acid resulting from reaction at an amino group or carboxy group, or from the replacement of any hydrogen by a heteroatom." [] -subset: 3_STAR -synonym: "non-canonical amino acid derivative" RELATED [ChEBI] -synonym: "non-canonical amino-acid derivatives" RELATED [ChEBI] -synonym: "non-proteinogenic amino-acid derivatives" RELATED [ChEBI] +subset: 3:STAR +synonym: "non-canonical amino acid derivative" RELATED [chebi] +synonym: "non-canonical amino-acid derivatives" RELATED [chebi] +synonym: "non-proteinogenic amino-acid derivatives" RELATED [chebi] is_a: CHEBI:83821 ! amino-acid derivative [Term] id: CHEBI:83813 name: proteinogenic amino acid -def: "Any of the 23 alpha-amino acids that are precursors to proteins, and are incorporated into proteins during translation. The group includes the 20 amino acids encoded by the nuclear genes of eukaryotes together with selenocysteine, pyrrolysine, and N-formylmethionine. Apart from glycine, which is non-chiral, all have L configuration." [] -subset: 3_STAR -synonym: "canonical amino acid" RELATED [ChEBI] -synonym: "canonical amino acids" RELATED [ChEBI] -synonym: "proteinogenic amino acids" RELATED [ChEBI] -xref: Wikipedia:Proteinogenic_amino_acid +def: "Any of the 23 α-amino acids that are precursors to proteins, and are incorporated into proteins during translation. The group includes the 20 amino acids encoded by the nuclear genes of eukaryotes together with selenocysteine, pyrrolysine, and N-formylmethionine. Apart from glycine, which is non-chiral, all have L configuration." [] +subset: 3:STAR +synonym: "canonical amino acid" RELATED [chebi] +synonym: "canonical amino acids" RELATED [chebi] +synonym: "proteinogenic amino acids" RELATED [chebi] +xref: wikipedia.en:Proteinogenic_amino_acid {source="wikipedia.en"} is_a: CHEBI:33709 ! amino acid [Term] id: CHEBI:83820 name: non-proteinogenic amino acid def: "Any amino-acid that is not naturally encoded in the genetic code of any organism." [] -subset: 3_STAR -synonym: "non-canonical amino acid" RELATED [ChEBI] -synonym: "non-canonical amino acids" RELATED [ChEBI] -synonym: "non-canonical amino-acid" RELATED [ChEBI] -synonym: "non-canonical amino-acids" RELATED [ChEBI] -synonym: "non-coded amino acid" RELATED [ChEBI] -synonym: "non-coded amino acids" RELATED [ChEBI] -synonym: "non-coded amino-acid" RELATED [ChEBI] -synonym: "non-coded amino-acids" RELATED [ChEBI] -synonym: "non-proteinogenic amino acids" RELATED [ChEBI] -synonym: "non-proteinogenic amino-acid" RELATED [ChEBI] -synonym: "non-proteinogenic amino-acids" RELATED [ChEBI] -xref: Wikipedia:Non-proteinogenic_amino_acids +subset: 3:STAR +synonym: "non-canonical amino acid" RELATED [chebi] +synonym: "non-canonical amino acids" RELATED [chebi] +synonym: "non-canonical amino-acid" RELATED [chebi] +synonym: "non-canonical amino-acids" RELATED [chebi] +synonym: "non-coded amino acid" RELATED [chebi] +synonym: "non-coded amino acids" RELATED [chebi] +synonym: "non-coded amino-acid" RELATED [chebi] +synonym: "non-coded amino-acids" RELATED [chebi] +synonym: "non-proteinogenic amino acids" RELATED [chebi] +synonym: "non-proteinogenic amino-acid" RELATED [chebi] +synonym: "non-proteinogenic amino-acids" RELATED [chebi] +xref: wikipedia.en:Non-proteinogenic_amino_acids {source="wikipedia.en"} is_a: CHEBI:33709 ! amino acid [Term] @@ -13382,39 +13898,40 @@ id: CHEBI:83821 name: amino-acid derivative alt_id: CHEBI:25359 def: "Any derivative of an amino acid resulting from reaction at an amino group, carboxy group, side-chain functional group, or from the replacement of any hydrogen by a heteroatom. The definition normally excludes peptides containing amino acid residues." [] -subset: 3_STAR -synonym: "amino acid derivative" RELATED [ChEBI] -synonym: "amino acid derivatives" RELATED [ChEBI] -synonym: "amino-acid derivatives" RELATED [ChEBI] -synonym: "modified amino acids" RELATED [ChEBI] +subset: 3:STAR +synonym: "amino acid derivative" RELATED [chebi] +synonym: "amino acid derivatives" RELATED [chebi] +synonym: "amino-acid derivatives" RELATED [chebi] +synonym: "modified amino acids" RELATED [chebi] is_a: CHEBI:35352 ! organonitrogen compound [Term] id: CHEBI:83822 name: non-proteinogenic L-alpha-amino acid -def: "Any L-alpha-amino acid which is not a member of the group of 23 proteinogenic amino acids." [] -subset: 3_STAR -synonym: "non-proteinogenic L-alpha-amino acids" RELATED [ChEBI] +def: "Any L-α-amino acid which is not a member of the group of 23 proteinogenic amino acids." [] +subset: 3:STAR +synonym: "non-proteinogenic L-alpha-amino acids" RELATED [chebi] is_a: CHEBI:15705 ! L-alpha-amino acid is_a: CHEBI:83925 ! non-proteinogenic alpha-amino acid [Term] id: CHEBI:8386 name: pregnane -subset: 3_STAR -synonym: "pregnane" EXACT IUPAC_NAME [IUPAC] -xref: LIPID_MAPS_instance:LMST02030000 {source="LIPID MAPS"} -xref: Wikipedia:Pregnane +subset: 3:STAR +synonym: "pregnane" EXACT IUPAC:NAME [IUPAC] +synonym: "pregnane" RELATED IUPAC:NAME [iupac] +xref: lipidmaps:LMST02030000 {source="lipidmaps"} +xref: wikipedia.en:Pregnane {source="wikipedia.en"} is_a: CHEBI:35508 ! steroid fundamental parent [Term] id: CHEBI:83925 name: non-proteinogenic alpha-amino acid -def: "Any alpha-amino acid which is not a member of the group of 23 proteinogenic amino acids." [] -subset: 3_STAR -synonym: "non-proteinogenic alpha-amino acids" RELATED [ChEBI] -synonym: "non-proteinogenic alpha-amino-acid" RELATED [ChEBI] -synonym: "non-proteinogenic alpha-amino-acids" RELATED [ChEBI] +def: "Any α-amino acid which is not a member of the group of 23 proteinogenic amino acids." [] +subset: 3:STAR +synonym: "non-proteinogenic alpha-amino acids" RELATED [chebi] +synonym: "non-proteinogenic alpha-amino-acid" RELATED [chebi] +synonym: "non-proteinogenic alpha-amino-acids" RELATED [chebi] is_a: CHEBI:33704 ! alpha-amino acid is_a: CHEBI:83820 ! non-proteinogenic amino acid @@ -13422,8 +13939,8 @@ is_a: CHEBI:83820 ! non-proteinogenic amino acid id: CHEBI:84055 name: pentose phosphate def: "Any phospho sugar that is the phosphate derivative of pentose." [] -subset: 3_STAR -synonym: "pentose phosphates" RELATED [ChEBI] +subset: 3:STAR +synonym: "pentose phosphates" RELATED [chebi] is_a: CHEBI:33447 ! phospho sugar is_a: CHEBI:63409 ! pentose derivative @@ -13431,64 +13948,66 @@ is_a: CHEBI:63409 ! pentose derivative id: CHEBI:84087 name: human urinary metabolite def: "Any metabolite (endogenous or exogenous) found in human urine samples." [] -subset: 3_STAR -synonym: "human urinary metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "human urinary metabolites" RELATED [chebi] is_a: CHEBI:77746 ! human metabolite [Term] id: CHEBI:84124 name: D-tyrosine derivative -def: "A non-proteinogenic amino acid derivative resulting from reaction of D-tyrosine at the amino group or the carboxy group, or from the replacement of any hydrogen of D-tyrosine by a heteroatom." [] -subset: 3_STAR -synonym: "D-tyrosine derivatives" RELATED [ChEBI] +def: "A non-proteinogenic amino acid derivative resulting from reaction of D-tyrosine at the amino group or the carboxy group, or from the replacement of any hydrogen of D-tyrosine by a heteroatom." [] +subset: 3:STAR +synonym: "D-tyrosine derivatives" RELATED [chebi] is_a: CHEBI:62761 ! tyrosine derivative is_a: CHEBI:84143 ! D-phenylalanine derivative -relationship: has_functional_parent CHEBI:28479 ! D-tyrosine +relationship: RO:0018038 CHEBI:28479 ! has functional parent D-tyrosine [Term] id: CHEBI:84143 name: D-phenylalanine derivative -def: "A non-proteinogenic amino acid derivative resulting from reaction of D-phenylalanine at the amino group or the carboxy group, or from the replacement of any hydrogen of D-phenylalanine by a heteroatom." [] -subset: 3_STAR -synonym: "D-phenylalanine derivatives" RELATED [ChEBI] +def: "A non-proteinogenic amino acid derivative resulting from reaction of D-phenylalanine at the amino group or the carboxy group, or from the replacement of any hydrogen of D-phenylalanine by a heteroatom." [] +subset: 3:STAR +synonym: "D-phenylalanine derivatives" RELATED [chebi] is_a: CHEBI:25985 ! phenylalanine derivative is_a: CHEBI:83812 ! non-proteinogenic amino acid derivative -relationship: has_functional_parent CHEBI:16998 ! D-phenylalanine +relationship: RO:0018038 CHEBI:16998 ! has functional parent D-phenylalanine [Term] id: CHEBI:84144 name: L-phenylalanine derivative -def: "A proteinogenic amino acid derivative resulting from reaction of L-phenylalanine at the amino group or the carboxy group, or from the replacement of any hydrogen of L-phenylalanine by a heteroatom." [] -subset: 3_STAR -synonym: "L-phenylalanine derivatives" RELATED [ChEBI] +def: "A proteinogenic amino acid derivative resulting from reaction of L-phenylalanine at the amino group or the carboxy group, or from the replacement of any hydrogen of L-phenylalanine by a heteroatom." [] +subset: 3:STAR +synonym: "L-phenylalanine derivatives" RELATED [chebi] is_a: CHEBI:25985 ! phenylalanine derivative is_a: CHEBI:83811 ! proteinogenic amino acid derivative -relationship: has_functional_parent CHEBI:17295 ! L-phenylalanine +relationship: RO:0018038 CHEBI:17295 ! has functional parent L-phenylalanine [Term] id: CHEBI:84387 name: (1s,4s)-prephenic acid -def: "A prephenic acid having (1s,4s)-cis-configuration." [] -subset: 3_STAR -synonym: "(1s,4s)-1-(2-carboxy-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "cis-1-(2-carboxy-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylic acid" EXACT IUPAC_NAME [IUPAC] -synonym: "cis-1-Carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1-propanoic acid" RELATED [ChemIDplus] -synonym: "cis-prephenic acid" RELATED [ChEBI] -synonym: "Prephenic acid, cis" RELATED [ChemIDplus] -xref: CAS:126-49-8 {source="KEGG COMPOUND"} -xref: CAS:87664-40-2 {source="ChemIDplus"} -xref: KEGG:C00254 -xref: MetaCyc:PREPHENATE -xref: Reaxys:2698271 {source="Reaxys"} -xref: Wikipedia:Prephenic_acid +def: "A prephenic acid having (1s,4s)-cis-configuration." [] +subset: 3:STAR +synonym: "(1s,4s)-1-(2-carboxy-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "(1s,4s)-1-(2-carboxy-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylic acid" RELATED IUPAC:NAME [iupac] +synonym: "cis-1-(2-carboxy-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylic acid" EXACT IUPAC:NAME [IUPAC] +synonym: "cis-1-(2-carboxy-2-oxoethyl)-4-hydroxycyclohexa-2,5-diene-1-carboxylic acid" RELATED IUPAC:NAME [iupac] +synonym: "cis-1-Carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1-propanoic acid" RELATED [chemidplus] +synonym: "cis-prephenic acid" RELATED [chebi] +synonym: "Prephenic acid, cis" RELATED [chemidplus] +xref: cas:126-49-8 {source="cas"} +xref: cas:87664-40-2 {source="cas"} +xref: kegg.compound:C00254 {source="kegg.compound"} +xref: metacyc.compound:PREPHENATE {source="metacyc.compound"} +xref: reaxys:2698271 {source="reaxys"} +xref: wikipedia.en:Prephenic_acid {source="wikipedia.en"} is_a: CHEBI:16666 ! prephenic acid -relationship: is_conjugate_acid_of CHEBI:29934 ! (1s,4s)-prephenate(2-) +relationship: RO:0018034 CHEBI:29934 ! is protonated form of (1s,4s)-prephenate(2-) [Term] id: CHEBI:84729 name: hydroxyindoles def: "Any member of the class of indoles carrying at least one hydroxy group." [] -subset: 3_STAR +subset: 3:STAR is_a: CHEBI:24828 ! indoles is_a: CHEBI:33822 ! organic hydroxy compound @@ -13496,25 +14015,25 @@ is_a: CHEBI:33822 ! organic hydroxy compound id: CHEBI:84735 name: algal metabolite def: "Any eukaryotic metabolite produced during a metabolic reaction in algae including unicellular organisms like chlorella and diatoms to multicellular organisms like giant kelps and brown algae." [] -subset: 3_STAR -synonym: "algal metabolites" RELATED [ChEBI] +subset: 3:STAR +synonym: "algal metabolites" RELATED [chebi] is_a: CHEBI:75763 ! eukaryotic metabolite [Term] id: CHEBI:86327 name: antifungal drug def: "Any antifungal agent used to prevent or treat fungal infections in humans or animals." [] -subset: 3_STAR -synonym: "anti-fungal drug" RELATED [ChEBI] -synonym: "anti-fungal drugs" RELATED [ChEBI] -synonym: "anti-fungal medication" RELATED [ChEBI] -synonym: "anti-fungal medications" RELATED [ChEBI] -synonym: "antifungal drugs" RELATED [ChEBI] -synonym: "antifungal medication" RELATED [ChEBI] -synonym: "antifungal medications" RELATED [ChEBI] -synonym: "pharmaceutical fungicide" RELATED [ChEBI] -synonym: "pharmaceutical fungicides" RELATED [ChEBI] -xref: Wikipedia:Antifungal +subset: 3:STAR +synonym: "anti-fungal drug" RELATED [chebi] +synonym: "anti-fungal drugs" RELATED [chebi] +synonym: "anti-fungal medication" RELATED [chebi] +synonym: "anti-fungal medications" RELATED [chebi] +synonym: "antifungal drugs" RELATED [chebi] +synonym: "antifungal medication" RELATED [chebi] +synonym: "antifungal medications" RELATED [chebi] +synonym: "pharmaceutical fungicide" RELATED [chebi] +synonym: "pharmaceutical fungicides" RELATED [chebi] +xref: wikipedia.en:Antifungal {source="wikipedia.en"} is_a: CHEBI:35441 ! antiinfective agent is_a: CHEBI:35718 ! antifungal agent @@ -13522,44 +14041,45 @@ is_a: CHEBI:35718 ! antifungal agent id: CHEBI:87518 name: ADP(2-) def: "An organophosphate oxoanion obtained by deprotonation of two of the three diphosphate OH groups of adenosine 5'-diphosphate." [] -subset: 3_STAR -synonym: "5'-O-{[(hydroxyphosphinato)oxy]phosphinato}adenosine" EXACT IUPAC_NAME [IUPAC] -xref: Reaxys:7558006 {source="Reaxys"} +subset: 3:STAR +synonym: "5'-O-{[(hydroxyphosphinato)oxy]phosphinato}adenosine" EXACT IUPAC:NAME [IUPAC] +synonym: "5'-O-{[(hydroxyphosphinato)oxy]phosphinato}adenosine" RELATED IUPAC:NAME [iupac] +xref: reaxys:7558006 {source="reaxys"} is_a: CHEBI:58945 ! organophosphate oxoanion -relationship: is_conjugate_acid_of CHEBI:456216 ! ADP(3-) -relationship: is_conjugate_base_of CHEBI:16761 ! ADP +relationship: RO:0018033 CHEBI:16761 ! is deprotonated form of ADP +relationship: RO:0018034 CHEBI:456216 ! is protonated form of ADP(3-) [Term] id: CHEBI:90710 name: receptor modulator alt_id: CHEBI:189678 def: "A drug that acts as an antagonist, agonist, reverse agonist, or in some other fashion when interacting with cellular receptors." [] -subset: 3_STAR -synonym: "receptor modulators" RELATED [ChEBI] -xref: Wikipedia:Receptor_modulator +subset: 3:STAR +synonym: "receptor modulators" RELATED [chebi] +xref: wikipedia.en:Receptor_modulator {source="wikipedia.en"} is_a: CHEBI:23888 ! drug [Term] id: CHEBI:9937 name: vasopressin -def: "A family of cyclic nonapeptide hormones found in most mammals. Synthesised in the hypothalamus and stored in the post-pituitary, vasopressins play a key role in homeostasis, particularly in regulating the body's water content. Together with the similar neuropeptide oxytocin, they are believed to influence social cognition and behaviour." [] -subset: 3_STAR -synonym: "ADH" RELATED [KEGG_COMPOUND] -synonym: "Antidiuretic hormone" RELATED [KEGG_COMPOUND] -synonym: "arginine vasopressin" RELATED [ChEBI] -synonym: "argipressin" RELATED [ChEBI] -synonym: "AVP" RELATED [ChEBI] -synonym: "beta-Hypophamine" RELATED [ChemIDplus] -synonym: "Inyectable de vasopresina" RELATED INN [ChemIDplus] -synonym: "Solute injectable de vasopressine" RELATED INN [ChemIDplus] -synonym: "Vasopressin" EXACT [KEGG_COMPOUND] -synonym: "Vasopressini injectio" RELATED INN [ChemIDplus] -synonym: "VP" RELATED [KEGG_COMPOUND] -xref: CAS:11000-17-2 {source="ChemIDplus"} -xref: KEGG:C00840 -xref: KEGG:D00101 -xref: PMID:18988842 {source="Europe PMC"} -xref: PMID:20445498 {source="Europe PMC"} +def: "A family of cyclic nonapeptide hormones found in most mammals. Synthesised in the hypothalamus and stored in the post-pituitary, vasopressins play a key rôle in homeostasis, particularly in regulating the body's water content. Together with the similar neuropeptide oxytocin, they are believed to influence social cognition and behaviour." [] +subset: 3:STAR +synonym: "ADH" RELATED [kegg.compound] +synonym: "Antidiuretic hormone" RELATED [kegg.compound] +synonym: "arginine vasopressin" RELATED [chebi] +synonym: "argipressin" RELATED [chebi] +synonym: "AVP" RELATED [chebi] +synonym: "beta-Hypophamine" RELATED [chemidplus] +synonym: "Inyectable de vasopresina" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Solute injectable de vasopressine" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "Vasopressin" RELATED [kegg.compound] +synonym: "Vasopressini injectio" RELATED http://purl.obolibrary.org/obo/chebi/INN [chemidplus] +synonym: "VP" RELATED [kegg.compound] +xref: cas:11000-17-2 {source="cas"} +xref: kegg.compound:C00840 {source="kegg.compound"} +xref: kegg.drug:D00101 {source="kegg.drug"} +xref: pubmed:18988842 {source="pubmed"} +xref: pubmed:20445498 {source="pubmed"} is_a: CHEBI:24533 ! heterodetic cyclic peptide is_a: CHEBI:25905 ! peptide hormone @@ -13584,9 +14104,12 @@ is_a: UBERON:0000061 ! anatomical structure disjoint_from: GO:0031012 ! extracellular matrix disjoint_from: GO:0032991 ! protein-containing complex disjoint_from: GO:0043226 ! organelle +disjoint_from: GO:0044423 ! virion component relationship: has_part GO:0005634 {gci_filler="PATO:0001407", gci_relation="RO:0000053"} ! nucleus relationship: has_part GO:0005634 {gci_filler="PATO:0001908", gci_relation="RO:0000053"} ! nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism +property_value: editor_note "CL and GO definitions of cell differ based on inclusive or exclusive of cell wall, etc." xsd:string +property_value: editor_note "We struggled with this definition. We are worried about circularity. We also considered requiring the capability of metabolism." xsd:string [Term] id: CL:0000005 @@ -14926,7 +15449,7 @@ relationship: part_of UBERON:0002481 ! bone tissue [Term] id: CL:0000138 name: chondrocyte -def: "Skeletogenic cell that is terminally differentiated, secretes an avascular, GAG-rich matrix, is embedded in cartilage tissue matrix, retains the ability to divide, and develops from a chondroblast cell." [GO_REF:0000034, MESH:D019902] +def: "A skeletogenic cell that secretes a specialized, avascular, GAG-rich matrix, is embedded in cartilage tissue matrix, retains the ability to divide, and develops from a chondroblast cell." [GO_REF:0000034, MESH:D019902, PMID:32491508] subset: cellxgene_subset synonym: "cartilage cell" EXACT [] xref: BTO:0000249 @@ -14935,6 +15458,7 @@ xref: FMA:66782 xref: ZFA:0009084 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} is_a: CL:0000153 ! glycosaminoglycan secreting cell is_a: CL:0000667 ! collagen secreting cell +is_a: CL:0007001 ! skeletogenic cell relationship: develops_from CL:0000058 ! chondroblast relationship: located_in UBERON:0002418 ! cartilage tissue @@ -15544,6 +16068,7 @@ is_a: CL:0000006 ! neuronal receptor cell id: CL:0000199 name: mechanoreceptor cell def: "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system." [MESH:D008465] +subset: cellxgene_subset synonym: "mechanoreceptor" RELATED [MP:0000972] xref: ZFA:0009120 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} is_a: CL:0000101 ! sensory neuron @@ -15726,6 +16251,7 @@ property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_0000222" id: CL:0000223 name: endodermal cell def: "A cell of the inner of the three germ layers of the embryo." [MESH:D004707] +subset: cellxgene_subset synonym: "endoderm cell" EXACT [] xref: FMA:72555 xref: ZFA:0009139 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -16169,6 +16695,7 @@ relationship: develops_from CL:0007004 ! premigratory neural crest cell id: CL:0000335 name: mesenchyme condensation cell def: "A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors." [GOC:tfm, PMID:5025404] +subset: cellxgene_subset xref: ZFA:0009166 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} is_a: CL:0008019 ! mesenchymal cell @@ -16190,6 +16717,7 @@ relationship: part_of UBERON:0001236 ! adrenal medulla id: CL:0000339 name: glioblast (sensu Vertebrata) def: "An early neural cell developing from the early ependymal cell of the neural tube." [GOC:tfm, ISBN:0618947256] +subset: cellxgene_subset synonym: "spongioblast" EXACT [] xref: FMA:70564 xref: ZFA:0009169 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -17016,6 +17544,7 @@ property_value: seeAlso "https://github.com/obophenotype/cell-ontology/issues/21 id: CL:0000526 name: afferent neuron def: "A neuron which conveys sensory information centrally from the periphery." [GOC:tfm, MESH:D009475] +subset: cellxgene_subset subset: human_reference_atlas synonym: "input neuron" EXACT [] xref: FMA:87653 @@ -18221,6 +18750,7 @@ relationship: part_of UBERON:0002069 ! stratum granulosum of epidermis id: CL:0000723 name: somatic stem cell def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:0048103] +subset: cellxgene_subset xref: CALOHA:TS-2086 xref: MESH:D053687 xref: ZFA:0009307 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -18310,6 +18840,23 @@ relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: RO:0002100 UBERON:0000966 ! has soma location retina property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_0000740" xsd:string {name="retinal ganglion cell on CELLxGENE CellGuide"} +[Term] +id: CL:0000743 +name: hypertrophic chondrocyte +def: "A chondrocyte that is part of the hypertrophic cartilage zone. This cell is significantly enlarged and characterised by high expression of type X collagen (COL10A1) in both humans and mice. It actively coordinates endochondral ossification by mineralising the extracellular matrix, attracting blood vessels via angiogenic signalling, and mediating the transition from cartilage to bone - often by transdifferentiating into an osteoblast rather than undergoing apoptosis." [GO_REF:0000034, PMID:15951842, PMID:25321476, PMID:35179487] +comment: Despite historical descriptions as 'terminally differentiated,' hypertrophic chondrocytes survive and transdifferentiate into osteoblasts. Genetic lineage tracing shows that hypertrophic chondrocytes do not simply undergo apoptosis but cross the cartilage–bone boundary, dedifferentiate into skeletal stem/progenitor cells, and then redifferentiate into osteoblasts and osteocytes. Single-cell RNA-seq further indicates that these chondrocyte-derived SSPCs are a major source of trabecular osteoblasts and marrow adipocytes. {xref="PMID:35179487"} +subset: cellxgene_subset +subset: human_reference_atlas +xref: ZFA:0009313 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} +is_a: CL:0000138 ! chondrocyte +is_a: CL:0001035 ! bone cell +intersection_of: CL:0000138 ! chondrocyte +intersection_of: part_of UBERON:0008187 ! hypertrophic cartilage zone +relationship: capable_of GO:0001958 ! endochondral ossification +relationship: part_of UBERON:0008187 ! hypertrophic cartilage zone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +relationship: RO:0002292 PR:000005693 ! expresses collagen alpha-1(X) chain + [Term] id: CL:0000745 name: retina horizontal cell @@ -18385,12 +18932,16 @@ property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_0000748" id: CL:0000752 name: cone retinal bipolar cell def: "A bipolar neuron found in the retina and having connections with cone photoreceptor cells and neurons in the inner plexiform layer." [PMID:14689473] +comment: The marker set COL19A1, DOK5 can identify the Human cell type http://purl.obolibrary.org/obo/CL_0000752 in the retina with a confidence of 0.843060252 (NS-Forest FBeta value). {xref="https://doi.org/10.5281/zenodo.11165918"} subset: cellxgene_subset xref: ZFA:0009322 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} is_a: CL:0000748 ! retinal bipolar neuron intersection_of: CL:0000748 ! retinal bipolar neuron intersection_of: synapsed_by CL:0000573 ! retinal cone cell relationship: part_of RO:0002577 ! system +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +relationship: RO:0015004 CLM:1001241 ! has characterizing marker set +relationship: RO:0015004 CLM:1001261 ! has characterizing marker set relationship: synapsed_by CL:0000573 ! retinal cone cell [Term] @@ -19220,6 +19771,7 @@ is_a: CL:0000207 ! olfactory receptor cell id: CL:0000850 name: serotonergic neuron def: "A neuron that releases serotonin as a neurotransmitter." [SANBI:mhl] +subset: cellxgene_subset synonym: "5-HT neuron" EXACT [] synonym: "5-hydroxytryptamine neuron" EXACT [] synonym: "serotinergic neuron" RELATED [] @@ -19523,7 +20075,7 @@ synonym: "memory IgE B cell" EXACT [] synonym: "memory IgE B lymphocyte" EXACT [] synonym: "memory IgE B-cell" EXACT [] synonym: "memory IgE B-lymphocyte" EXACT [] -is_a: CL:0000972 {is_inferred="true"} ! class switched memory B cell +is_a: CL:4052108 ! IgD-negative class switched memory B cell intersection_of: CL:0000972 ! class switched memory B cell intersection_of: RO:0002104 GO:0071742 ! has plasma membrane part IgE immunoglobulin complex relationship: RO:0002104 GO:0071742 ! has plasma membrane part IgE immunoglobulin complex @@ -19868,7 +20420,7 @@ synonym: "memory IgA B cell" EXACT [] synonym: "memory IgA B lymphocyte" EXACT [] synonym: "memory IgA B-cell" EXACT [] synonym: "memory IgA B-lymphocyte" EXACT [] -is_a: CL:0000972 {is_inferred="true"} ! class switched memory B cell +is_a: CL:4052108 ! IgD-negative class switched memory B cell intersection_of: CL:0000972 ! class switched memory B cell intersection_of: RO:0002104 GO:0071745 ! has plasma membrane part IgA immunoglobulin complex relationship: RO:0002104 GO:0071745 ! has plasma membrane part IgA immunoglobulin complex @@ -20535,6 +21087,7 @@ property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_0001067" id: CL:0001072 name: CD34-negative, CD117-positive innate lymphoid cell, human def: "An innate lymphoid cell in the human with the phenotype CD34-negative, CD117-positive, and a precusor to NK cells, ILC2 cells, and ILC3 cells." [GOC:add, PMID:30193847, PMID:31201208] +subset: cellxgene_subset synonym: "CD34-negative, CD117-positive ILC" EXACT [] synonym: "CD34-negative, CD117-positive ILCP" EXACT [] synonym: "CD34-negative, CD117-positive innate lymphoid cell precusor" EXACT [] @@ -21889,8 +22442,8 @@ relationship: RO:0002104 GO:0071738 ! has plasma membrane part IgD immunoglobuli id: CL:0002107 name: IgD-negative CD38-positive IgG memory B cell def: "An IgD-negative CD38-positive IgG memory B cell is a CD38-positive IgG-positive that has class switched and lacks expression of IgD on the cell surface with the phenotype IgD-negative, CD38-positive, and IgG-positive." [GOC:dsd, GOC:rhs, GOC:tfm, PMID:20123131] -is_a: CL:0001053 ! IgD-negative memory B cell is_a: CL:0002105 {is_inferred="true"} ! CD38-positive IgG memory B cell +is_a: CL:4052108 ! IgD-negative class switched memory B cell intersection_of: CL:0002105 ! CD38-positive IgG memory B cell intersection_of: CL:4030046 GO:0071738 ! lacks_plasma_membrane_part IgD immunoglobulin complex relationship: CL:4030046 GO:0071738 ! lacks_plasma_membrane_part IgD immunoglobulin complex @@ -21900,7 +22453,7 @@ id: CL:0002108 name: CD38-negative IgG memory B cell def: "A CD38-negative IgG memory B cell is a IgG-positive class switched memory B cell that has class switched and expresses IgG on the cell surface with the phenotype CD38-negative, IgD-negative, and IgG-positive." [GOC:dsd, GOC:rhs, GOC:tfm, PMID:20123131] is_a: CL:0000979 {is_inferred="true"} ! IgG memory B cell -is_a: CL:0001053 ! IgD-negative memory B cell +is_a: CL:4052108 ! IgD-negative class switched memory B cell intersection_of: CL:0000979 ! IgG memory B cell intersection_of: CL:4030046 GO:0071738 ! lacks_plasma_membrane_part IgD immunoglobulin complex intersection_of: CL:4030046 PR:000001408 ! lacks_plasma_membrane_part ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 @@ -22016,7 +22569,7 @@ synonym: "IgG- class switched memory B-lymphocyte" EXACT [] synonym: "IgG-negative class switched memory B lymphocyte" EXACT [] synonym: "IgG-negative class switched memory B-cell" EXACT [] synonym: "IgG-negative class switched memory B-lymphocyte" EXACT [] -is_a: CL:0000972 {is_inferred="true"} ! class switched memory B cell +is_a: CL:4052108 ! IgD-negative class switched memory B cell intersection_of: CL:0000972 ! class switched memory B cell intersection_of: CL:4030046 GO:0071735 ! lacks_plasma_membrane_part IgG immunoglobulin complex relationship: CL:4030046 GO:0071735 ! lacks_plasma_membrane_part IgG immunoglobulin complex @@ -23816,6 +24369,7 @@ creation_date: 2010-09-23T03:46:34Z id: CL:0002367 name: trabecular meshwork cell def: "An ocular connective tissue cell that is part of the eye's trabecular meshwork and is directly responsible for regulating the outflow of aqueous humor from the anterior chamber of the eye, thereby maintaining proper intraocular pressure." [GOC:tfm, PMID:14500801, PMID:40136401] +subset: cellxgene_subset synonym: "trabeculocyte" EXACT [] is_a: CL:0002320 {is_inferred="true"} ! connective tissue cell intersection_of: CL:0002320 ! connective tissue cell @@ -24701,6 +25255,7 @@ creation_date: 2011-02-28T05:05:33Z id: CL:0002552 name: fibroblast of gingiva def: "Any fibroblast that is part of some gingiva." [FBC:Autogenerated] +subset: cellxgene_subset is_a: CL:0000057 {is_inferred="true"} ! fibroblast intersection_of: CL:0000057 ! fibroblast intersection_of: part_of UBERON:0001828 ! gingiva @@ -24917,6 +25472,7 @@ creation_date: 2011-03-02T01:19:27Z id: CL:0002574 name: stromal cell of pancreas def: "A stromal cell of the pancreas." [GOC:tfm] +subset: cellxgene_subset subset: human_reference_atlas is_a: CL:0000499 {is_inferred="true"} ! stromal cell intersection_of: CL:0000499 ! stromal cell @@ -25591,6 +26147,7 @@ id: CL:0002652 name: endothelial cell of high endothelial venule def: "A venule endothelial cell that is cubodial, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream." [GOC:tfm, PMID:20726857] comment: Markers expressed on HEV include: MAdCAM-1,PNAd (sulfated and glycosylated molecules, i.e. GlyCAM-1, CD34, endomucin, nepmucin), ICAM-1, ICAM-2,Fuc-TVII, beta 3GlcNAcT-3, GlcNAc6ST2,CCL21, CCL19, CXCL13, CXCL12, Autotaxin, DARC, angiomodulin, LRHG. +subset: cellxgene_subset subset: human_reference_atlas synonym: "endothelial cell of postcapillary venule of lymph node" BROAD [] synonym: "HEV cell" EXACT [] @@ -26434,6 +26991,7 @@ relationship: part_of UBERON:0000018 ! compound eye id: CL:0009004 name: retinal cell def: "Any cell in the retina, the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates." [GOC:pr] +subset: cellxgene_subset xref: PMID:10702418 is_a: CL:0002319 ! neural cell intersection_of: CL:0002319 ! neural cell @@ -27613,6 +28171,7 @@ property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_0011005" id: CL:0011007 name: paraxial cell def: "A cell in the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites." [GOC:NV, PMID:11687492] +subset: cellxgene_subset synonym: "paraxial mesoderm cell" EXACT [] synonym: "presomitic mesoderm cell" NARROW [] synonym: "somitic mesoderm cell" EXACT [] @@ -27837,6 +28396,7 @@ property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_0017000" id: CL:0017002 name: prostate neuroendocrine cell def: "A neuroendocrine cell that is part of the prostate epithelium." [http://orcid.org/0000-0001-7772-9578, PMID:33842835] +subset: cellxgene_subset subset: human_reference_atlas synonym: "neuroendocrine cell of prostate epithelium" EXACT [] synonym: "neuroendocrine cell of the prostate" EXACT [] @@ -28177,6 +28737,18 @@ intersection_of: part_of UBERON:0006005 ! hair follicle isthmus relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 relationship: part_of UBERON:0006005 ! hair follicle isthmus +[Term] +id: CL:0020021 +name: fibrochondrocyte progenitor cell +def: "A mesenchymal progenitor cell located in fibrocartilaginous tissues, along the fibrochondrocytic differentiation pathway that co-expresses both fibrochondrocyte markers (COL1A1, COL3A1) and mesenchymal stem cell markers (MCAM/CD146, MYLK) in humans. This cell serves as a progenitor for mature fibrochondrocytes and other meniscal cell types, with differentiation regulated by TGF-β signaling, focal adhesion, and extracellular matrix-receptor interaction pathways." [PMID:31871141, PMID:36338137] +comment: A fibrochondrocyte progenitor cell demonstrates colony-forming capacity and multi-lineage differentiation potential toward osteogenic and adipogenic lineages. {xref="PMID:31871141"} +synonym: "FCP" RELATED OMO:0003000 [PMID:31871141] +is_a: CL:0002320 ! connective tissue cell +is_a: CL:0008019 ! mesenchymal cell +is_a: CL:0011026 ! progenitor cell +relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 +relationship: part_of UBERON:0001995 ! fibrocartilage + [Term] id: CL:1000001 name: retrotrapezoid nucleus neuron @@ -28222,6 +28794,7 @@ relationship: part_of UBERON:0008906 ! lateral line nerve id: CL:1000073 name: spinal cord radial glial cell def: "Any radial glial cell that is part of some spinal cord." [FBC:Autogenerated] +subset: cellxgene_subset is_a: CL:0000681 ! radial glial cell intersection_of: CL:0000681 ! radial glial cell intersection_of: part_of UBERON:0002240 ! spinal cord @@ -28241,6 +28814,7 @@ relationship: part_of UBERON:0005310 ! pronephric nephron tubule id: CL:1000123 name: metanephric nephron tubule epithelial cell def: "Any epithelial cell that is part of some metanephric nephron tubule." [FBC:Autogenerated] +subset: cellxgene_subset is_a: CL:1000449 ! epithelial cell of nephron is_a: CL:1000507 ! kidney tubule cell intersection_of: CL:0000066 ! epithelial cell @@ -28549,6 +29123,7 @@ property_value: seeAlso "https://cellxgene.cziscience.com/cellguide/CL_1000296" id: CL:1000298 name: mesothelial cell of dura mater def: "A mesothelial cell that is part of the dura mater." [GOC:tfm] +subset: cellxgene_subset synonym: "squamous mesothelial cell of dura mater" EXACT [FMA:256516] xref: FMA:256516 is_a: CL:0000077 ! mesothelial cell @@ -32339,6 +32914,7 @@ id: CL:2000066 name: cardiac ventricle fibroblast def: "Any fibroblast that is part of a cardiac ventricle." [GOC:TermGenie] comment: http://www.sciencellonline.com/site/productInformation.php?keyword=6310 +subset: cellxgene_subset subset: human_reference_atlas is_a: CL:0002548 ! fibroblast of cardiac tissue intersection_of: CL:0000057 ! fibroblast @@ -32865,6 +33441,7 @@ relationship: RO:0002100 UBERON:0001885 ! has soma location dentate gyrus of hip id: CL:4023063 name: medial ganglionic eminence derived interneuron def: "An interneuron that is derived from the medial ganglionic eminence." [DOI:10.1101/2022.10.12.511898] +subset: cellxgene_subset subset: human_reference_atlas synonym: "MGE interneuron" EXACT [] is_a: CL:0000099 ! interneuron @@ -33146,6 +33723,7 @@ property_value: dcterms-date "2022-05-10T13:14:00Z" xsd:dateTime id: CL:4030010 name: epithelial cell of proximal tubule segment 2 def: "A brush border cell that is part of segment 2 (S2) of the proximal tubule epithelium, located in the renal cortex. In addition to its reabsorptive functions, it is also specialized in the secretion of organic anions and cations, including para-aminohippurate." [PMID:23799132, PMID:23897681, PMID:31249312, PMID:31253652] +subset: cellxgene_subset subset: human_reference_atlas synonym: "epithelial cell of segment 2 of proximal tubule" EXACT [] is_a: CL:1000838 ! kidney proximal convoluted tubule epithelial cell @@ -33194,6 +33772,7 @@ property_value: dcterms-date "2022-05-13T11:00:29Z" xsd:dateTime id: CL:4030016 name: epithelial cell of early distal convoluted tubule def: "An epithelial cell located in the early distal convoluted tubule." [http://orcid.org/0000-0003-2804-127X, PMID:24855283] +subset: cellxgene_subset subset: human_reference_atlas synonym: "DCT1 cell" BROAD [PMID:24855283] is_a: CL:1000849 ! kidney distal convoluted tubule epithelial cell @@ -33310,6 +33889,7 @@ property_value: dcterms-date "2022-11-04T14:40:00Z" xsd:dateTime id: CL:4030031 name: interstitial cell def: "Any cell that is located within the interstitium between the cells most prominent in defining a given tissue. \"Interstitial cell\" is a morphological term and refers to a variety of cells with differing origins and phenotypes." [PMID:24987007] +subset: cellxgene_subset is_a: CL:0000255 ! eukaryotic cell intersection_of: CL:0000000 ! cell intersection_of: part_of UBERON:0005169 ! interstitial tissue @@ -33532,6 +34112,7 @@ relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens id: CL:4033010 name: neuroendocrine cell of epithelium of lobar bronchus def: "A(n) neuroendocrine cell that is part of a(n) epithelium of lobar bronchus." [PMID:26711336, PMID:33355253] +subset: cellxgene_subset subset: human_reference_atlas is_a: CL:0000082 ! epithelial cell of lung is_a: CL:0002328 ! bronchial epithelial cell @@ -33968,6 +34549,7 @@ id: CL:4040003 name: fetal pre-type II pulmonary alveolar epithelial cell def: "Precursor of type II pneumocyte. These cells do not have lamellar bodies, which are a marker of type II pneumocyte maturity." [PMID:1316350] comment: According to PMID:1316350 this cell type does not yet produce surfactant. According to PMID:9109447 and PMID:12114192 this cell type produces low levels of surfactant that can be increased by administration of very low-density lipoproteins. This cell type is of medical relevance, as a central feature of the fetal respiratory distress syndrome seems to be the presence in the lung of abundant pre-type II alveolar epithelial cells (PMID:1316350). +subset: cellxgene_subset synonym: "fetal alveolar pre-type II epithelial cell" EXACT [PMID:9624168] synonym: "fetal pre-type 2 pneumocyte" EXACT [https://orcid.org/0000-0002-0819-0473] synonym: "fetal pre-type II alveolar epithelial cell" EXACT [PMID:12114192] @@ -34198,6 +34780,7 @@ property_value: dcterms-date "2024-09-20T12:13:26Z" xsd:dateTime id: CL:4052010 name: pre-theca cell def: "A stromal cell that serves as a precursor to the theca cell layers in the ovary growing follicles. This cell is present in the early stages of follicular growth, particularly in smaller follicles. Unlike mature theca cell, a pre-theca cell is initially non-steroidogenic and lacks luteinizing hormone receptors." [PMID:20628033, PMID:31320652, PMID:36205477] +subset: cellxgene_subset synonym: "early theca cell" EXACT [PMID:36205477] synonym: "progenitor theca cell" EXACT [PMID:31320652] is_a: CL:0002132 ! stromal cell of ovary @@ -34339,6 +34922,7 @@ property_value: dcterms-date "2024-10-22T12:02:23Z" xsd:dateTime id: CL:4052025 name: neuromuscular junction nucleus def: "A specialized muscle nucleus that is part of an extrafusal muscle fiber, clustered at the postsynaptic side of the neuromuscular junction. This nucleus exhibits a distinct transcriptional profile, including acetylcholine receptor (AChR) subunit genes. It regulates the production of proteins essential for maintaining the structure and function of the neuromuscular junction, supporting efficient nerve-muscle signaling for muscle contraction." [PMID:33037211, PMID:33311457, PMID:33311464] +subset: cellxgene_subset synonym: "neuromuscular junction myonuclei" EXACT OMO:0003004 [PMID:33311464] synonym: "neuromuscular junction nuclei" EXACT OMO:0003004 [PMID:33311457] synonym: "NMJ nuclues" RELATED OMO:0003000 [] @@ -34370,6 +34954,7 @@ id: CL:4052030 name: adventitial fibroblast def: "A fibroblast of the adventitia of a blood vessel. This cell contributes to vascular homeostasis, remodeling, and inflammation by producing extracellular matrix components, cytokines, and growth factors. Adventitial fibroblast can transition into an activated state during injury or disease, marked by increased proliferation, migration, matrix deposition, and contractile protein expression" [PMID:28705796, PMID:36718802] comment: Single-cell transcriptomics of murine aorta identifies two adventitial fibroblast-specific markers, PDGFRA and DPEP1, which were validated at the protein level by immunohistochemistry and flow cytometry across human and murine arteries, highlighting fibroblast heterogeneity in health and cardiovascular disease (CVD) in humans and mice. {xref="PMID:36718802"} +subset: cellxgene_subset is_a: CL:0000057 ! fibroblast is_a: CL:0000151 ! secretory cell is_a: CL:0002503 ! adventitial cell @@ -34531,6 +35116,7 @@ property_value: dcterms-date "2025-03-05T13:37:44Z" xsd:dateTime id: CL:4052049 name: striated cell of salivary gland def: "An columnar/cuboidal epithelial cell that is part of the striated duct of salivary gland, characterized by basal striations formed by infoldings of the plasma membrane. This cell play a crucial role in modifying the electrolyte composition and concentration of saliva through active ion transport, particularly the absorption of sodium and secretion of potassium." [PMID:30855909, PMID:34147989, PMID:36726292] +subset: cellxgene_subset subset: human_reference_atlas synonym: "SD cells" BROAD [PMID:11590591] synonym: "striated duct cells" BROAD [PMID:11590591] @@ -34640,6 +35226,18 @@ relationship: has_part GO:0098594 ! mucin granule relationship: part_of UBERON:0014717 ! mucous acinus property_value: dcterms-date "2025-08-05T15:33:46Z" xsd:dateTime +[Term] +id: CL:4052108 +name: IgD-negative class switched memory B cell +def: "A class switched memory B cell that lacks IgD on the cell surface." [PMID:20839340, PMID:32741082, PMID:36617261, PMID:37254600] +is_a: CL:0000972 ! class switched memory B cell +is_a: CL:0001053 ! IgD-negative memory B cell +intersection_of: CL:0000972 ! class switched memory B cell +intersection_of: CL:4030046 GO:0071738 ! lacks_plasma_membrane_part IgD immunoglobulin complex +relationship: CL:4030046 GO:0071738 ! lacks_plasma_membrane_part IgD immunoglobulin complex +relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 +property_value: dcterms-date "2025-12-08T10:33:49Z" xsd:dateTime + [Term] id: CL:4072102 name: Purkinje layer interneuron @@ -34666,6 +35264,23 @@ relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 relationship: part_of UBERON:0002073 ! hair follicle creation_date: 2025-11-05T11:49:53Z +[Term] +id: CL:4072104 +name: fibrochondrocyte +def: "A chondrocyte with hybrid fibroblastic-chondrogenic characteristics found in fibrocartilage, particularly in the avascular inner zone and transitional middle zone of the meniscus. In humans, fibrochondrocytes are marked by predominant expression of type I collagen (COL1A1) and fibril-associated collagens (COL3A1, COL6A1), while retaining type II collagen (COL2A1) expression and exhibiting lower SOX9 than hyaline chondrocytes. This molecular profile underlies the synthesis of abundant type I collagen essential for fibrocartilage matrix and reflects an intermediate phenotype between fibroblast and chondrocyte." [PMID:28939894, PMID:31871141, PMID:34608249] +synonym: "FC" RELATED OMO:0003000 [PMID:31871141] +synonym: "fibrocartilage chondrocyte" EXACT [PMID:34608249] +synonym: "meniscus fibrochondrocyte" NARROW [PMID:28939894] +is_a: CL:0000138 ! chondrocyte +intersection_of: CL:0000138 ! chondrocyte +intersection_of: part_of UBERON:0001995 ! fibrocartilage +relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 +relationship: develops_from CL:0020021 ! fibrochondrocyte progenitor cell +relationship: part_of UBERON:0001995 ! fibrocartilage +relationship: RO:0002292 PR:000003264 ! expresses collagen alpha-1(I) chain +relationship: RO:0002292 PR:000003328 ! expresses collagen alpha-1(III) chain +relationship: RO:0002292 PR:000003353 ! expresses collagen alpha-1(VI) chain + [Term] id: CL:7770004 name: suprabasal cell @@ -34674,6 +35289,49 @@ is_a: CL:0000066 ! epithelial cell relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 property_value: dcterms-date "2025-09-05T07:59:28Z" xsd:dateTime +[Term] +id: COB:0000011 +name: atom +def: "A material entity consisting of exactly one atomic nucleus and the electron(s) orbiting it." [] +is_a: BFO:0000040 ! material entity +disjoint_from: COB:0000013 ! molecule +relationship: has_part CHEBI:33252 ! atomic nucleus +property_value: editor_note "This atom is closely related to ChEBI's atom, but not exactly equivalent to." xsd:string + +[Term] +id: COB:0000013 +name: molecule +def: "A material entity that consists of two or more atoms that are all connected via covalent bonds such that any atom can be transitively connected with any other atom." [] +is_a: BFO:0000040 ! material entity +relationship: has_part COB:0000011 ! atom +property_value: editor_note "This molecular entity is different than ChEBI's 'molecular entity'." xsd:string +property_value: editor_note "We would like to have cardinality restrictions on the logic, but there are some technical limitations." xsd:string + +[Term] +id: COB:0000021 +name: gross anatomical part +def: "A part of a multicellular organism that is a collection of cell components that are not all contained in one cell." [] +is_a: UBERON:0000465 ! material anatomical entity + +[Term] +id: COB:0000022 +name: organism +def: "A material entity that is a maximal functionally integrated unit that develops from a program encoded in a genome" [] +is_a: UBERON:0000465 ! material anatomical entity +property_value: editor_note "'Maximal functionally integrated unit' is intended to express unity, which Barry considers synonymous with BFO 'object'." xsd:string +property_value: editor_note "Includes virus - we will later have a class for cellular organisms." xsd:string + +[Term] +id: COB:0000080 +name: complex of molecules +def: "A complex of two or more molecules that are not covalently bound." [] +is_a: BFO:0000040 ! material entity +relationship: has_part COB:0000013 ! molecule + +[Term] +id: COB:0000502 +name: characteristic + [Term] id: GO:0000011 name: vacuole inheritance @@ -34892,7 +35550,7 @@ def: "A ribosome contained within a subcellular membrane-bounded organelle." [GO is_a: GO:0005840 ! ribosome intersection_of: GO:0005840 ! ribosome intersection_of: part_of GO:0043226 ! organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0043226 ! organelle [Term] @@ -34900,7 +35558,7 @@ id: GO:0000323 name: lytic vacuole def: "A vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases." [GOC:krc] is_a: GO:0005773 ! vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0000578 @@ -34909,7 +35567,7 @@ def: "The establishment, maintenance and elaboration of a pattern along a line o synonym: "embryonic axis determination" RELATED [] is_a: GO:0009798 ! axis specification is_a: GO:0009880 ! embryonic pattern specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -34964,8 +35622,8 @@ synonym: "chromosome scaffold" RELATED [] synonym: "cytoplasmic chromatin" NARROW [] synonym: "nuclear chromatin" NARROW [] xref: NIF_Subcellular:sao1615953555 -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005694 ! chromosome property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28301" xsd:anyURI @@ -34980,7 +35638,7 @@ synonym: "transcriptionally active chromatin" EXACT [] xref: NIF_Subcellular:sao445485807 xref: Wikipedia:Euchromatin is_a: GO:0000785 ! chromatin -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/22355" xsd:anyURI [Term] @@ -34995,7 +35653,7 @@ synonym: "transcriptionally silent chromatin" EXACT [] xref: NIF_Subcellular:sao581845896 xref: Wikipedia:Heterochromatin is_a: GO:0000785 ! chromatin -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/22355" xsd:anyURI [Term] @@ -35019,7 +35677,7 @@ synonym: "cellular morphogenesis" EXACT [] is_a: GO:0009653 ! anatomical structure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: RO:0002298 CL:0000000 ! results in morphogenesis of cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002298 CL:0000000 ! results in morphogenesis of cell [Term] @@ -35227,7 +35885,7 @@ is_a: GO:0040008 ! regulation of growth is_a: GO:0051128 ! regulation of cellular component organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0016049 ! regulates (processual) cell growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0016049 ! regulates (processual) cell growth [Term] @@ -35246,7 +35904,7 @@ synonym: "regulation of growth by external stimulus" EXACT [] is_a: GO:0001558 ! regulation of cell growth intersection_of: GO:0001558 ! regulation of cell growth intersection_of: part_of GO:0051716 ! cellular response to stimulus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0051716 ! cellular response to stimulus [Term] @@ -35291,7 +35949,7 @@ name: microtubule bundle formation def: "A process that results in a parallel arrangement of microtubules." [GOC:dph] synonym: "microtubule bundling" EXACT [] is_a: GO:0000226 ! microtubule cytoskeleton organization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0000057 GO:0005874 ! has participant microtubule relationship: RO:0002297 GO:0097427 ! results in formation of anatomical entity microtubule bundle @@ -35561,7 +36219,7 @@ synonym: "translation initiation ternary complex assembly" EXACT [] is_a: GO:0022618 ! protein-RNA complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0044207 ! results in assembly of translation initiation ternary complex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006413 ! translational initiation relationship: RO:0002588 GO:0044207 ! results in assembly of translation initiation ternary complex @@ -35575,7 +36233,7 @@ is_a: GO:0042593 ! glucose homeostasis is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:4167 ! regulates levels of D-glucopyranose -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:4167 ! regulates levels of D-glucopyranose [Term] @@ -35775,7 +36433,7 @@ relationship: RO:0002296 UBERON:6001059 ! results in development of insect visua id: GO:0001750 name: photoreceptor outer segment def: "The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins." [GOC:cilia, GOC:krc, GOC:pde, ISBN:0824072820, PMID:19501669, PMID:26574505, PMID:6771304] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0097733 ! photoreceptor cell cilium @@ -36709,7 +37367,7 @@ id: GO:0001917 name: photoreceptor inner segment def: "The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs." [GOC:add, PMID:12019563] subset: goslim_pir -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of CL:0000210 ! photoreceptor cell @@ -37690,7 +38348,7 @@ id: GO:0002117 name: amphibian larval development def: "The process whose specific outcome is the progression of the amphibian larva over time, from its formation to the mature structure. Amphibian larvae, sometimes called pollywogs or tadpoles, hatch from eggs and begin to grow limbs and other adult physical features at various times, depending on the species, before they metamorphose into the adult form." [GOC:bf, PMID:27143402] is_a: GO:0002164 ! larval development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -37738,7 +38396,7 @@ name: larval development def: "The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters." [GOC:jid, ISBN:0877795088] is_a: GO:0007275 ! multicellular organism development is_a: GO:0009791 ! post-embryonic development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -37785,7 +38443,7 @@ subset: goslim_yeast is_a: GO:0006412 ! translation intersection_of: GO:0006412 ! translation intersection_of: RO:0002608 GO:0022626 ! process has causal agent cytosolic ribosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002608 GO:0022626 ! process has causal agent cytosolic ribosome created_by: hjd creation_date: 2011-06-09T03:11:53Z @@ -37797,7 +38455,7 @@ def: "The successive addition of amino acid residues to a nascent polypeptide ch is_a: GO:0006414 ! translational elongation intersection_of: GO:0006414 ! translational elongation intersection_of: part_of GO:0002181 ! cytoplasmic translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0002181 ! cytoplasmic translation created_by: hjd creation_date: 2011-06-09T03:14:42Z @@ -37809,7 +38467,7 @@ def: "The process preceding formation of the peptide bond between the first two is_a: GO:0006413 ! translational initiation intersection_of: GO:0006413 ! translational initiation intersection_of: part_of GO:0002181 ! cytoplasmic translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0002181 ! cytoplasmic translation created_by: hjd creation_date: 2011-06-09T03:15:48Z @@ -37822,7 +38480,7 @@ is_a: GO:0006415 ! translational termination intersection_of: GO:0006415 ! translational termination intersection_of: BFO:0000066 GO:0005829 ! occurs in cytosol relationship: BFO:0000066 GO:0005829 ! occurs in cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0002181 ! cytoplasmic translation created_by: hjd creation_date: 2011-06-09T03:17:13Z @@ -37833,7 +38491,7 @@ name: somatic diversification of immune receptors def: "The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences." [GOC:add, ISBN:0781735149, PMID:16102575, PMID:16166509] comment: Note that this process covers somatic recombination, gene conversion, hypermutation, N-region addition, and alternate splicing processes of immune receptor diversification. is_a: GO:0002376 ! immune system process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4895 @@ -39096,7 +39754,7 @@ is_a: GO:0002376 ! immune system process is_a: GO:0048731 ! system development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0002405 ! results in development of immune system -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4895 @@ -39216,7 +39874,7 @@ name: somatic diversification of immune receptors via germline recombination wit def: "The process in which immune receptor genes are diversified through recombination of the germline genetic elements within a single genetic locus." [GOC:add, ISBN:0781735149, PMID:16102575, PMID:16166509] is_a: GO:0002200 ! somatic diversification of immune receptors is_a: GO:0016444 ! somatic cell DNA recombination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -39226,7 +39884,7 @@ id: GO:0002566 name: somatic diversification of immune receptors via somatic mutation def: "The process in which immune receptor genes are diversified through somatic mutation." [ISBN:0781735149, PMID:16102575] is_a: GO:0002200 ! somatic diversification of immune receptors -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4895 @@ -39278,7 +39936,7 @@ is_a: GO:0051649 ! establishment of localization in cell intersection_of: GO:0045055 ! regulated exocytosis intersection_of: BFO:0000066 CL:0000233 ! occurs in platelet relationship: BFO:0000066 CL:0000233 ! occurs in platelet -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0002577 @@ -41381,7 +42039,7 @@ name: regionalization def: "The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment." [GOC:dph, GOC:isa_complete] synonym: "pattern formation" RELATED [GOC:dph] is_a: GO:0007389 ! pattern specification process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -44287,6 +44945,7 @@ synonym: "molecular function" EXACT [] is_a: BFO:0000015 ! process disjoint_from: GO:0005575 ! cellular_component disjoint_from: GO:0008150 ! biological_process +property_value: editor_note "This is the same as GO molecular function" xsd:string [Term] id: GO:0003676 @@ -45578,6 +46237,9 @@ synonym: "cellular component" EXACT [] synonym: "subcellular entity" RELATED [NIF_Subcellular:nlx_subcell_100315] xref: NIF_Subcellular:sao1337158144 is_a: BFO:0000040 ! material entity +union_of: GO:0032991 ! protein-containing complex +union_of: GO:0044423 ! virion component +union_of: GO:0110165 ! cellular anatomical entity disjoint_from: GO:0008150 ! biological_process property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/17729" xsd:anyURI @@ -45602,7 +46264,7 @@ subset: goslim_prokaryote_ribbon subset: goslim_yeast synonym: "extracellular" EXACT [] xref: Wikipedia:Extracellular -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity [Term] id: GO:0005577 @@ -45699,7 +46361,7 @@ subset: goslim_drosophila subset: goslim_generic synonym: "intercellular space" RELATED [] xref: NIF_Subcellular:sao1425028079 -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0005576 ! extracellular region @@ -45717,11 +46379,21 @@ synonym: "nucleocytoplasm" RELATED [GOC:mah] synonym: "protoplasm" EXACT [] synonym: "protoplast" RELATED [GOC:mah] xref: Wikipedia:Intracellular -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of CL:0000000 ! cell property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/17776" xsd:anyURI +[Term] +id: GO:0005623 +name: obsolete cell +def: "OBSOLETE. The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope." [GOC:go_curators] +comment: This term was obsoleted because it was redundant with the root class of the cell ontology, CL:0000000. +xref: NIF_Subcellular:sao1813327414 +xref: Wikipedia:Cell_(biology) +property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/19036" xsd:anyURI +is_obsolete: true + [Term] id: GO:0005634 name: nucleus @@ -45809,7 +46481,7 @@ synonym: "interphase chromosome" NARROW [] synonym: "prophase chromosome" NARROW [] xref: Wikipedia:Chromosome is_a: GO:0043232 ! intracellular membraneless organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0005730 @@ -45842,8 +46514,8 @@ subset: goslim_prokaryote subset: goslim_prokaryote_ribbon subset: goslim_yeast xref: Wikipedia:Cytoplasm -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005622 ! intracellular anatomical structure property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/23023" xsd:anyURI @@ -45857,7 +46529,7 @@ subset: goslim_plant xref: NIF_Subcellular:sao585356902 xref: Wikipedia:Lysosome is_a: GO:0000323 ! lytic vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi [Term] @@ -45869,7 +46541,7 @@ is_a: GO:0098852 ! lytic vacuole membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0005764 ! lysosome relationship: bounding_layer_of GO:0005764 ! lysosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: part_of GO:0005764 ! lysosome @@ -45879,7 +46551,7 @@ name: primary lysosome def: "A lysosome before it has fused with a vesicle or vacuole." [GOC:jl, ISBN:0815316194] xref: NIF_Subcellular:sao1140587416 is_a: GO:0005764 ! lysosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi [Term] @@ -45901,7 +46573,7 @@ subset: goslim_yeast synonym: "vacuolar carboxypeptidase Y" RELATED [] xref: Wikipedia:Vacuole is_a: GO:0043231 ! intracellular membrane-bounded organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm [Term] @@ -45912,7 +46584,7 @@ is_a: GO:0098588 ! bounding membrane of organelle intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0005773 ! vacuole relationship: bounding_layer_of GO:0005773 ! vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005773 ! vacuole [Term] @@ -45922,7 +46594,7 @@ def: "The volume enclosed within the vacuolar membrane." [ISBN:0198506732] is_a: GO:0070013 ! intracellular organelle lumen intersection_of: GO:0031974 ! membrane-enclosed lumen intersection_of: part_of GO:0005773 ! vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005773 ! vacuole [Term] @@ -45961,7 +46633,7 @@ synonym: "Golgi vesicle" RELATED [] synonym: "vesicular component" RELATED [NIF_Subcellular:sao138219748] xref: NIF_Subcellular:sao819927218 is_a: GO:0031410 ! cytoplasmic vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0005811 @@ -45974,7 +46646,7 @@ synonym: "adiposome" EXACT [] synonym: "lipid body" EXACT [] synonym: "lipid particle" EXACT [] is_a: GO:0043232 ! intracellular membraneless organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0005814 @@ -45986,7 +46658,7 @@ synonym: "mother centriole" NARROW [GOC:cilia] xref: NIF_Subcellular:sao95019936 xref: Wikipedia:Centriole is_a: GO:0043232 ! intracellular membraneless organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005815 ! microtubule organizing center [Term] @@ -46001,8 +46673,8 @@ subset: goslim_yeast synonym: "microtubule organising centre" EXACT [] synonym: "MTOC" EXACT [] xref: Wikipedia:Microtubule_organizing_center -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0015630 ! microtubule cytoskeleton [Term] @@ -46019,8 +46691,8 @@ subset: goslim_mouse subset: goslim_plant xref: NIF_Subcellular:sao101633890 xref: Wikipedia:Cytosol -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm [Term] @@ -46048,7 +46720,7 @@ is_a: GO:0043232 ! intracellular membraneless organelle relationship: capable_of_part_of GO:0006412 ! translation relationship: has_part CHEBI:33697 ! ribonucleic acid relationship: has_part PR:000000001 ! protein -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/17777" xsd:anyURI [Term] @@ -46070,7 +46742,7 @@ subset: goslim_prokaryote subset: goslim_yeast xref: Wikipedia:Cytoskeleton is_a: GO:0043232 ! intracellular membraneless organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0005874 @@ -46083,7 +46755,7 @@ synonym: "neurotubule" NARROW [NIF_Subcellular:sao248349196] xref: NIF_Subcellular:sao1846835077 xref: Wikipedia:Microtubule is_a: GO:0099513 ! polymeric cytoskeletal fiber -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0015630 ! microtubule cytoskeleton [Term] @@ -46119,7 +46791,7 @@ synonym: "non-spindle-associated astral microtubule" NARROW [] is_a: GO:0005874 ! microtubule intersection_of: GO:0005874 ! microtubule intersection_of: part_of GO:0005737 ! cytoplasm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm [Term] @@ -46133,7 +46805,7 @@ xref: FMA:63851 xref: NIF_Subcellular:sao952483289 xref: Wikipedia:Intermediate_filament is_a: GO:0099513 ! polymeric cytoskeletal fiber -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0045111 ! intermediate filament cytoskeleton [Term] @@ -46156,7 +46828,7 @@ xref: FMA:63850 xref: NIF_Subcellular:sao1588493326 xref: Wikipedia:Actin is_a: GO:0099513 ! polymeric cytoskeletal fiber -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0015629 ! actin cytoskeleton [Term] @@ -46294,7 +46966,7 @@ synonym: "cilium axoneme" EXACT [] synonym: "flagellar axoneme" EXACT [] synonym: "flagellum axoneme" EXACT [] xref: Wikipedia:Axoneme -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: has_part GO:0005874 ! microtubule relationship: in_taxon NCBITaxon:2759 ! Eukaryota relationship: never_in_taxon NCBITaxon:3176 @@ -46318,7 +46990,7 @@ xref: Wikipedia:Cell_cortex is_a: GO:0005737 ! cytoplasm intersection_of: GO:0005737 ! cytoplasm intersection_of: part_of GO:0071944 ! cell periphery -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0071944 ! cell periphery property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26298" xsd:anyURI @@ -47121,7 +47793,7 @@ intersection_of: RO:0002338 GO:0005829 ! has target start location cytosol intersection_of: RO:0002339 GO:0031981 ! has target end location nuclear lumen intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0004009 CHEBI:33697 ! has primary input ribonucleic acid -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005829 ! has target start location cytosol relationship: RO:0002339 GO:0031981 ! has target end location nuclear lumen relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -47142,7 +47814,7 @@ intersection_of: RO:0002338 GO:0031981 ! has target start location nuclear lumen intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0004009 CHEBI:33697 ! has primary input ribonucleic acid -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0031981 ! has target start location nuclear lumen relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -47163,7 +47835,7 @@ intersection_of: RO:0002338 GO:0031981 ! has target start location nuclear lumen intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0004009 CHEBI:17843 ! has primary input transfer RNA -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0031981 ! has target start location nuclear lumen relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -47197,7 +47869,7 @@ intersection_of: RO:0004008 PR:000000001 ! has primary output protein relationship: ends_with GO:0006415 ! translational termination relationship: has_part GO:0000048 ! peptidyltransferase activity relationship: has_part GO:0006414 ! translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0010467 ! gene expression relationship: part_of GO:0160307 ! protein biosynthetic process relationship: RO:0004008 PR:000000001 ! has primary output protein @@ -47216,7 +47888,7 @@ synonym: "protein synthesis initiation" BROAD [] synonym: "translation initiation" EXACT [] xref: Reactome:R-HSA-72613 "Eukaryotic Translation Initiation" is_a: GO:0008152 ! metabolic process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006412 ! translation relationship: starts_with GO:0001677 ! formation of translation initiation ternary complex @@ -47231,7 +47903,7 @@ synonym: "protein synthesis elongation" BROAD [] synonym: "translation elongation" EXACT [] xref: Reactome:R-HSA-156842 "Eukaryotic Translation Elongation" is_a: GO:0009059 ! macromolecule biosynthetic process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006412 ! translation [Term] @@ -47245,7 +47917,7 @@ synonym: "translation termination" EXACT [] synonym: "translational complex disassembly" EXACT [] xref: Reactome:R-HSA-72764 "Eukaryotic Translation Termination" is_a: GO:0032984 ! protein-containing complex disassembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006412 ! translation [Term] @@ -47262,7 +47934,7 @@ is_a: GO:0010608 ! post-transcriptional regulation of gene expression is_a: GO:0051246 ! regulation of protein metabolic process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006412 ! regulates (processual) translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006412 ! regulates (processual) translation [Term] @@ -47272,7 +47944,7 @@ def: "Any process that modulates the frequency, rate or extent of translational is_a: GO:0006417 ! regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006413 ! regulates (processual) translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006413 ! regulates (processual) translational initiation [Term] @@ -47282,7 +47954,7 @@ def: "Any process that modulates the frequency, rate, extent or accuracy of tran is_a: GO:0006417 ! regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006414 ! regulates (processual) translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006414 ! regulates (processual) translational elongation [Term] @@ -47293,7 +47965,7 @@ is_a: GO:0006417 ! regulation of translation is_a: GO:0043244 ! regulation of protein-containing complex disassembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006415 ! regulates (processual) translational termination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006415 ! regulates (processual) translational termination [Term] @@ -47624,7 +48296,7 @@ intersection_of: RO:0002338 GO:0005829 ! has target start location cytosol intersection_of: RO:0002339 GO:0031981 ! has target end location nuclear lumen intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0004009 PR:000000001 ! has primary input protein -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005829 ! has target start location cytosol relationship: RO:0002339 GO:0031981 ! has target end location nuclear lumen relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -47647,7 +48319,7 @@ intersection_of: RO:0002338 GO:0031981 ! has target start location nuclear lumen intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0004009 PR:000000001 ! has primary input protein -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0031981 ! has target start location nuclear lumen relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -48541,7 +49213,7 @@ is_a: GO:0050801 ! monoatomic ion homeostasis is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:24867 ! regulates levels of monoatomic ion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:24867 ! regulates levels of monoatomic ion property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24455" xsd:anyURI @@ -48555,7 +49227,7 @@ is_a: GO:0030003 ! intracellular monoatomic cation homeostasis is_a: GO:0055074 ! calcium ion homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:29108 ! regulates levels of calcium(2+) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:29108 ! regulates levels of calcium(2+) [Term] @@ -48569,7 +49241,7 @@ is_a: GO:0030003 ! intracellular monoatomic cation homeostasis is_a: GO:0098771 ! inorganic ion homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:24875 ! regulates levels of iron cation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:24875 ! regulates levels of iron cation [Term] @@ -48581,7 +49253,7 @@ is_a: GO:0030003 ! intracellular monoatomic cation homeostasis is_a: GO:0055078 ! sodium ion homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:29101 ! regulates levels of sodium(1+) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:29101 ! regulates levels of sodium(1+) [Term] @@ -48591,7 +49263,7 @@ def: "Any process involved in maintaining the steady state of a cell's volume. T synonym: "regulation of cell volume" EXACT [GOC:dph, GOC:tb] is_a: GO:0008361 ! regulation of cell size is_a: GO:0019725 ! cellular homeostasis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0006885 @@ -48616,7 +49288,7 @@ is_a: GO:0015031 ! protein transport is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0004009 PR:000000001 ! has primary input protein -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0008104 ! intracellular protein localization relationship: RO:0004009 PR:000000001 ! has primary input protein @@ -48670,7 +49342,7 @@ intersection_of: BFO:0000066 GO:0005622 ! occurs in intracellular anatomical str intersection_of: RO:0002338 GO:0005794 ! has target start location Golgi apparatus intersection_of: RO:0002339 GO:0005773 ! has target end location vacuole relationship: BFO:0000066 GO:0005622 ! occurs in intracellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005794 ! has target start location Golgi apparatus relationship: RO:0002339 GO:0005773 ! has target end location vacuole @@ -48760,7 +49432,7 @@ intersection_of: GO:0006810 ! transport intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0002344 GO:0005829 ! results in transport to from or in cytosol intersection_of: RO:0002344 GO:0031981 ! results in transport to from or in nuclear lumen -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope relationship: RO:0002344 GO:0005829 ! results in transport to from or in cytosol relationship: RO:0002344 GO:0031981 ! results in transport to from or in nuclear lumen @@ -49129,7 +49801,7 @@ name: microtubule nucleation def: "The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation)." [GOC:go_curators, ISBN:0815316194, PMID:12517712] xref: Wikipedia:Microtubule_nucleation is_a: GO:0000226 ! microtubule cytoskeleton organization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0046785 ! microtubule polymerization [Term] @@ -49218,7 +49890,7 @@ subset: goslim_chembl is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002344 GO:0005773 ! results in transport to from or in vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002344 GO:0005773 ! results in transport to from or in vacuole [Term] @@ -49229,7 +49901,7 @@ is_a: GO:0006874 ! intracellular calcium ion homeostasis intersection_of: GO:0055074 ! calcium ion homeostasis intersection_of: BFO:0000066 GO:0005773 ! occurs in vacuole relationship: BFO:0000066 GO:0005773 ! occurs in vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0007039 @@ -49264,7 +49936,7 @@ def: "The directed movement of substances into, out of or within a lysosome." [G is_a: GO:0007034 ! vacuolar transport intersection_of: GO:0006810 ! transport intersection_of: RO:0002344 GO:0005764 ! results in transport to from or in lysosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: RO:0002344 GO:0005764 ! results in transport to from or in lysosome @@ -49778,7 +50450,7 @@ is_a: GO:0032501 ! multicellular organismal process is_a: GO:0048856 ! anatomical structure development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002295 UBERON:0000468 ! results in developmental progression of multicellular organism -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -49811,7 +50483,7 @@ is_a: GO:0022412 ! cellular process involved in reproduction in multicellular or is_a: GO:0048468 ! cell development intersection_of: GO:0032502 ! developmental process intersection_of: RO:0002296 CL:0000586 ! results in development of germ cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -50078,7 +50750,7 @@ name: blastoderm segmentation def: "The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo." [http://fly.ebi.ac.uk/allied-data/lk/interactive-fly/aimain/1aahome.htm, ISBN:0879694238] is_a: GO:0009880 ! embryonic pattern specification is_a: GO:0035282 ! segmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50089,7 +50761,7 @@ id: GO:0007351 name: tripartite regional subdivision def: "Subdivision of the embryo along the anterior/posterior axis into anterior, posterior and terminal regions." [GOC:dph, GOC:isa_complete, http://fly.ebi.ac.uk/allied-data/lk/interactive-fly/aimain/1aahome.htm, ISBN:0879694238] is_a: GO:0003002 ! regionalization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50104,7 +50776,7 @@ is_a: GO:0008595 ! anterior/posterior axis specification, embryo intersection_of: GO:0008595 ! anterior/posterior axis specification, embryo intersection_of: BFO:0000066 CL:0000365 ! occurs in animal zygote relationship: BFO:0000066 CL:0000365 ! occurs in animal zygote -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50142,7 +50814,7 @@ subset: goslim_drosophila synonym: "pattern biosynthesis" RELATED [] synonym: "pattern formation" RELATED [] is_a: GO:0032501 ! multicellular organismal process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50656,7 +51328,7 @@ alt_id: GO:0046699 def: "A biological process in which an animal physically develops after birth or hatching, involving a conspicuous and relatively abrupt change in the animal's form or structure. Examples include the change from tadpole to frog, and the change from larva to adult. An example of this is found in Drosophila melanogaster." [GOC:sensu, ISBN:0198506732, ISBN:0721662544] xref: Wikipedia:Metamorphosis is_a: GO:0007275 ! multicellular organism development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50714,7 +51386,7 @@ name: eclosion def: "The emergence of an adult insect from a pupa case." [GOC:dgh, GOC:dos, GOC:mah, ISBN:0198600461] xref: Wikipedia:Pupa#Emergence is_a: GO:0071684 ! organism emergence from protective structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50728,7 +51400,7 @@ def: "Any process that modulates the frequency, rate or extent of the emergence is_a: GO:2000026 ! regulation of multicellular organismal development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0007562 ! regulates (processual) eclosion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -50985,7 +51657,7 @@ synonym: "response to circadian rhythm" RELATED [] xref: Reactome:R-HSA-400253 "Circadian Clock" xref: Wikipedia:Circadian_rhythm is_a: GO:0048511 ! rhythmic process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0007625 @@ -51270,6 +51942,7 @@ synonym: "single organism process" RELATED [] synonym: "single-organism process" RELATED [] xref: Wikipedia:Biological_process is_a: BFO:0000015 ! process +relationship: has_part GO:0003674 ! molecular_function property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24968" xsd:anyURI created_by: jl creation_date: 2012-09-19T15:05:24Z @@ -51735,7 +52408,7 @@ id: GO:0008358 name: maternal determination of anterior/posterior axis, embryo def: "The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos." [http://fly.ebi.ac.uk/allied-data/lk/interactive-fly/aimain/1aahome.htm, ISBN:0879694238] is_a: GO:0008595 ! anterior/posterior axis specification, embryo -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -51769,7 +52442,7 @@ is_a: GO:0048513 ! animal organ development is_a: GO:0048608 ! reproductive structure development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0000991 ! results in development of gonad -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -51837,7 +52510,7 @@ xref: Reactome:R-HSA-9690406 "Transcriptional regulation of testis differentiati is_a: GO:0008406 ! gonad development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0000473 ! results in development of testis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -51890,7 +52563,7 @@ def: "The specification of the anterior/posterior axis of the embryo by the prod synonym: "anterior/posterior axis determination, embryo" RELATED [GOC:dph] is_a: GO:0000578 ! embryonic axis specification is_a: GO:0009948 ! anterior/posterior axis specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -52611,8 +53284,8 @@ def: "The chemical reactions and pathways involving a ribonucleoside diphosphate synonym: "ribonucleoside diphosphate metabolism" EXACT [] is_a: GO:0009132 ! nucleoside diphosphate metabolic process intersection_of: GO:0008152 ! metabolic process -intersection_of: RO:0004007 CHEBI:17668 ! has primary input or output ribonucleoside diphosphate -relationship: RO:0004007 CHEBI:17668 ! has primary input or output ribonucleoside diphosphate +intersection_of: RO:0004007 CHEBI:17668 ! has primary input or output ribonucleoside diphosphat +relationship: RO:0004007 CHEBI:17668 ! has primary input or output ribonucleoside diphosphat [Term] id: GO:0009188 @@ -52625,8 +53298,8 @@ synonym: "ribonucleoside diphosphate synthesis" EXACT [] is_a: GO:0009133 ! nucleoside diphosphate biosynthetic process is_a: GO:0009185 ! ribonucleoside diphosphate metabolic process intersection_of: GO:0009058 ! biosynthetic process -intersection_of: RO:0004008 CHEBI:17668 ! has primary output ribonucleoside diphosphate -relationship: RO:0004008 CHEBI:17668 ! has primary output ribonucleoside diphosphate +intersection_of: RO:0004008 CHEBI:17668 ! has primary output ribonucleoside diphosphat +relationship: RO:0004008 CHEBI:17668 ! has primary output ribonucleoside diphosphat [Term] id: GO:0009191 @@ -52638,8 +53311,8 @@ synonym: "ribonucleoside diphosphate degradation" EXACT [] is_a: GO:0009134 ! nucleoside diphosphate catabolic process is_a: GO:0009185 ! ribonucleoside diphosphate metabolic process intersection_of: GO:0009056 ! catabolic process -intersection_of: RO:0004009 CHEBI:17668 ! has primary input ribonucleoside diphosphate -relationship: RO:0004009 CHEBI:17668 ! has primary input ribonucleoside diphosphate +intersection_of: RO:0004009 CHEBI:17668 ! has primary input ribonucleoside diphosphat +relationship: RO:0004009 CHEBI:17668 ! has primary input ribonucleoside diphosphat [Term] id: GO:0009201 @@ -53002,7 +53675,7 @@ is_a: GO:0022414 ! reproductive process intersection_of: GO:0022414 ! reproductive process intersection_of: RO:0002297 CL:0010017 ! results in formation of anatomical entity zygote intersection_of: RO:0012008 GO:0043073 ! results in fusion of germ cell nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0019953 ! sexual reproduction relationship: RO:0002297 CL:0010017 ! results in formation of anatomical entity zygote relationship: RO:0012008 GO:0043073 ! results in fusion of germ cell nucleus @@ -53264,7 +53937,7 @@ xref: Wikipedia:Embryogenesis is_a: GO:0007275 ! multicellular organism development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0000922 ! results in development of embryo -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53277,7 +53950,7 @@ name: post-embryonic development def: "The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development." [GOC:go_curators] subset: goslim_plant is_a: GO:0032501 ! multicellular organismal process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53298,7 +53971,7 @@ name: axis specification def: "The establishment, maintenance and elaboration of a pattern along a line or around a point." [GOC:dph, GOC:go_curators, GOC:isa_complete] synonym: "axis determination" RELATED [] is_a: GO:0007389 ! pattern specification process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53350,7 +54023,7 @@ synonym: "embryonic pattern biosynthesis" BROAD [] synonym: "embryonic pattern formation" BROAD [] synonym: "ventral/lateral system" RELATED [] is_a: GO:0007389 ! pattern specification process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53363,7 +54036,7 @@ name: post-embryonic animal morphogenesis def: "The process, occurring after animal embryonic development, by which anatomical structures are generated and organized." [GOC:go_curators] synonym: "post-embryonic morphogenesis of an anatomical structure" EXACT [] is_a: GO:0009653 ! anatomical structure morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53566,7 +54239,7 @@ name: anterior/posterior axis specification def: "The establishment, maintenance and elaboration of the anterior/posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism." [GOC:dph, GOC:go_curators, GOC:tb] synonym: "anterior/posterior axis determination" RELATED [GOC:dph] is_a: GO:0009798 ! axis specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53579,7 +54252,7 @@ name: anterior/posterior pattern specification def: "The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism." [GOC:dph, GOC:go_curators, GOC:isa_complete, GOC:tb] synonym: "anterior/posterior pattern formation" RELATED [] is_a: GO:0003002 ! regionalization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -53685,7 +54358,7 @@ is_a: GO:0006884 ! cell volume homeostasis is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:15377 ! regulates levels of water -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:15377 ! regulates levels of water [Term] @@ -53845,7 +54518,7 @@ def: "The process in which the anatomical structures of the soma are generated a is_a: GO:0009653 ! anatomical structure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: RO:0002298 UBERON:0000468 ! results in morphogenesis of multicellular organism -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002298 UBERON:0000468 ! results in morphogenesis of multicellular organism [Term] @@ -53900,7 +54573,7 @@ is_a: GO:0050793 ! regulation of developmental process is_a: GO:0050794 ! regulation of cellular process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0045165 ! regulates (processual) cell fate commitment -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0045165 ! regulates (processual) cell fate commitment [Term] @@ -53911,7 +54584,7 @@ is_a: GO:0010453 ! regulation of cell fate commitment is_a: GO:0045596 ! negative regulation of cell differentiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0045165 ! negatively regulates cell fate commitment -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0045165 ! negatively regulates cell fate commitment [Term] @@ -53922,7 +54595,7 @@ is_a: GO:0010453 ! regulation of cell fate commitment is_a: GO:0045597 ! positive regulation of cell differentiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0045165 ! positively regulates cell fate commitment -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0045165 ! positively regulates cell fate commitment [Term] @@ -54379,7 +55052,7 @@ is_a: GO:0012501 ! programmed cell death is_a: GO:0048869 ! cellular developmental process intersection_of: GO:0012501 ! programmed cell death intersection_of: part_of GO:0048468 ! cell development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048468 ! cell development [Term] @@ -54854,7 +55527,7 @@ is_a: GO:0045597 ! positive regulation of cell differentiation is_a: GO:0060284 ! regulation of cell development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0048468 ! positively regulates cell development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0048468 ! positively regulates cell development [Term] @@ -54865,7 +55538,7 @@ is_a: GO:0045596 ! negative regulation of cell differentiation is_a: GO:0060284 ! regulation of cell development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0048468 ! negatively regulates cell development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0048468 ! negatively regulates cell development [Term] @@ -54978,7 +55651,7 @@ is_a: GO:0010720 ! positive regulation of cell development is_a: GO:0022604 ! regulation of cell morphogenesis intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0000902 ! positively regulates cell morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0000902 ! positively regulates cell morphogenesis property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24299" xsd:anyURI @@ -54990,7 +55663,7 @@ is_a: GO:0010721 ! negative regulation of cell development is_a: GO:0022604 ! regulation of cell morphogenesis intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0000902 ! negatively regulates cell morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0000902 ! negatively regulates cell morphogenesis property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24299" xsd:anyURI @@ -55381,7 +56054,7 @@ def: "Any process that modulates the rate, frequency or extent of microtubule nu is_a: GO:0031113 ! regulation of microtubule polymerization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0007020 ! regulates (processual) microtubule nucleation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0007020 ! regulates (processual) microtubule nucleation created_by: tb creation_date: 2009-05-20T11:51:21Z @@ -55398,7 +56071,7 @@ is_a: GO:0030705 ! cytoskeleton-dependent intracellular transport is_a: GO:0099111 ! microtubule-based transport intersection_of: GO:0006810 ! transport intersection_of: RO:0002341 GO:0005874 ! results in transport along microtubule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002341 GO:0005874 ! results in transport along microtubule created_by: tb creation_date: 2009-05-27T10:56:08Z @@ -55492,10 +56165,10 @@ subset: goslim_candida subset: goslim_flybase_ribbon subset: goslim_yeast xref: Wikipedia:Endomembrane_system -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: has_part GO:0005773 ! vacuole relationship: has_part GO:0005886 ! plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of CL:0000000 ! cell [Term] @@ -57330,14 +58003,14 @@ id: GO:0015629 name: actin cytoskeleton def: "The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes." [GOC:jl, ISBN:0395825172, ISBN:0815316194] is_a: GO:0005856 ! cytoskeleton -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0015630 name: microtubule cytoskeleton def: "The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins." [GOC:jl, ISBN:0395825172] is_a: GO:0005856 ! cytoskeleton -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0015631 @@ -57755,7 +58428,7 @@ is_a: GO:0015858 ! nucleoside transport is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0004009 CHEBI:33838 ! has primary input nucleoside -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0004009 CHEBI:33838 ! has primary input nucleoside [Term] @@ -57989,7 +58662,7 @@ synonym: "transmembrane" RELATED [GOC:mah] synonym: "whole membrane" NARROW [] xref: Wikipedia:Biological_membrane xref: Wikipedia:Transmembrane_protein -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity disjoint_from: GO:0031012 ! extracellular matrix creation_date: 2014-03-06T11:37:54Z @@ -58066,7 +58739,7 @@ is_a: GO:0009987 ! cellular process is_a: GO:0040007 ! growth intersection_of: GO:0040007 ! growth intersection_of: RO:0002343 CL:0000000 ! results in growth of cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002343 CL:0000000 ! results in growth of cell [Term] @@ -58556,7 +59229,7 @@ name: somatic diversification of immunoglobulins def: "The somatic process that results in the generation of sequence diversity of immunoglobulins." [GOC:add, GOC:ma, ISBN:0781735149] synonym: "somatic diversification of antibodies" EXACT [] is_a: GO:0002200 ! somatic diversification of immune receptors -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4895 @@ -58570,7 +59243,7 @@ def: "Mutations occurring somatically that result in amino acid changes in the r synonym: "somatic hypermutation of antibody genes" EXACT [] is_a: GO:0002566 ! somatic diversification of immune receptors via somatic mutation is_a: GO:0016445 ! somatic diversification of immunoglobulins -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4895 @@ -58583,7 +59256,7 @@ def: "The process in which immunoglobulin genes are formed through recombination synonym: "somatic recombination of antibody gene segments" EXACT [] is_a: GO:0002562 ! somatic diversification of immune receptors via germline recombination within a single locus is_a: GO:0016445 ! somatic diversification of immunoglobulins -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -58605,7 +59278,7 @@ is_a: GO:0046907 ! intracellular transport intersection_of: GO:0006810 ! transport intersection_of: BFO:0000066 GO:0005829 ! occurs in cytosol relationship: BFO:0000066 GO:0005829 ! occurs in cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26386" xsd:anyURI [Term] @@ -58877,7 +59550,7 @@ is_a: GO:0010629 ! negative regulation of gene expression is_a: GO:0051248 ! negative regulation of protein metabolic process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006412 ! negatively regulates translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006412 ! negatively regulates translation [Term] @@ -59578,7 +60251,7 @@ intersection_of: GO:0042592 ! homeostatic process intersection_of: BFO:0000066 CL:0000000 ! occurs in cell disjoint_from: GO:0048872 ! homeostasis of number of cells relationship: BFO:0000066 CL:0000000 ! occurs in cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0019730 @@ -62994,7 +63667,7 @@ def: "The process that regulates the coordinated growth and differentiation that synonym: "neural plate anterior/posterior pattern formation" RELATED [GOC:dph] is_a: GO:0009952 ! anterior/posterior pattern specification is_a: GO:0060897 ! neural plate regionalization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -63339,7 +64012,7 @@ synonym: "regulation of cell shape and cell size" RELATED [GOC:dph, GOC:tb] is_a: GO:0022603 ! regulation of anatomical structure morphogenesis intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0000902 ! regulates (processual) cell morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0000902 ! regulates (processual) cell morphogenesis [Term] @@ -63425,7 +64098,7 @@ synonym: "80S ribosome" NARROW [] is_a: GO:0005840 ! ribosome intersection_of: GO:0005840 ! ribosome intersection_of: part_of GO:0005829 ! cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005829 ! cytosol [Term] @@ -63622,7 +64295,7 @@ is_a: GO:0006873 ! intracellular monoatomic ion homeostasis is_a: GO:0055080 ! monoatomic cation homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:23906 ! regulates levels of monoatomic cation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:23906 ! regulates levels of monoatomic cation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24455" xsd:anyURI @@ -63636,7 +64309,7 @@ is_a: GO:0030003 ! intracellular monoatomic cation homeostasis is_a: GO:0055075 ! potassium ion homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:29103 ! regulates levels of potassium(1+) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:29103 ! regulates levels of potassium(1+) [Term] @@ -63665,7 +64338,7 @@ id: GO:0030017 name: sarcomere def: "The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs." [ISBN:0815316194] xref: Wikipedia:Sarcomere -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0030016 ! myofibril @@ -63703,7 +64376,7 @@ is_a: GO:0022607 ! cellular component assembly is_a: GO:0030030 ! cell projection organization intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0042995 ! results in assembly of cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0042995 ! results in assembly of cell projection [Term] @@ -63762,7 +64435,7 @@ subset: goslim_agr subset: goslim_drosophila subset: goslim_flybase_ribbon xref: Wikipedia:Cell_junction -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: never_in_taxon NCBITaxon:4751 ! Fungi [Term] @@ -63896,7 +64569,7 @@ synonym: "Golgi-vacuole transport vesicle" NARROW [] synonym: "secretory vesicle" RELATED [] xref: NIF_Subcellular:sao885490876 is_a: GO:0031410 ! cytoplasmic vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0012505 ! endomembrane system [Term] @@ -63906,7 +64579,7 @@ def: "A small subcellular vesicle, surrounded by a membrane, that is formed from comment: Note that the term 'secretory vesicle' is sometimes used in this sense, but can also mean 'transport vesicle ; GO:0030133'. synonym: "secretory vesicle" BROAD [] is_a: GO:0099503 ! secretory vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0012505 ! endomembrane system @@ -63955,7 +64628,7 @@ xref: Wikipedia:Cellular_differentiation is_a: GO:0048869 ! cellular developmental process intersection_of: GO:0048869 ! cellular developmental process intersection_of: RO:0002315 CL:0000000 ! results in acquisition of features of cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002315 CL:0000000 ! results in acquisition of features of cell property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24390" xsd:anyURI @@ -64526,7 +65199,7 @@ is_a: GO:0045927 ! positive regulation of growth is_a: GO:0048522 ! positive regulation of cellular process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0016049 ! positively regulates cell growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0016049 ! positively regulates cell growth [Term] @@ -64542,7 +65215,7 @@ is_a: GO:0045926 ! negative regulation of growth is_a: GO:0048523 ! negative regulation of cellular process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0016049 ! negatively regulates cell growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0016049 ! negatively regulates cell growth [Term] @@ -64555,7 +65228,7 @@ subset: goslim_drosophila subset: goslim_generic subset: goslim_pir subset: goslim_plant -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: part_of GO:0071944 ! cell periphery [Term] @@ -64838,7 +65511,7 @@ is_a: GO:0048806 ! genitalia development is_a: GO:0061458 ! reproductive system development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0000079 ! results in development of male reproductive system -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -64852,7 +65525,7 @@ name: female genitalia development def: "The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure." [GOC:mah] synonym: "female genital development" EXACT [] is_a: GO:0048806 ! genitalia development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -64941,7 +65614,7 @@ is_a: GO:0055063 ! sulfate ion homeostasis is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:16189 ! regulates levels of sulfate -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:16189 ! regulates levels of sulfate property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24514" xsd:anyURI @@ -64957,7 +65630,7 @@ is_a: GO:0055062 ! phosphate ion homeostasis is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:43474 ! regulates levels of hydrogenphosphate -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:43474 ! regulates levels of hydrogenphosphate property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26429" xsd:anyURI @@ -64987,7 +65660,7 @@ is_a: GO:0098588 ! bounding membrane of organelle intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0030133 ! transport vesicle relationship: bounding_layer_of GO:0030133 ! transport vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0030133 ! transport vesicle [Term] @@ -64997,7 +65670,7 @@ def: "The lipid bilayer surrounding a cytoplasmic vesicle." [GOC:mah] is_a: GO:0012506 ! vesicle membrane intersection_of: GO:0016020 ! membrane intersection_of: part_of GO:0031410 ! cytoplasmic vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0031410 ! cytoplasmic vesicle [Term] @@ -65010,7 +65683,7 @@ is_a: GO:0098588 ! bounding membrane of organelle intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0005798 ! Golgi-associated vesicle relationship: bounding_layer_of GO:0005798 ! Golgi-associated vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005798 ! Golgi-associated vesicle [Term] @@ -65022,7 +65695,7 @@ is_a: GO:0098588 ! bounding membrane of organelle intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0045009 ! chitosome relationship: bounding_layer_of GO:0045009 ! chitosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0045009 ! chitosome [Term] @@ -65035,7 +65708,7 @@ is_a: GO:0098588 ! bounding membrane of organelle intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0030141 ! secretory granule relationship: bounding_layer_of GO:0030141 ! secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0030141 ! secretory granule @@ -65073,7 +65746,7 @@ subset: goslim_drosophila is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002341 GO:0099513 ! results in transport along polymeric cytoskeletal fiber -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002341 GO:0099513 ! results in transport along polymeric cytoskeletal fiber [Term] @@ -65347,7 +66020,7 @@ id: GO:0030863 name: cortical cytoskeleton def: "The portion of the cytoskeleton that lies just beneath the plasma membrane." [GOC:mah] is_a: GO:0005856 ! cytoskeleton -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005938 ! cell cortex [Term] @@ -65357,7 +66030,7 @@ def: "The portion of the actin cytoskeleton, comprising filamentous actin and as is_a: GO:0030863 ! cortical cytoskeleton intersection_of: GO:0030863 ! cortical cytoskeleton intersection_of: part_of GO:0015629 ! actin cytoskeleton -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0015629 ! actin cytoskeleton [Term] @@ -65658,6 +66331,7 @@ xref: Wikipedia:Extracellular_matrix is_a: GO:0030312 ! external encapsulating structure disjoint_from: GO:0032991 ! protein-containing complex disjoint_from: GO:0043226 ! organelle +disjoint_from: GO:0044423 ! virion component [Term] id: GO:0031016 @@ -65744,7 +66418,7 @@ def: "Electron-dense organelle with a granular internal matrix; contains protein synonym: "dense core vesicle" EXACT syngo_official_label [GOC:kmv] xref: NIF_Subcellular:sao772007592 is_a: GO:0030141 ! secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 [Term] @@ -65795,7 +66469,7 @@ is_a: GO:0031099 ! regeneration is_a: GO:0048513 ! animal organ development intersection_of: GO:0031099 ! regeneration intersection_of: RO:0002299 UBERON:0000062 ! results in maturation of organ -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002299 UBERON:0000062 ! results in maturation of organ [Term] @@ -65863,7 +66537,7 @@ is_a: GO:0032271 ! regulation of protein polymerization is_a: GO:1902903 ! regulation of supramolecular fiber organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0046785 ! regulates (processual) microtubule polymerization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0046785 ! regulates (processual) microtubule polymerization [Term] @@ -65892,7 +66566,7 @@ is_a: GO:0032272 ! negative regulation of protein polymerization is_a: GO:1902904 ! negative regulation of supramolecular fiber organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0046785 ! negatively regulates microtubule polymerization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0046785 ! negatively regulates microtubule polymerization [Term] @@ -65910,7 +66584,7 @@ is_a: GO:0032273 ! positive regulation of protein polymerization is_a: GO:1902905 ! positive regulation of supramolecular fiber organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0046785 ! positively regulates microtubule polymerization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0046785 ! positively regulates microtubule polymerization [Term] @@ -65953,7 +66627,7 @@ is_a: GO:0032502 ! developmental process intersection_of: GO:0032502 ! developmental process intersection_of: has_part GO:0045168 ! cell-cell signaling involved in cell fate commitment relationship: has_part GO:0045168 ! cell-cell signaling involved in cell fate commitment -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4895 [Term] @@ -65968,7 +66642,7 @@ synonym: "pseudopodial protrusion" EXACT [] synonym: "reticulopodium" NARROW [] xref: Wikipedia:Pseudopod is_a: GO:0120025 ! plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/21139" xsd:anyURI property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/21141" xsd:anyURI @@ -65993,7 +66667,7 @@ name: SNARE complex def: "A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25." [GOC:bhm, GOC:pr, PMID:10872468, PMID:19450911] is_a: GO:0098796 ! membrane protein complex relationship: capable_of_part_of GO:0006906 ! vesicle fusion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm [Term] @@ -66017,8 +66691,8 @@ def: "The area of a motile cell closest to the direction of movement." [GOC:pg] subset: goslim_pir synonym: "front of cell" EXACT [] synonym: "leading edge of cell" EXACT [] -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: part_of CL:0000000 ! cell @@ -66032,15 +66706,15 @@ is_a: GO:0098590 ! plasma membrane region intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0120025 ! plasma membrane bounded cell projection relationship: bounding_layer_of GO:0120025 ! plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0120025 ! plasma membrane bounded cell projection [Term] id: GO:0031256 name: leading edge membrane def: "The portion of the plasma membrane surrounding the leading edge of a motile cell." [GOC:mah] -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: part_of GO:0005886 ! plasma membrane relationship: part_of GO:0031252 ! cell leading edge @@ -66066,7 +66740,7 @@ is_a: GO:0031268 ! pseudopodium organization is_a: GO:0120031 ! plasma membrane bounded cell projection assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0031143 ! results in assembly of pseudopodium -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0031143 ! results in assembly of pseudopodium [Term] @@ -66087,7 +66761,7 @@ synonym: "regulation of pseudopodium formation" RELATED [] is_a: GO:0120032 ! regulation of plasma membrane bounded cell projection assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0031269 ! regulates (processual) pseudopodium assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0031269 ! regulates (processual) pseudopodium assembly [Term] @@ -66103,7 +66777,7 @@ is_a: GO:0031272 ! regulation of pseudopodium assembly is_a: GO:0120033 ! negative regulation of plasma membrane bounded cell projection assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0031269 ! negatively regulates pseudopodium assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0031269 ! negatively regulates pseudopodium assembly [Term] @@ -66120,7 +66794,7 @@ is_a: GO:0031272 ! regulation of pseudopodium assembly is_a: GO:0120034 ! positive regulation of plasma membrane bounded cell projection assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0031269 ! positively regulates pseudopodium assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0031269 ! positively regulates pseudopodium assembly [Term] @@ -66405,7 +67079,7 @@ xref: NIF_Subcellular:sao180601769 is_a: GO:0097708 ! intracellular vesicle intersection_of: GO:0031982 ! vesicle intersection_of: part_of GO:0005737 ! cytoplasm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm [Term] @@ -66446,7 +67120,7 @@ is_a: GO:0010468 ! regulation of gene expression is_a: GO:0120261 ! regulation of heterochromatin organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0031507 ! regulates (processual) heterochromatin formation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0031507 ! regulates (processual) heterochromatin formation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/23553" xsd:anyURI @@ -66466,7 +67140,7 @@ is_a: GO:0031445 ! regulation of heterochromatin formation is_a: GO:0120262 ! negative regulation of heterochromatin organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0031507 ! negatively regulates heterochromatin formation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0031507 ! negatively regulates heterochromatin formation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/23553" xsd:anyURI @@ -66485,7 +67159,7 @@ is_a: GO:0044089 ! positive regulation of cellular component biogenesis is_a: GO:0120263 ! positive regulation of heterochromatin organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0031507 ! positively regulates heterochromatin formation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0031507 ! positively regulates heterochromatin formation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/23553" xsd:anyURI @@ -66541,7 +67215,7 @@ is_a: GO:0070828 ! heterochromatin organization intersection_of: GO:0006325 ! chromatin organization intersection_of: RO:0002588 GO:0000792 ! results in assembly of heterochromatin relationship: ends_with GO:0033696 ! heterochromatin boundary formation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0000792 ! results in assembly of heterochromatin property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/18954" xsd:anyURI property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/19112" xsd:anyURI @@ -66848,8 +67522,8 @@ id: GO:0031967 name: organelle envelope def: "A double membrane structure enclosing an organelle, including two lipid bilayers and the region between them. In some cases, an organelle envelope may have more than two membranes." [GOC:mah, GOC:pz] subset: goslim_mouse -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0043227 ! membrane-bounded organelle relationship: part_of GO:0043229 ! intracellular organelle @@ -66863,14 +67537,14 @@ intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0043226 ! organelle intersection_of: part_of GO:0031967 ! organelle envelope relationship: bounding_layer_of GO:0043226 ! organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0031967 ! organelle envelope [Term] id: GO:0031974 name: membrane-enclosed lumen def: "The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen." [GOC:add, GOC:mah] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity disjoint_from: GO:0045202 ! synapse [Term] @@ -66969,7 +67643,7 @@ is_a: GO:0045947 ! negative regulation of translational initiation intersection_of: GO:0065007 ! biological regulation intersection_of: part_of GO:0006950 ! response to stress intersection_of: RO:0002212 GO:0006413 ! negatively regulates translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006950 ! response to stress relationship: RO:0002212 GO:0006413 ! negatively regulates translational initiation @@ -66986,7 +67660,7 @@ is_a: GO:0045948 ! positive regulation of translational initiation intersection_of: GO:0065007 ! biological regulation intersection_of: part_of GO:0006950 ! response to stress intersection_of: RO:0002213 GO:0006413 ! positively regulates translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006950 ! response to stress relationship: RO:0002213 GO:0006413 ! positively regulates translational initiation @@ -66998,7 +67672,7 @@ subset: goslim_pir synonym: "plasma membrane bleb" EXACT [GOC:pr] xref: Wikipedia:Bleb_(cell_biology) is_a: GO:0120025 ! plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0032060 @@ -67012,7 +67686,7 @@ synonym: "plasma membrane blebbing" EXACT [GOC:pr] is_a: GO:0120031 ! plasma membrane bounded cell projection assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0032059 ! results in assembly of bleb -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0032059 ! results in assembly of bleb [Term] @@ -67024,7 +67698,7 @@ is_a: GO:0032507 ! maintenance of protein location in cell intersection_of: GO:0045185 ! maintenance of protein location intersection_of: BFO:0000066 GO:0005938 ! occurs in cell cortex relationship: BFO:0000066 GO:0005938 ! occurs in cell cortex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0032077 @@ -67128,7 +67802,7 @@ is_a: GO:0030667 ! secretory granule membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0031045 ! dense core granule relationship: bounding_layer_of GO:0031045 ! dense core granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0031045 ! dense core granule @@ -67265,7 +67939,7 @@ is_a: GO:0044087 ! regulation of cellular component biogenesis is_a: GO:0110053 ! regulation of actin filament organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0051017 ! regulates (processual) actin filament bundle assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0051017 ! regulates (processual) actin filament bundle assembly [Term] @@ -67281,7 +67955,7 @@ is_a: GO:0051494 ! negative regulation of cytoskeleton organization is_a: GO:1902904 ! negative regulation of supramolecular fiber organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0051017 ! negatively regulates actin filament bundle assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0051017 ! negatively regulates actin filament bundle assembly [Term] @@ -67299,7 +67973,7 @@ is_a: GO:0051495 ! positive regulation of cytoskeleton organization is_a: GO:1902905 ! positive regulation of supramolecular fiber organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0051017 ! positively regulates actin filament bundle assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0051017 ! positively regulates actin filament bundle assembly [Term] @@ -67882,7 +68556,7 @@ synonym: "oxygen homeostasis" BROAD [] is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:15379 ! regulates levels of dioxygen -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:15379 ! regulates levels of dioxygen property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24224" xsd:anyURI @@ -67894,7 +68568,7 @@ is_a: GO:0006869 ! lipid transport is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0004009 CHEBI:18059 ! has primary input lipid -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0004009 CHEBI:18059 ! has primary input lipid [Term] @@ -67946,7 +68620,7 @@ is_a: GO:0032368 ! regulation of lipid transport is_a: GO:0032386 ! regulation of intracellular transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0032365 ! regulates (processual) intracellular lipid transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0032365 ! regulates (processual) intracellular lipid transport [Term] @@ -67962,7 +68636,7 @@ is_a: GO:0032377 ! regulation of intracellular lipid transport is_a: GO:0032387 ! negative regulation of intracellular transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0032365 ! negatively regulates intracellular lipid transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0032365 ! negatively regulates intracellular lipid transport [Term] @@ -67979,7 +68653,7 @@ is_a: GO:0032377 ! regulation of intracellular lipid transport is_a: GO:0032388 ! positive regulation of intracellular transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0032365 ! positively regulates intracellular lipid transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0032365 ! positively regulates intracellular lipid transport [Term] @@ -67991,7 +68665,7 @@ is_a: GO:0051049 ! regulation of transport is_a: GO:0060341 ! regulation of cellular localization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0046907 ! regulates (processual) intracellular transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0046907 ! regulates (processual) intracellular transport [Term] @@ -68007,7 +68681,7 @@ is_a: GO:0048523 ! negative regulation of cellular process is_a: GO:0051051 ! negative regulation of transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0046907 ! negatively regulates intracellular transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0046907 ! negatively regulates intracellular transport [Term] @@ -68024,7 +68698,7 @@ is_a: GO:0048522 ! positive regulation of cellular process is_a: GO:0051050 ! positive regulation of transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0046907 ! positively regulates intracellular transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0046907 ! positively regulates intracellular transport [Term] @@ -68143,9 +68817,9 @@ alt_id: GO:0000141 alt_id: GO:0030482 def: "An assembly of actin filaments that are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness." [GOC:mah] synonym: "actin cable" RELATED [GOC:mah] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: has_part GO:0005884 ! actin filament -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0015629 ! actin cytoskeleton [Term] @@ -68157,7 +68831,7 @@ synonym: "melanosome organization and biogenesis" RELATED [GOC:mah] is_a: GO:0048753 ! pigment granule organization intersection_of: GO:0016043 ! cellular component organization intersection_of: RO:0002592 GO:0042470 ! results in organization of melanosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002592 GO:0042470 ! results in organization of melanosome [Term] @@ -68255,7 +68929,7 @@ is_a: GO:0051651 ! maintenance of location in cell intersection_of: GO:0045185 ! maintenance of protein location intersection_of: BFO:0000066 CL:0000000 ! occurs in cell relationship: BFO:0000066 CL:0000000 ! occurs in cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0032528 @@ -68420,7 +69094,7 @@ is_a: GO:0061024 ! membrane organization intersection_of: GO:0015031 ! protein transport intersection_of: BFO:0000066 GO:0016020 ! occurs in membrane relationship: BFO:0000066 GO:0016020 ! occurs in membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0032609 @@ -68883,7 +69557,7 @@ def: "All of the contents of a plasma membrane bounded cell projection, excludin is_a: GO:0099568 ! cytoplasmic region intersection_of: GO:0005737 ! cytoplasm intersection_of: part_of GO:0120025 ! plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0120025 ! plasma membrane bounded cell projection [Term] @@ -69391,9 +70065,12 @@ synonym: "macromolecule complex" EXACT [] synonym: "protein complex" NARROW [] synonym: "protein containing complex" EXACT [] synonym: "protein-protein complex" NARROW [] +is_a: COB:0000080 ! complex of molecules is_a: GO:0005575 ! cellular_component -disjoint_from: GO:0110165 ! cellular anatomical structure +disjoint_from: GO:0044423 ! virion component +disjoint_from: GO:0110165 ! cellular anatomical entity relationship: has_part PR:000000001 ! protein +property_value: editor_note "This is not covalently bonded, which conflicts with changes to the parent definition." xsd:string [Term] id: GO:0032997 @@ -69664,7 +70341,7 @@ name: cellular pigmentation def: "The deposition or aggregation of coloring matter in a cell." [GOC:mtg_MIT_16mar07] is_a: GO:0009987 ! cellular process is_a: GO:0043473 ! pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0033077 @@ -69879,7 +70556,7 @@ synonym: "V-J joining" EXACT [] synonym: "V-J recombination" EXACT [] xref: Wikipedia:V(D)J_recombination is_a: GO:0002562 ! somatic diversification of immune receptors via germline recombination within a single locus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -69895,7 +70572,7 @@ synonym: "immunoglobulin V-J joining" NARROW [GOC:add] synonym: "immunoglobulin V-J recombination" NARROW [GOC:add] is_a: GO:0016447 ! somatic recombination of immunoglobulin gene segments is_a: GO:0033151 ! V(D)J recombination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -69908,7 +70585,7 @@ is_a: GO:0032386 ! regulation of intracellular transport is_a: GO:0051223 ! regulation of protein transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006886 ! regulates (processual) intracellular protein transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006886 ! regulates (processual) intracellular protein transport [Term] @@ -69952,7 +70629,7 @@ intersection_of: GO:0006810 ! transport intersection_of: RO:0002338 GO:0005576 ! has target start location extracellular region intersection_of: RO:0002339 GO:0005622 ! has target end location intracellular anatomical structure intersection_of: RO:0004009 CHEBI:24875 ! has primary input iron cation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005576 ! has target start location extracellular region relationship: RO:0002339 GO:0005622 ! has target end location intracellular anatomical structure relationship: RO:0004009 CHEBI:24875 ! has primary input iron cation @@ -70063,7 +70740,7 @@ def: "An axon part that is a gap in the myelin where voltage-gated sodium channe synonym: "node of Ranvier axon" RELATED [NIF_Subcellular:sao188049490] xref: NIF_Subcellular:birnlex_1152_2 xref: Wikipedia:Nodes_of_Ranvier -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0044304 ! main axon @@ -70580,7 +71257,7 @@ synonym: "regulation of extent of heterochromatin assembly" RELATED [] synonym: "regulation of extent of heterochromatin formation" EXACT [] synonym: "regulation of heterochromatin spreading" RELATED [] is_a: GO:0070828 ! heterochromatin organization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0031507 ! heterochromatin formation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/22028" xsd:anyURI @@ -71760,7 +72437,7 @@ id: GO:0035188 name: hatching def: "The emergence of an immature organism from a protective structure." [GOC:dgh, GOC:isa_complete, ISBN:0198612001] is_a: GO:0071684 ! organism emergence from protective structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -71889,7 +72566,7 @@ is_a: GO:0010623 ! programmed cell death involved in cell development intersection_of: GO:0012501 ! programmed cell death intersection_of: BFO:0000066 CL:0000586 ! occurs in germ cell relationship: BFO:0000066 CL:0000586 ! occurs in germ cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0035239 @@ -71961,7 +72638,7 @@ is_a: GO:0032501 ! multicellular organismal process is_a: GO:0048589 ! developmental growth intersection_of: GO:0048589 ! developmental growth intersection_of: RO:0002343 UBERON:0000468 ! results in growth of multicellular organism -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -71976,7 +72653,7 @@ is_a: GO:0032501 ! multicellular organismal process is_a: GO:0048589 ! developmental growth intersection_of: GO:0048589 ! developmental growth intersection_of: RO:0002343 UBERON:0000062 ! results in growth of organ -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -72009,7 +72686,7 @@ name: segmentation def: "The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis." [PMID:10611687, PMID:9706689] xref: Wikipedia:Segmentation_(biology) is_a: GO:0003002 ! regionalization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -72020,7 +72697,7 @@ id: GO:0035290 name: trunk segmentation def: "Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8." [PMID:1360402] is_a: GO:0035282 ! segmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -72230,7 +72907,7 @@ def: "The aggregation, arrangement and bonding together of a set of components t is_a: GO:0065003 ! protein-containing complex assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0031201 ! results in assembly of SNARE complex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006906 ! vesicle fusion relationship: RO:0002588 GO:0031201 ! results in assembly of SNARE complex created_by: bf @@ -72292,7 +72969,7 @@ def: "Any process that modulates the frequency, rate or extent of assembly of th is_a: GO:0043254 ! regulation of protein-containing complex assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0035493 ! regulates (processual) SNARE complex assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0035493 ! regulates (processual) SNARE complex assembly created_by: bf creation_date: 2010-05-10T01:49:35Z @@ -72306,7 +72983,7 @@ is_a: GO:0031340 ! positive regulation of vesicle fusion is_a: GO:0035542 ! regulation of SNARE complex assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0035493 ! positively regulates SNARE complex assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0035493 ! positively regulates SNARE complex assembly created_by: bf creation_date: 2010-05-10T01:50:02Z @@ -72320,7 +72997,7 @@ is_a: GO:0031339 ! negative regulation of vesicle fusion is_a: GO:0035542 ! regulation of SNARE complex assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0035493 ! negatively regulates SNARE complex assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0035493 ! negatively regulates SNARE complex assembly created_by: bf creation_date: 2010-05-10T01:51:10Z @@ -72379,7 +73056,7 @@ is_a: GO:0030667 ! secretory granule membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0042582 ! azurophil granule relationship: bounding_layer_of GO:0042582 ! azurophil granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: part_of GO:0042582 ! azurophil granule created_by: bf @@ -72620,7 +73297,7 @@ intersection_of: RO:0002338 GO:0005829 ! has target start location cytosol intersection_of: RO:0002339 GO:0031981 ! has target end location nuclear lumen intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope intersection_of: RO:0004009 CHEBI:17843 ! has primary input transfer RNA -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005829 ! has target start location cytosol relationship: RO:0002339 GO:0031981 ! has target end location nuclear lumen relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -73130,7 +73807,7 @@ comment: Depending on the species, this region may have a distinct geometrically synonym: "cilial transition zone" EXACT [] synonym: "cilium transition zone" EXACT [] synonym: "connecting cilium" RELATED [] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:2759 ! Eukaryota relationship: never_in_taxon NCBITaxon:3176 relationship: never_in_taxon NCBITaxon:3378 @@ -73964,7 +74641,7 @@ id: GO:0036344 name: platelet morphogenesis def: "Generation and organization of a platelet, a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation." [CL:0000233, GOC:BHF, GOC:vk] is_a: GO:0000902 ! cell morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism created_by: bf creation_date: 2012-09-11T15:15:35Z @@ -74008,7 +74685,7 @@ id: GO:0036379 name: myofilament def: "Any of the smallest contractile units of a myofibril (striated muscle fiber)." [Wikipedia:Myofilament] synonym: "striated muscle filament" EXACT [GOC:bf] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0030016 ! myofibril created_by: bf @@ -74018,7 +74695,7 @@ creation_date: 2013-05-22T14:39:06Z id: GO:0036477 name: somatodendritic compartment def: "The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon." [GOC:pad, GOC:PARL] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of CL:0000540 ! neuron created_by: bf @@ -74414,7 +75091,7 @@ synonym: "growth pattern" RELATED [] synonym: "non-developmental growth" RELATED [GOC:mah] is_a: GO:0008150 ! biological_process disjoint_from: GO:0044848 ! biological phase -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0040008 @@ -74423,7 +75100,7 @@ def: "Any process that modulates the frequency, rate or extent of the growth of is_a: GO:0050789 ! regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0040007 ! regulates (processual) growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0040007 ! regulates (processual) growth [Term] @@ -74471,7 +75148,7 @@ is_a: GO:0048638 ! regulation of developmental growth is_a: GO:0051239 ! regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0035264 ! regulates (processual) multicellular organism growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -74489,7 +75166,7 @@ is_a: GO:0048640 ! negative regulation of developmental growth is_a: GO:0051241 ! negative regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0035264 ! negatively regulates multicellular organism growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -74501,7 +75178,7 @@ id: GO:0040016 name: embryonic cleavage def: "The first few specialized divisions of an activated animal egg." [GOC:clt, ISBN:0070524300] is_a: GO:0051301 ! cell division -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -74535,7 +75212,7 @@ is_a: GO:0048639 ! positive regulation of developmental growth is_a: GO:0051240 ! positive regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0035264 ! positively regulates multicellular organism growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -74556,7 +75233,7 @@ is_a: GO:0051094 ! positive regulation of developmental process is_a: GO:0051240 ! positive regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0009790 ! positively regulates embryo development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -74647,7 +75324,7 @@ subset: goslim_generic xref: Wikipedia:Wound_healing is_a: GO:0009611 ! response to wounding relationship: has_part GO:0042246 ! tissue regeneration -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi [Term] @@ -74729,7 +75406,7 @@ synonym: "germ-line stem cell renewal" EXACT [] is_a: GO:0017145 ! stem cell division intersection_of: GO:0051301 ! cell division intersection_of: RO:0004009 CL:0000014 ! has primary input germ line stem cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -74983,7 +75660,7 @@ synonym: "nuclear envelope-ER network" RELATED [] synonym: "nuclear membrane-endoplasmic reticulum continuum" EXACT [GOC:mah] synonym: "nuclear membrane-ER network" EXACT [GOC:mah] is_a: GO:0016020 ! membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0012505 ! endomembrane system [Term] @@ -75207,7 +75884,7 @@ is_a: GO:0031099 ! regeneration is_a: GO:0048589 ! developmental growth intersection_of: GO:0031099 ! regeneration intersection_of: RO:0002299 UBERON:0000479 ! results in maturation of tissue -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: RO:0002299 UBERON:0000479 ! results in maturation of tissue @@ -75237,7 +75914,7 @@ synonym: "ribosomal subunit assembly" NARROW [GOC:mah, GOC:vw] is_a: GO:0140694 ! membraneless organelle assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0005840 ! results in assembly of ribosome -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0042254 ! ribosome biogenesis relationship: RO:0002588 GO:0005840 ! results in assembly of ribosome @@ -75353,7 +76030,7 @@ is_a: GO:0046822 ! regulation of nucleocytoplasmic transport is_a: GO:1900180 ! regulation of protein localization to nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006606 ! regulates (processual) protein import into nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006606 ! regulates (processual) protein import into nucleus [Term] @@ -75374,7 +76051,7 @@ is_a: GO:0090316 ! positive regulation of intracellular protein transport is_a: GO:1900182 ! positive regulation of protein localization to nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006606 ! positively regulates protein import into nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006606 ! positively regulates protein import into nucleus [Term] @@ -75394,7 +76071,7 @@ is_a: GO:0090317 ! negative regulation of intracellular protein transport is_a: GO:1900181 ! negative regulation of protein localization to nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006606 ! negatively regulates protein import into nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006606 ! negatively regulates protein import into nucleus [Term] @@ -76357,7 +77034,7 @@ def: "Primary lysosomal granule readily stainable with a Romanowsky stain." [GOC synonym: "primary granule" EXACT [] is_a: GO:0005766 ! primary lysosome is_a: GO:0030141 ! secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/27231" xsd:anyURI @@ -76377,7 +77054,7 @@ id: GO:0042588 name: zymogen granule def: "A membrane-bounded, cytoplasmic secretory granule found in enzyme-secreting cells and visible by light microscopy. Contain zymogen, an inactive enzyme precursor, often of a digestive enzyme." [GOC:jl, ISBN:0198506732] is_a: GO:0030141 ! secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 [Term] @@ -76388,7 +77065,7 @@ is_a: GO:0030667 ! secretory granule membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0042588 ! zymogen granule relationship: bounding_layer_of GO:0042588 ! zymogen granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0042588 ! zymogen granule @@ -76429,7 +77106,7 @@ synonym: "membrane-coating granule" EXACT [] synonym: "Odland body" NARROW [] xref: NIF_Subcellular:sao1379604862 is_a: GO:0030141 ! secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 [Term] @@ -76507,8 +77184,8 @@ name: actomyosin def: "Any complex of actin, myosin, and accessory proteins." [GOC:go_curators] synonym: "actomyosin complex" EXACT [] synonym: "actomyosin structure" EXACT [] -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0015629 ! actin cytoskeleton [Term] @@ -76607,7 +77284,7 @@ def: "Any process that modulates the frequency, rate or extent of a circadian rh is_a: GO:0050789 ! regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0007623 ! regulates (processual) circadian rhythm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0007623 ! regulates (processual) circadian rhythm [Term] @@ -76623,7 +77300,7 @@ is_a: GO:0042752 ! regulation of circadian rhythm is_a: GO:0048518 ! positive regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0007623 ! positively regulates circadian rhythm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0007623 ! positively regulates circadian rhythm [Term] @@ -76638,7 +77315,7 @@ is_a: GO:0042752 ! regulation of circadian rhythm is_a: GO:0048519 ! negative regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0007623 ! negatively regulates circadian rhythm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0007623 ! negatively regulates circadian rhythm [Term] @@ -76743,8 +77420,8 @@ subset: goslim_prokaryote_ribbon synonym: "cell process" BROAD [] synonym: "cellular process" BROAD [] synonym: "cellular projection" EXACT [] -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of CL:0000000 ! cell [Term] @@ -77275,7 +77952,7 @@ is_a: GO:0006417 ! regulation of translation is_a: GO:0008104 ! intracellular protein localization intersection_of: GO:0008104 ! intracellular protein localization intersection_of: part_of GO:0006412 ! translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006412 ! translation [Term] @@ -77435,7 +78112,7 @@ synonym: "Schwann cell myelin sheath" NARROW [] xref: FMA:62983 xref: NIF_Subcellular:sao593830697 xref: Wikipedia:Myelin -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of CL:0000125 ! glial cell @@ -77450,7 +78127,8 @@ subset: goslim_prokaryote subset: goslim_prokaryote_ribbon xref: NIF_Subcellular:sao1539965131 xref: Wikipedia:Organelle -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity +disjoint_from: GO:0044423 ! virion component [Term] id: GO:0043227 @@ -77492,7 +78170,7 @@ is_a: GO:0043226 ! organelle intersection_of: GO:0043226 ! organelle intersection_of: part_of GO:0005622 ! intracellular anatomical structure disjoint_from: GO:0043230 ! extracellular organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005622 ! intracellular anatomical structure property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28153" xsd:anyURI @@ -77517,7 +78195,7 @@ is_a: GO:0043227 ! membrane-bounded organelle is_a: GO:0043229 ! intracellular organelle intersection_of: GO:0043227 ! membrane-bounded organelle intersection_of: part_of GO:0005622 ! intracellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005622 ! intracellular anatomical structure [Term] @@ -77532,7 +78210,7 @@ is_a: GO:0043228 ! membraneless organelle is_a: GO:0043229 ! intracellular organelle intersection_of: GO:0043228 ! membraneless organelle intersection_of: part_of GO:0005622 ! intracellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005622 ! intracellular anatomical structure property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/29106" xsd:anyURI @@ -78005,7 +78683,7 @@ synonym: "pigment metabolism during developmental pigmentation" RELATED [GOC:dph is_a: GO:0043474 ! pigment metabolic process involved in pigmentation intersection_of: GO:0042440 ! pigment metabolic process intersection_of: part_of GO:0048066 ! developmental pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048066 ! developmental pigmentation [Term] @@ -78264,7 +78942,7 @@ def: "The accumulation of pigment in an organism, tissue or cell, either by incr subset: goslim_chembl subset: goslim_pir is_a: GO:0008150 ! biological_process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0043474 @@ -78275,7 +78953,7 @@ synonym: "pigment metabolism during pigmentation" RELATED [] is_a: GO:0042440 ! pigment metabolic process intersection_of: GO:0042440 ! pigment metabolic process intersection_of: part_of GO:0043473 ! pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0043473 ! pigmentation [Term] @@ -78895,7 +79573,7 @@ def: "A ribonucleoprotein complex that contains aminoacylated initiator methioni synonym: "Met-tRNA/eIF2.GTP ternary complex" NARROW [] synonym: "translation initiation (ternary) complex" EXACT [] is_a: GO:1990904 ! ribonucleoprotein complex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm created_by: jl creation_date: 2009-10-22T02:38:55Z @@ -79003,7 +79681,7 @@ synonym: "dendrite terminal specialization" RELATED [] synonym: "terminal specialization" RELATED [NIF_Subcellular:sao28175134] synonym: "terminal specialization of a dendrite" EXACT [] xref: NIF_Subcellular:sao28175134 -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0030425 ! dendrite created_by: jl @@ -79029,8 +79707,8 @@ synonym: "cell soma" EXACT [] xref: FBbt:00005107 xref: FMA:67301 xref: Wikipedia:Cell_body -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of CL:0000000 ! cell created_by: jl @@ -79044,7 +79722,7 @@ synonym: "axon shaft" RELATED [PMID:11264310, PMID:24312009] synonym: "axon trunk" EXACT [] synonym: "axonal shaft" RELATED [PMID:11264310, PMID:24312009] xref: NIF_Subcellular:sao1596975044 -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0030424 ! axon created_by: jl @@ -79106,6 +79784,22 @@ is_a: GO:0008150 ! biological_process relationship: never_in_taxon NCBITaxon:4895 property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/20191" xsd:anyURI +[Term] +id: GO:0044423 +name: virion component +alt_id: GO:0019012 +def: "Any constituent part of a virion, a complete fully infectious extracellular virus particle." [GOC:jl] +subset: goslim_chembl +subset: goslim_metagenomics +subset: goslim_pir +synonym: "complete virus particle" RELATED [] +synonym: "virion" RELATED [] +synonym: "virion part" EXACT [] +xref: Wikipedia:Virus +is_a: GO:0005575 ! cellular_component +disjoint_from: GO:0110165 ! cellular anatomical entity +relationship: never_in_taxon NCBITaxon:131567 ! cellular organism + [Term] id: GO:0044458 name: motile cilium assembly @@ -79220,7 +79914,7 @@ intersection_of: RO:0002338 GO:0005829 ! has target start location cytosol intersection_of: RO:0002339 GO:0043229 ! has target end location intracellular organelle intersection_of: RO:0002342 GO:0031090 ! results in transport across organelle membrane intersection_of: RO:0004009 PR:000000001 ! has primary input protein -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005829 ! has target start location cytosol relationship: RO:0002339 GO:0043229 ! has target end location intracellular organelle relationship: RO:0002342 GO:0031090 ! results in transport across organelle membrane @@ -79315,7 +80009,7 @@ id: GO:0045009 name: chitosome def: "An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum." [ISBN:0198506732, PMID:8970154] is_a: GO:0031410 ! cytoplasmic vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0045026 @@ -79435,7 +80129,7 @@ def: "A filament composed of acidic and basic keratins (types I and II), typical synonym: "acidic keratin" RELATED [] synonym: "basic/neutral keratin" RELATED [] is_a: GO:0005882 ! intermediate filament -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0045103 @@ -79482,7 +80176,7 @@ id: GO:0045111 name: intermediate filament cytoskeleton def: "Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell." [ISBN:0716731363] is_a: GO:0005856 ! cytoskeleton -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0045117 @@ -79529,7 +80223,7 @@ id: GO:0045137 name: development of primary sexual characteristics def: "The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion." [GOC:ai] is_a: GO:0003006 ! developmental process involved in reproduction -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -79556,7 +80250,7 @@ name: cell fate commitment def: "The cellular developmental process by which a cell establishes the intrinsic character of a cell or tissue region irreversibly committing it to a particular fate." [ISBN:0716731185] comment: Note that this term was 'cell fate determination' but the term name was changed to better match its existing definition and the child term 'cell fate determination; GO:0001709' was also created. is_a: GO:0048869 ! cellular developmental process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0030154 ! cell differentiation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24390" xsd:anyURI @@ -79574,7 +80268,7 @@ synonym: "cell-cell signalling resulting in cell fate commitment" EXACT [] is_a: GO:0007267 ! cell-cell signaling intersection_of: GO:0007267 ! cell-cell signaling intersection_of: part_of GO:0045165 ! cell fate commitment -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0045165 ! cell fate commitment [Term] @@ -79583,8 +80277,8 @@ name: apical part of cell def: "The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue." [GOC:mah, ISBN:0815316194] subset: goslim_pir synonym: "apical region of cell" EXACT [GOC:krc] -is_a: GO:0110165 ! cellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +is_a: GO:0110165 ! cellular anatomical entity +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of CL:0000000 ! cell [Term] @@ -79594,7 +80288,7 @@ def: "The region that lies just beneath the plasma membrane on the apical edge o is_a: GO:0099738 ! cell cortex region intersection_of: GO:0099738 ! cell cortex region intersection_of: part_of GO:0045177 ! apical part of cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0045177 ! apical part of cell @@ -80031,7 +80725,7 @@ is_a: GO:0050793 ! regulation of developmental process is_a: GO:0050794 ! regulation of cellular process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0030154 ! regulates (processual) cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0030154 ! regulates (processual) cell differentiation [Term] @@ -80047,7 +80741,7 @@ is_a: GO:0048523 ! negative regulation of cellular process is_a: GO:0051093 ! negative regulation of developmental process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0030154 ! negatively regulates cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0030154 ! negatively regulates cell differentiation [Term] @@ -80064,7 +80758,7 @@ is_a: GO:0048522 ! positive regulation of cellular process is_a: GO:0051094 ! positive regulation of developmental process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0030154 ! positively regulates cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0030154 ! positively regulates cell differentiation [Term] @@ -81225,7 +81919,7 @@ is_a: GO:0010628 ! positive regulation of gene expression is_a: GO:0051247 ! positive regulation of protein metabolic process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006412 ! positively regulates translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006412 ! positively regulates translation [Term] @@ -81617,7 +82311,7 @@ is_a: GO:0051093 ! negative regulation of developmental process is_a: GO:0051241 ! negative regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0007562 ! negatively regulates eclosion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -81637,7 +82331,7 @@ is_a: GO:0007563 ! regulation of eclosion is_a: GO:0051240 ! positive regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0007562 ! positively regulates eclosion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -82059,7 +82753,7 @@ is_a: GO:0006448 ! regulation of translational elongation is_a: GO:0017148 ! negative regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006414 ! negatively regulates translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006414 ! negatively regulates translational elongation [Term] @@ -82075,7 +82769,7 @@ is_a: GO:0006448 ! regulation of translational elongation is_a: GO:0045727 ! positive regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006414 ! positively regulates translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006414 ! positively regulates translational elongation [Term] @@ -82091,7 +82785,7 @@ is_a: GO:0017148 ! negative regulation of translation is_a: GO:0043242 ! negative regulation of protein-containing complex disassembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006415 ! negatively regulates translational termination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006415 ! negatively regulates translational termination [Term] @@ -82108,7 +82802,7 @@ is_a: GO:0043243 ! positive regulation of protein-containing complex disassembly is_a: GO:0045727 ! positive regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006415 ! positively regulates translational termination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006415 ! positively regulates translational termination [Term] @@ -82245,7 +82939,7 @@ is_a: GO:0040008 ! regulation of growth is_a: GO:0048519 ! negative regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0040007 ! negatively regulates growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0040007 ! negatively regulates growth [Term] @@ -82261,7 +82955,7 @@ is_a: GO:0040008 ! regulation of growth is_a: GO:0048518 ! positive regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0040007 ! positively regulates growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0040007 ! positively regulates growth [Term] @@ -82459,7 +83153,7 @@ is_a: GO:0006446 ! regulation of translational initiation is_a: GO:0017148 ! negative regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006413 ! negatively regulates translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006413 ! negatively regulates translational initiation [Term] @@ -82475,7 +83169,7 @@ is_a: GO:0006446 ! regulation of translational initiation is_a: GO:0045727 ! positive regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006413 ! positively regulates translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006413 ! positively regulates translational initiation [Term] @@ -82911,7 +83605,7 @@ is_a: GO:0051093 ! negative regulation of developmental process is_a: GO:0051241 ! negative regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0009790 ! negatively regulates embryo development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -82925,7 +83619,7 @@ def: "Any process that modulates the frequency, rate or extent of embryonic deve is_a: GO:2000026 ! regulation of multicellular organismal development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0009790 ! regulates (processual) embryo development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83639,7 +84333,7 @@ id: GO:0046545 name: development of primary female sexual characteristics def: "The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion." [GOC:ai] is_a: GO:0045137 ! development of primary sexual characteristics -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83651,7 +84345,7 @@ id: GO:0046546 name: development of primary male sexual characteristics def: "The process whose specific outcome is the progression of the primary male sexual characteristics over time, from their formation to the mature structures. The primary male sexual characteristics are the testes, and they develop in response to sex hormone secretion." [GOC:ai] is_a: GO:0045137 ! development of primary sexual characteristics -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83688,7 +84382,7 @@ is_a: GO:0048638 ! regulation of developmental growth is_a: GO:0051239 ! regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0035265 ! regulates (processual) organ growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83704,7 +84398,7 @@ is_a: GO:0048640 ! negative regulation of developmental growth is_a: GO:0051241 ! negative regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0035265 ! negatively regulates organ growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83720,7 +84414,7 @@ is_a: GO:0048639 ! positive regulation of developmental growth is_a: GO:0051240 ! positive regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0035265 ! positively regulates organ growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83819,7 +84513,7 @@ id: GO:0046660 name: female sex differentiation def: "The establishment of the sex of a female organism by physical differentiation." [GOC:bf] is_a: GO:0007548 ! sex differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -83831,7 +84525,7 @@ id: GO:0046661 name: male sex differentiation def: "The establishment of the sex of a male organism by physical differentiation." [GOC:bf] is_a: GO:0007548 ! sex differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -84027,7 +84721,7 @@ is_a: GO:0019725 ! cellular homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: BFO:0000066 CL:0000187 ! occurs in muscle cell relationship: BFO:0000066 CL:0000187 ! occurs in muscle cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24218" xsd:anyURI @@ -84059,7 +84753,7 @@ is_a: GO:0051258 ! protein polymerization is_a: GO:0097435 ! supramolecular fiber organization intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0005874 ! results in assembly of microtubule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0005874 ! results in assembly of microtubule relationship: starts_with GO:0007020 ! microtubule nucleation @@ -84070,7 +84764,7 @@ def: "Any process that modulates the frequency, rate or extent of the directed m is_a: GO:0032386 ! regulation of intracellular transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006913 ! regulates (processual) nucleocytoplasmic transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006913 ! regulates (processual) nucleocytoplasmic transport [Term] @@ -84085,7 +84779,7 @@ is_a: GO:0032387 ! negative regulation of intracellular transport is_a: GO:0046822 ! regulation of nucleocytoplasmic transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006913 ! negatively regulates nucleocytoplasmic transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006913 ! negatively regulates nucleocytoplasmic transport [Term] @@ -84101,7 +84795,7 @@ is_a: GO:0032388 ! positive regulation of intracellular transport is_a: GO:0046822 ! regulation of nucleocytoplasmic transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006913 ! positively regulates nucleocytoplasmic transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006913 ! positively regulates nucleocytoplasmic transport [Term] @@ -84116,7 +84810,7 @@ is_a: GO:0033157 ! regulation of intracellular protein transport is_a: GO:0046822 ! regulation of nucleocytoplasmic transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006611 ! regulates (processual) protein export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006611 ! regulates (processual) protein export from nucleus [Term] @@ -84158,7 +84852,7 @@ is_a: GO:0046825 ! regulation of protein export from nucleus is_a: GO:0090316 ! positive regulation of intracellular protein transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006611 ! positively regulates protein export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006611 ! positively regulates protein export from nucleus [Term] @@ -84172,7 +84866,7 @@ is_a: GO:0032239 ! regulation of nucleobase-containing compound transport is_a: GO:0046822 ! regulation of nucleocytoplasmic transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006404 ! regulates (processual) RNA import into nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006404 ! regulates (processual) RNA import into nucleus [Term] @@ -84191,7 +84885,7 @@ is_a: GO:0046823 ! negative regulation of nucleocytoplasmic transport is_a: GO:0046828 ! regulation of RNA import into nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006404 ! negatively regulates RNA import into nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006404 ! negatively regulates RNA import into nucleus [Term] @@ -84211,7 +84905,7 @@ is_a: GO:0046824 ! positive regulation of nucleocytoplasmic transport is_a: GO:0046828 ! regulation of RNA import into nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006404 ! positively regulates RNA import into nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006404 ! positively regulates RNA import into nucleus [Term] @@ -84226,7 +84920,7 @@ is_a: GO:0032239 ! regulation of nucleobase-containing compound transport is_a: GO:0046822 ! regulation of nucleocytoplasmic transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006405 ! regulates (processual) RNA export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006405 ! regulates (processual) RNA export from nucleus [Term] @@ -84246,7 +84940,7 @@ is_a: GO:0046823 ! negative regulation of nucleocytoplasmic transport is_a: GO:0046831 ! regulation of RNA export from nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006405 ! negatively regulates RNA export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006405 ! negatively regulates RNA export from nucleus [Term] @@ -84267,7 +84961,7 @@ is_a: GO:0046824 ! positive regulation of nucleocytoplasmic transport is_a: GO:0046831 ! regulation of RNA export from nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006405 ! positively regulates RNA export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006405 ! positively regulates RNA export from nucleus [Term] @@ -84607,7 +85301,7 @@ is_a: GO:0051649 ! establishment of localization in cell intersection_of: GO:0006810 ! transport intersection_of: BFO:0000066 GO:0005622 ! occurs in intracellular anatomical structure relationship: BFO:0000066 GO:0005622 ! occurs in intracellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism created_by: jl creation_date: 2013-12-18T14:04:50Z @@ -84773,7 +85467,7 @@ name: developmental pigmentation def: "The developmental process that results in the deposition of coloring matter in an organism, tissue or cell." [ISBN:0582227089] synonym: "pigmentation during development" RELATED [] is_a: GO:0043473 ! pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0048070 @@ -84783,7 +85477,7 @@ synonym: "regulation of pigmentation during development" EXACT [GOC:dph, GOC:tb] is_a: GO:0120305 ! regulation of pigmentation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0048066 ! regulates (processual) developmental pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0048066 ! regulates (processual) developmental pigmentation [Term] @@ -84798,7 +85492,7 @@ is_a: GO:0048070 ! regulation of developmental pigmentation is_a: GO:0048519 ! negative regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0048066 ! negatively regulates developmental pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0048066 ! negatively regulates developmental pigmentation [Term] @@ -84814,7 +85508,7 @@ is_a: GO:0048070 ! regulation of developmental pigmentation is_a: GO:0048518 ! positive regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0048066 ! positively regulates developmental pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0048066 ! positively regulates developmental pigmentation [Term] @@ -85356,7 +86050,7 @@ is_a: GO:0048856 ! anatomical structure development is_a: GO:0048869 ! cellular developmental process intersection_of: GO:0008150 ! biological_process intersection_of: RO:0002296 CL:0000000 ! results in development of cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0030154 ! cell differentiation relationship: RO:0002296 CL:0000000 ! results in development of cell property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24390" xsd:anyURI @@ -85371,7 +86065,7 @@ is_a: GO:0048869 ! cellular developmental process is_a: GO:0071695 ! anatomical structure maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: RO:0002299 CL:0000000 ! results in maturation of cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048468 ! cell development relationship: RO:0002299 CL:0000000 ! results in maturation of cell property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24390" xsd:anyURI @@ -85442,7 +86136,7 @@ def: "The process controlling the activation and/or rate at which relatively uns synonym: "timing of cell differentiation" RELATED [] is_a: GO:0040034 ! regulation of development, heterochronic is_a: GO:0045595 ! regulation of cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0048511 @@ -85451,7 +86145,7 @@ def: "Any process pertinent to the generation and maintenance of rhythms in the subset: goslim_pir synonym: "rhythm" RELATED [] is_a: GO:0008150 ! biological_process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0048512 @@ -85609,7 +86303,7 @@ synonym: "haematopoietic or lymphoid organ development" EXACT [] synonym: "haemopoietic or lymphoid organ development" EXACT [] synonym: "hemopoietic or lymphoid organ development" EXACT [] is_a: GO:0048513 ! animal organ development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4895 @@ -85763,7 +86457,7 @@ is_a: GO:0048513 ! animal organ development intersection_of: GO:0048856 ! anatomical structure development intersection_of: part_of GO:0009790 ! embryo development intersection_of: RO:0002296 UBERON:0000062 ! results in development of organ -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -85789,7 +86483,7 @@ def: "Any process that modulates the frequency, rate or extent of post-embryonic is_a: GO:2000026 ! regulation of multicellular organismal development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0009791 ! regulates (processual) post-embryonic development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -85809,7 +86503,7 @@ is_a: GO:0051093 ! negative regulation of developmental process is_a: GO:0051241 ! negative regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0009791 ! negatively regulates post-embryonic development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -85830,7 +86524,7 @@ is_a: GO:0051094 ! positive regulation of developmental process is_a: GO:0051240 ! positive regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0009791 ! positively regulates post-embryonic development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -85889,7 +86583,7 @@ subset: gocheck_do_not_annotate synonym: "developmental growth of a unicellular organism" EXACT [] is_a: GO:0016049 ! cell growth is_a: GO:0048589 ! developmental growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048468 ! cell development property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26424" xsd:anyURI @@ -85900,7 +86594,7 @@ def: "The increase in size or mass of an entire organism, a part of an organism is_a: GO:0040007 ! growth intersection_of: GO:0040007 ! growth intersection_of: part_of GO:0032502 ! developmental process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0032502 ! developmental process [Term] @@ -85946,7 +86640,7 @@ alt_id: GO:0048828 def: "The process in which anatomical structures are generated and organized during the embryonic phase. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants." [GOC:jid, GOC:mtg_sensu] synonym: "embryonic anatomical structure morphogenesis" EXACT [GOC:dph, GOC:tb] is_a: GO:0009653 ! anatomical structure morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -85983,7 +86677,7 @@ name: reproductive structure development def: "The reproductive developmental process whose specific outcome is the progression of somatic structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures." [GOC:dph, GOC:isa_complete, GOC:jid] is_a: GO:0003006 ! developmental process involved in reproduction is_a: GO:0048856 ! anatomical structure development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -86137,7 +86831,7 @@ is_a: GO:0040008 ! regulation of growth is_a: GO:0050793 ! regulation of developmental process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0048589 ! regulates (processual) developmental growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0048589 ! regulates (processual) developmental growth [Term] @@ -86154,7 +86848,7 @@ is_a: GO:0048638 ! regulation of developmental growth is_a: GO:0051094 ! positive regulation of developmental process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0048589 ! positively regulates developmental growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0048589 ! positively regulates developmental growth [Term] @@ -86170,7 +86864,7 @@ is_a: GO:0048638 ! regulation of developmental growth is_a: GO:0051093 ! negative regulation of developmental process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0048589 ! negatively regulates developmental growth -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0048589 ! negatively regulates developmental growth [Term] @@ -86494,7 +87188,7 @@ subset: goslim_mouse is_a: GO:0048856 ! anatomical structure development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0000467 ! results in development of anatomical system -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -86694,7 +87388,7 @@ synonym: "pigment granule organization and biogenesis" RELATED [GOC:mah] is_a: GO:0016050 ! vesicle organization intersection_of: GO:0016043 ! cellular component organization intersection_of: RO:0002592 GO:0048770 ! results in organization of pigment granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0033059 ! cellular pigmentation relationship: RO:0002592 GO:0048770 ! results in organization of pigment granule @@ -86738,7 +87432,7 @@ id: GO:0048770 name: pigment granule def: "A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes." [GOC:jid, GOC:mh] is_a: GO:0031410 ! cytoplasmic vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0048771 @@ -86823,7 +87517,7 @@ synonym: "pre-synaptic active zone" EXACT [] synonym: "pre-synaptic active zone component" NARROW [NIF_Subcellular:sao1911631652] synonym: "presynaptic specialization" EXACT [] xref: NIF_Subcellular:sao792027222 -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0098793 ! presynapse @@ -86930,7 +87624,7 @@ def: "A developmental process, independent of morphogenetic (shape) change, that is_a: GO:0071695 ! anatomical structure maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: RO:0002299 UBERON:0000062 ! results in maturation of organ -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048513 ! animal organ development relationship: RO:0002299 UBERON:0000062 ! results in maturation of organ @@ -86954,7 +87648,7 @@ def: "The process whose specific outcome is the progression of the genitalia ove synonym: "genital development" EXACT [] is_a: GO:0048513 ! animal organ development is_a: GO:0048608 ! reproductive structure development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -87327,7 +88021,7 @@ is_a: GO:0009653 ! anatomical structure morphogenesis is_a: GO:0030030 ! cell projection organization intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: RO:0002298 GO:0042995 ! results in morphogenesis of cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0000902 ! cell morphogenesis relationship: RO:0002298 GO:0042995 ! results in morphogenesis of cell projection @@ -89231,7 +89925,7 @@ synonym: "pigmented cell differentiation" EXACT [] is_a: GO:0030154 ! cell differentiation intersection_of: GO:0030154 ! cell differentiation intersection_of: RO:0002315 CL:0000147 ! results in acquisition of features of pigment cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048066 ! developmental pigmentation relationship: RO:0002315 CL:0000147 ! results in acquisition of features of pigment cell @@ -89242,7 +89936,7 @@ def: "Any process that modulates the frequency, rate or extent of pigmented cell is_a: GO:0045595 ! regulation of cell differentiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0050931 ! regulates (processual) pigment cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0050931 ! regulates (processual) pigment cell differentiation [Term] @@ -89302,7 +89996,7 @@ is_a: GO:0048086 ! negative regulation of developmental pigmentation is_a: GO:0050932 ! regulation of pigment cell differentiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0050931 ! negatively regulates pigment cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0050931 ! negatively regulates pigment cell differentiation [Term] @@ -89319,7 +90013,7 @@ is_a: GO:0048087 ! positive regulation of developmental pigmentation is_a: GO:0050932 ! regulation of pigment cell differentiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0050931 ! positively regulates pigment cell differentiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0050931 ! positively regulates pigment cell differentiation [Term] @@ -89766,7 +90460,7 @@ is_a: GO:0022607 ! cellular component assembly is_a: GO:0061572 ! actin filament bundle organization intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0032432 ! results in assembly of actin filament bundle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0032432 ! results in assembly of actin filament bundle [Term] @@ -90317,7 +91011,7 @@ intersection_of: GO:0006810 ! transport intersection_of: RO:0002338 GO:0031981 ! has target start location nuclear lumen intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0031981 ! has target start location nuclear lumen relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -90332,7 +91026,7 @@ xref: Wikipedia:Nuclear_transport is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002344 GO:0005634 ! results in transport to from or in nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002344 GO:0005634 ! results in transport to from or in nucleus [Term] @@ -90347,7 +91041,7 @@ intersection_of: GO:0006810 ! transport intersection_of: RO:0002338 GO:0005829 ! has target start location cytosol intersection_of: RO:0002339 GO:0031981 ! has target end location nuclear lumen intersection_of: RO:0002342 GO:0005635 ! results in transport across nuclear envelope -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005829 ! has target start location cytosol relationship: RO:0002339 GO:0031981 ! has target end location nuclear lumen relationship: RO:0002342 GO:0005635 ! results in transport across nuclear envelope @@ -90401,7 +91095,7 @@ synonym: "storage of calcium ion (Ca2+)" EXACT [] is_a: GO:0051651 ! maintenance of location in cell intersection_of: GO:0051235 ! maintenance of location intersection_of: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0006874 ! intracellular calcium ion homeostasis relationship: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) @@ -90426,7 +91120,7 @@ intersection_of: GO:0055085 ! transmembrane transport intersection_of: RO:0002338 GO:0043231 ! has target start location intracellular membrane-bounded organelle intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0043231 ! has target start location intracellular membrane-bounded organelle relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) @@ -90822,7 +91516,7 @@ is_a: GO:0051282 ! regulation of sequestering of calcium ion is_a: GO:1903169 ! regulation of calcium ion transmembrane transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0051209 ! regulates (processual) release of sequestered calcium ion into cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0051209 ! regulates (processual) release of sequestered calcium ion into cytosol [Term] @@ -90849,7 +91543,7 @@ is_a: GO:0051284 ! positive regulation of sequestering of calcium ion is_a: GO:1903170 ! negative regulation of calcium ion transmembrane transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0051209 ! negatively regulates release of sequestered calcium ion into cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0051209 ! negatively regulates release of sequestered calcium ion into cytosol [Term] @@ -90876,7 +91570,7 @@ is_a: GO:0051279 ! regulation of release of sequestered calcium ion into cytosol is_a: GO:1904427 ! positive regulation of calcium ion transmembrane transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0051209 ! positively regulates release of sequestered calcium ion into cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0051209 ! positively regulates release of sequestered calcium ion into cytosol [Term] @@ -90895,7 +91589,7 @@ is_a: GO:0032879 ! regulation of localization is_a: GO:0050794 ! regulation of cellular process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0051208 ! regulates (processual) sequestering of calcium ion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0051208 ! regulates (processual) sequestering of calcium ion [Term] @@ -90918,7 +91612,7 @@ is_a: GO:0048523 ! negative regulation of cellular process is_a: GO:0051282 ! regulation of sequestering of calcium ion intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0051208 ! negatively regulates sequestering of calcium ion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0051208 ! negatively regulates sequestering of calcium ion [Term] @@ -90942,7 +91636,7 @@ is_a: GO:0048522 ! positive regulation of cellular process is_a: GO:0051282 ! regulation of sequestering of calcium ion intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0051208 ! positively regulates sequestering of calcium ion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0051208 ! positively regulates sequestering of calcium ion [Term] @@ -91134,7 +91828,7 @@ synonym: "MTOC-mediated microtubule nucleation" EXACT [] is_a: GO:0007020 ! microtubule nucleation intersection_of: GO:0007020 ! microtubule nucleation intersection_of: RO:0002608 GO:0005815 ! process has causal agent microtubule organizing center -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002608 GO:0005815 ! process has causal agent microtubule organizing center [Term] @@ -91879,7 +92573,7 @@ is_a: GO:0051234 ! establishment of localization intersection_of: GO:0051234 ! establishment of localization intersection_of: BFO:0000066 CL:0000000 ! occurs in cell relationship: BFO:0000066 CL:0000000 ! occurs in cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0051641 ! cellular localization [Term] @@ -93178,7 +93872,7 @@ is_a: GO:0019725 ! cellular homeostasis is_a: GO:0048878 ! chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:24431 ! regulates levels of chemical entity -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:24431 ! regulates levels of chemical entity property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24514" xsd:anyURI @@ -93269,7 +93963,7 @@ is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002338 GO:0005794 ! has target start location Golgi apparatus intersection_of: RO:0002339 GO:0030141 ! has target end location secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005794 ! has target start location Golgi apparatus relationship: RO:0002339 GO:0030141 ! has target end location secretory granule @@ -93281,7 +93975,7 @@ is_a: GO:0046907 ! intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002338 GO:0005794 ! has target start location Golgi apparatus intersection_of: RO:0002339 GO:0030133 ! has target end location transport vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048193 ! Golgi vesicle transport relationship: RO:0002338 GO:0005794 ! has target start location Golgi apparatus relationship: RO:0002339 GO:0030133 ! has target end location transport vesicle @@ -93332,7 +94026,7 @@ def: "The process whose specific outcome is the progression of the digestive sys is_a: GO:0048731 ! system development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0001007 ! results in development of digestive system -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -93399,7 +94093,7 @@ def: "The multiplication or reproduction of Sertoli cells, resulting in the expa is_a: GO:0050673 ! epithelial cell proliferation intersection_of: GO:0008283 ! cell population proliferation intersection_of: RO:0012003 CL:0000216 ! acts on population of Sertoli cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -93648,7 +94342,7 @@ def: "Any process that activates or increases the rate or extent of epithelial c is_a: GO:0050679 ! positive regulation of epithelial cell proliferation intersection_of: GO:0050679 ! positive regulation of epithelial cell proliferation intersection_of: part_of GO:0042060 ! wound healing -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: part_of GO:0042060 ! wound healing @@ -94397,7 +95091,7 @@ def: "Any process that modulates the rate, frequency or extent of the progressio is_a: GO:0045595 ! regulation of cell differentiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0048468 ! regulates (processual) cell development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0048468 ! regulates (processual) cell development [Term] @@ -94891,7 +95585,7 @@ relationship: RO:0002298 UBERON:0002385 ! results in morphogenesis of muscle tis id: GO:0060417 name: yolk def: "The cytoplasmic part that serves as a nutrient reserve or energy source for the developing embryo." [GOC:dph, GOC:tb, PMID:18046696] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of GO:0005737 ! cytoplasm @@ -95382,7 +96076,7 @@ is_a: GO:0080154 ! regulation of fertilization is_a: GO:2000242 ! negative regulation of reproductive process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0009566 ! negatively regulates fertilization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0009566 ! negatively regulates fertilization [Term] @@ -95543,7 +96237,7 @@ is_a: GO:0031344 ! regulation of cell projection organization is_a: GO:0044087 ! regulation of cellular component biogenesis intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0030031 ! regulates (processual) cell projection assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0030031 ! regulates (processual) cell projection assembly [Term] @@ -95843,7 +96537,7 @@ synonym: "differential growth" EXACT [GOC:dph] is_a: GO:0048589 ! developmental growth intersection_of: GO:0048589 ! developmental growth intersection_of: part_of GO:0009653 ! anatomical structure morphogenesis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0009653 ! anatomical structure morphogenesis created_by: dph creation_date: 2009-04-28T08:42:53Z @@ -96030,7 +96724,7 @@ def: "The commitment of cells to specific cell fates and their capacity to diffe is_a: GO:0045165 ! cell fate commitment intersection_of: GO:0045165 ! cell fate commitment intersection_of: part_of GO:0007389 ! pattern specification process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -97276,7 +97970,7 @@ def: "Any process that modulates the frequency, rate or extent of cell different is_a: GO:0045595 ! regulation of cell differentiation intersection_of: GO:0045595 ! regulation of cell differentiation intersection_of: part_of GO:0001894 ! tissue homeostasis -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -97410,7 +98104,7 @@ def: "Any process that modulates the frequency, rate or extent of translation of is_a: GO:0006417 ! regulation of translation intersection_of: GO:0006417 ! regulation of translation intersection_of: part_of GO:0009948 ! anterior/posterior axis specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -97652,7 +98346,7 @@ name: neural plate pattern specification def: "The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate." [GOC:dph, GOC:sdb_2009, GOC:tb] xref: Reactome:R-HSA-9834899 "Specification of the neural plate border" is_a: GO:0007389 ! pattern specification process -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -97666,7 +98360,7 @@ name: neural plate regionalization def: "The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment." [GOC:dph, GOC:sdb_2009, GOC:tb] is_a: GO:0003002 ! regionalization is_a: GO:0060896 ! neural plate pattern specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -98447,7 +99141,7 @@ def: "Any process that modulates the rate, frequency, or extent of the series of is_a: GO:1903034 ! regulation of response to wounding intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0042060 ! regulates (processual) wound healing -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: RO:0002211 GO:0042060 ! regulates (processual) wound healing created_by: dph @@ -98462,7 +99156,7 @@ is_a: GO:0061041 ! regulation of wound healing is_a: GO:1903035 ! negative regulation of response to wounding intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0042060 ! negatively regulates wound healing -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: RO:0002212 GO:0042060 ! negatively regulates wound healing created_by: dph @@ -100859,7 +101553,7 @@ intersection_of: GO:0055085 ! transmembrane transport intersection_of: RO:0002338 GO:0005794 ! has target start location Golgi apparatus intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005794 ! has target start location Golgi apparatus relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) @@ -100873,7 +101567,7 @@ def: "The progression of the reproductive system over time from its formation to is_a: GO:0048731 ! system development intersection_of: GO:0048856 ! anatomical structure development intersection_of: RO:0002296 UBERON:0000990 ! results in development of reproductive system -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -101463,7 +102157,7 @@ is_a: GO:0033363 ! secretory granule organization is_a: GO:0071695 ! anatomical structure maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: RO:0002299 GO:0030141 ! results in maturation of secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: RO:0002299 GO:0030141 ! results in maturation of secretory granule created_by: dph @@ -101953,7 +102647,7 @@ intersection_of: GO:0055085 ! transmembrane transport intersection_of: BFO:0000066 GO:0005622 ! occurs in intracellular anatomical structure intersection_of: RO:0004009 PR:000000001 ! has primary input protein relationship: BFO:0000066 GO:0005622 ! occurs in intracellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0004009 PR:000000001 ! has primary input protein [Term] @@ -102036,7 +102730,7 @@ def: "An organelle lumen that is part of an intracellular organelle." [GOC:mah] is_a: GO:0043233 ! organelle lumen intersection_of: GO:0031974 ! membrane-enclosed lumen intersection_of: part_of GO:0043229 ! intracellular organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0043229 ! intracellular organelle [Term] @@ -102048,7 +102742,7 @@ is_a: GO:0019725 ! cellular homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: BFO:0000066 CL:0000540 ! occurs in neuron relationship: BFO:0000066 CL:0000540 ! occurs in neuron -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24218" xsd:anyURI [Term] @@ -102611,7 +103305,7 @@ def: "The process whose specific outcome is the progression of a pigment cell ov is_a: GO:0048468 ! cell development intersection_of: GO:0032502 ! developmental process intersection_of: RO:0002296 CL:0000147 ! results in development of pigment cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0050931 ! pigment cell differentiation relationship: RO:0002296 CL:0000147 ! results in development of pigment cell @@ -102914,7 +103608,7 @@ is_a: GO:0099503 ! secretory vesicle intersection_of: GO:0030133 ! transport vesicle intersection_of: capable_of GO:0099500 ! vesicle fusion to plasma membrane relationship: capable_of GO:0099500 ! vesicle fusion to plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0070384 @@ -102994,7 +103688,7 @@ synonym: "imaginal disc-derived wing hair" NARROW [GOC:mah] synonym: "non-sensory hair" EXACT [GOC:bf] xref: Wikipedia:Membrane_nanotube is_a: GO:0120025 ! plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0070459 @@ -103068,7 +103762,7 @@ is_a: GO:0051649 ! establishment of localization in cell is_a: GO:0140029 ! exocytic process intersection_of: GO:0009306 ! protein secretion intersection_of: RO:0002608 CL:0000233 ! process has causal agent platelet -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0002576 ! platelet degranulation relationship: RO:0002608 CL:0000233 ! process has causal agent platelet created_by: mah @@ -103792,7 +104486,7 @@ is_a: GO:0009749 ! response to glucose is_a: GO:0071331 ! cellular response to hexose stimulus intersection_of: GO:0070887 ! cellular response to chemical stimulus intersection_of: RO:0004009 CHEBI:4167 ! has primary input D-glucopyranose -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0004009 CHEBI:4167 ! has primary input D-glucopyranose created_by: mah creation_date: 2009-12-10T05:38:03Z @@ -104393,7 +105087,7 @@ synonym: "immunoglobulin V(D)J joining" BROAD [GOC:add] synonym: "immunoglobulin V(D)J recombination" BROAD [GOC:add] synonym: "immunoglobulin V-D-J joining" EXACT [GOC:add] is_a: GO:0033152 ! immunoglobulin V(D)J recombination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -104408,7 +105102,7 @@ synonym: "immunoglobulin V(D)J joining" BROAD [GOC:add] synonym: "immunoglobulin V(D)J recombination" BROAD [GOC:add] synonym: "immunoglobulin V-J joining" EXACT [GOC:add] is_a: GO:0033152 ! immunoglobulin V(D)J recombination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -104792,7 +105486,7 @@ id: GO:0071944 name: cell periphery def: "The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures." [GOC:pdt] subset: goslim_flybase_ribbon -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity created_by: mah creation_date: 2010-10-04T01:51:47Z @@ -108042,7 +108736,7 @@ is_a: GO:0032507 ! maintenance of protein location in cell intersection_of: GO:0045185 ! maintenance of protein location intersection_of: BFO:0000066 GO:0043226 ! occurs in organelle relationship: BFO:0000066 GO:0043226 ! occurs in organelle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0033365 ! protein localization to organelle created_by: mah creation_date: 2011-02-14T02:09:13Z @@ -108116,7 +108810,7 @@ is_a: GO:0072595 ! maintenance of protein localization in organelle intersection_of: GO:0045185 ! maintenance of protein location intersection_of: BFO:0000066 GO:0005773 ! occurs in vacuole relationship: BFO:0000066 GO:0005773 ! occurs in vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0072665 ! protein localization to vacuole created_by: mah creation_date: 2011-02-14T02:56:57Z @@ -108247,7 +108941,7 @@ synonym: "cellular amino acid homeostasis" EXACT [] is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:35238 ! regulates levels of amino-acid zwitterion -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:35238 ! regulates levels of amino-acid zwitterion created_by: dhl creation_date: 2010-01-27T04:47:27Z @@ -108259,7 +108953,7 @@ def: "Any process that modulates the rate, frequency or extent of fertilization. is_a: GO:2000241 ! regulation of reproductive process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0009566 ! regulates (processual) fertilization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0009566 ! regulates (processual) fertilization created_by: dhl creation_date: 2010-09-01T03:44:27Z @@ -108756,7 +109450,7 @@ is_a: GO:0010968 ! regulation of microtubule nucleation is_a: GO:0031116 ! positive regulation of microtubule polymerization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0007020 ! positively regulates microtubule nucleation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0007020 ! positively regulates microtubule nucleation created_by: tb creation_date: 2009-08-12T11:33:09Z @@ -108976,7 +109670,7 @@ is_a: GO:0055082 ! intracellular chemical homeostasis is_a: GO:0055088 ! lipid homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:26739 ! regulates levels of sphingolipid -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:26739 ! regulates levels of sphingolipid created_by: tb creation_date: 2009-12-08T08:21:36Z @@ -108993,7 +109687,7 @@ intersection_of: BFO:0000066 GO:0005829 ! occurs in cytosol intersection_of: RO:0002338 GO:0005794 ! has target start location Golgi apparatus intersection_of: RO:0002339 GO:0005764 ! has target end location lysosome relationship: BFO:0000066 GO:0005829 ! occurs in cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: RO:0002338 GO:0005794 ! has target start location Golgi apparatus relationship: RO:0002339 GO:0005764 ! has target end location lysosome @@ -109458,7 +110152,7 @@ is_a: GO:0061041 ! regulation of wound healing is_a: GO:1903036 ! positive regulation of response to wounding intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0042060 ! positively regulates wound healing -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: RO:0002213 GO:0042060 ! positively regulates wound healing created_by: tb @@ -109489,7 +110183,7 @@ is_a: GO:0033157 ! regulation of intracellular protein transport is_a: GO:0051222 ! positive regulation of protein transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006886 ! positively regulates intracellular protein transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006886 ! positively regulates intracellular protein transport created_by: tb creation_date: 2010-04-16T03:45:07Z @@ -109503,7 +110197,7 @@ is_a: GO:0033157 ! regulation of intracellular protein transport is_a: GO:0051224 ! negative regulation of protein transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006886 ! negatively regulates intracellular protein transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006886 ! negatively regulates intracellular protein transport created_by: tb creation_date: 2010-04-16T03:45:07Z @@ -109674,7 +110368,7 @@ synonym: "glutamate homeostasis" EXACT [] is_a: GO:0080144 ! intracellular amino acid homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:14321 ! regulates levels of glutamate(1-) -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:14321 ! regulates levels of glutamate(1-) property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24220" xsd:anyURI created_by: tb @@ -109816,7 +110510,7 @@ def: "The processes by which anatomical structures that are only present in the is_a: GO:0009653 ! anatomical structure morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: RO:0002298 UBERON:0014403 ! results in morphogenesis of male anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -109866,7 +110560,7 @@ is_a: GO:0098588 ! bounding membrane of organelle intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0048770 ! pigment granule relationship: bounding_layer_of GO:0048770 ! pigment granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0048770 ! pigment granule created_by: tb creation_date: 2017-05-16T22:33:39Z @@ -110251,7 +110945,7 @@ is_a: GO:0030667 ! secretory granule membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0042599 ! lamellar body relationship: bounding_layer_of GO:0042599 ! lamellar body -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: part_of GO:0042599 ! lamellar body created_by: pr @@ -110329,7 +111023,7 @@ is_a: GO:0055082 ! intracellular chemical homeostasis is_a: GO:0097272 ! ammonium homeostasis intersection_of: GO:0055082 ! intracellular chemical homeostasis intersection_of: RO:0002332 CHEBI:28938 ! regulates levels of ammonium -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:28938 ! regulates levels of ammonium created_by: pr creation_date: 2012-03-22T02:54:38Z @@ -110484,9 +111178,9 @@ name: microtubule bundle def: "An arrangement of closely apposed microtubules running parallel to each other." [NIF_Subcellular:sao1872343973] synonym: "microtubule fascicle" EXACT [] xref: NIF_Subcellular:sao1872343973 -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: has_part GO:0005874 ! microtubule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005856 ! cytoskeleton created_by: pr creation_date: 2012-11-07T15:01:27Z @@ -110837,7 +111531,7 @@ is_a: GO:0031982 ! vesicle is_a: GO:0043231 ! intracellular membrane-bounded organelle intersection_of: GO:0031982 ! vesicle intersection_of: part_of GO:0005622 ! intracellular anatomical structure -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005622 ! intracellular anatomical structure created_by: pr creation_date: 2016-03-29T17:39:45Z @@ -110982,7 +111676,7 @@ synonym: "de novo ciliary basal body assembly" RELATED [] synonym: "multiciliation" RELATED [] synonym: "multiciliogenesis" RELATED [] is_a: GO:0098534 ! centriole assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism created_by: pr creation_date: 2016-10-19T15:13:50Z @@ -111109,7 +111803,7 @@ is_a: GO:0031023 ! microtubule organizing center organization is_a: GO:0140694 ! membraneless organelle assembly intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0005814 ! results in assembly of centriole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0005814 ! results in assembly of centriole created_by: dos creation_date: 2013-10-22T15:55:22Z @@ -111230,7 +111924,7 @@ id: GO:0098594 name: mucin granule def: "A secretory granule that contains mucin." [PMID:16377632] is_a: GO:0030141 ! secretory granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 created_by: dos creation_date: 2014-03-11T15:59:11Z @@ -111579,7 +112273,7 @@ intersection_of: RO:0002338 GO:0005576 ! has target start location extracellular intersection_of: RO:0002339 GO:0005829 ! has target end location cytosol intersection_of: RO:0002342 GO:0005886 ! results in transport across plasma membrane intersection_of: RO:0004009 CHEBI:24875 ! has primary input iron cation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0005576 ! has target start location extracellular region relationship: RO:0002339 GO:0005829 ! has target end location cytosol relationship: RO:0002342 GO:0005886 ! results in transport across plasma membrane @@ -111670,7 +112364,7 @@ is_a: GO:0042078 ! germ-line stem cell division is_a: GO:0098722 ! asymmetric stem cell division intersection_of: GO:0008356 ! asymmetric cell division intersection_of: RO:0004009 CL:0000014 ! has primary input germ line stem cell -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4751 ! Fungi @@ -111756,7 +112450,7 @@ name: presynapse def: "The part of a synapse that is part of the presynaptic cell." [GOC:dos] subset: goslim_synapse synonym: "presynaptic terminal" EXACT [] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:6072 ! Eumetazoa relationship: part_of CL:0000540 ! neuron relationship: part_of GO:0045202 ! synapse @@ -111766,7 +112460,7 @@ id: GO:0098794 name: postsynapse def: "The part of a synapse that is part of the post-synaptic cell." [GOC:dos] subset: goslim_synapse -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: in_taxon NCBITaxon:33208 ! Metazoa relationship: part_of CL:0000000 ! cell relationship: part_of GO:0045202 ! synapse @@ -111875,7 +112569,7 @@ is_a: GO:0099118 ! microtubule-based protein transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002341 GO:0005874 ! results in transport along microtubule intersection_of: RO:0004009 PR:000000001 ! has primary input protein -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002341 GO:0005874 ! results in transport along microtubule relationship: RO:0004009 PR:000000001 ! has primary input protein @@ -111899,7 +112593,7 @@ is_a: GO:0005774 ! vacuolar membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0000323 ! lytic vacuole relationship: bounding_layer_of GO:0000323 ! lytic vacuole -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0000323 ! lytic vacuole [Term] @@ -111908,15 +112602,15 @@ name: actin-based cell projection def: "A cell projection supported by an assembly of actin filaments, and which lacks microtubules." [PMID:15661519] is_a: GO:0120025 ! plasma membrane bounded cell projection relationship: has_part GO:0005884 ! actin filament -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0098862 name: cluster of actin-based cell projections def: "A cell part consisting of multiple, closely packed actin-based cell projections." [GOC:dos] -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity relationship: has_part GO:0098858 ! actin-based cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of CL:0000000 ! cell [Term] @@ -112481,7 +113175,7 @@ id: GO:0099080 name: supramolecular complex def: "A cellular component that consists of an indeterminate number of proteins or macromolecular complexes, organized into a regular, higher-order structure such as a polymer, sheet, network or a fiber." [GOC:dos] subset: gocheck_do_not_annotate -is_a: GO:0110165 ! cellular anatomical structure +is_a: GO:0110165 ! cellular anatomical entity [Term] id: GO:0099081 @@ -112535,7 +113229,7 @@ is_a: GO:0007018 ! microtubule-based movement intersection_of: GO:0007018 ! microtubule-based movement intersection_of: has_part GO:0046785 ! microtubule polymerization relationship: has_part GO:0046785 ! microtubule polymerization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0099111 @@ -112558,7 +113252,7 @@ intersection_of: has_part GO:0046785 ! microtubule polymerization intersection_of: RO:0002608 GO:0005874 ! process has causal agent microtubule intersection_of: RO:0004009 CHEBI:36080 ! has primary input protein relationship: has_part GO:0046785 ! microtubule polymerization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002608 GO:0005874 ! process has causal agent microtubule relationship: RO:0004009 CHEBI:36080 ! has primary input protein @@ -112586,7 +113280,7 @@ is_a: GO:0051649 ! establishment of localization in cell intersection_of: GO:0014046 ! dopamine secretion intersection_of: BFO:0000066 GO:0036477 ! occurs in somatodendritic compartment relationship: BFO:0000066 GO:0036477 ! occurs in somatodendritic compartment -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0099124 @@ -112599,7 +113293,7 @@ is_a: GO:0051649 ! establishment of localization in cell intersection_of: GO:0014046 ! dopamine secretion intersection_of: BFO:0000066 GO:0030424 ! occurs in axon relationship: BFO:0000066 GO:0030424 ! occurs in axon -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0099140 @@ -112873,7 +113567,7 @@ is_a: GO:0030658 ! transport vesicle membrane intersection_of: GO:0016020 ! membrane intersection_of: bounding_layer_of GO:0070382 ! exocytic vesicle relationship: bounding_layer_of GO:0070382 ! exocytic vesicle -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0070382 ! exocytic vesicle [Term] @@ -112885,7 +113579,7 @@ is_a: GO:0031410 ! cytoplasmic vesicle intersection_of: GO:0031982 ! vesicle intersection_of: capable_of GO:0099500 ! vesicle fusion to plasma membrane relationship: capable_of GO:0099500 ! vesicle fusion to plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism [Term] id: GO:0099504 @@ -112918,7 +113612,7 @@ is_a: GO:0099512 ! supramolecular fiber intersection_of: GO:0099512 ! supramolecular fiber intersection_of: part_of GO:0005856 ! cytoskeleton intersection_of: RO:0000053 PATO:0015006 ! has characteristic polymeric -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005856 ! cytoskeleton relationship: RO:0000053 PATO:0015006 ! has characteristic polymeric @@ -112929,7 +113623,7 @@ def: "The transport of organelles or other particles from one location in the ce is_a: GO:0030705 ! cytoskeleton-dependent intracellular transport intersection_of: GO:0046907 ! intracellular transport intersection_of: RO:0002341 GO:0005884 ! results in transport along actin filament -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002341 GO:0005884 ! results in transport along actin filament created_by: tb creation_date: 2009-05-27T10:56:08Z @@ -112974,7 +113668,7 @@ synonym: "region of cytosol" EXACT [] is_a: GO:0005829 ! cytosol intersection_of: GO:0005829 ! cytosol intersection_of: part_of GO:0005829 ! cytosol -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005829 ! cytosol [Term] @@ -113248,7 +113942,7 @@ subset: gocheck_do_not_annotate is_a: GO:0005737 ! cytoplasm intersection_of: GO:0005737 ! cytoplasm intersection_of: part_of GO:0005737 ! cytoplasm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm [Term] @@ -113385,7 +114079,7 @@ intersection_of: RO:0002339 GO:0099523 ! has target end location presynaptic cyt intersection_of: RO:0002342 GO:0031090 ! results in transport across organelle membrane intersection_of: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) relationship: BFO:0000066 GO:0098793 ! occurs in presynapse -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0043231 ! has target start location intracellular membrane-bounded organelle relationship: RO:0002339 GO:0099523 ! has target end location presynaptic cytosol relationship: RO:0002342 GO:0031090 ! results in transport across organelle membrane @@ -113404,7 +114098,7 @@ intersection_of: RO:0002339 GO:0099524 ! has target end location postsynaptic cy intersection_of: RO:0002342 GO:0031090 ! results in transport across organelle membrane intersection_of: RO:0004009 CHEBI:29108 ! has primary input calcium(2+) relationship: BFO:0000066 GO:0098794 ! occurs in postsynapse -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002338 GO:0043231 ! has target start location intracellular membrane-bounded organelle relationship: RO:0002339 GO:0099524 ! has target end location postsynaptic cytosol relationship: RO:0002342 GO:0031090 ! results in transport across organelle membrane @@ -113466,7 +114160,7 @@ intersection_of: GO:0006810 ! transport intersection_of: BFO:0000066 GO:0005886 ! occurs in plasma membrane intersection_of: RO:0004009 PR:000000001 ! has primary input protein relationship: BFO:0000066 GO:0005886 ! occurs in plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0004009 PR:000000001 ! has primary input protein [Term] @@ -113572,7 +114266,7 @@ is_a: GO:0005938 ! cell cortex is_a: GO:0099568 ! cytoplasmic region intersection_of: GO:0005938 ! cell cortex intersection_of: part_of GO:0005938 ! cell cortex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005938 ! cell cortex [Term] @@ -114177,7 +114871,7 @@ creation_date: 2019-02-12T15:40:09Z [Term] id: GO:0110165 -name: cellular anatomical structure +name: cellular anatomical entity def: "A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses." [GOC:kmv] subset: gocheck_do_not_annotate subset: goslim_pir @@ -114185,6 +114879,10 @@ synonym: "cellular anatomical entity" EXACT [] is_a: CARO:0000000 ! anatomical entity is_a: GO:0005575 ! cellular_component is_a: UBERON:0000061 ! anatomical structure +disjoint_from: UBERON:0000001 ! gross anatomical part +relationship: has_part COB:0000013 ! molecule +property_value: editor_note "Components are larger than individual macromolecular entities. It is tricky to define distinction between 'cell component' and 'macromolecular entity', e.g. ribosome. We would like to exclude most protein complexes." xsd:string +property_value: editor_note "Overlaps with some cellular components from GO" xsd:string property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24200" xsd:anyURI property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26424" xsd:anyURI property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28978" xsd:anyURI @@ -114252,7 +114950,7 @@ is_a: GO:0042995 ! cell projection intersection_of: GO:0042995 ! cell projection intersection_of: has_part GO:0098590 ! plasma membrane region relationship: has_part GO:0098590 ! plasma membrane region -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/13193" xsd:anyURI created_by: krc creation_date: 2017-03-21T17:26:07Z @@ -114288,7 +114986,7 @@ is_a: GO:0030031 ! cell projection assembly is_a: GO:0120036 ! plasma membrane bounded cell projection organization intersection_of: GO:0022607 ! cellular component assembly intersection_of: RO:0002588 GO:0120025 ! results in assembly of plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002588 GO:0120025 ! results in assembly of plasma membrane bounded cell projection property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/13298" xsd:anyURI created_by: krc @@ -114302,7 +115000,7 @@ is_a: GO:0060491 ! regulation of cell projection assembly is_a: GO:0120035 ! regulation of plasma membrane bounded cell projection organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0120031 ! regulates (processual) plasma membrane bounded cell projection assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0120031 ! regulates (processual) plasma membrane bounded cell projection assembly property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/13298" xsd:anyURI created_by: krc @@ -114316,7 +115014,7 @@ is_a: GO:0031345 ! negative regulation of cell projection organization is_a: GO:0120032 ! regulation of plasma membrane bounded cell projection assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0120031 ! negatively regulates plasma membrane bounded cell projection assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0120031 ! negatively regulates plasma membrane bounded cell projection assembly property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/13298" xsd:anyURI created_by: krc @@ -114331,7 +115029,7 @@ is_a: GO:0044089 ! positive regulation of cellular component biogenesis is_a: GO:0120032 ! regulation of plasma membrane bounded cell projection assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0120031 ! positively regulates plasma membrane bounded cell projection assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0120031 ! positively regulates plasma membrane bounded cell projection assembly property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/13298" xsd:anyURI created_by: krc @@ -114368,7 +115066,7 @@ def: "The process in which the anatomical structures of a plasma membrane bounde is_a: GO:0048858 ! cell projection morphogenesis intersection_of: GO:0009653 ! anatomical structure morphogenesis intersection_of: RO:0002298 GO:0120025 ! results in morphogenesis of plasma membrane bounded cell projection -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002298 GO:0120025 ! results in morphogenesis of plasma membrane bounded cell projection property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/13298" xsd:anyURI created_by: krc @@ -114851,7 +115549,7 @@ def: "Any process that modulates the frequency, rate or extent of the deposition is_a: GO:0050789 ! regulation of biological process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0043473 ! regulates (processual) pigmentation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0043473 ! regulates (processual) pigmentation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/20524" xsd:anyURI created_by: krc @@ -115786,7 +116484,7 @@ def: "A homeostatic process involved in the maintenance of a steady state level is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:36976 ! regulates levels of nucleotide -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:36976 ! regulates levels of nucleotide property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24665" xsd:anyURI created_by: pg @@ -115799,7 +116497,7 @@ def: "A homeostatic process involved in the maintenance of a steady state level is_a: GO:0055082 ! intracellular chemical homeostasis intersection_of: GO:0019725 ! cellular homeostasis intersection_of: RO:0002332 CHEBI:33838 ! regulates levels of nucleoside -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002332 CHEBI:33838 ! regulates levels of nucleoside property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/24665" xsd:anyURI created_by: pg @@ -117908,7 +118606,7 @@ def: "Any process that modulates the frequency, rate or extent of cytoplasmic tr is_a: GO:0006448 ! regulation of translational elongation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0002182 ! regulates (processual) cytoplasmic translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0002182 ! regulates (processual) cytoplasmic translational elongation created_by: vw creation_date: 2012-04-03T05:07:02Z @@ -117926,7 +118624,7 @@ is_a: GO:1900247 ! regulation of cytoplasmic translational elongation is_a: GO:2000766 ! negative regulation of cytoplasmic translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0002182 ! negatively regulates cytoplasmic translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0002182 ! negatively regulates cytoplasmic translational elongation created_by: vw creation_date: 2012-04-03T05:07:14Z @@ -117943,7 +118641,7 @@ is_a: GO:0045901 ! positive regulation of translational elongation is_a: GO:1900247 ! regulation of cytoplasmic translational elongation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0002182 ! positively regulates cytoplasmic translational elongation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0002182 ! positively regulates cytoplasmic translational elongation created_by: vw creation_date: 2012-04-03T05:07:24Z @@ -118808,7 +119506,7 @@ synonym: "regulation of translation initiation ternary complex assembly" EXACT [ is_a: GO:0043254 ! regulation of protein-containing complex assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0001677 ! regulates (processual) formation of translation initiation ternary complex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0001677 ! regulates (processual) formation of translation initiation ternary complex created_by: ss creation_date: 2012-07-25T02:26:58Z @@ -118831,7 +119529,7 @@ is_a: GO:0045947 ! negative regulation of translational initiation is_a: GO:1901190 ! regulation of formation of translation initiation ternary complex intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0001677 ! negatively regulates formation of translation initiation ternary complex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0001677 ! negatively regulates formation of translation initiation ternary complex created_by: ss creation_date: 2012-07-25T02:27:21Z @@ -118853,7 +119551,7 @@ is_a: GO:0031334 ! positive regulation of protein-containing complex assembly is_a: GO:1901190 ! regulation of formation of translation initiation ternary complex intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0001677 ! positively regulates formation of translation initiation ternary complex -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0001677 ! positively regulates formation of translation initiation ternary complex created_by: ss creation_date: 2012-07-25T02:27:29Z @@ -120052,7 +120750,7 @@ def: "Any process that modulates the frequency, rate or extent of Golgi calcium is_a: GO:0051279 ! regulation of release of sequestered calcium ion into cytosol intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0061454 ! regulates (processual) release of sequestered calcium ion into cytosol by Golgi -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0061454 ! regulates (processual) release of sequestered calcium ion into cytosol by Golgi created_by: al creation_date: 2012-10-03T07:26:03Z @@ -124351,7 +125049,7 @@ synonym: "regulation of ventral/lateral system" RELATED [GOC:TermGenie] is_a: GO:0051239 ! regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0009880 ! regulates (processual) embryonic pattern specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -124377,7 +125075,7 @@ is_a: GO:0051241 ! negative regulation of multicellular organismal process is_a: GO:1902875 ! regulation of embryonic pattern specification intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0009880 ! negatively regulates embryonic pattern specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -124403,7 +125101,7 @@ is_a: GO:0051240 ! positive regulation of multicellular organismal process is_a: GO:1902875 ! regulation of embryonic pattern specification intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0009880 ! positively regulates embryonic pattern specification -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -125221,7 +125919,7 @@ synonym: "regulation of melanosome organization and biogenesis" RELATED [GOC:Ter is_a: GO:0033043 ! regulation of organelle organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0032438 ! regulates (processual) melanosome organization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0032438 ! regulates (processual) melanosome organization created_by: rl creation_date: 2014-05-27T13:27:49Z @@ -125249,7 +125947,7 @@ is_a: GO:0010639 ! negative regulation of organelle organization is_a: GO:1903056 ! regulation of melanosome organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0032438 ! negatively regulates melanosome organization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0032438 ! negatively regulates melanosome organization created_by: rl creation_date: 2014-05-27T13:27:55Z @@ -125277,7 +125975,7 @@ is_a: GO:0010638 ! positive regulation of organelle organization is_a: GO:1903056 ! regulation of melanosome organization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0032438 ! positively regulates melanosome organization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0032438 ! positively regulates melanosome organization created_by: rl creation_date: 2014-05-27T13:28:01Z @@ -126106,7 +126804,7 @@ def: "Any process that modulates the frequency, rate or extent of vacuolar trans is_a: GO:0032386 ! regulation of intracellular transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0007034 ! regulates (processual) vacuolar transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0007034 ! regulates (processual) vacuolar transport created_by: vw creation_date: 2014-08-18T13:16:04Z @@ -126123,7 +126821,7 @@ is_a: GO:0032387 ! negative regulation of intracellular transport is_a: GO:1903335 ! regulation of vacuolar transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0007034 ! negatively regulates vacuolar transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0007034 ! negatively regulates vacuolar transport created_by: vw creation_date: 2014-08-18T13:16:11Z @@ -126140,7 +126838,7 @@ is_a: GO:0032388 ! positive regulation of intracellular transport is_a: GO:1903335 ! regulation of vacuolar transport intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0007034 ! positively regulates vacuolar transport -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0007034 ! positively regulates vacuolar transport created_by: vw creation_date: 2014-08-18T13:16:19Z @@ -126322,7 +127020,7 @@ synonym: "regulation of functional differentiation" RELATED [GOC:TermGenie] is_a: GO:0060284 ! regulation of cell development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0048469 ! regulates (processual) cell maturation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0048469 ! regulates (processual) cell maturation created_by: jl creation_date: 2014-09-15T13:31:23Z @@ -126344,7 +127042,7 @@ is_a: GO:0010721 ! negative regulation of cell development is_a: GO:1903429 ! regulation of cell maturation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0048469 ! negatively regulates cell maturation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0048469 ! negatively regulates cell maturation created_by: jl creation_date: 2014-09-15T13:31:32Z @@ -126366,7 +127064,7 @@ is_a: GO:0010720 ! positive regulation of cell development is_a: GO:1903429 ! regulation of cell maturation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0048469 ! positively regulates cell maturation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0048469 ! positively regulates cell maturation created_by: jl creation_date: 2014-09-15T13:31:41Z @@ -129059,7 +129757,7 @@ synonym: "regulation of cell blebbing" EXACT [GOC:TermGenie] is_a: GO:0120032 ! regulation of plasma membrane bounded cell projection assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0032060 ! regulates (processual) bleb assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0032060 ! regulates (processual) bleb assembly created_by: als creation_date: 2015-04-23T09:32:19Z @@ -129081,7 +129779,7 @@ is_a: GO:0120033 ! negative regulation of plasma membrane bounded cell projectio is_a: GO:1904170 ! regulation of bleb assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0032060 ! negatively regulates bleb assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0032060 ! negatively regulates bleb assembly created_by: als creation_date: 2015-04-23T09:32:25Z @@ -129103,7 +129801,7 @@ is_a: GO:0120034 ! positive regulation of plasma membrane bounded cell projectio is_a: GO:1904170 ! regulation of bleb assembly intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0032060 ! positively regulates bleb assembly -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0032060 ! positively regulates bleb assembly created_by: als creation_date: 2015-04-23T09:32:31Z @@ -129431,7 +130129,7 @@ synonym: "peripheral cytoplasm of leading edge of cell" RELATED [GOC:TermGenie] is_a: GO:0099738 ! cell cortex region intersection_of: GO:0099738 ! cell cortex region intersection_of: part_of GO:0031252 ! cell leading edge -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4751 ! Fungi relationship: part_of GO:0031252 ! cell leading edge created_by: kmv @@ -130230,7 +130928,7 @@ is_a: GO:0034759 ! regulation of iron ion transmembrane transport is_a: GO:0060341 ! regulation of cellular localization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0098711 ! regulates (processual) iron ion import across plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0098711 ! regulates (processual) iron ion import across plasma membrane created_by: rl creation_date: 2015-03-04T14:37:36Z @@ -130255,7 +130953,7 @@ is_a: GO:0034760 ! negative regulation of iron ion transmembrane transport is_a: GO:1904438 ! regulation of iron ion import across plasma membrane intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0098711 ! negatively regulates iron ion import across plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0098711 ! negatively regulates iron ion import across plasma membrane created_by: rl creation_date: 2015-07-06T13:49:58Z @@ -130280,7 +130978,7 @@ is_a: GO:0034761 ! positive regulation of iron ion transmembrane transport is_a: GO:1904438 ! regulation of iron ion import across plasma membrane intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0098711 ! positively regulates iron ion import across plasma membrane -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0098711 ! positively regulates iron ion import across plasma membrane created_by: rl creation_date: 2015-07-06T13:50:04Z @@ -130719,7 +131417,7 @@ synonym: "negative regulation of cell differentiation involved in maintenance of is_a: GO:0045596 ! negative regulation of cell differentiation intersection_of: GO:0045596 ! negative regulation of cell differentiation intersection_of: part_of GO:0019827 ! stem cell population maintenance -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -130869,7 +131567,7 @@ is_a: GO:0006446 ! regulation of translational initiation is_a: GO:2000765 ! regulation of cytoplasmic translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0002183 ! regulates (processual) cytoplasmic translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0002183 ! regulates (processual) cytoplasmic translational initiation property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/21560" xsd:anyURI created_by: dos @@ -130887,7 +131585,7 @@ is_a: GO:0045947 ! negative regulation of translational initiation is_a: GO:1904688 ! regulation of cytoplasmic translational initiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0002183 ! negatively regulates cytoplasmic translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0002183 ! negatively regulates cytoplasmic translational initiation created_by: dos creation_date: 2015-09-25T14:39:44Z @@ -130904,7 +131602,7 @@ is_a: GO:0045948 ! positive regulation of translational initiation is_a: GO:1904688 ! regulation of cytoplasmic translational initiation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0002183 ! positively regulates cytoplasmic translational initiation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0002183 ! positively regulates cytoplasmic translational initiation created_by: dos creation_date: 2015-09-25T14:39:50Z @@ -134866,7 +135564,7 @@ is_a: GO:0080154 ! regulation of fertilization is_a: GO:2000243 ! positive regulation of reproductive process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0009566 ! positively regulates fertilization -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0009566 ! positively regulates fertilization created_by: pr creation_date: 2016-09-30T14:32:32Z @@ -135623,7 +136321,7 @@ synonym: "microtubule fascicle of cytoplasm" EXACT [GOC:TermGenie] is_a: GO:0097427 ! microtubule bundle intersection_of: GO:0097427 ! microtubule bundle intersection_of: part_of GO:0005737 ! cytoplasm -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: part_of GO:0005737 ! cytoplasm created_by: mah creation_date: 2016-11-24T16:52:02Z @@ -136037,7 +136735,7 @@ is_a: GO:0010968 ! regulation of microtubule nucleation is_a: GO:0031115 ! negative regulation of microtubule polymerization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0007020 ! negatively regulates microtubule nucleation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0007020 ! negatively regulates microtubule nucleation created_by: hbye creation_date: 2017-01-17T12:00:56Z @@ -136496,7 +137194,7 @@ is_a: GO:0050793 ! regulation of developmental process is_a: GO:2000241 ! regulation of reproductive process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0008406 ! regulates (processual) gonad development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -136524,7 +137222,7 @@ is_a: GO:1905939 ! regulation of gonad development is_a: GO:2000242 ! negative regulation of reproductive process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0008406 ! negatively regulates gonad development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -136552,7 +137250,7 @@ is_a: GO:1905939 ! regulation of gonad development is_a: GO:2000243 ! positive regulation of reproductive process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0008406 ! positively regulates gonad development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -137056,7 +137754,7 @@ synonym: "dense core vesicle maturation" EXACT [] is_a: GO:0061792 ! secretory granule maturation intersection_of: GO:0021700 ! developmental maturation intersection_of: RO:0002299 GO:0031045 ! results in maturation of dense core granule -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:4890 relationship: RO:0002299 GO:0031045 ! results in maturation of dense core granule created_by: kmv @@ -137109,7 +137807,7 @@ is_a: GO:0006449 ! regulation of translational termination is_a: GO:2000765 ! regulation of cytoplasmic translation intersection_of: GO:0050789 ! regulation of biological process intersection_of: RO:0002211 GO:0002184 ! regulates (processual) cytoplasmic translational termination -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0002184 ! regulates (processual) cytoplasmic translational termination created_by: vw creation_date: 2014-12-10T15:48:55Z @@ -137413,7 +138111,7 @@ synonym: "regulation of testis development" EXACT [GOC:obol] is_a: GO:1905939 ! regulation of gonad development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0008584 ! regulates (processual) male gonad development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -137432,7 +138130,7 @@ is_a: GO:1905940 ! negative regulation of gonad development is_a: GO:2000018 ! regulation of male gonad development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0008584 ! negatively regulates male gonad development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -137451,7 +138149,7 @@ is_a: GO:1905941 ! positive regulation of gonad development is_a: GO:2000018 ! regulation of male gonad development intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0008584 ! positively regulates male gonad development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -137468,7 +138166,7 @@ is_a: GO:0050793 ! regulation of developmental process is_a: GO:0051239 ! regulation of multicellular organismal process intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0007275 ! regulates (processual) multicellular organism development -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: never_in_taxon NCBITaxon:2 relationship: never_in_taxon NCBITaxon:2157 relationship: never_in_taxon NCBITaxon:4896 @@ -138428,7 +139126,7 @@ is_a: GO:0046831 ! regulation of RNA export from nucleus is_a: GO:2000197 ! regulation of ribonucleoprotein complex localization intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0006409 ! regulates (processual) tRNA export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0006409 ! regulates (processual) tRNA export from nucleus created_by: mah creation_date: 2010-11-10T12:39:33Z @@ -138446,7 +139144,7 @@ is_a: GO:2000198 ! negative regulation of ribonucleoprotein complex localization is_a: GO:2000238 ! regulation of tRNA export from nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0006409 ! negatively regulates tRNA export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0006409 ! negatively regulates tRNA export from nucleus created_by: mah creation_date: 2010-11-10T12:39:36Z @@ -138464,7 +139162,7 @@ is_a: GO:2000199 ! positive regulation of ribonucleoprotein complex localization is_a: GO:2000238 ! regulation of tRNA export from nucleus intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0006409 ! positively regulates tRNA export from nucleus -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0006409 ! positively regulates tRNA export from nucleus created_by: mah creation_date: 2010-11-10T12:39:38Z @@ -140294,7 +140992,7 @@ def: "Any process that modulates the frequency, rate or extent of cytoplasmic tr is_a: GO:0006417 ! regulation of translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002211 GO:0002181 ! regulates (processual) cytoplasmic translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002211 GO:0002181 ! regulates (processual) cytoplasmic translation created_by: vw creation_date: 2011-06-20T10:39:19Z @@ -140307,7 +141005,7 @@ is_a: GO:0017148 ! negative regulation of translation is_a: GO:2000765 ! regulation of cytoplasmic translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002212 GO:0002181 ! negatively regulates cytoplasmic translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002212 GO:0002181 ! negatively regulates cytoplasmic translation created_by: vw creation_date: 2011-06-20T10:39:23Z @@ -140320,7 +141018,7 @@ is_a: GO:0045727 ! positive regulation of translation is_a: GO:2000765 ! regulation of cytoplasmic translation intersection_of: GO:0065007 ! biological regulation intersection_of: RO:0002213 GO:0002181 ! positively regulates cytoplasmic translation -relationship: in_taxon NCBITaxon:131567 ! cellular organisms +relationship: in_taxon NCBITaxon:131567 ! cellular organism relationship: RO:0002213 GO:0002181 ! positively regulates cytoplasmic translation created_by: vw creation_date: 2011-06-20T10:39:26Z @@ -142057,11 +142755,14 @@ creation_date: 2025-08-01T12:00:00Z [Term] id: IAO:0000027 name: data item +def: "An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements." [] is_a: IAO:0000030 ! information content entity [Term] id: IAO:0000030 name: information content entity +def: "A generically dependent continuant that is about some thing." [] +property_value: editor_note "Pier: 'data, information or knowledge'. OR 'representation'" xsd:string [Term] id: IAO:0000078 @@ -142753,9 +143454,10 @@ disjoint_from: NCBITaxon:33511 ! Deuterostomia [Term] id: NCBITaxon:131567 -name: cellular organisms +name: cellular organism synonym: "biota" RELATED synonym [] xref: GC_ID:1 +is_a: COB:0000022 ! organism is_a: NCBITaxon:1 ! root [Term] @@ -143093,6 +143795,7 @@ is_a: NCBITaxon:6657 ! Crustacea [Term] id: NCBITaxon:2182372 name: Osphranter +synonym: "wallaroos" EXACT OMO:0003003 [] xref: GC_ID:1 is_a: NCBITaxon:9307 ! Macropodidae disjoint_from: NCBITaxon:9312 ! Macropus @@ -143187,7 +143890,7 @@ synonym: "eukaryotes" RELATED blast_name [] xref: GC_ID:1 xref: PMID:23020233 xref: PMID:30257078 -is_a: NCBITaxon:131567 ! cellular organisms +is_a: NCBITaxon:131567 ! cellular organism [Term] id: NCBITaxon:28376 @@ -143647,6 +144350,15 @@ name: Pantherinae xref: GC_ID:1 is_a: NCBITaxon:9681 ! Felidae +[Term] +id: NCBITaxon:3466516 +name: Afrosoricida +xref: GC_ID:1 +is_a: NCBITaxon:311790 ! Afrotheria +disjoint_from: NCBITaxon:9774 ! Sirenia +disjoint_from: NCBITaxon:9779 ! Proboscidea +disjoint_from: NCBITaxon:9815 ! Tubulidentata + [Term] id: NCBITaxon:34989 name: Colubroidea @@ -144134,6 +144846,9 @@ is_a: NCBITaxon:9604 ! Hominidae [Term] id: NCBITaxon:6157 name: Platyhelminthes +alt_id: NCBITaxon:1312378 +alt_id: NCBITaxon:1312379 +alt_id: NCBITaxon:166384 synonym: "flatworm" EXACT OMO:0003003 [] synonym: "flatworms" EXACT genbank_common_name [] synonym: "flatworms" RELATED blast_name [] @@ -144275,6 +144990,7 @@ disjoint_from: NCBITaxon:7568 ! Brachiopoda [Term] id: NCBITaxon:6341 name: Polychaeta +alt_id: NCBITaxon:725122 synonym: "polychaetes" EXACT genbank_common_name [] xref: GC_ID:1 is_a: NCBITaxon:6340 ! Annelida @@ -144420,8 +145136,8 @@ is_a: NCBITaxon:70861 ! unclassified Teleostei [Term] id: NCBITaxon:7088 name: Lepidoptera -synonym: "moths" RELATED blast_name [] synonym: "moths & butterflies" EXACT genbank_common_name [] +synonym: "moths & butterflies" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:85604 ! Amphiesmenoptera @@ -144796,11 +145512,11 @@ is_a: NCBITaxon:7895 ! Coelacanthidae id: NCBITaxon:7898 name: Actinopterygii synonym: "Actinopterygi" RELATED synonym [] -synonym: "bony fishes" RELATED blast_name [] synonym: "fish" EXACT OMO:0003003 [] synonym: "fishes" EXACT OMO:0003003 [] synonym: "Osteichthyes" RELATED in_part [] synonym: "ray-finned fishes" EXACT genbank_common_name [] +synonym: "ray-finned fishes" RELATED blast_name [] xref: GC_ID:1 is_a: NCBITaxon:117571 ! Euteleostomi disjoint_from: NCBITaxon:8287 ! Sarcopterygii @@ -145634,10 +146350,7 @@ id: NCBITaxon:9369 name: Tenrecidae synonym: "tenrecs" EXACT genbank_common_name [] xref: GC_ID:1 -is_a: NCBITaxon:311790 ! Afrotheria -disjoint_from: NCBITaxon:9774 ! Sirenia -disjoint_from: NCBITaxon:9779 ! Proboscidea -disjoint_from: NCBITaxon:9815 ! Tubulidentata +is_a: NCBITaxon:3466516 ! Afrosoricida [Term] id: NCBITaxon:9373 @@ -147562,7 +148275,6 @@ def: "An amino acid chain that is canonically produced de novo by ribosome-media comment: Note that the definition allows for experimentally-manipulated genes, and allows for artifically-produced derivatives that mimic those found naturally. Note also that the definition excludes protein complexes, which some also consider a protein. Those who wish to refer to a class representing both senses of the word are directed to PR:000064867 ("protein-containing molecular entity"). Proteins (in the sense defined here) that descended from a common ancestor can be classified into families and superfamilies composed of products of evolutionarily-related genes. The domain architecture of a protein is described by the order of its constituent domains. Proteins with the same domains in the same order are defined as homeomorphic [PRO:WCB). synonym: "native protein" NARROW [IEDB:BP] synonym: "natural protein" EXACT [PRO:DAN] -is_a: BFO:0000002 ! continuant is_a: PR:000018263 ! amino acid chain intersection_of: PR:000018263 ! amino acid chain intersection_of: has_gene_template SO:0001217 @@ -148759,6 +149471,53 @@ synonym: "ter119" EXACT [] is_a: PR:000029032 ! Mus musculus protein relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +[Term] +id: PR:000003262 +name: collagen alpha chain +def: "A protein that is a component of collagen. Collagens are trimeric molecules in which each chain comprises a repeating Gly-X-Y triplet, in which X and Y can be any residue but are usually proline and hydroxyproline, respectively. This results in a left-handed helix that combines with other two to form a triple-helical structure." [Pfam:PF01391, PMID:15788652, PMID:1639194] +comment: Category=family. +is_a: PR:000000001 ! protein + +[Term] +id: PR:000003263 +name: collagen type I alpha chain +def: "A collagen alpha chain that is a translation product of the human COL1A1 or COL1A2 genes, 1:1 orthologs thereof, or a semi-ortholog thereof." [PRO:CNA, PRO:DAN] +comment: Category=family. +is_a: PR:000003262 ! collagen alpha chain + +[Term] +id: PR:000003264 +name: collagen alpha-1(I) chain +def: "A collagen type I alpha chain that is a translation product of the human COL1A1 gene or a 1:1 ortholog thereof." [PRO:CNA] +comment: Category=gene. +synonym: "alpha-1 type I collagen" EXACT [] +synonym: "COL1A1" EXACT PRO-short-label [PRO:DNx] +synonym: "Cola1" RELATED Gene-based [] +is_a: PR:000003263 ! collagen type I alpha chain + +[Term] +id: PR:000003328 +name: collagen alpha-1(III) chain +def: "A collagen alpha chain that is a translation product of the human COL3A1 gene or a 1:1 ortholog thereof." [PRO:CNA] +comment: Category=gene. +synonym: "COL3A1" EXACT PRO-short-label [PRO:DNx] +is_a: PR:000003262 ! collagen alpha chain + +[Term] +id: PR:000003353 +name: collagen alpha-1(VI) chain +def: "A collagen type VI alpha chain that is a translation product of the human COL6A1 gene or a 1:1 ortholog thereof." [PRO:CNA] +comment: Category=gene. +synonym: "COL6A1" EXACT PRO-short-label [PRO:DNx] +is_a: PR:000003386 ! collagen type VI alpha chain + +[Term] +id: PR:000003386 +name: collagen type VI alpha chain +def: "A collagen alpha chain that is a translation product of the human COL6A1, COL6A2, or COL6A3 genes, 1:1 orthologs thereof, or a semi-ortholog thereof." [PMID:15788652, PRO:CNA, PRO:DAN] +comment: Category=family. +is_a: PR:000003262 ! collagen alpha chain + [Term] id: PR:000003457 name: V(D)J recombination-activating protein 1 @@ -148807,6 +149566,14 @@ synonym: "CEBP" RELATED Gene-based [] synonym: "CEBPA" EXACT PRO-short-label [PRO:DNx] is_a: PR:000000001 ! protein +[Term] +id: PR:000005693 +name: collagen alpha-1(X) chain +def: "A protein that is a translation product of the human COL10A1 gene or a 1:1 ortholog thereof." [PRO:DNx] +comment: Category=gene. +synonym: "COL10A1" EXACT PRO-short-label [PRO:DNx] +is_a: PR:000000001 ! protein + [Term] id: PR:000006611 name: DNA nucleotidylexotransferase @@ -149052,7 +149819,7 @@ def: "A molecule that consists of amino acid residues (unmodified amino-acid res comment: Category=polymer. synonym: "peptide" NARROW [PRO:DAN] synonym: "polypeptide" NARROW [PRO:DAN] -is_a: COB:0000013 +is_a: COB:0000013 ! molecule relationship: RO:0020337 CHEBI:33708 {minCardinality="2"} ! amino-acid residue [Term] @@ -149151,6 +149918,30 @@ intersection_of: PR:000001945 ! transferrin receptor protein 1 intersection_of: output_of GO:0016485 ! protein processing relationship: output_of GO:0016485 ! protein processing +[Term] +id: PR:000018798 +name: collagen alpha-1(I) chain proteolytic cleavage product +def: "A collagen alpha-1(I) chain that has been processed by proteolytic cleavage." [PRO:DNx] +comment: Category=modification. +synonym: "COL1A1/ClvPrd" EXACT PRO-short-label [PRO:DNx] +is_a: PR:000003264 ! collagen alpha-1(I) chain +is_a: PR:000018264 ! proteolytic cleavage product +intersection_of: PR:000003264 ! collagen alpha-1(I) chain +intersection_of: output_of GO:0016485 ! protein processing +relationship: output_of GO:0016485 ! protein processing + +[Term] +id: PR:000018809 +name: collagen alpha-1(III) chain proteolytic cleavage product +def: "A collagen alpha-1(III) chain that has been processed by proteolytic cleavage." [PRO:DNx] +comment: Category=modification. +synonym: "COL3A1/ClvPrd" EXACT PRO-short-label [PRO:DNx] +is_a: PR:000003328 ! collagen alpha-1(III) chain +is_a: PR:000018264 ! proteolytic cleavage product +intersection_of: PR:000003328 ! collagen alpha-1(III) chain +intersection_of: output_of GO:0016485 ! protein processing +relationship: output_of GO:0016485 ! protein processing + [Term] id: PR:000020329 name: integrin alpha-IIb proteolytic cleavage product @@ -149199,6 +149990,18 @@ intersection_of: PR:000014841 ! sonic hedgehog protein intersection_of: output_of GO:0016485 ! protein processing relationship: output_of GO:0016485 ! protein processing +[Term] +id: PR:000025420 +name: collagen alpha-1(VI) chain proteolytic cleavage product +def: "A collagen alpha-1(VI) chain that has been processed by proteolytic cleavage." [PRO:DNx] +comment: Category=modification. +synonym: "COL6A1/ClvPrd" EXACT PRO-short-label [PRO:DNx] +is_a: PR:000003353 ! collagen alpha-1(VI) chain +is_a: PR:000018264 ! proteolytic cleavage product +intersection_of: PR:000003353 ! collagen alpha-1(VI) chain +intersection_of: output_of GO:0016485 ! protein processing +relationship: output_of GO:0016485 ! protein processing + [Term] id: PR:000025455 name: CD2 molecule proteolytic cleavage product @@ -149319,7 +150122,6 @@ synonym: "7TM receptor" BROAD [IUPHARfam:694] synonym: "fam:GPCR" EXACT PRO-short-label [PRO:DAN] synonym: "seven-transmembrane receptor" BROAD [IUPHARfam:694] xref: IUPHARfam:694 -is_a: BFO:0000040 ! material entity is_a: PR:000000001 ! protein intersection_of: PR:000000001 ! protein intersection_of: capable_of GO:0004930 ! G protein-coupled receptor activity @@ -149834,6 +150636,35 @@ intersection_of: PR:000001843 ! Thy-1 membrane glycoprotein intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +[Term] +id: PR:P02452 +name: collagen alpha-1(I) chain (human) +def: "A collagen alpha-1(I) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P02452] +comment: Category=organism-gene. +synonym: "alpha-1 type I collagen (human)" EXACT [UniProtKB:P02452] +synonym: "COL1A1" RELATED Gene-based [UniProtKB:P02452] +synonym: "hCOL1A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:P02452 +is_a: PR:000003264 ! collagen alpha-1(I) chain +is_a: PR:000029067 ! Homo sapiens protein +intersection_of: PR:000003264 ! collagen alpha-1(I) chain +intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens + +[Term] +id: PR:P02461 +name: collagen alpha-1(III) chain (human) +def: "A collagen alpha-1(III) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P02461] +comment: Category=organism-gene. +synonym: "COL3A1" RELATED Gene-based [UniProtKB:P02461] +synonym: "hCOL3A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:P02461 +is_a: PR:000003328 ! collagen alpha-1(III) chain +is_a: PR:000029067 ! Homo sapiens protein +intersection_of: PR:000003328 ! collagen alpha-1(III) chain +intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens + [Term] id: PR:P02686 name: myelin basic protein (human) @@ -150231,6 +151062,34 @@ intersection_of: PR:000001479 ! low affinity immunoglobulin gamma Fc region rece intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +[Term] +id: PR:P08121 +name: collagen alpha-1(III) chain (mouse) +def: "A collagen alpha-1(III) chain that is encoded in the genome of mouse." [OMA:P08121, PRO:DNx] +comment: Category=organism-gene. +synonym: "Col3a1" RELATED Gene-based [UniProtKB:P08121] +synonym: "mCOL3A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:P08121 +is_a: PR:000003328 ! collagen alpha-1(III) chain +is_a: PR:000029032 ! Mus musculus protein +intersection_of: PR:000003328 ! collagen alpha-1(III) chain +intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus + +[Term] +id: PR:P08125 +name: collagen alpha-1(X) chain (chicken) +def: "A collagen alpha-1(X) chain that is encoded in the genome of chicken." [OMA:P08125, PRO:DNx] +comment: Category=organism-gene. +synonym: "chick-COL10A1" EXACT PRO-short-label [PRO:DNx] +synonym: "COL10A1" RELATED Gene-based [UniProtKB:P08125] +xref: UniProtKB:P08125 +is_a: PR:000005693 ! collagen alpha-1(X) chain +is_a: PR:000029063 ! Gallus gallus protein +intersection_of: PR:000005693 ! collagen alpha-1(X) chain +intersection_of: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus +relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus + [Term] id: PR:P08473 name: neprilysin (human) @@ -150512,6 +151371,22 @@ intersection_of: PR:000001889 ! CD14 molecule intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +[Term] +id: PR:P11087 +name: collagen alpha-1(I) chain (mouse) +def: "A collagen alpha-1(I) chain that is encoded in the genome of mouse." [OMA:P11087, PRO:DNx] +comment: Category=organism-gene. +synonym: "alpha-1 type I collagen (mouse)" EXACT [UniProtKB:P11087] +synonym: "Col1a1" RELATED Gene-based [UniProtKB:P11087] +synonym: "Cola1" RELATED Gene-based [UniProtKB:P11087] +synonym: "mCOL1A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:P11087 +is_a: PR:000003264 ! collagen alpha-1(I) chain +is_a: PR:000029032 ! Mus musculus protein +intersection_of: PR:000003264 ! collagen alpha-1(I) chain +intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus + [Term] id: PR:P11215 name: integrin alpha-M (human) @@ -150588,6 +151463,20 @@ intersection_of: PR:000001858 ! immunoglobulin iota chain intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +[Term] +id: PR:P12109 +name: collagen alpha-1(VI) chain (human) +def: "A collagen alpha-1(VI) chain that is encoded in the genome of human." [PRO:CNA, UniProtKB:P12109] +comment: Category=organism-gene. +synonym: "COL6A1" RELATED Gene-based [UniProtKB:P12109] +synonym: "hCOL6A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:P12109 +is_a: PR:000003353 ! collagen alpha-1(VI) chain +is_a: PR:000029067 ! Homo sapiens protein +intersection_of: PR:000003353 ! collagen alpha-1(VI) chain +intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens + [Term] id: PR:P13379 name: T-cell surface glycoprotein CD5 (mouse) @@ -151293,6 +152182,20 @@ intersection_of: PR:000001013 ! integrin alpha-X intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +[Term] +id: PR:P20785 +name: collagen alpha-1(VI) chain (chicken) +def: "A collagen alpha-1(VI) chain that is encoded in the genome of chicken." [OMA:P20785, PRO:DNx] +comment: Category=organism-gene. +synonym: "chick-COL6A1" EXACT PRO-short-label [PRO:DNx] +synonym: "COL6A1" RELATED Gene-based [UniProtKB:P20785] +xref: UniProtKB:P20785 +is_a: PR:000003353 ! collagen alpha-1(VI) chain +is_a: PR:000029063 ! Gallus gallus protein +intersection_of: PR:000003353 ! collagen alpha-1(VI) chain +intersection_of: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus +relationship: RO:0002160 NCBITaxon:9031 ! only in taxon Gallus gallus + [Term] id: PR:P21183 name: interleukin-5 receptor subunit alpha (mouse) @@ -152204,6 +153107,34 @@ intersection_of: PR:000001969 ! urokinase plasminogen activator surface receptor intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +[Term] +id: PR:Q03692 +name: collagen alpha-1(X) chain (human) +def: "A collagen alpha-1(X) chain that is encoded in the genome of human." [PRO:DNx, UniProtKB:Q03692] +comment: Category=organism-gene. +synonym: "COL10A1" RELATED Gene-based [UniProtKB:Q03692] +synonym: "hCOL10A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:Q03692 +is_a: PR:000005693 ! collagen alpha-1(X) chain +is_a: PR:000029067 ! Homo sapiens protein +intersection_of: PR:000005693 ! collagen alpha-1(X) chain +intersection_of: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens +relationship: RO:0002160 NCBITaxon:9606 ! only in taxon Homo sapiens + +[Term] +id: PR:Q04857 +name: collagen alpha-1(VI) chain (mouse) +def: "A collagen alpha-1(VI) chain that is encoded in the genome of mouse." [OMA:Q04857, PRO:DNx] +comment: Category=organism-gene. +synonym: "Col6a1" RELATED Gene-based [UniProtKB:Q04857] +synonym: "mCOL6A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:Q04857 +is_a: PR:000003353 ! collagen alpha-1(VI) chain +is_a: PR:000029032 ! Mus musculus protein +intersection_of: PR:000003353 ! collagen alpha-1(VI) chain +intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus + [Term] id: PR:Q05117 name: tartrate-resistant acid phosphatase type 5 (mouse) @@ -152224,6 +153155,20 @@ intersection_of: PR:000001937 ! tartrate-resistant acid phosphatase type 5 intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +[Term] +id: PR:Q05306 +name: collagen alpha-1(X) chain (mouse) +def: "A collagen alpha-1(X) chain that is encoded in the genome of mouse." [OMA:Q05306, PRO:DNx] +comment: Category=organism-gene. +synonym: "Col10a1" RELATED Gene-based [UniProtKB:Q05306] +synonym: "mCOL10A1" EXACT PRO-short-label [PRO:DNx] +xref: UniProtKB:Q05306 +is_a: PR:000005693 ! collagen alpha-1(X) chain +is_a: PR:000029032 ! Mus musculus protein +intersection_of: PR:000005693 ! collagen alpha-1(X) chain +intersection_of: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus +relationship: RO:0002160 NCBITaxon:10090 ! only in taxon Mus musculus + [Term] id: PR:Q07075 name: glutamyl aminopeptidase (human) @@ -152901,20 +153846,25 @@ property_value: editor_note "May be replaced by a BFO class, as discussed in htt [Term] id: UBERON:0000000 -name: processual entity -def: "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] -comment: This term is being aligned with COB -subset: common_anatomy +name: obsolete processual entity +def: "OBSOLETE: An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity." [span:ProcessualEntity] +comment: "This term has been deprecated in favour of BFO:0000015 ('process' in COB)" subset: human_subset subset: mouse_subset -subset: upper_level -xref: BFO:0000003 is_a: BFO:0000003 ! occurrent -disjoint_from: UBERON:0001062 ! anatomical entity -relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae -relationship: present_in_taxon NCBITaxon:33208 ! Metazoa -relationship: present_in_taxon NCBITaxon:4751 ! Fungi property_value: seeAlso "https://github.com/OBOFoundry/COB/issues/51" xsd:anyURI +is_obsolete: true + +[Term] +id: UBERON:0000001 +name: gross anatomical part +def: "Anatomical structure that is part of a multicellular organism and is at the gross anatomical level, e.g. above the level of a cell. Included are portions of organism substances such as blood, multi-cell-part structures such as axon tracts, acellular anatomical structures such as hair, and organism subdivisions such as head. Excluded is the whole organism and more granular parts of the organism, such as atoms, molecules, macromolecular complexes and cells." [CARO:0001008] +subset: human_subset +subset: mouse_subset +xref: CARO:0001008 +is_a: UBERON:0000465 ! material anatomical entity +disjoint_from: UBERON:0000468 ! multicellular organism +relationship: present_in_taxon NCBITaxon:2759 ! Eukaryota [Term] id: UBERON:0000002 @@ -153753,7 +154703,7 @@ property_value: has_relational_adjective "tubular" xsd:string [Term] id: UBERON:0000026 name: appendage -def: "Major subdivision of an organism that protrudes from the body[DOS, CARO]." [CARO:DOS] +def: "Major subdivision of an organism that protrudes from the body[DOS, CARO]." [https://orcid.org/0000-0002-7073-9172] subset: efo_slim subset: human_subset subset: mouse_subset @@ -154850,8 +155800,6 @@ id: UBERON:0000066 name: fully formed stage def: "The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage." [https://orcid.org/0000-0002-6601-2165] subset: efo_slim -subset: human_subset -subset: mouse_subset synonym: "adult stage" BROAD [] synonym: "fully formed animal stage" EXACT [] synonym: "juvenile-adult stage" EXACT [] @@ -154899,8 +155847,6 @@ is_obsolete: true id: UBERON:0000068 name: embryo stage def: "A life cycle stage that starts with fertilization and ends with the fully formed embryo." [http://orcid.org/0000-0002-6601-2165] -subset: human_subset -subset: mouse_subset synonym: "embryogenesis" RELATED [] synonym: "embryonic stage" EXACT [] xref: AcarDv:0000002 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -155031,8 +155977,6 @@ id: UBERON:0000071 name: death stage def: "End of the life of an organism." [XAO:0000437] subset: common_anatomy -subset: human_subset -subset: mouse_subset synonym: "death" RELATED [] xref: XAO:0000437 xref: XtroDO:0000085 @@ -155666,8 +156610,6 @@ property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e3/Gr id: UBERON:0000092 name: post-embryonic stage def: "Stage succeeding embryo, including mature structure." [https://orcid.org/0000-0002-6601-2165] -subset: human_subset -subset: mouse_subset synonym: "post-hatching stage" NARROW [] synonym: "postembryonic" RELATED [] synonym: "postembryonic stage" EXACT [] @@ -155808,8 +156750,6 @@ id: UBERON:0000104 name: life cycle def: "An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism." [https://orcid.org/0000-0002-6601-2165] subset: common_anatomy -subset: human_subset -subset: mouse_subset subset: upper_level synonym: "entire life cycle" EXACT [] synonym: "entire lifespan" EXACT [] @@ -155841,7 +156781,7 @@ xref: PtroDv:0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab xref: RnorDv:0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: SsalDv:0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: SscrDv:0000001 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} -is_a: UBERON:0000000 ! processual entity +is_a: BFO:0000015 ! process relationship: ends_with UBERON:0000071 ! death stage relationship: has_part UBERON:0000105 ! life cycle stage relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae @@ -155856,8 +156796,6 @@ name: life cycle stage def: "A spatiotemporal region encompassing some part of the life cycle of an organism." [https://orcid.org/0000-0002-6601-2165] subset: common_anatomy subset: efo_slim -subset: human_subset -subset: mouse_subset subset: upper_level synonym: "developmental stage" NARROW [] synonym: "stage" NARROW [] @@ -155895,7 +156833,7 @@ xref: WBls:0000002 xref: XAO:1000000 xref: ZFS:0000000 xref: ZFS:0100000 -is_a: UBERON:0000000 ! processual entity +is_a: BFO:0000015 ! process relationship: part_of UBERON:0000104 ! life cycle relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -155909,8 +156847,6 @@ id: UBERON:0000106 name: zygote stage def: "A stage at which the organism is a single cell produced by means of sexual reproduction." [Wikipedia:Zygote] subset: efo_slim -subset: human_subset -subset: mouse_subset synonym: "1-cell stage" EXACT [] synonym: "fertilized egg stage" EXACT [BTO:0000854] synonym: "fertilized egg stage" RELATED [] @@ -155948,8 +156884,6 @@ id: UBERON:0000107 name: cleavage stage def: "The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula." [GO:0040016, Wikipedia:Cleavage_(embryo)] subset: efo_slim -subset: human_subset -subset: mouse_subset xref: BilaDO:0000006 xref: BILS:0000107 xref: ChirDv:0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -155981,8 +156915,6 @@ id: UBERON:0000108 name: blastula stage def: "An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence." [Wikipedia:Blastula] subset: efo_slim -subset: human_subset -subset: mouse_subset xref: BilaDO:0000007 xref: BILS:0000108 xref: ChirDv:0000010 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -156012,8 +156944,6 @@ id: UBERON:0000109 name: gastrula stage def: "A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm." [GO:0007369] subset: efo_slim -subset: human_subset -subset: mouse_subset synonym: "blastocystis trilaminaris stage" RELATED [https://orcid.org/0000-0002-6601-2165] synonym: "trilaminar blastocyst stage" RELATED [https://orcid.org/0000-0002-6601-2165] synonym: "trilaminar blastoderm stage" RELATED [https://orcid.org/0000-0002-6601-2165] @@ -156047,8 +156977,6 @@ relationship: simultaneous_with GO:0007369 ! gastrulation id: UBERON:0000110 name: neurula stage def: "A chordate developmental stage defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system." [GO:0001841] -subset: human_subset -subset: mouse_subset xref: BilaDO:0000009 xref: BILS:0000110 xref: ChirDv:0000012 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -156073,8 +157001,6 @@ property_value: taxon_notes "In zebrafish, the times of neurulation and segmenta id: UBERON:0000111 name: organogenesis stage def: "A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism." [Wikipedia:Organogenesis] -subset: human_subset -subset: mouse_subset synonym: "segmentation stage" RELATED [] xref: BilaDO:0000010 xref: BILS:0000111 @@ -156101,8 +157027,6 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/issues/533" xsd: id: UBERON:0000112 name: sexually immature stage subset: efo_slim -subset: human_subset -subset: mouse_subset synonym: "immature stage" EXACT [VHOG:FB] synonym: "juvenile stage" NARROW [XAO:1000010] synonym: "subadult stage" RELATED [http://eol.org/schema/terms/subadult] @@ -156146,8 +157070,6 @@ property_value: taxon_notes "In mammals this would include infant (nourishment f id: UBERON:0000113 name: post-juvenile adult stage def: "The stage of being a sexually mature adult animal." [https://orcid.org/0000-0002-6601-2165] -subset: human_subset -subset: mouse_subset synonym: "adult stage" BROAD [] xref: AcarDv:0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: BILS:0000113 @@ -156359,7 +157281,7 @@ property_value: has_relational_adjective "perineurial" xsd:string id: UBERON:0000122 name: neuron projection bundle alt_id: UBERON:0005163 -def: "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." [CARO:0001001, FBbt:00005099, FBC:DOS] +def: "A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses." [CARO:0001001, FBbt:00005099, https://orcid.org/0000-0002-7073-9172] subset: human_subset subset: mouse_subset synonym: "funiculus" EXACT [] @@ -156964,7 +157886,7 @@ xref: Wikipedia:Mouth xref: XAO:0003029 xref: ZFA:0000547 xref: ZFA:0000590 -is_a: UBERON:0004921 {notes="the mouth contains structures such as jaw skeleton that may not strictly be considered tract parts"} ! subdivision of digestive tract +is_a: UBERON:0004921 ! subdivision of digestive tract intersection_of: UBERON:0004921 ! subdivision of digestive tract intersection_of: proximalmost_part_of UBERON:0001555 ! digestive tract relationship: develops_from UBERON:0035804 ! future mouth @@ -157076,9 +157998,7 @@ intersection_of: UBERON:0034925 ! anatomical collection intersection_of: has_member UBERON:0002167 ! right lung intersection_of: has_member UBERON:0002168 ! left lung relationship: has_member UBERON:0002167 ! right lung -relationship: has_member UBERON:0002167 {cardinality="1"} ! right lung relationship: has_member UBERON:0002168 ! left lung -relationship: has_member UBERON:0002168 {cardinality="1"} ! left lung relationship: located_in UBERON:0002224 ! thoracic cavity relationship: part_of UBERON:0001558 {source="FMA-abduced"} ! lower respiratory tract relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -159111,7 +160031,7 @@ xref: UMLS:C1710437 {source="ncithesaurus:Tongue_Skeletal_Muscle_Tissue"} xref: VHOG:0001390 xref: Wikipedia:Muscles_of_tongue is_a: UBERON:0013765 ! digestive system element -is_a: UBERON:0014892 {source="FEED:rd"} ! skeletal muscle organ, vertebrate +is_a: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: attaches_to_part_of UBERON:0001723 ! tongue union_of: UBERON:0001575 ! extrinsic muscle of tongue @@ -160633,7 +161553,8 @@ xref: TGMA:0001824 xref: VHOG:0001726 xref: XAO:0004001 xref: ZFA:0001487 -is_a: UBERON:0000465 ! material anatomical entity +is_a: UBERON:0000001 ! gross anatomical part +disjoint_from: UBERON:0000468 ! multicellular organism relationship: has_quality PATO:0002198 ! quality of a substance relationship: part_of UBERON:0000468 {notes="this relationship may be too strong and may be weakened in future"} ! multicellular organism relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae @@ -160695,6 +161616,10 @@ xref: TGMA:0001826 xref: VHOG:0001721 is_a: BFO:0000040 ! material entity is_a: UBERON:0001062 ! anatomical entity +union_of: CL:0000000 ! cell +union_of: COB:0000021 ! gross anatomical part +union_of: COB:0000022 ! organism +union_of: GO:0110165 ! cellular anatomical entity disjoint_from: UBERON:0000466 ! immaterial anatomical entity relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -161013,7 +161938,7 @@ property_value: homology_notes "By far, sexual reproduction is the more common p [Term] id: UBERON:0000475 name: organism subdivision -def: "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument." [CARO:0000032, CARO:DOS, http://orcid.org/0000-0001-9114-8737] +def: "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument." [CARO:0000032, http://orcid.org/0000-0001-9114-8737, https://orcid.org/0000-0002-7073-9172] subset: common_anatomy subset: efo_slim subset: human_subset @@ -161085,7 +162010,7 @@ xref: TAO:0000382 xref: TGMA:0001841 xref: XAO:0003162 xref: ZFA:0000382 -is_a: UBERON:0000061 ! anatomical structure +is_a: UBERON:0000001 ! gross anatomical part disjoint_from: UBERON:0010000 {source="CARO"} ! multicellular anatomical structure relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -161109,7 +162034,7 @@ relationship: present_in_taxon NCBITaxon:4751 ! Fungi [Term] id: UBERON:0000478 name: extraembryonic structure -def: "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis." [CARO:DOS, http://orcid.org/0000-0001-9114-8737, https://cedar.bio.indiana.edu/trac/env/ontologies/ticket/279] +def: "A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis." [http://orcid.org/0000-0001-9114-8737, https://cedar.bio.indiana.edu/trac/env/ontologies/ticket/279, https://orcid.org/0000-0002-7073-9172] comment: see also conceptus extraembryonic component in EHDAA2. subset: human_subset subset: mouse_subset @@ -161588,11 +162513,11 @@ synonym: "suspensory muscle of duodenum" EXACT [FMA:20509] xref: FMA:20509 xref: SCTID:279979000 xref: Wikipedia:Suspensory_muscle_of_duodenum -is_a: UBERON:0008841 {source="Obol"} ! suspensory ligament +is_a: UBERON:0008841 ! suspensory ligament intersection_of: UBERON:0008841 ! suspensory ligament intersection_of: attaches_to UBERON:0002114 ! duodenum relationship: attaches_to UBERON:0001103 {source="Obol"} ! diaphragm -relationship: attaches_to UBERON:0002114 {source="Obol"} ! duodenum +relationship: attaches_to UBERON:0002114 ! duodenum relationship: part_of RO:0002577 ! system property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/ed/Gray1042.png" xsd:anyURI @@ -163110,7 +164035,6 @@ xref: VHOG:0000190 xref: Wikipedia:Optic_chiasm xref: XAO:0004071 xref: ZFA:0000556 -is_a: UBERON:0007418 {source="cjm"} ! neural decussation is_a: UBERON:0007425 ! decussation of diencephalon intersection_of: UBERON:0007418 ! neural decussation intersection_of: extends_fibers_into UBERON:0000941 ! cranial nerve II @@ -163667,7 +164591,7 @@ relationship: has_part UBERON:0002401 ! visceral pleura relationship: has_quality PATO:0001748 ! invaginated relationship: in_taxon NCBITaxon:32524 ! Amniota relationship: part_of UBERON:0001004 ! respiratory system -relationship: part_of UBERON:0009778 {source="https://github.com/obophenotype/uberon/issues/86"} ! pleural sac +relationship: part_of UBERON:0009778 ! pleural sac relationship: present_in_taxon NCBITaxon:8782 {source="ISBN:978-0030223693", source="https://orcid.org/0000-0003-3308-6245"} ! Aves property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/a/ab/Gray965.png" xsd:anyURI property_value: external_definition "The serous membrane that covers the lungs and lines the pleural cavity. [Kaufman_MH_and_Bard_JBL, The_anatomical_basis_of_mouse_development_(1999)_San_Diego:_Academic_Press, p.264][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000394", ontology="VHOG", source="ISBN:0124020607", source="http://bgee.unil.ch/"} @@ -166369,6 +167293,8 @@ xref: WBbt:0000100 xref: XAO:0000000 xref: ZFA:0100000 is_a: BFO:0000004 ! independent continuant +union_of: UBERON:0000465 ! material anatomical entity +union_of: UBERON:0000466 ! immaterial anatomical entity relationship: part_of UBERON:0003942 {gci_filler="GO:0050975", gci_relation="capable_of_part_of"} ! somatosensory system relationship: part_of UBERON:0003942 {gci_relation="capable_of_part_of", gci_filler="GO:0019233"} ! somatosensory system relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae @@ -167908,8 +168834,8 @@ intersection_of: has_muscle_insertion UBERON:0002228 ! rib intersection_of: has_muscle_origin UBERON:0002228 ! rib intersection_of: located_in UBERON:0012198 ! intercostal space relationship: develops_from UBERON:0010970 {source="EHDAA2"} ! intercostal pre-muscle mass -relationship: has_muscle_insertion UBERON:0002228 {notes="ribs 2-12", source="dbpedia"} ! rib -relationship: has_muscle_origin UBERON:0002228 {notes="ribs 1-11", source="dbpedia"} ! rib +relationship: has_muscle_insertion UBERON:0002228 ! rib +relationship: has_muscle_origin UBERON:0002228 ! rib relationship: innervated_by UBERON:0003727 {source="dbpedia"} ! intercostal nerve relationship: located_in UBERON:0012198 ! intercostal space relationship: part_of RO:0002577 ! system @@ -171062,7 +171988,7 @@ xref: UMLS:C0006323 {source="ncithesaurus:Brunner_s_Gland"} xref: Wikipedia:Brunner's_glands is_a: UBERON:0000414 {source="MP"} ! mucous gland is_a: UBERON:0003408 ! gland of digestive tract -is_a: UBERON:0011148 {notes="compound tubular"} ! submucosal gland +is_a: UBERON:0011148 ! submucosal gland intersection_of: UBERON:0011148 ! submucosal gland intersection_of: part_of UBERON:0002114 ! duodenum relationship: in_taxon NCBITaxon:40674 {notes="unclear for Aves", source="ISBN:9780521617147"} ! Mammalia @@ -175284,7 +176210,7 @@ intersection_of: part_of UBERON:0001270 ! bony pelvis relationship: anteriorly_connected_to UBERON:0003690 {gci_relation="part_of", gci_filler="NCBITaxon:9606", source="FMA"} ! fused sacrum relationship: develops_from UBERON:0007144 ! embryonic post-anal tail relationship: has_fused_element UBERON:0001095 ! caudal vertebra -relationship: part_of UBERON:0001270 {source="FMA"} ! bony pelvis +relationship: part_of UBERON:0001270 ! bony pelvis relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/91/Gray100.png" xsd:anyURI property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb" xsd:anyURI @@ -178891,8 +179817,8 @@ is_a: UBERON:0011965 {gci_relation="part_of", gci_filler="NCBITaxon:9606", sourc intersection_of: UBERON:0000982 ! skeletal joint intersection_of: connects UBERON:0000975 ! sternum intersection_of: connects UBERON:0001105 ! clavicle bone -relationship: connects UBERON:0000975 {notes="clavicular notch of the manubrium sterni"} ! sternum -relationship: connects UBERON:0001105 {notes="sternal end of the clavicle and first rib"} ! clavicle bone +relationship: connects UBERON:0000975 ! sternum +relationship: connects UBERON:0001105 ! clavicle bone property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/3/3f/Gray325.png" xsd:anyURI [Term] @@ -179063,7 +179989,7 @@ intersection_of: composed_primarily_of UBERON:0002481 ! bone tissue disjoint_from: UBERON:0001630 ! muscle organ disjoint_from: UBERON:0005090 ! muscle structure disjoint_from: UBERON:0010538 ! paired limb/fin segment -relationship: composed_primarily_of UBERON:0002481 {source="VSAO-modified"} ! bone tissue +relationship: composed_primarily_of UBERON:0002481 ! bone tissue relationship: in_taxon NCBITaxon:7742 ! Vertebrata relationship: mutually_spatially_disjoint_with UBERON:0001015 ! musculature relationship: mutually_spatially_disjoint_with UBERON:0001630 ! muscle organ @@ -180227,7 +181153,7 @@ xref: NCIT:C33766 xref: SCTID:302510009 xref: UMLS:C1522460 {source="ncithesaurus:Thoracic_Aorta"} xref: Wikipedia:Thoracic_aorta -is_a: UBERON:0005800 {source="FMA"} ! section of aorta +is_a: UBERON:0005800 ! section of aorta intersection_of: UBERON:0005800 ! section of aorta intersection_of: part_of UBERON:0000915 ! thoracic segment of trunk relationship: contributes_to_morphology_of UBERON:0000947 ! aorta @@ -181569,7 +182495,7 @@ relationship: attaches_to UBERON:0001738 ! thyroid cartilage relationship: attaches_to UBERON:0002375 ! cricoid cartilage relationship: has_muscle_insertion UBERON:0001738 {notes="Inferior cornu and lamina of the thyroid cartilage", source="dbpedia"} ! thyroid cartilage relationship: has_muscle_origin UBERON:0002375 {notes="Anterior and lateral cricoid cartilage", source="dbpedia"} ! cricoid cartilage -relationship: innervated_by UBERON:0001759 {notes="external laryngeal branch of the vagus", source="dbpedia"} ! vagus nerve +relationship: innervated_by UBERON:0001759 ! vagus nerve relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/f/f4/Musculuscricothyreoideus.png" xsd:anyURI @@ -181841,7 +182767,7 @@ relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 relationship: develops_from UBERON:0011332 ! extrinsic tongue pre-muscle mass relationship: immediate_transformation_of UBERON:0011332 ! extrinsic tongue pre-muscle mass -relationship: innervated_by UBERON:0001650 {notes="check palatoglossus", source="Wikipedia"} ! hypoglossal nerve +relationship: innervated_by UBERON:0001650 ! hypoglossal nerve relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: function_notes "main functions are altering the tongue's position allowing for protrusion, retraction, and side-to-side movement" xsd:string {source="WP"} property_value: homology_notes "The lamprey head contains another group of muscles, the epi- and hypo-branchial muscles (EBM and HBM), derivatives of anterior trunk myotomes. (...) The origin and the migration pattern of HBM precursors are very similar to that of the gnathostome MPP, especially to that of the tongue muscle precursors. Other evidence of homology of lamprey HBM to the gnathostome tongue muscle is that HBM is innervated by the nerve termed the hypoglossal nerve based on its morphological position associated with the head/trunk interface. (...) The HBM-specific expression of the LampPax3/7 gene is consistent with the homology of this muscle to the gnathostome tongue muscle, or to the hypobranchial series as a whole (including the infrahyoid and possibly the diaphragm in mammals).[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000825", ontology="VHOG", source="DOI:10.1002/dvdy.20587 Kusakabe R, Kuratani S, Evolution and developmental patterning of the vertebrate skeletal muscles: perspectives from the lamprey. Developmental Dynamics (2005)", source="http://bgee.unil.ch/"} @@ -181871,7 +182797,7 @@ intersection_of: innervated_by UBERON:0001650 ! hypoglossal nerve intersection_of: part_of UBERON:0001723 ! tongue relationship: attaches_to_part_of UBERON:0001723 ! tongue relationship: develops_from UBERON:0010059 {source="EHDAA2"} ! hypoglossal cord -relationship: innervated_by UBERON:0001650 {source="FEED", source="Wikipedia"} ! hypoglossal nerve +relationship: innervated_by UBERON:0001650 ! hypoglossal nerve relationship: part_of UBERON:0001723 ! tongue relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: external_definition "The intrinsic tongue muscles are an integral part of the tongue that are innervated by Cranial Nerve XII.[FEED]" xsd:string {date_retrieved="2012-07-02", ontology="FEED", url="http://www.feedexp.org"} @@ -182006,7 +182932,7 @@ intersection_of: extends_fibers_into UBERON:0002264 ! olfactory bulb intersection_of: innervates UBERON:0001997 ! olfactory epithelium relationship: develops_from UBERON:0003050 {source="ISBN:0471888893"} ! olfactory placode relationship: extends_fibers_into UBERON:0002264 ! olfactory bulb -relationship: innervates UBERON:0001997 {source="ISBN:0471888893"} ! olfactory epithelium +relationship: innervates UBERON:0001997 ! olfactory epithelium relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/b/be/Gray771.png" xsd:anyURI property_value: external_definition "Nerve that carries information from the olfactory epithelium through the olfactory bulb to the olfactory cortex of the telencephalon.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010088", ontology="AAO", source="AAO:DSM"} @@ -183497,7 +184423,7 @@ intersection_of: UBERON:0006347 ! communicating artery intersection_of: connecting_branch_of UBERON:0001532 ! internal carotid artery intersection_of: part_of UBERON:0003709 ! circle of Willis disjoint_from: UBERON:0006764 {source="lexical"} ! anterior communicating artery -relationship: connecting_branch_of UBERON:0001532 {source="FMA", source="ZFA"} ! internal carotid artery +relationship: connecting_branch_of UBERON:0001532 ! internal carotid artery relationship: in_lateral_side_of UBERON:0003709 {source="FMA-abduced-lr"} ! circle of Willis relationship: part_of RO:0002577 ! system relationship: part_of UBERON:0003709 ! circle of Willis @@ -184158,7 +185084,6 @@ intersection_of: extends_fibers_into UBERON:0002925 ! trigeminal nucleus intersection_of: innervates UBERON:0000165 ! mouth intersection_of: innervates UBERON:0011648 ! jaw muscle intersection_of: innervates UBERON:1000021 ! skin of face -relationship: capable_of_part_of GO:0050964 {gci_relation="part_of", gci_filler="NCBITaxon:9255", source="PMID:22179203"} ! detection of electrical stimulus involved in electroception relationship: extends_fibers_into UBERON:0002925 ! trigeminal nucleus relationship: has_developmental_contribution_from UBERON:0003099 ! cranial neural crest relationship: has_developmental_contribution_from UBERON:0005239 {source="Wikipedia"} ! basal plate metencephalon @@ -187053,7 +187978,7 @@ xref: EMAPA:35264 xref: FMA:54816 xref: MA:0001502 xref: SCTID:314228003 -is_a: UBERON:0002215 {source="FMA"} ! synchondrosis +is_a: UBERON:0002215 ! synchondrosis intersection_of: UBERON:0002215 ! synchondrosis intersection_of: part_of UBERON:0003129 ! skull relationship: part_of UBERON:0003129 ! skull @@ -187514,7 +188439,6 @@ xref: SCTID:263482005 xref: UMLS:C0023050 {source="ncithesaurus:Laryngeal_Cartilage"} xref: VHOG:0001550 is_a: UBERON:0003406 ! cartilage of respiratory system -is_a: UBERON:0007844 {source="FMA"} ! cartilage element is_a: UBERON:0011004 ! pharyngeal arch cartilage intersection_of: UBERON:0007844 ! cartilage element intersection_of: part_of UBERON:0001737 ! larynx @@ -188779,7 +189703,7 @@ is_a: UBERON:0015808 ! eye epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001775 ! ciliary body relationship: has_part GO:0048770 {source="MP"} ! pigment granule -relationship: part_of UBERON:0001775 {source="MA"} ! ciliary body +relationship: part_of UBERON:0001775 ! ciliary body relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: produces UBERON:0001796 {source="Wikipedia"} ! aqueous humor of eyeball @@ -189711,7 +190635,6 @@ xref: UMLS:C0229232 {source="ncithesaurus:Lens_Capsule"} xref: VHOG:0000550 xref: Wikipedia:Lens_(anatomy)#Lens_capsule xref: ZFA:0005574 -is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0005764 ! acellular membrane intersection_of: UBERON:0000476 ! acellular anatomical structure intersection_of: bounding_layer_of UBERON:0000965 ! lens of camera-type eye @@ -189875,7 +190798,7 @@ xref: MA:0001144 xref: NCIT:C52709 xref: UMLS:C0501399 {source="ncithesaurus:Enteric_Ganglion"} xref: Wikipedia:Enteric_ganglia -is_a: UBERON:0001808 {source="FMA"} ! parasympathetic ganglion +is_a: UBERON:0001808 ! parasympathetic ganglion intersection_of: UBERON:0001808 ! parasympathetic ganglion intersection_of: part_of UBERON:0002005 ! enteric nervous system relationship: contributes_to_morphology_of UBERON:0002005 ! enteric nervous system @@ -200703,7 +201626,6 @@ xref: FMA:72024 xref: MA:0000708 xref: NCIT:C49195 xref: UMLS:C1706851 {source="ncithesaurus:Artery_Smooth_Muscle_Tissue"} -is_a: UBERON:0001135 {source="FMA"} ! smooth muscle tissue is_a: UBERON:0004237 ! blood vessel smooth muscle is_a: UBERON:0004695 ! arterial system smooth muscle intersection_of: UBERON:0001135 ! smooth muscle tissue @@ -202302,7 +203224,7 @@ relationship: mutually_spatially_disjoint_with UBERON:0002870 {source="ABA"} ! d relationship: mutually_spatially_disjoint_with UBERON:0002871 {source="ABA"} ! hypoglossal nucleus relationship: mutually_spatially_disjoint_with UBERON:0002872 {source="ABA"} ! inferior salivatory nucleus relationship: mutually_spatially_disjoint_with UBERON:0002877 {source="ABA"} ! parasolitary nucleus -relationship: part_of UBERON:0009775 {source="FMA"} ! lateral medullary reticular complex +relationship: part_of UBERON:0009775 ! lateral medullary reticular complex property_value: external_ontology_notes "in ABA this is disjoint from MDR, but we relax this here to accomodate FMA" xsd:string {external_ontology="ABA"} [Term] @@ -202801,7 +203723,7 @@ intersection_of: part_of UBERON:0008874 ! pulmonary acinus relationship: contributes_to_morphology_of UBERON:0008874 ! pulmonary acinus relationship: has_part UBERON:0002299 ! alveolus of lung relationship: part_of UBERON:0006524 {source="MA"} ! alveolar system -relationship: part_of UBERON:0008874 {source="FMA"} ! pulmonary acinus +relationship: part_of UBERON:0008874 ! pulmonary acinus [Term] id: UBERON:0002170 @@ -202830,7 +203752,7 @@ xref: SCTID:361969002 xref: UMLS:C1261074 {source="ncithesaurus:Upper_Lobe_of_the_Right_Lung"} xref: VHOG:0000859 is_a: UBERON:0006518 ! right lung lobe -is_a: UBERON:0008948 {source="FMA"} ! upper lobe of lung +is_a: UBERON:0008948 ! upper lobe of lung intersection_of: UBERON:0008948 ! upper lobe of lung intersection_of: part_of UBERON:0002167 ! right lung relationship: contributes_to_morphology_of UBERON:0002167 ! right lung @@ -202865,7 +203787,7 @@ xref: SCTID:361976007 xref: UMLS:C1261075 {source="ncithesaurus:Lower_Lobe_of_the_Right_Lung"} xref: VHOG:0000857 is_a: UBERON:0006518 ! right lung lobe -is_a: UBERON:0008949 {source="FMA"} ! lower lobe of lung +is_a: UBERON:0008949 ! lower lobe of lung intersection_of: UBERON:0008949 ! lower lobe of lung intersection_of: part_of UBERON:0002167 ! right lung relationship: contributes_to_morphology_of UBERON:0002167 ! right lung @@ -204163,7 +205085,7 @@ relationship: part_of RO:0002577 ! system relationship: part_of UBERON:0001016 {comment="EDITOR_NOTE we do not commit to CNS or PNS to allow for flexibility with this class"} ! nervous system relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: editor_note "We consider cranial nerve roots to be primarily CNS structures, but model spinal nerve roots as PNS structures, due to the existence of ganglia on the roots." xsd:string -property_value: external_definition "The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, FBC:DOS]." xsd:string {source="FBbt:00007602, FBC:DOS"} +property_value: external_definition "The continuation of the neurite bundle and associated glia of a nerve, inside the central nervous system[FBbt:00007602, https://orcid.org/0000-0002-7073-9172]." xsd:string {source="FBbt:00007602, https://orcid.org/0000-0002-7073-9172"} property_value: external_ontology_notes "FMA has 'central zone of nerve' which is the superclass of cranial nerve tracts, which the FMA sometimes calls roots" xsd:string {external_ontology="FMA"} [Term] @@ -204221,7 +205143,7 @@ xref: SCTID:58442004 xref: TAO:0005155 xref: Wikipedia:Cartilaginous_joint xref: ZFA:0005155 -is_a: UBERON:0011134 {source="FMA"} ! nonsynovial joint +is_a: UBERON:0011134 ! nonsynovial joint intersection_of: UBERON:0011134 ! nonsynovial joint intersection_of: composed_primarily_of UBERON:0002418 ! cartilage tissue relationship: composed_primarily_of UBERON:0002418 ! cartilage tissue @@ -204784,6 +205706,7 @@ xref: SCTID:368960006 xref: UMLS:C0039432 {source="ncithesaurus:Tectorial_Membrane"} xref: UMLS:C1184928 {source="BIRNLEX:2531"} xref: Wikipedia:Tectorial_membrane_(cochlea) +is_a: UBERON:0000061 ! anatomical structure is_a: UBERON:0005764 {source="Wikipedia"} ! acellular membrane relationship: attaches_to UBERON:0002276 {notes="limbal zone"} ! lamina of spiral limbus relationship: part_of RO:0002577 ! system @@ -204842,7 +205765,7 @@ is_a: UBERON:4100000 ! skeletal element projection intersection_of: UBERON:0005813 ! tubercle intersection_of: part_of UBERON:0002231 ! body of rib disjoint_from: UBERON:0011652 ! dorsal head of rib -relationship: part_of UBERON:0002231 {source="FMA"} ! body of rib +relationship: part_of UBERON:0002231 ! body of rib relationship: part_of UBERON:0010388 {source="PMID:15906248"} ! proximal segment of rib [Term] @@ -210063,7 +210986,7 @@ relationship: channel_for UBERON:0001970 ! bile relationship: contributes_to_morphology_of UBERON:0001173 ! biliary tree relationship: develops_from UBERON:0008835 {source="XAO"} ! hepatic diverticulum relationship: has_part CL:0000168 {gci_relation="part_of", gci_filler="NCBITaxon:7769", source="PMID:16417468"} ! insulin secreting cell -relationship: part_of UBERON:0001173 {source="EMAPA", source="MA"} ! biliary tree +relationship: part_of UBERON:0001173 ! biliary tree relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/5/5d/Digestive_system_showing_bile_duct.png" xsd:anyURI property_value: external_definition "A duct that carries bile from the liver to the intestine." xsd:string {source="ZFA:0001100, ZFA:curator"} @@ -213629,7 +214552,7 @@ intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001769 ! iris relationship: contributes_to_morphology_of UBERON:0001769 ! iris relationship: has_part GO:0048770 {source="MP"} ! pigment granule -relationship: part_of UBERON:0001769 {source="MA"} ! iris +relationship: part_of UBERON:0001769 ! iris relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -221228,7 +222151,7 @@ xref: DMBA:17741 xref: FMA:72491 xref: neuronames:598 {source="BIRNLEX:1689"} xref: UMLS:C0175450 {source="BIRNLEX:1689"} -is_a: UBERON:0006843 {source="FMA"} ! root of cranial nerve +is_a: UBERON:0006843 ! root of cranial nerve intersection_of: UBERON:0006843 ! root of cranial nerve intersection_of: extends_fibers_into UBERON:0001646 ! abducens nerve relationship: extends_fibers_into UBERON:0001646 ! abducens nerve @@ -222934,7 +223857,7 @@ is_a: UBERON:0019263 ! gray matter of hindbrain is_a: UBERON:0035011 ! central gray substance intersection_of: UBERON:0035011 ! central gray substance intersection_of: part_of UBERON:0001896 ! medulla oblongata -relationship: part_of UBERON:0001896 {source="FMA"} ! medulla oblongata +relationship: part_of UBERON:0001896 ! medulla oblongata [Term] id: UBERON:0002868 @@ -223961,7 +224884,7 @@ xref: Wikipedia:Occipital_pole is_a: UBERON:0009899 ! pole of cerebral hemisphere intersection_of: UBERON:0009899 ! pole of cerebral hemisphere intersection_of: part_of UBERON:0002021 ! occipital lobe -relationship: part_of UBERON:0002021 {source="BTO"} ! occipital lobe +relationship: part_of UBERON:0002021 ! occipital lobe relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/e3/Human_brain_lateral_view_description.JPG" xsd:anyURI property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.4/assets/3d-allen-f-brain.glb" xsd:anyURI @@ -224508,7 +225431,6 @@ xref: SCTID:280164007 xref: UMLS:C0040999 {source="ncithesaurus:Trigeminal_Nucleus"} xref: VHOG:0001353 is_a: UBERON:0000126 ! cranial nerve nucleus -is_a: UBERON:0002308 {source="FMA"} ! nucleus of brain intersection_of: UBERON:0002308 ! nucleus of brain intersection_of: part_of UBERON:0007641 ! trigeminal nuclear complex relationship: extends_fibers_into UBERON:0001645 ! trigeminal nerve @@ -227199,7 +228121,7 @@ xref: ZFA:0000325 is_a: UBERON:0015233 ! nucleus of dorsal thalamus intersection_of: UBERON:0002308 ! nucleus of brain intersection_of: part_of UBERON:0002709 ! posterior nuclear complex of thalamus -relationship: part_of UBERON:0002709 {source="FMA", source="NIFSTD"} ! posterior nuclear complex of thalamus +relationship: part_of UBERON:0002709 ! posterior nuclear complex of thalamus [Term] id: UBERON:0003031 @@ -227771,7 +228693,7 @@ xref: VHOG:0000649 xref: XAO:0000016 xref: ZFA:0000042 is_a: UBERON:0004121 ! ectoderm-derived structure -is_a: UBERON:0007651 {inconsistent_with="ZFA", source="https://sourceforge.net/p/obo/zebrafish-anatomy-zfa-term-requests/106/"} ! anatomical junction +is_a: UBERON:0007651 ! anatomical junction intersection_of: UBERON:0007651 ! anatomical junction intersection_of: overlaps UBERON:0001891 ! midbrain intersection_of: overlaps UBERON:0002028 ! hindbrain @@ -227973,7 +228895,7 @@ intersection_of: immediate_transformation_of UBERON:0007282 ! presumptive segmen relationship: develops_from UBERON:0000922 ! embryo relationship: develops_from UBERON:0007282 ! presumptive segmental plate relationship: has_potential_to_develop_into UBERON:0002329 ! somite -relationship: immediate_transformation_of UBERON:0007282 {source="Bgee:AN"} ! presumptive segmental plate +relationship: immediate_transformation_of UBERON:0007282 ! presumptive segmental plate relationship: part_of UBERON:0003077 ! paraxial mesoderm property_value: external_definition "Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. Kimmel et al, 1995.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000279", ontology="TAO", source="ZFIN:curator"} property_value: homology_notes "It is reasonable to assume that the proximate invertebrate ancestor of the vertebrates had an amphioxus-like tail bud in its larval stage. This archetypal tail bud would have (...) (3) lacked any component of mesenchyme cells, (4) budded off new mesodermal segments directly, without any intervening zone of presomitic mesoderm (...). Then, early in vertebrate evolution, epithelium-to-mesenchyme interconversions (and the gene networks for effecting them) became prominent features of development. (...) In any case, conspicuous mesenchymal components tended to be added to the vertebrate tail bud itself. In addition, a mesenchymatous presomitic mesoderm (not a part of the tail bud proper) came to intervene between the tail bud and the forming somites.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000559", ontology="VHOG", source="DOI:10.1006/dbio.2001.0460 Schubert M, Holland LZ, Dale Stokes M and Holland ND, Three Amphoxius Wnt Genes (AmphiWnt3, AmphiWnt5, and AmphiWnt6) Associated with the Tail Bud: the Evolution of Somitogenesis in Chordates. Developmental Biology (2001)", source="http://bgee.unil.ch/"} @@ -231135,8 +232057,8 @@ is_a: UBERON:0000478 ! extraembryonic structure intersection_of: UBERON:0000478 ! extraembryonic structure intersection_of: develops_from UBERON:0000371 ! syncytiotrophoblast intersection_of: part_of UBERON:0003124 ! chorion membrane -relationship: develops_from UBERON:0000371 {notes="polar trophectoderm syncytiotrophoblast", source="EHDAA2"} ! syncytiotrophoblast -relationship: part_of UBERON:0003124 {source="EHDAA2"} ! chorion membrane +relationship: develops_from UBERON:0000371 ! syncytiotrophoblast +relationship: part_of UBERON:0003124 ! chorion membrane property_value: editor_note "TODO - check" xsd:string [Term] @@ -232143,7 +233065,7 @@ is_a: UBERON:0004854 {source="MA"} ! gastrointestinal system mesentery intersection_of: UBERON:0002095 ! mesentery intersection_of: part_of UBERON:0000945 ! stomach relationship: contributes_to_morphology_of UBERON:0000945 ! stomach -relationship: part_of UBERON:0000945 {source="MA"} ! stomach +relationship: part_of UBERON:0000945 ! stomach property_value: editor_note "TODO - check primitive vs developed" xsd:string property_value: external_definition "The portion of the primitive mesentery that encloses the stomach; from its dorsal sheet, the greater omentum develops, and from its ventral sheet, the lesser omentum. [TFD][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000358", ontology="VHOG", source="http://bgee.unil.ch/", source="http://medical-dictionary.thefreedictionary.com/mesogastrium"} @@ -232411,7 +233333,7 @@ is_a: UBERON:0003408 ! gland of digestive tract is_a: UBERON:0036225 ! respiratory system gland intersection_of: UBERON:0002530 ! gland intersection_of: part_of UBERON:0001042 ! chordate pharynx -relationship: part_of UBERON:0001042 {source="BTO"} ! chordate pharynx +relationship: part_of UBERON:0001042 ! chordate pharynx [Term] id: UBERON:0003296 @@ -233543,7 +234465,7 @@ is_a: UBERON:0005911 ! endo-epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001042 ! chordate pharynx relationship: develops_from UBERON:0007690 {source="ZFA"} ! early pharyngeal endoderm -relationship: part_of UBERON:0001042 {source="ZFA"} ! chordate pharynx +relationship: part_of UBERON:0001042 ! chordate pharynx property_value: external_definition "Epithelium lining the pharynx consisting largely of simple columnar epithelium with a short segment (1mm) of stratified squamous epithelium on the ventral side. Chen et al, 2007.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001174", ontology="TAO", source="ZFIN:curator"} [Term] @@ -233562,7 +234484,7 @@ xref: MA:0003205 is_a: UBERON:0003929 ! digestive tract epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001045 ! midgut -relationship: part_of UBERON:0001045 {source="BTO"} ! midgut +relationship: part_of UBERON:0001045 ! midgut [Term] id: UBERON:0003353 @@ -233972,7 +234894,7 @@ is_a: UBERON:0000478 ! extraembryonic structure intersection_of: UBERON:0000478 ! extraembryonic structure intersection_of: develops_from UBERON:0000924 ! ectoderm intersection_of: part_of UBERON:0003124 ! chorion membrane -relationship: develops_from UBERON:0000924 {source="ISBN:0073040584"} ! ectoderm +relationship: develops_from UBERON:0000924 ! ectoderm relationship: part_of UBERON:0003124 ! chorion membrane [Term] @@ -234682,7 +235604,7 @@ is_a: UBERON:0009891 ! facial mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0002255 ! vomeronasal organ relationship: develops_from UBERON:0009204 {source="EHDAA2"} ! medial nasal process mesenchyme -relationship: part_of UBERON:0002255 {source="EHDAA2"} ! vomeronasal organ +relationship: part_of UBERON:0002255 ! vomeronasal organ [Term] id: UBERON:0003422 @@ -235506,7 +236428,7 @@ xref: UMLS:C0015455 {source="ncithesaurus:Facial_Bone"} is_a: UBERON:0003457 ! head bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0011156 ! facial skeleton -relationship: part_of UBERON:0011156 {source="MA"} ! facial skeleton +relationship: part_of UBERON:0011156 ! facial skeleton property_value: editor_note "test whether 'facial bone' is an exact synonym" xsd:string [Term] @@ -237122,7 +238044,7 @@ xref: MA:0001668 is_a: UBERON:0002335 ! macula densa intersection_of: UBERON:0002335 ! macula densa intersection_of: part_of UBERON:0001292 ! distal convoluted tubule -relationship: part_of UBERON:0001292 {source="MA"} ! distal convoluted tubule +relationship: part_of UBERON:0001292 ! distal convoluted tubule relationship: part_of UBERON:0002335 {source="MA"} ! macula densa [Term] @@ -240802,7 +241724,7 @@ intersection_of: has_fused_element UBERON:0001094 ! sacral vertebra intersection_of: part_of UBERON:0001270 ! bony pelvis relationship: anteriorly_connected_to UBERON:0004621 {gci_relation="part_of", gci_filler="NCBITaxon:9606", source="FMA"} ! lumbar vertebra 5 relationship: has_fused_element UBERON:0001094 ! sacral vertebra -relationship: part_of UBERON:0001270 {source="FMA"} ! bony pelvis +relationship: part_of UBERON:0001270 ! bony pelvis relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/e/ec/Gray95.png" xsd:anyURI property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/pelvis-female/v1.3/assets/3d-vh-f-pelvis.glb" xsd:anyURI @@ -241215,11 +242137,11 @@ xref: SCTID:362193005 xref: TAO:0005169 xref: UMLS:C0005401 {source="ncithesaurus:Intrahepatic_Bile_Duct"} xref: ZFA:0005169 -is_a: UBERON:0002394 {source="FMA"} ! bile duct +is_a: UBERON:0002394 ! bile duct intersection_of: UBERON:0002394 ! bile duct intersection_of: part_of UBERON:0002107 ! liver relationship: contributes_to_morphology_of UBERON:0002107 ! liver -relationship: part_of UBERON:0002107 {source="MA"} ! liver +relationship: part_of UBERON:0002107 ! liver property_value: editor_note "includes the hepatic duct of the caudate lobe, and the intra- and inter- lobar bile ducts" xsd:string property_value: external_definition "Duct that collects bile from the bile ductules and connects to the extrahepatic bile duct.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005169", ontology="TAO", source="ZFIN:curator"} @@ -242662,7 +243584,7 @@ xref: ZFA:0007021 is_a: UBERON:0003075 ! neural plate intersection_of: UBERON:0003075 ! neural plate intersection_of: develops_from UBERON:0006241 ! future spinal cord -relationship: develops_from UBERON:0006241 {source="ZFA"} ! future spinal cord +relationship: develops_from UBERON:0006241 ! future spinal cord property_value: external_definition "Neural plate that is part of the spinal cord. [Bgee_curator][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000439", ontology="VHOG", source="http://bgee.unil.ch/"} property_value: homology_notes "(...) at some stage of its development, every chordate exhibits five uniquely derived characters or synapomorphies of the group: (...) (4) a single, tubular nerve cord that is located dorsal to the notochord (...)[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000439", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.28", source="http://bgee.unil.ch/"} @@ -243286,7 +244208,7 @@ is_a: UBERON:0002095 ! mesentery intersection_of: UBERON:0002095 ! mesentery intersection_of: part_of UBERON:0000995 ! uterus relationship: part_of UBERON:0000459 {source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! uterine wall -relationship: part_of UBERON:0000995 {source="MA"} ! uterus +relationship: part_of UBERON:0000995 ! uterus relationship: part_of UBERON:0012332 ! broad ligament of uterus relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens @@ -243503,7 +244425,7 @@ xref: UMLS:C1514451 {source="ncithesaurus:Primordium_of_the_Liver"} xref: XAO:0003266 xref: ZFA:0000124 is_a: UBERON:0000485 {source="EHDAA2"} ! simple columnar epithelium -is_a: UBERON:0001048 {source="XAO"} ! primordium +is_a: UBERON:0001048 ! primordium is_a: UBERON:0005291 ! embryonic tissue is_a: UBERON:0006598 ! presumptive structure is_a: UBERON:0009497 ! epithelium of foregut-midgut junction @@ -243657,7 +244579,7 @@ relationship: develops_from UBERON:0005425 ! presumptive neural retina relationship: develops_from UBERON:0010312 ! immature eye relationship: has_part CL:0000210 ! photoreceptor cell relationship: has_part CL:0000540 ! neuron -relationship: immediate_transformation_of UBERON:0005425 {source="Bgee:AN"} ! presumptive neural retina +relationship: immediate_transformation_of UBERON:0005425 ! presumptive neural retina relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: homology_notes "(...) an essentially similar sequence of events occurs during the embryonic development of the vertebrate eye. The eye initially develops as a single median evagination of the diencephalon that soon bifurcates to form the paired optic vesicles. As each optic vesicle grows towards the body surface, its proximal part narrows as the optic stalk, and its distal part invaginates to form a two-layered optic cup. (...) The outer layer of the optic cup becomes the pigment layer of the retina, whereas the inner layer differentiates into the photoreceptive cells and neuronal layers of the retina.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000535", ontology="VHOG", source="ISBN:978-0030223693 Liem KF, Bemis WE, Walker WF, Grande L, Functional Anatomy of the Vertebrates: An Evolutionary Perspective (2001) p.429", source="http://bgee.unil.ch/"} @@ -250765,7 +251687,7 @@ is_a: UBERON:0001630 ! muscle organ intersection_of: UBERON:0001630 ! muscle organ intersection_of: part_of UBERON:0000019 ! camera-type eye relationship: contributes_to_morphology_of UBERON:0000019 ! camera-type eye -relationship: part_of UBERON:0000019 {source="MA"} ! camera-type eye +relationship: part_of UBERON:0000019 ! camera-type eye [Term] id: UBERON:0004288 @@ -252645,6 +253567,7 @@ xref: TAO:0002155 xref: UMLS:C0229127 {source="ncithesaurus:Bowman_s_Membrane"} xref: Wikipedia:Bowman%27s_membrane xref: ZFA:0001684 +is_a: UBERON:0000061 ! anatomical structure is_a: UBERON:0005769 ! basement membrane of epithelium intersection_of: UBERON:0005769 ! basement membrane of epithelium intersection_of: attaches_to UBERON:0001772 ! corneal epithelium @@ -254724,7 +255647,7 @@ xref: MA:0002441 is_a: UBERON:0001133 ! cardiac muscle tissue intersection_of: UBERON:0001133 ! cardiac muscle tissue intersection_of: part_of UBERON:0002349 ! myocardium -relationship: part_of UBERON:0002349 {source="MA"} ! myocardium +relationship: part_of UBERON:0002349 ! myocardium property_value: editor_note "Note placement of MA class based on parthood relationship" xsd:string [Term] @@ -258296,8 +259219,6 @@ id: UBERON:0004707 name: pharyngula stage def: "A chordate developmental stage that follows the blastula, gastrula and neurula stages. At the pharyngula stage, all vertebrate embryos show remarkable similarities." [Wikipedia:Pharyngula] subset: efo_slim -subset: human_subset -subset: mouse_subset synonym: "pharyngula" RELATED [] synonym: "phylotypic stage" EXACT [] xref: DrerDO:0000052 @@ -258327,7 +259248,7 @@ synonym: "paired appendage" NARROW [VSAO:0000067] synonym: "pectoral or pelvic appendage" EXACT [https://orcid.org/0000-0002-6601-2165] synonym: "pelvic/pectoral appendage" EXACT [https://orcid.org/0000-0002-6601-2165] xref: VSAO:0000067 -is_a: UBERON:0000026 {source="VSAO"} ! appendage +is_a: UBERON:0000026 ! appendage is_a: UBERON:0010314 ! structure with developmental contribution from neural crest intersection_of: UBERON:0000026 ! appendage intersection_of: part_of UBERON:0010707 ! appendage girdle complex @@ -258339,7 +259260,7 @@ relationship: has_part UBERON:0002049 ! vasculature relationship: has_skeleton UBERON:0011582 ! paired limb/fin skeleton relationship: in_taxon NCBITaxon:7742 ! Vertebrata relationship: part_of RO:0002577 ! system -relationship: part_of UBERON:0010707 {source="VSAO"} ! appendage girdle complex +relationship: part_of UBERON:0010707 ! appendage girdle complex property_value: curator_notes "this class is the union of the classes limb, pectoral fin and pelvic fin." xsd:string [Term] @@ -260265,7 +261186,7 @@ is_a: UBERON:0000440 ! trabecula intersection_of: UBERON:0000440 ! trabecula intersection_of: part_of UBERON:0002370 ! thymus relationship: contributes_to_morphology_of UBERON:0002370 ! thymus -relationship: part_of UBERON:0002370 {source="MA"} ! thymus +relationship: part_of UBERON:0002370 ! thymus relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -262099,7 +263020,6 @@ synonym: "epithelium of urogenital sinus" EXACT [OBOL:automatic] synonym: "UGE" EXACT [PMID:18977204] xref: EHDAA2:0004061 xref: EMAPA:31509 -is_a: UBERON:0000483 {source="PMID:18977204"} ! epithelium is_a: UBERON:0009846 ! embryonic cloacal epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000164 ! primitive urogenital sinus @@ -267055,7 +267975,7 @@ xref: MA:0002604 is_a: UBERON:0002335 ! macula densa intersection_of: UBERON:0002335 ! macula densa intersection_of: part_of UBERON:0001291 ! thick ascending limb of loop of Henle -relationship: part_of UBERON:0001291 {source="MA"} ! thick ascending limb of loop of Henle +relationship: part_of UBERON:0001291 ! thick ascending limb of loop of Henle relationship: part_of UBERON:0006853 {source="MA"} ! renal cortex tubule property_value: editor_note "TODO - unify terminology - check DST = TAL? Note EMAPA class appears to refer to this segment" xsd:string @@ -267223,7 +268143,7 @@ xref: MA:0002621 is_a: UBERON:0005211 ! renal medulla interstitium intersection_of: UBERON:0005169 ! interstitial tissue intersection_of: part_of UBERON:0001293 ! outer medulla of kidney -relationship: part_of UBERON:0001293 {source="MA"} ! outer medulla of kidney +relationship: part_of UBERON:0001293 ! outer medulla of kidney relationship: part_of UBERON:0005211 {source="MA"} ! renal medulla interstitium [Term] @@ -267240,7 +268160,7 @@ xref: MA:0002620 is_a: UBERON:0005211 ! renal medulla interstitium intersection_of: UBERON:0005169 ! interstitial tissue intersection_of: part_of UBERON:0001294 ! inner medulla of kidney -relationship: part_of UBERON:0001294 {source="MA"} ! inner medulla of kidney +relationship: part_of UBERON:0001294 ! inner medulla of kidney relationship: part_of UBERON:0005211 {source="MA"} ! renal medulla interstitium [Term] @@ -268000,7 +268920,7 @@ intersection_of: UBERON:0005169 ! interstitial tissue intersection_of: part_of UBERON:0001225 ! cortex of kidney relationship: has_part CL:0000057 ! fibroblast relationship: has_part CL:0000451 ! dendritic cell -relationship: part_of UBERON:0001225 {source="MA"} ! cortex of kidney +relationship: part_of UBERON:0001225 ! cortex of kidney relationship: part_of UBERON:0005215 {source="MA"} ! kidney interstitium property_value: structure_notes "In the renal cortex, interstitial fibroblasts produce erythropoietin and are distinguished from other interstitial cells by their prominent F-actin cytoskeleton, abundance of rough endoplasmic reticulum, and by ecto-5'-nucleotidase expression in their plasma membrane. The resident dendritic cells belong to the mononuclear phagocyte system and fulfil a sentinel function. They are characterized by their expression of MHC class II and CD11c." xsd:string {source="PMID:18575881"} @@ -268759,7 +269679,7 @@ is_a: UBERON:0001231 ! nephron tubule intersection_of: UBERON:0001231 ! nephron tubule intersection_of: part_of UBERON:0005309 ! pronephric nephron relationship: dubious_for_taxon NCBITaxon:32524 {source="ISBN:0073040584"} ! Amniota -relationship: part_of UBERON:0005309 {source="GO"} ! pronephric nephron +relationship: part_of UBERON:0005309 ! pronephric nephron property_value: external_definition "Bilaterally paired tubes connecting the pronephric glomeruli to the pronephric ducts. In zebrafish and other teleosts, the pronephric nephron and tubules form after the pronephric duct, connecting to the anterior-most tip of the pronephric ducts. Drummond, 2000.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001558", ontology="TAO", source="ZFIN:curator"} [Term] @@ -271229,7 +272149,7 @@ xref: EHDAA2:0003125 xref: FBbt:00007006 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} xref: FMA:292313 xref: MIAA:0000019 -is_a: UBERON:0000465 ! material anatomical entity +is_a: UBERON:0000001 ! gross anatomical part relationship: capable_of GO:0032502 ! developmental process relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae relationship: present_in_taxon NCBITaxon:33208 ! Metazoa @@ -273810,7 +274730,7 @@ is_a: UBERON:0002329 ! somite is_a: UBERON:0005291 ! embryonic tissue intersection_of: UBERON:0002329 ! somite intersection_of: develops_from UBERON:0009617 ! head paraxial mesoderm -relationship: develops_from UBERON:0009617 {source="EHDAA2"} ! head paraxial mesoderm +relationship: develops_from UBERON:0009617 ! head paraxial mesoderm relationship: part_of UBERON:0009617 {source="EHDAA2"} ! head paraxial mesoderm property_value: development_notes "They provide the epaxial and hypaxial muscles of the neck, the pharyngeal and laryngeal muscles that develop in the caudal branchial arches and the musculature of the tongue. Despite their localisation in the head, myogenic precursors from occipital somites essentially follow the trunk programmes (E. H. Walters and S. D., unpublished). during evolution, have been secondarily incorporated into the head (Gans and Northcutt, 1983)" xsd:string {source="PMID:11830559"} property_value: external_ontology_notes "EHDAA2 has both 'head somite' and 'head somite group', with part_of and develops_from for latter" xsd:string {external_ontology="EHDAA2"} @@ -276033,7 +276953,6 @@ xref: EHDAA2:0001502 xref: EHDAA:5707 xref: SCTID:343518007 is_a: UBERON:0000476 {inconsistent_with="MP-def", source="EHDAA2"} ! acellular anatomical structure -is_a: UBERON:0004121 ! ectoderm-derived structure relationship: develops_from UBERON:0003902 {source="EHDAA2"} ! retinal neural layer relationship: located_in UBERON:0005606 {source="EHDAA2"} ! hyaloid cavity relationship: part_of UBERON:0008816 {source="cjm"} ! embryonic head @@ -282762,7 +283681,7 @@ xref: EHDAA:4128 xref: EMAPA:17707 xref: SCTID:361413002 xref: VHOG:0001505 -is_a: UBERON:0003914 {source="EHDAA2"} ! epithelial tube +is_a: UBERON:0003914 ! epithelial tube is_a: UBERON:0005291 ! embryonic tissue intersection_of: UBERON:0003914 ! epithelial tube intersection_of: connects UBERON:0001179 ! peritoneal cavity @@ -288935,7 +289854,7 @@ is_a: UBERON:0010304 {source="FMA"} ! non-keratinized stratified squamous epithe is_a: UBERON:0015808 ! eye epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001811 ! conjunctiva -relationship: part_of UBERON:0001811 {source="BTO"} ! conjunctiva +relationship: part_of UBERON:0001811 ! conjunctiva relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -288959,7 +289878,7 @@ is_a: UBERON:0035380 ! branch of anterior cerebral artery intersection_of: UBERON:0006347 ! communicating artery intersection_of: connecting_branch_of UBERON:0001624 ! anterior cerebral artery intersection_of: part_of UBERON:0003709 ! circle of Willis -relationship: connecting_branch_of UBERON:0001624 {source="FMA"} ! anterior cerebral artery +relationship: connecting_branch_of UBERON:0001624 ! anterior cerebral artery relationship: part_of UBERON:0003709 ! circle of Willis relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/2/2e/Circle_of_Willis_en.svg" xsd:anyURI @@ -290301,7 +291220,7 @@ xref: MA:0002609 is_a: UBERON:0007685 ! region of nephron tubule intersection_of: UBERON:0007685 ! region of nephron tubule intersection_of: part_of UBERON:0001225 ! cortex of kidney -relationship: part_of UBERON:0001225 {source="MA"} ! cortex of kidney +relationship: part_of UBERON:0001225 ! cortex of kidney [Term] id: UBERON:0006854 @@ -290763,10 +291682,10 @@ xref: VHOG:0000185 xref: XAO:0000053 xref: ZFA:0000998 is_a: UBERON:0004120 ! mesoderm-derived structure -is_a: UBERON:0005253 {source="ZFA"} ! head mesenchyme +is_a: UBERON:0005253 ! head mesenchyme intersection_of: UBERON:0005253 ! head mesenchyme intersection_of: develops_from UBERON:0000926 ! mesoderm -relationship: develops_from UBERON:0000926 {source="EHDAA2"} ! mesoderm +relationship: develops_from UBERON:0000926 ! mesoderm relationship: develops_from UBERON:0003063 {source="EHDAA2", source="XAO"} ! prechordal plate property_value: editor_note "merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements https://github.com/obophenotype/uberon/wiki/The-neural-crest NC meeting scheme" xsd:string @@ -291215,7 +292134,7 @@ intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0004721 ! crista ampullaris relationship: contributes_to_morphology_of UBERON:0004721 ! crista ampullaris relationship: has_part CL:0002316 {source="FMA"} ! supporting cell of vestibular epithelium -relationship: part_of UBERON:0004721 {source="MA"} ! crista ampullaris +relationship: part_of UBERON:0004721 ! crista ampullaris [Term] id: UBERON:0006936 @@ -291703,6 +292622,7 @@ name: nephridium def: "An exceretory tubule that usually opens to the exterior by a nephridiopore. The inner end of the tubule may be blind, ending in flame cells (protonephridium) or may open into the coelom through a ciliated funnel (metanephridium)." [Wikipedia:Nephridium] subset: human_subset subset: mouse_subset +synonym: "nephridia" EXACT OMO:0003004 [http://orcid.org/0000-0002-6601-2165] xref: BTO:0000923 xref: Wikipedia:Nephridium is_a: UBERON:0006555 ! excretory tube @@ -291995,7 +292915,7 @@ is_a: UBERON:0015228 ! circulatory organ intersection_of: UBERON:0015228 ! circulatory organ intersection_of: capable_of GO:0008015 ! blood circulation disjoint_from: UBERON:0015229 ! accessory circulatory organ -relationship: capable_of GO:0008015 {notes="GO uses blood circulation generically to include the haemolymphatic fluid of arthropods"} ! blood circulation +relationship: capable_of GO:0008015 ! blood circulation relationship: has_part CL:0002494 ! cardiocyte property_value: taxon_notes "note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. 'The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian'. Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis" xsd:string @@ -293603,8 +294523,6 @@ relationship: part_of UBERON:0005945 ! neurocranial trabecula id: UBERON:0007220 name: late embryonic stage def: "An embryo stage that covers late steps of the embryogenesis with a fully formed embryo still developing before birth or egg hatching." [https://orcid.org/0000-0003-3308-6245] -subset: human_subset -subset: mouse_subset synonym: "embryo late (growth) stage" EXACT [MIAA:0000399] synonym: "embryo late growth stage" RELATED [BTO:0000449] synonym: "embryo late stage" RELATED [BTO:0000449] @@ -293634,8 +294552,6 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/issues/565" xsd: id: UBERON:0007221 name: neonate stage def: "Of or pertaining to the period of time immediately following birth, or to the newborn." [http://en.wiktionary.org/wiki/neonatal, Wikipedia:Infant] -subset: human_subset -subset: mouse_subset synonym: "fledgling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165] synonym: "hatchling" NARROW SENSU [https://orcid.org/0000-0002-6601-2165] synonym: "hatchling stage" NARROW SENSU [https://orcid.org/0000-0002-6601-2165] @@ -293669,8 +294585,6 @@ property_value: seeAlso "https://github.com/obophenotype/uberon/issues/350" xsd: [Term] id: UBERON:0007222 name: late adult stage -subset: human_subset -subset: mouse_subset synonym: "elderly" RELATED [EV:0300123] synonym: "elderly stage" RELATED [EV:0300123] synonym: "geriatric" RELATED [EV:0300123] @@ -293861,8 +294775,6 @@ property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/f/f8/Gr [Term] id: UBERON:0007232 name: 2 cell stage -subset: human_subset -subset: mouse_subset synonym: "2-cell stage" EXACT [XAO:1000011] synonym: "Cleavage:2-cell" NARROW [ZFS:0000002] synonym: "NF stage 2 (2-cell)" NARROW SENSU [XAO:1000011] @@ -293878,8 +294790,6 @@ relationship: part_of UBERON:0000107 ! cleavage stage [Term] id: UBERON:0007233 name: 4 cell stage -subset: human_subset -subset: mouse_subset synonym: "4-cell stage" EXACT [XAO:1000013] synonym: "Cleavage:4-cell" NARROW [ZFS:0000003] synonym: "four-cell stage" EXACT [OBOL:automatic] @@ -293902,8 +294812,6 @@ consider: UBERON:0019250 [Term] id: UBERON:0007236 name: 8 cell stage -subset: human_subset -subset: mouse_subset synonym: "8-cell stage" EXACT [XAO:1000014] synonym: "Cleavage:8-cell" NARROW [ZFS:0000004] synonym: "eight-cell stage" EXACT [OBOL:automatic] @@ -295999,10 +296907,10 @@ subset: human_subset subset: mouse_subset synonym: "diencephalon decussation" EXACT [FMA:62446] xref: FMA:62446 -is_a: UBERON:0007418 {source="FMA"} ! neural decussation +is_a: UBERON:0007418 ! neural decussation intersection_of: UBERON:0007418 ! neural decussation intersection_of: part_of UBERON:0001894 ! diencephalon -relationship: part_of UBERON:0001894 {source="Obol"} ! diencephalon +relationship: part_of UBERON:0001894 ! diencephalon [Term] id: UBERON:0007440 @@ -296284,7 +297192,7 @@ synonym: "uterine tube epithelium" RELATED [FMA:62016] xref: FMA:62016 xref: MA:0001719 is_a: UBERON:0004804 {source="MA"} ! oviduct epithelium -is_a: UBERON:0007592 {source="FMA"} ! ciliated columnar epithelium +is_a: UBERON:0007592 ! ciliated columnar epithelium intersection_of: UBERON:0007592 ! ciliated columnar epithelium intersection_of: part_of UBERON:0000993 ! oviduct relationship: part_of UBERON:0000993 ! oviduct @@ -296313,7 +297221,7 @@ def: "Simple columnar epithelium in which the luminal side of the cells bears ci subset: human_subset subset: mouse_subset xref: FMA:64798 -is_a: UBERON:0000485 {source="FMA"} ! simple columnar epithelium +is_a: UBERON:0000485 ! simple columnar epithelium is_a: UBERON:0007601 ! ciliated epithelium intersection_of: UBERON:0000485 ! simple columnar epithelium intersection_of: has_part CL:0000067 ! ciliated epithelial cell @@ -296368,7 +297276,7 @@ subset: human_subset subset: mouse_subset xref: FMA:67521 is_a: UBERON:0007601 ! ciliated epithelium -is_a: UBERON:0007602 {source="FMA"} ! stratified columnar epithelium +is_a: UBERON:0007602 ! stratified columnar epithelium intersection_of: UBERON:0007602 ! stratified columnar epithelium intersection_of: has_part CL:0000067 ! ciliated epithelial cell relationship: has_part CL:0000067 ! ciliated epithelial cell @@ -296512,7 +297420,7 @@ xref: FMA:9701 is_a: UBERON:0007617 ! synovial cavity of joint intersection_of: UBERON:0007617 ! synovial cavity of joint intersection_of: part_of UBERON:0001486 ! hip joint -relationship: part_of UBERON:0001486 {source="FMA"} ! hip joint +relationship: part_of UBERON:0001486 ! hip joint [Term] id: UBERON:0007619 @@ -296565,8 +297473,6 @@ synonym: "eye pigment epithelium" RELATED [MESH:A09.371.670] xref: GAID:907 xref: MESH:D010857 is_a: UBERON:0019304 ! sensory organ epithelium -intersection_of: UBERON:0000483 ! epithelium -intersection_of: part_of UBERON:0000970 ! eye relationship: part_of UBERON:0000970 ! eye [Term] @@ -296915,7 +297821,7 @@ synonym: "ligamentum arteriosum (ductus arteriosus)" EXACT OMO:0003011 [FMA:1342 xref: FMA:13421 xref: SCTID:198009004 xref: Wikipedia:Ligamentum_arteriosum -is_a: UBERON:0006591 {source="FMA"} ! transformed artery +is_a: UBERON:0006591 ! transformed artery intersection_of: UBERON:0006591 ! transformed artery intersection_of: develops_from UBERON:0005440 ! ductus arteriosus relationship: develops_from UBERON:0005440 ! ductus arteriosus @@ -297292,11 +298198,11 @@ xref: FMA:63589 xref: NCIT:C33738 xref: SCTID:368724008 xref: UMLS:C0226971 {source="ncithesaurus:Taste_Pore"} -is_a: UBERON:0000161 {source="FMA"} ! orifice +is_a: UBERON:0000161 ! orifice intersection_of: UBERON:0000161 ! orifice intersection_of: part_of UBERON:0001727 ! taste bud relationship: continuous_with UBERON:0000167 ! oral cavity -relationship: part_of UBERON:0001727 {source="FMA"} ! taste bud +relationship: part_of UBERON:0001727 ! taste bud property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/0/0e/Taste_bud.svg" xsd:anyURI [Term] @@ -297767,7 +298673,7 @@ is_a: UBERON:0007722 ! interphalangeal joint of manus intersection_of: UBERON:0007722 ! interphalangeal joint of manus intersection_of: part_of UBERON:0003622 ! manual digit 2 relationship: connects UBERON:0003641 {cardinality="2"} ! pedal digit 2 phalanx -relationship: part_of UBERON:0003622 {source="EMAPA"} ! manual digit 2 +relationship: part_of UBERON:0003622 ! manual digit 2 [Term] id: UBERON:0007730 @@ -298234,7 +299140,7 @@ synonym: "set of secondary teeth" EXACT [FMA:75152] xref: FMA:75152 xref: GAID:1251 xref: MESH:D019229 -is_a: UBERON:0003672 {source="FMA"} ! dentition +is_a: UBERON:0003672 ! dentition intersection_of: UBERON:0003672 ! dentition intersection_of: developmentally_replaces UBERON:0007116 ! primary dentition relationship: developmentally_replaces UBERON:0007116 ! primary dentition @@ -298282,7 +299188,7 @@ xref: CALOHA:TS-1081 is_a: UBERON:0001919 ! endothelium of vein intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0002066 ! umbilical vein -relationship: part_of UBERON:0002066 {source="BTO"} ! umbilical vein +relationship: part_of UBERON:0002066 ! umbilical vein [Term] id: UBERON:0007778 @@ -298292,10 +299198,9 @@ subset: human_subset subset: mouse_subset xref: BTO:0000857 is_a: UBERON:0001917 ! endothelium of artery -is_a: UBERON:0001986 {source="BTO"} ! endothelium intersection_of: UBERON:0001986 ! endothelium intersection_of: part_of UBERON:0001310 ! umbilical artery -relationship: part_of UBERON:0001310 {source="BTO"} ! umbilical artery +relationship: part_of UBERON:0001310 ! umbilical artery [Term] id: UBERON:0007779 @@ -298435,7 +299340,7 @@ synonym: "preen oil gland" RELATED [] xref: BTO:0001420 xref: SCTID:48626006 xref: Wikipedia:Uropygial_gland -is_a: UBERON:0002365 {source="BTO"} ! exocrine gland +is_a: UBERON:0002365 ! exocrine gland intersection_of: UBERON:0002365 ! exocrine gland intersection_of: produces UBERON:0007803 ! preen oil relationship: capable_of_part_of GO:0007625 ! grooming behavior @@ -298747,7 +299652,7 @@ is_a: UBERON:0002358 ! peritoneum intersection_of: UBERON:0002095 ! mesentery intersection_of: part_of UBERON:0002358 ! peritoneum relationship: part_of UBERON:0001178 {source="FMA"} ! visceral peritoneum -relationship: part_of UBERON:0002358 {source="ZFA"} ! peritoneum +relationship: part_of UBERON:0002358 ! peritoneum [Term] id: UBERON:0007827 @@ -299095,7 +300000,7 @@ xref: FMA:55107 xref: VSAO:0000000 xref: XAO:0004013 xref: ZFA:0001501 -is_a: UBERON:0004765 {source="VSAO"} ! skeletal element +is_a: UBERON:0004765 ! skeletal element intersection_of: UBERON:0004765 ! skeletal element intersection_of: composed_primarily_of UBERON:0002418 ! cartilage tissue relationship: composed_primarily_of UBERON:0002418 ! cartilage tissue @@ -299135,7 +300040,7 @@ xref: UMLS:C0225333 {source="ncithesaurus:Regular_Dense_Connective_Tissue"} xref: VSAO:0000050 xref: Wikipedia:Dense_regular_connective_tissue xref: XAO:0004030 -is_a: UBERON:0007845 {source="FMA"} ! regular connective tissue +is_a: UBERON:0007845 ! regular connective tissue is_a: UBERON:0011823 {source="ncithesaurus"} ! dense connective tissue intersection_of: UBERON:0007845 ! regular connective tissue intersection_of: composed_primarily_of UBERON:0011860 ! collection of collagen fibrils @@ -299180,10 +300085,10 @@ synonym: "cranial bone" RELATED [] synonym: "head or neck bone" EXACT [MA:0000569] xref: EMAPA:37245 {source="MA:th"} xref: MA:0000569 -is_a: UBERON:0001474 {source="MA"} ! bone element +is_a: UBERON:0001474 ! bone element intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0007811 ! craniocervical region -relationship: part_of UBERON:0007811 {source="MA"} ! craniocervical region +relationship: part_of UBERON:0007811 ! craniocervical region [Term] id: UBERON:0007958 @@ -299280,7 +300185,7 @@ subset: mouse_subset synonym: "sesamoid bone of hand" EXACT [FMA:42353] xref: FMA:42353 xref: SCTID:368448000 -is_a: UBERON:0001479 {source="FMA"} ! sesamoid bone +is_a: UBERON:0001479 ! sesamoid bone is_a: UBERON:0005897 ! manus bone is_a: UBERON:0011141 ! appendicular ossicle intersection_of: UBERON:0001479 ! sesamoid bone @@ -299297,7 +300202,7 @@ subset: mouse_subset synonym: "sesamoid bone of foot" EXACT [FMA:45096] xref: FMA:45096 xref: SCTID:244675002 -is_a: UBERON:0001479 {source="FMA"} ! sesamoid bone +is_a: UBERON:0001479 ! sesamoid bone is_a: UBERON:0005899 ! pes bone is_a: UBERON:0011141 ! appendicular ossicle intersection_of: UBERON:0001479 ! sesamoid bone @@ -299329,7 +300234,7 @@ subset: human_subset subset: mouse_subset synonym: "girdle joint" EXACT [OBOL:automatic] xref: MA:0001505 -is_a: UBERON:0000982 {source="MA"} ! skeletal joint +is_a: UBERON:0000982 ! skeletal joint intersection_of: UBERON:0000982 ! skeletal joint intersection_of: part_of UBERON:0007823 ! appendage girdle region relationship: connects UBERON:0007828 ! girdle bone/zone @@ -299383,7 +300288,7 @@ synonym: "tendon of biceps brachii muscle" RELATED [FMA:38152] xref: EMAPA:25053 xref: FMA:38152 xref: SCTID:361886007 -is_a: UBERON:0000043 {source="FMA"} ! tendon +is_a: UBERON:0000043 ! tendon intersection_of: UBERON:0000043 ! tendon intersection_of: attaches_to UBERON:0001507 ! biceps brachii relationship: attaches_to UBERON:0001507 ! biceps brachii @@ -299400,7 +300305,7 @@ synonym: "triceps brachii tendon" EXACT [FMA:38380] synonym: "triceps tendon" EXACT [] xref: FMA:38380 xref: SCTID:245105007 -is_a: UBERON:0000043 {source="FMA"} ! tendon +is_a: UBERON:0000043 ! tendon intersection_of: UBERON:0000043 ! tendon intersection_of: attaches_to UBERON:0001509 ! triceps brachii relationship: attaches_to UBERON:0001509 ! triceps brachii @@ -299619,10 +300524,10 @@ xref: EMAPA:37259 {source="MA:th"} xref: MA:0000571 xref: TAO:0000328 xref: ZFA:0000328 -is_a: UBERON:0001015 {source="MA"} ! musculature +is_a: UBERON:0001015 ! musculature intersection_of: UBERON:0001015 ! musculature intersection_of: part_of UBERON:0007811 ! craniocervical region -relationship: part_of UBERON:0007811 {source="MA"} ! craniocervical region +relationship: part_of UBERON:0007811 ! craniocervical region property_value: external_ontology_notes "in MA this is restricted to skeletal muscles" xsd:string {external_ontology="MA"} [Term] @@ -299674,7 +300579,7 @@ is_a: UBERON:0002324 ! muscle of back is_a: UBERON:0003833 {source="MA"} ! abdominal segment muscle intersection_of: UBERON:0002324 ! muscle of back intersection_of: part_of UBERON:0005462 ! lower back -relationship: part_of UBERON:0005462 {source="MA"} ! lower back +relationship: part_of UBERON:0005462 ! lower back [Term] id: UBERON:0008243 @@ -299689,7 +300594,7 @@ is_a: UBERON:0002324 ! muscle of back is_a: UBERON:0003830 {source="MA"} ! thoracic segment muscle intersection_of: UBERON:0002324 ! muscle of back intersection_of: part_of UBERON:0008231 ! dorsal thoracic segment of trunk -relationship: part_of UBERON:0008231 {source="MA"} ! dorsal thoracic segment of trunk +relationship: part_of UBERON:0008231 ! dorsal thoracic segment of trunk [Term] id: UBERON:0008245 @@ -299813,7 +300718,7 @@ def: "A clavicle that is in the right side of a entire appendicular skeleton." [ subset: human_subset subset: mouse_subset xref: FMA:13322 -is_a: UBERON:0001105 {source="FMA"} ! clavicle bone +is_a: UBERON:0001105 ! clavicle bone intersection_of: UBERON:0001105 ! clavicle bone intersection_of: in_right_side_of UBERON:0002091 ! appendicular skeleton relationship: in_right_side_of UBERON:0002091 ! appendicular skeleton @@ -299826,7 +300731,7 @@ def: "A clavicle that is in the left side of a entire appendicular skeleton." [O subset: human_subset subset: mouse_subset xref: FMA:13323 -is_a: UBERON:0001105 {source="FMA"} ! clavicle bone +is_a: UBERON:0001105 ! clavicle bone intersection_of: UBERON:0001105 ! clavicle bone intersection_of: in_left_side_of UBERON:0002091 ! appendicular skeleton relationship: in_left_side_of UBERON:0002091 ! appendicular skeleton @@ -299978,7 +300883,7 @@ relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 relationship: dc-contributor https://orcid.org/0000-0003-1980-3228 relationship: develops_from UBERON:0002342 {is_entailed="true", source="https://github.com/obophenotype/uberon/wiki/The-neural-crest"} ! neural crest relationship: develops_from UBERON:0008969 {source="PMID:19767574", source="Wikipedia:Dental_follicle"} ! dental follicle -relationship: part_of UBERON:0001758 {source="BTO"} ! periodontium +relationship: part_of UBERON:0001758 ! periodontium relationship: seeAlso FMA:76870 property_value: depiction "https://upload.wikimedia.org/wikipedia/commons/d/dc/The_Periodontium.jpg" xsd:anyURI property_value: external_definition "The collagen fibers, running from the cementum to the alveolar bone, that suspend a tooth in its socket; they include apical, oblique, horizontal, and alveolar crest fibers, indicating that the orientation of the fibers varies at different levels[http://www.drugs.com/dict/desmodentium.html]." xsd:string {source="http://www.drugs.com/dict/desmodentium.html"} @@ -300810,7 +301715,7 @@ intersection_of: UBERON:0000483 ! epithelium intersection_of: adjacent_to UBERON:0000464 ! anatomical space intersection_of: part_of UBERON:0004135 ! distal tubule relationship: adjacent_to UBERON:0000464 ! anatomical space -relationship: part_of UBERON:0004135 {source="BTO"} ! distal tubule +relationship: part_of UBERON:0004135 ! distal tubule property_value: editor_note "See https://github.com/obophenotype/uberon/issues/1305" xsd:string [Term] @@ -300823,7 +301728,7 @@ xref: BTO:0004803 is_a: UBERON:0002424 ! oral epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0006956 ! buccal mucosa -relationship: part_of UBERON:0006956 {source="BTO"} ! buccal mucosa +relationship: part_of UBERON:0006956 ! buccal mucosa [Term] id: UBERON:0008424 @@ -302124,7 +303029,7 @@ xref: FMA:46825 xref: MFMO:0000122 xref: SCTID:244744003 xref: Wikipedia:Mentalis -is_a: UBERON:0001577 {source="MFMO"} ! facial muscle +is_a: UBERON:0001577 ! facial muscle is_a: UBERON:0013765 ! digestive system element is_a: UBERON:0015212 ! lateral structure intersection_of: UBERON:0001577 ! facial muscle @@ -302178,7 +303083,7 @@ xref: FMA:46838 xref: MFMO:0000141 xref: SCTID:244755003 xref: Wikipedia:Risorius -is_a: UBERON:0001577 {source="MFMO"} ! facial muscle +is_a: UBERON:0001577 ! facial muscle intersection_of: UBERON:0001577 ! facial muscle intersection_of: attaches_to UBERON:0001597 ! masseter muscle intersection_of: attaches_to UBERON:0002097 ! skin of body @@ -302646,7 +303551,7 @@ xref: UMLS:C1516906 {source="ncithesaurus:Epiblast"} is_a: UBERON:0002532 ! epiblast (generic) intersection_of: UBERON:0002532 ! epiblast (generic) intersection_of: develops_from UBERON:0000087 ! inner cell mass -relationship: develops_from UBERON:0000087 {source="Wikipedia"} ! inner cell mass +relationship: develops_from UBERON:0000087 ! inner cell mass relationship: part_of UBERON:0000091 ! bilaminar disc [Term] @@ -302661,7 +303566,7 @@ xref: ZFA:0000018 is_a: UBERON:0002532 ! epiblast (generic) intersection_of: UBERON:0002532 ! epiblast (generic) intersection_of: develops_from UBERON:0004749 ! blastodisc -relationship: develops_from UBERON:0004749 {source="Wikipedia"} ! blastodisc +relationship: develops_from UBERON:0004749 ! blastodisc relationship: dubious_for_taxon NCBITaxon:40674 ! Mammalia relationship: part_of UBERON:0002541 {source="ZFA"} ! germ ring property_value: axiom_lost_from_external_ontology "relationship type change: subclass embryonic structure (VSAO:0000178) CHANGED TO: develops_from embryonic structure (UBERON:0002050)[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0000018", ontology="TAO"} @@ -303295,7 +304200,6 @@ xref: MA:0001735 xref: NCIT:C32484 xref: SCTID:279623004 xref: UMLS:C0458632 {source="ncithesaurus:Duct_of_the_Epididymis"} -is_a: UBERON:0000058 {source="FMA"} ! duct is_a: UBERON:0005904 ! duct of male reproductive system intersection_of: UBERON:0000058 ! duct intersection_of: branching_part_of UBERON:0001301 ! epididymis @@ -303599,7 +304503,7 @@ synonym: "scrotal ligament" RELATED [Wikipedia:Gubernaculum] xref: SCTID:279592009 xref: Wikipedia:Scrotal_ligament is_a: UBERON:0005156 ! reproductive structure -is_a: UBERON:0008841 {source="Obol"} ! suspensory ligament +is_a: UBERON:0008841 ! suspensory ligament intersection_of: UBERON:0008841 ! suspensory ligament intersection_of: attaches_to UBERON:0000473 ! testis relationship: attaches_to UBERON:0000473 ! testis @@ -303687,7 +304591,7 @@ intersection_of: UBERON:0000211 ! ligament intersection_of: connects UBERON:0004765 ! skeletal element intersection_of: part_of UBERON:0001434 ! skeletal system relationship: composed_primarily_of UBERON:0007846 {source="VSAO"} ! dense regular connective tissue -relationship: connects UBERON:0004765 {notes="bones or cartilage organs"} ! skeletal element +relationship: connects UBERON:0004765 ! skeletal element relationship: has_part CL:0000057 {source="AEO"} ! fibroblast relationship: has_part CL:0000327 {source="AEO"} ! extracellular matrix secreting cell relationship: part_of UBERON:0001434 ! skeletal system @@ -303823,7 +304727,7 @@ intersection_of: part_of UBERON:0001167 ! wall of stomach relationship: composed_primarily_of UBERON:0001135 ! smooth muscle tissue relationship: contributes_to_morphology_of UBERON:0001135 ! smooth muscle tissue relationship: contributes_to_morphology_of UBERON:0001167 ! wall of stomach -relationship: part_of UBERON:0001167 {source="FMA"} ! wall of stomach +relationship: part_of UBERON:0001167 ! wall of stomach relationship: part_of UBERON:0004222 {source="MA-abduced"} ! stomach smooth muscle property_value: structure_notes "the muscularis externa in the stomach differs from that of other GI organs in that it has three layers of smooth muscle instead of two" xsd:string {source="WP"} @@ -304283,7 +305187,7 @@ xref: NCIT:C32728 xref: SCTID:303051005 xref: UMLS:C0226766 {source="ncithesaurus:Hemorrhoidal_Plexus"} xref: Wikipedia:Rectal_venous_plexus -is_a: UBERON:0001593 {source="FMA"} ! venous plexus +is_a: UBERON:0001593 ! venous plexus intersection_of: UBERON:0001593 ! venous plexus intersection_of: surrounds UBERON:0001052 ! rectum relationship: surrounds UBERON:0001052 ! rectum @@ -304484,7 +305388,7 @@ xref: TAO:0000243 xref: ZFA:0000243 is_a: UBERON:0004121 ! ectoderm-derived structure is_a: UBERON:0035555 ! lateral line sense organ -relationship: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception +relationship: capable_of GO:0050956 ! electroception relationship: develops_from UBERON:0009128 {source="DOI:10.1038/ncomms1502"} ! lateral line placode relationship: develops_from UBERON:2005227 ! protoneuromast relationship: has_part CL:0000856 ! neuromast hair cell @@ -304535,7 +305439,7 @@ is_a: UBERON:0004756 {source="wd"} ! dermal skeletal element is_a: UBERON:0007842 {source="VSAO"} ! membrane bone intersection_of: UBERON:0001474 ! bone element intersection_of: part_of UBERON:0010364 ! dermal skeleton -relationship: part_of UBERON:0010364 {source="VSAO"} ! dermal skeleton +relationship: part_of UBERON:0010364 ! dermal skeleton property_value: external_definition "Intramembranous bone that forms superficially in the organism.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001590", ontology="TAO", source="TAO:wd"} property_value: external_ontology_notes "other AOs are not yet in sync with this classification" xsd:string @@ -304614,7 +305518,7 @@ xref: AAO:0001006 xref: TAO:0002104 is_a: UBERON:0003103 {source="TAO"} ! compound organ is_a: UBERON:0035555 ! lateral line sense organ -relationship: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception +relationship: capable_of GO:0050956 ! electroception relationship: develops_from UBERON:0009128 {gci_filler="NCBITaxon:8295", gci_relation="part_of", source="DOI:10.1038/ncomms1502"} ! lateral line placode relationship: develops_from UBERON:0009128 {gci_relation="part_of", gci_filler="NCBITaxon:32443", source="DOI:10.1038/ncomms1502"} ! lateral line placode relationship: innervated_by UBERON:0008906 ! lateral line nerve @@ -304641,7 +305545,7 @@ synonym: "ampullae of Lorenzini" EXACT OMO:0003004 [Wikipedia:Ampullae_of_Lorenz xref: Wikipedia:Ampullae_of_Lorenzini is_a: UBERON:0003103 ! compound organ is_a: UBERON:0035555 ! lateral line sense organ -relationship: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception +relationship: capable_of GO:0050956 ! electroception relationship: never_in_taxon NCBITaxon:32443 {source="Wikipedia"} ! Teleostei relationship: never_in_taxon NCBITaxon:32523 ! Tetrapoda relationship: part_of UBERON:0002540 ! lateral line system @@ -305007,10 +305911,10 @@ xref: EMAPA:35522 xref: FMA:27360 xref: MA:0003168 xref: SCTID:201712001 -is_a: UBERON:0000353 {source="FMA"} ! parenchyma +is_a: UBERON:0000353 ! parenchyma intersection_of: UBERON:0000353 ! parenchyma intersection_of: part_of UBERON:0002048 ! lung -relationship: part_of UBERON:0002048 {source="FMA"} ! lung +relationship: part_of UBERON:0002048 ! lung [Term] id: UBERON:0008947 @@ -305111,7 +306015,7 @@ xref: galen:UpperLobeOfLeftLung xref: NCIT:C33021 xref: SCTID:361984006 xref: UMLS:C1261076 {source="ncithesaurus:Upper_Lobe_of_the_Left_Lung"} -is_a: UBERON:0008948 {source="FMA"} ! upper lobe of lung +is_a: UBERON:0008948 ! upper lobe of lung is_a: UBERON:0008951 ! left lung lobe intersection_of: UBERON:0008948 ! upper lobe of lung intersection_of: part_of UBERON:0002168 ! left lung @@ -305138,7 +306042,7 @@ xref: galen:LowerLobeOfLeftLung xref: NCIT:C33020 xref: SCTID:361989001 xref: UMLS:C1261077 {source="ncithesaurus:Lower_Lobe_of_the_Left_Lung"} -is_a: UBERON:0008949 {source="FMA"} ! lower lobe of lung +is_a: UBERON:0008949 ! lower lobe of lung is_a: UBERON:0008951 ! left lung lobe intersection_of: UBERON:0008949 ! lower lobe of lung intersection_of: part_of UBERON:0002168 ! left lung @@ -305528,10 +306432,10 @@ synonym: "parenchyma of kidney" EXACT [FMA:15574] xref: BTO:0003604 xref: FMA:15574 xref: SCTID:29704000 -is_a: UBERON:0000353 {source="FMA"} ! parenchyma +is_a: UBERON:0000353 ! parenchyma intersection_of: UBERON:0000353 ! parenchyma intersection_of: part_of UBERON:0002113 ! kidney -relationship: part_of UBERON:0002113 {source="FMA"} ! kidney +relationship: part_of UBERON:0002113 ! kidney [Term] id: UBERON:0008989 @@ -306845,11 +307749,11 @@ synonym: "epibranchial ganglia" EXACT OMO:0003004 [ZFA:0001555] xref: BTO:0006250 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", pav:authoredBy="https://orcid.org/0000-0003-4423-4370"} xref: TAO:0001555 xref: ZFA:0001555 -is_a: UBERON:0001714 {source="ZFA"} ! cranial ganglion +is_a: UBERON:0001714 ! cranial ganglion is_a: UBERON:0004121 ! ectoderm-derived structure intersection_of: UBERON:0001714 ! cranial ganglion intersection_of: develops_from UBERON:0003078 ! epibranchial placode -relationship: develops_from UBERON:0003078 {source="NCBIBook:NBK53175"} ! epibranchial placode +relationship: develops_from UBERON:0003078 ! epibranchial placode relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -307284,13 +308188,12 @@ subset: mouse_subset xref: EHDAA2:0001077 xref: EMAPA:16810 xref: FMA:312659 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0009501 ! mesenchyme of fronto-nasal process intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0004068 ! medial nasal prominence disjoint_from: UBERON:0009205 {source="lexical"} ! lateral nasal process mesenchyme relationship: develops_from UBERON:0007213 {source="EHDAA2"} ! mesenchyme derived from head neural crest -relationship: part_of UBERON:0004068 {source="EHDAA2"} ! medial nasal prominence +relationship: part_of UBERON:0004068 ! medial nasal prominence [Term] id: UBERON:0009205 @@ -308541,7 +309444,7 @@ xref: EMAPA:16385 is_a: UBERON:0010042 ! 1st arch mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: part_of UBERON:0007237 ! 1st arch mandibular component -relationship: part_of UBERON:0007237 {source="EMAPA"} ! 1st arch mandibular component +relationship: part_of UBERON:0007237 ! 1st arch mandibular component [Term] id: UBERON:0009585 @@ -308573,7 +309476,7 @@ is_a: UBERON:0009596 ! mesenchyme of interdigital region between digits 1 and 2 is_a: UBERON:0009600 ! mesenchyme of interdigital region of manus intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006026 ! interdigital region between manual digits 1 and 2 -relationship: part_of UBERON:0006026 {source="EMAPA"} ! interdigital region between manual digits 1 and 2 +relationship: part_of UBERON:0006026 ! interdigital region between manual digits 1 and 2 [Term] id: UBERON:0009587 @@ -308589,7 +309492,7 @@ is_a: UBERON:0009597 ! mesenchyme of interdigital region between digits 2 and 3 is_a: UBERON:0009600 ! mesenchyme of interdigital region of manus intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006029 ! interdigital region between manual digits 2 and 3 -relationship: part_of UBERON:0006029 {source="EMAPA"} ! interdigital region between manual digits 2 and 3 +relationship: part_of UBERON:0006029 ! interdigital region between manual digits 2 and 3 [Term] id: UBERON:0009588 @@ -308605,7 +309508,7 @@ is_a: UBERON:0009598 ! mesenchyme of interdigital region between digits 3 and 4 is_a: UBERON:0009600 ! mesenchyme of interdigital region of manus intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006032 ! interdigital region between manual digits 3 and 4 -relationship: part_of UBERON:0006032 {source="EMAPA"} ! interdigital region between manual digits 3 and 4 +relationship: part_of UBERON:0006032 ! interdigital region between manual digits 3 and 4 [Term] id: UBERON:0009589 @@ -308621,7 +309524,7 @@ is_a: UBERON:0009599 ! mesenchyme of interdigital region between digits 4 and 5 is_a: UBERON:0009600 ! mesenchyme of interdigital region of manus intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006035 ! interdigital region between manual digits 4 and 5 -relationship: part_of UBERON:0006035 {source="EMAPA"} ! interdigital region between manual digits 4 and 5 +relationship: part_of UBERON:0006035 ! interdigital region between manual digits 4 and 5 [Term] id: UBERON:0009590 @@ -308637,7 +309540,7 @@ is_a: UBERON:0009596 ! mesenchyme of interdigital region between digits 1 and 2 is_a: UBERON:0009601 ! mesenchyme of interdigital region of pes intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006038 ! interdigital region between pedal digits 1 and 2 -relationship: part_of UBERON:0006038 {source="EMAPA"} ! interdigital region between pedal digits 1 and 2 +relationship: part_of UBERON:0006038 ! interdigital region between pedal digits 1 and 2 [Term] id: UBERON:0009591 @@ -308653,7 +309556,7 @@ is_a: UBERON:0009597 ! mesenchyme of interdigital region between digits 2 and 3 is_a: UBERON:0009601 ! mesenchyme of interdigital region of pes intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006041 ! interdigital region between pedal digits 2 and 3 -relationship: part_of UBERON:0006041 {source="EMAPA"} ! interdigital region between pedal digits 2 and 3 +relationship: part_of UBERON:0006041 ! interdigital region between pedal digits 2 and 3 [Term] id: UBERON:0009592 @@ -308669,7 +309572,7 @@ is_a: UBERON:0009598 ! mesenchyme of interdigital region between digits 3 and 4 is_a: UBERON:0009601 ! mesenchyme of interdigital region of pes intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006044 ! interdigital region between pedal digits 3 and 4 -relationship: part_of UBERON:0006044 {source="EMAPA"} ! interdigital region between pedal digits 3 and 4 +relationship: part_of UBERON:0006044 ! interdigital region between pedal digits 3 and 4 [Term] id: UBERON:0009593 @@ -308685,7 +309588,7 @@ is_a: UBERON:0009599 ! mesenchyme of interdigital region between digits 4 and 5 is_a: UBERON:0009601 ! mesenchyme of interdigital region of pes intersection_of: UBERON:0009585 ! interdigital region mesenchyme intersection_of: part_of UBERON:0006047 ! interdigital region between pedal digits 4 and 5 -relationship: part_of UBERON:0006047 {source="EMAPA"} ! interdigital region between pedal digits 4 and 5 +relationship: part_of UBERON:0006047 ! interdigital region between pedal digits 4 and 5 [Term] id: UBERON:0009596 @@ -308985,7 +309888,7 @@ xref: MESH:D013126 xref: NCIT:C12791 xref: UMLS:C0037940 {source="ncithesaurus:Spinal_Nerve_Root"} xref: ZFA:0005578 -is_a: UBERON:0002211 {source="FMA"} ! nerve root +is_a: UBERON:0002211 ! nerve root intersection_of: UBERON:0002211 ! nerve root intersection_of: extends_fibers_into UBERON:0001780 ! spinal nerve intersection_of: extends_fibers_into UBERON:0002240 ! spinal cord @@ -309394,7 +310297,7 @@ xref: UMLS:C1709901 {source="ncithesaurus:Renal_Tubule_Basement_Membrane"} is_a: UBERON:0005769 ! basement membrane of epithelium intersection_of: UBERON:0005769 ! basement membrane of epithelium intersection_of: part_of UBERON:0001231 ! nephron tubule -relationship: part_of UBERON:0001231 {source="MA"} ! nephron tubule +relationship: part_of UBERON:0001231 ! nephron tubule relationship: part_of UBERON:0004810 {is_inferred="true", source="https://github.com/obophenotype/uberon/wiki/Inferring-part-of-relationships"} ! nephron tubule epithelium [Term] @@ -309900,7 +310803,7 @@ is_a: UBERON:0003351 ! pharyngeal epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0001051 ! hypopharynx relationship: develops_from UBERON:0007690 {source="EHDAA2"} ! early pharyngeal endoderm -relationship: part_of UBERON:0001051 {source="EHDAA2"} ! hypopharynx +relationship: part_of UBERON:0001051 ! hypopharynx relationship: part_of UBERON:0003929 {source="EHDAA2"} ! digestive tract epithelium [Term] @@ -313411,7 +314314,7 @@ subset: human_subset subset: mouse_subset xref: EHDAA2:0000696 xref: EHDAA:2951 -is_a: UBERON:0003103 {source="EHDAA2"} ! compound organ +is_a: UBERON:0003103 ! compound organ is_a: UBERON:0005423 ! developing anatomical structure is_a: UBERON:0013765 ! digestive system element intersection_of: UBERON:0003103 ! compound organ @@ -313968,7 +314871,7 @@ subset: pheno_slim xref: EMAPA:35759 xref: MA:0002943 xref: neuronames:2857 -is_a: UBERON:0005408 {source="MA"} ! circumventricular organ +is_a: UBERON:0005408 ! circumventricular organ is_a: UBERON:0010133 {source="MA"} ! neuroendocrine gland intersection_of: UBERON:0005408 ! circumventricular organ intersection_of: part_of UBERON:0000949 ! endocrine system @@ -315514,7 +316417,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0009584 ! 1st arch mandibular mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0007098 ! mandibular neural crest -relationship: part_of UBERON:0009584 {source="EHDAA2"} ! 1st arch mandibular mesenchyme +relationship: part_of UBERON:0009584 ! 1st arch mandibular mesenchyme relationship: part_of UBERON:0010258 {source="EHDAA2"} ! mesenchyme from rhombencephalic neural crest [Term] @@ -315524,14 +316427,13 @@ def: "Mesenchyme that develops_from a neural crest and is part of a 1st arch max subset: human_subset subset: mouse_subset xref: EHDAA2:0000044 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0010045 ! 1st arch maxillary mesenchyme is_a: UBERON:0010259 ! 1st arch mesenchyme from neural crest intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0010045 ! 1st arch maxillary mesenchyme relationship: develops_from UBERON:0002342 ! neural crest -relationship: part_of UBERON:0010045 {source="EHDAA2"} ! 1st arch maxillary mesenchyme +relationship: part_of UBERON:0010045 ! 1st arch maxillary mesenchyme relationship: part_of UBERON:0010258 {source="EHDAA2"} ! mesenchyme from rhombencephalic neural crest [Term] @@ -315554,7 +316456,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0005689 ! 2nd arch mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0007099 ! hyoid neural crest -relationship: part_of UBERON:0005689 {source="EHDAA2"} ! 2nd arch mesenchyme +relationship: part_of UBERON:0005689 ! 2nd arch mesenchyme relationship: part_of UBERON:0010258 {source="EHDAA2"} ! mesenchyme from rhombencephalic neural crest [Term] @@ -315580,7 +316482,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0005690 ! 3rd arch mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0003852 {source="EHDAA2-inferred"} ! rhombencephalon neural crest -relationship: part_of UBERON:0005690 {source="EHDAA2"} ! 3rd arch mesenchyme +relationship: part_of UBERON:0005690 ! 3rd arch mesenchyme property_value: homology_notes "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000571", ontology="VHOG", source="DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)", source="http://bgee.unil.ch/"} [Term] @@ -315606,7 +316508,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0005691 ! 4th arch mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0003852 {source="EHDAA2-inferred"} ! rhombencephalon neural crest -relationship: part_of UBERON:0005691 {source="EHDAA2"} ! 4th arch mesenchyme +relationship: part_of UBERON:0005691 ! 4th arch mesenchyme relationship: part_of UBERON:0010258 {source="EHDAA2"} ! mesenchyme from rhombencephalic neural crest property_value: homology_notes "In all vertebrates, the pharyngeal apparatus develops from a series of bulges found on the lateral surface of the head, the pharyngeal arches, which consist of a number of different embryonic cell types. Each arch has an external covering of ectoderm and inner covering of endoderm, and between these a mesenchymal filling of neural crest with a central core of mesoderm.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0000580", ontology="VHOG", source="DOI:10.1046/j.1469-7580.2001.19910133.x Graham A. The development and evolution of the pharyngeal arches. J Anat (2001)", source="http://bgee.unil.ch/"} @@ -315629,7 +316531,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0010031 ! 6th arch mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0003852 {source="EHDAA2-inferred"} ! rhombencephalon neural crest -relationship: part_of UBERON:0010031 {source="EHDAA2"} ! 6th arch mesenchyme +relationship: part_of UBERON:0010031 ! 6th arch mesenchyme relationship: part_of UBERON:0010258 {source="EHDAA2"} ! mesenchyme from rhombencephalic neural crest [Term] @@ -316491,7 +317393,6 @@ def: "Mesenchyme that develops_from a neural crest and is part of a maxillary pr subset: human_subset subset: mouse_subset xref: EHDAA2:0004601 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0009526 ! maxillary process mesenchyme is_a: UBERON:0010258 ! mesenchyme from rhombencephalic neural crest intersection_of: UBERON:0003104 ! mesenchyme @@ -316499,7 +317400,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0009526 ! maxillary process mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0010253 {source="EHDAA2"} ! 1st arch maxillary mesenchyme from neural crest -relationship: part_of UBERON:0009526 {source="EHDAA2"} ! maxillary process mesenchyme +relationship: part_of UBERON:0009526 ! maxillary process mesenchyme [Term] id: UBERON:0010335 @@ -316508,7 +317409,6 @@ def: "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part subset: human_subset subset: mouse_subset xref: EHDAA2:0004602 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0004120 ! mesoderm-derived structure is_a: UBERON:0009526 ! maxillary process mesenchyme intersection_of: UBERON:0003104 ! mesenchyme @@ -316516,7 +317416,7 @@ intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0009526 ! maxillary process mesenchyme relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm relationship: develops_from UBERON:0010338 {source="EHDAA2"} ! 1st arch maxillary mesenchyme from head mesenchyme -relationship: part_of UBERON:0009526 {source="EHDAA2"} ! maxillary process mesenchyme +relationship: part_of UBERON:0009526 ! maxillary process mesenchyme [Term] id: UBERON:0010336 @@ -316525,7 +317425,6 @@ def: "Mesenchyme that develops_from a neural crest and is part of a mandibular p subset: human_subset subset: mouse_subset xref: EHDAA2:0004603 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0006905 ! mandibular process mesenchyme is_a: UBERON:0010258 ! mesenchyme from rhombencephalic neural crest intersection_of: UBERON:0003104 ! mesenchyme @@ -316533,7 +317432,7 @@ intersection_of: develops_from UBERON:0002342 ! neural crest intersection_of: part_of UBERON:0006905 ! mandibular process mesenchyme relationship: develops_from UBERON:0002342 ! neural crest relationship: develops_from UBERON:0010252 {source="EHDAA2"} ! 1st arch mandibular mesenchyme from neural crest -relationship: part_of UBERON:0006905 {source="EHDAA2"} ! mandibular process mesenchyme +relationship: part_of UBERON:0006905 ! mandibular process mesenchyme [Term] id: UBERON:0010337 @@ -316542,7 +317441,6 @@ def: "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part subset: human_subset subset: mouse_subset xref: EHDAA2:0004604 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0006904 ! head mesenchyme from mesoderm is_a: UBERON:0006905 ! mandibular process mesenchyme intersection_of: UBERON:0003104 ! mesenchyme @@ -316550,7 +317448,7 @@ intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0006905 ! mandibular process mesenchyme relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm relationship: develops_from UBERON:0010339 {source="EHDAA2"} ! 1st arch mandibular mesenchyme from head mesenchyme -relationship: part_of UBERON:0006905 {source="EHDAA2"} ! mandibular process mesenchyme +relationship: part_of UBERON:0006905 ! mandibular process mesenchyme [Term] id: UBERON:0010338 @@ -316565,8 +317463,8 @@ is_a: UBERON:0010341 ! 1st arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0010045 ! 1st arch maxillary mesenchyme -relationship: develops_from UBERON:0006904 {source="EHDAA2"} ! head mesenchyme from mesoderm -relationship: part_of UBERON:0010045 {source="EHDAA2"} ! 1st arch maxillary mesenchyme +relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm +relationship: part_of UBERON:0010045 ! 1st arch maxillary mesenchyme [Term] id: UBERON:0010339 @@ -316575,14 +317473,13 @@ def: "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part subset: human_subset subset: mouse_subset xref: EHDAA2:0000036 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0009584 ! 1st arch mandibular mesenchyme is_a: UBERON:0010341 ! 1st arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0009584 ! 1st arch mandibular mesenchyme -relationship: develops_from UBERON:0006904 {source="EHDAA2"} ! head mesenchyme from mesoderm -relationship: part_of UBERON:0009584 {source="EHDAA2"} ! 1st arch mandibular mesenchyme +relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm +relationship: part_of UBERON:0009584 ! 1st arch mandibular mesenchyme [Term] id: UBERON:0010341 @@ -316592,14 +317489,13 @@ subset: human_subset subset: mouse_subset synonym: "mesenchyme derived from head mesoderm of mesenchyme of 1st arch" EXACT [EMAPA:16130] xref: EMAPA:16130 -is_a: UBERON:0003104 {source="EHDAA2"} ! mesenchyme is_a: UBERON:0010042 ! 1st arch mesenchyme is_a: UBERON:0010360 ! pharyngeal arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0010042 ! 1st arch mesenchyme relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm -relationship: part_of UBERON:0010042 {source="EMAPA"} ! 1st arch mesenchyme +relationship: part_of UBERON:0010042 ! 1st arch mesenchyme [Term] id: UBERON:0010343 @@ -316619,8 +317515,8 @@ is_a: UBERON:0010360 ! pharyngeal arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0005689 ! 2nd arch mesenchyme -relationship: develops_from UBERON:0006904 {source="EHDAA2"} ! head mesenchyme from mesoderm -relationship: part_of UBERON:0005689 {source="EHDAA2"} ! 2nd arch mesenchyme +relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm +relationship: part_of UBERON:0005689 ! 2nd arch mesenchyme [Term] id: UBERON:0010344 @@ -316640,8 +317536,8 @@ is_a: UBERON:0010360 ! pharyngeal arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0005690 ! 3rd arch mesenchyme -relationship: develops_from UBERON:0006904 {source="EHDAA2"} ! head mesenchyme from mesoderm -relationship: part_of UBERON:0005690 {source="EHDAA2"} ! 3rd arch mesenchyme +relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm +relationship: part_of UBERON:0005690 ! 3rd arch mesenchyme [Term] id: UBERON:0010345 @@ -316661,8 +317557,8 @@ is_a: UBERON:0010360 ! pharyngeal arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0005691 ! 4th arch mesenchyme -relationship: develops_from UBERON:0006904 {source="EHDAA2"} ! head mesenchyme from mesoderm -relationship: part_of UBERON:0005691 {source="EHDAA2"} ! 4th arch mesenchyme +relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm +relationship: part_of UBERON:0005691 ! 4th arch mesenchyme [Term] id: UBERON:0010347 @@ -316680,8 +317576,8 @@ is_a: UBERON:0010360 ! pharyngeal arch mesenchyme from head mesenchyme intersection_of: UBERON:0003104 ! mesenchyme intersection_of: develops_from UBERON:0006904 ! head mesenchyme from mesoderm intersection_of: part_of UBERON:0010031 ! 6th arch mesenchyme -relationship: develops_from UBERON:0006904 {source="EHDAA2"} ! head mesenchyme from mesoderm -relationship: part_of UBERON:0010031 {source="EHDAA2"} ! 6th arch mesenchyme +relationship: develops_from UBERON:0006904 ! head mesenchyme from mesoderm +relationship: part_of UBERON:0010031 ! 6th arch mesenchyme [Term] id: UBERON:0010348 @@ -317837,7 +318733,7 @@ subset: human_subset subset: mouse_subset synonym: "lymphoid nodule of tonsil" RELATED [FMA:86018] xref: FMA:86018 -is_a: UBERON:0010422 {source="FMA"} ! primary nodular lymphoid tissue +is_a: UBERON:0010422 ! primary nodular lymphoid tissue intersection_of: UBERON:0010422 ! primary nodular lymphoid tissue intersection_of: part_of UBERON:0002372 ! tonsil relationship: part_of UBERON:0002372 ! tonsil @@ -318250,7 +319146,7 @@ xref: BTO:0000376 is_a: UBERON:0006869 ! electric organ intersection_of: UBERON:0006869 ! electric organ intersection_of: part_of UBERON:0002415 ! tail -relationship: part_of UBERON:0002415 {source="BTO"} ! tail +relationship: part_of UBERON:0002415 ! tail [Term] id: UBERON:0010520 @@ -318270,10 +319166,10 @@ subset: human_subset subset: mouse_subset synonym: "electric sense organ" EXACT [] synonym: "electroreception organ" EXACT [] -is_a: UBERON:0000020 ! sense organ +is_a: UBERON:0000062 ! organ intersection_of: UBERON:0000062 ! organ -intersection_of: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception -relationship: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception +intersection_of: capable_of GO:0050956 ! electroception +relationship: capable_of GO:0050956 ! electroception [Term] id: UBERON:0010522 @@ -318424,7 +319320,7 @@ is_a: UBERON:0004120 ! mesoderm-derived structure intersection_of: UBERON:0001225 ! cortex of kidney intersection_of: part_of UBERON:0000081 ! metanephros relationship: develops_from UBERON:0005113 ! metanephric cortex mesenchyme -relationship: part_of UBERON:0000081 {source="VHOG"} ! metanephros +relationship: part_of UBERON:0000081 ! metanephros [Term] id: UBERON:0010534 @@ -322402,7 +323298,7 @@ is_a: UBERON:0003933 {source="ZFA"} ! cranial cartilage intersection_of: UBERON:0007844 ! cartilage element intersection_of: part_of UBERON:0008895 ! splanchnocranium relationship: develops_from UBERON:0002539 ! pharyngeal arch -relationship: part_of UBERON:0008895 {source="ZFA"} ! splanchnocranium +relationship: part_of UBERON:0008895 ! splanchnocranium [Term] id: UBERON:0011005 @@ -325487,7 +326383,7 @@ synonym: "pharyngeal aponeurosis" RELATED [Wikipedia:Pharyngobasilar_fascia] xref: FMA:55074 xref: SCTID:16675008 xref: Wikipedia:Pharyngobasilar_fascia -is_a: UBERON:0006614 {source="FMA"} ! aponeurosis +is_a: UBERON:0006614 ! aponeurosis intersection_of: UBERON:0006614 ! aponeurosis intersection_of: part_of UBERON:0001042 ! chordate pharynx relationship: part_of UBERON:0001042 ! chordate pharynx @@ -326296,7 +327192,7 @@ intersection_of: UBERON:0014892 ! skeletal muscle organ, vertebrate intersection_of: has_muscle_insertion UBERON:0001676 ! occipital bone intersection_of: has_muscle_insertion UBERON:0011220 ! mastoid process of temporal bone intersection_of: has_muscle_origin UBERON:0002208 ! sternebra -relationship: has_muscle_insertion UBERON:0001676 {notes="nuchal crest"} ! occipital bone +relationship: has_muscle_insertion UBERON:0001676 ! occipital bone relationship: has_muscle_insertion UBERON:0011220 ! mastoid process of temporal bone relationship: has_muscle_origin UBERON:0002208 ! sternebra @@ -329285,7 +330181,7 @@ xref: FMA:20109 xref: NCIT:C32882 xref: UMLS:C0738366 {source="ncithesaurus:Irregular_Dense_Connective_Tissue"} xref: Wikipedia:Dense_irregular_connective_tissue -is_a: UBERON:0011821 {source="FMA"} ! irregular connective tissue +is_a: UBERON:0011821 ! irregular connective tissue is_a: UBERON:0011823 ! dense connective tissue intersection_of: UBERON:0011821 ! irregular connective tissue intersection_of: composed_primarily_of UBERON:0011860 ! collection of collagen fibrils @@ -331642,8 +332538,6 @@ relationship: in_taxon NCBITaxon:8782 ! Aves id: UBERON:0012101 name: perinatal stage def: "The period spanning the range immediately before and after birth." [http://orcid.org/0000-0002-6601-2165] -subset: human_subset -subset: mouse_subset synonym: "paranatal stage" NARROW [] is_a: UBERON:0000105 ! life cycle stage relationship: overlaps UBERON:0000068 ! embryo stage @@ -335711,7 +336605,6 @@ xref: MA:0003210 xref: MA:0003211 xref: SCTID:37457002 is_a: UBERON:0001210 ! muscularis mucosae of small intestine -is_a: UBERON:0006676 {source="FMA"} ! muscularis mucosa intersection_of: UBERON:0006676 ! muscularis mucosa intersection_of: part_of UBERON:0002114 ! duodenum relationship: part_of UBERON:0000320 {source="FMA"} ! duodenal mucosa @@ -337784,7 +338677,7 @@ xref: EMAPA:29252 is_a: UBERON:0013238 ! future glans intersection_of: UBERON:0013238 ! future glans intersection_of: part_of UBERON:0006261 ! male genital tubercle -relationship: part_of UBERON:0006261 {source="EMAPA"} ! male genital tubercle +relationship: part_of UBERON:0006261 ! male genital tubercle [Term] id: UBERON:0013240 @@ -337797,7 +338690,7 @@ xref: EMAPA:19170 is_a: UBERON:0013238 ! future glans intersection_of: UBERON:0013238 ! future glans intersection_of: part_of UBERON:0006233 ! female genital tubercle -relationship: part_of UBERON:0006233 {source="EMAPA"} ! female genital tubercle +relationship: part_of UBERON:0006233 ! female genital tubercle [Term] id: UBERON:0013241 @@ -337854,8 +338747,8 @@ is_a: UBERON:0012275 ! meso-epithelium intersection_of: UBERON:0003914 ! epithelial tube intersection_of: develops_from UBERON:0003890 ! Mullerian duct intersection_of: part_of UBERON:0000079 ! male reproductive system -relationship: develops_from UBERON:0003890 {source="EHDAA2"} ! Mullerian duct -relationship: part_of UBERON:0000079 {source="EHDAA2"} ! male reproductive system +relationship: develops_from UBERON:0003890 ! Mullerian duct +relationship: part_of UBERON:0000079 ! male reproductive system property_value: editor_note "consider separating the duct from the degenerating portion, as in EMAPA" xsd:string [Term] @@ -339119,11 +340012,9 @@ synonym: "median pseudovaginal canal" EXACT [] synonym: "median vagina" EXACT [] synonym: "midline birth canal" RELATED [] is_a: UBERON:0000996 ! vagina -is_a: UBERON:0004111 ! anatomical conduit intersection_of: UBERON:0000996 ! vagina intersection_of: connected_to UBERON:0013523 ! lateral vaginal canal intersection_of: intersects_midsagittal_plane_of UBERON:0003975 ! internal female genitalia -relationship: channel_for UBERON:0000922 ! embryo relationship: connected_to UBERON:0013523 ! lateral vaginal canal relationship: in_taxon NCBITaxon:9263 {editor="cjm"} ! Metatheria relationship: intersects_midsagittal_plane_of UBERON:0003975 ! internal female genitalia @@ -344310,9 +345201,10 @@ xref: BIRNLEX:1395 xref: FMA:321588 xref: SCTID:71118002 xref: UMLS:C0228637 {source="BIRNLEX:1395"} -is_a: UBERON:0014538 {source="NIFSTD"} ! subdivision of spinal cord central canal +is_a: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: subdivision_of UBERON:0003038 ! thoracic spinal cord +relationship: part_of UBERON:0003038 ! thoracic spinal cord relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: subdivision_of UBERON:0003038 ! thoracic spinal cord @@ -344327,9 +345219,10 @@ xref: BIRNLEX:1511 xref: FMA:321590 xref: SCTID:280403009 xref: UMLS:C0228620 {source="BIRNLEX:1511"} -is_a: UBERON:0014538 {source="NIFSTD"} ! subdivision of spinal cord central canal +is_a: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: subdivision_of UBERON:0002726 ! cervical spinal cord +relationship: part_of UBERON:0002726 ! cervical spinal cord relationship: subdivision_of UBERON:0002726 ! cervical spinal cord [Term] @@ -344344,9 +345237,10 @@ xref: BIRNLEX:1604 xref: FMA:321589 xref: SCTID:280406001 xref: UMLS:C0228644 {source="BIRNLEX:1604"} -is_a: UBERON:0014538 {source="NIFSTD"} ! subdivision of spinal cord central canal +is_a: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: subdivision_of UBERON:0002792 ! lumbar spinal cord +relationship: part_of UBERON:0002792 ! lumbar spinal cord relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: subdivision_of UBERON:0002792 ! lumbar spinal cord @@ -344385,6 +345279,7 @@ xref: SCTID:362450003 is_a: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: UBERON:0014538 ! subdivision of spinal cord central canal intersection_of: subdivision_of UBERON:0005843 ! sacral spinal cord +relationship: part_of UBERON:0005843 ! sacral spinal cord relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens relationship: subdivision_of UBERON:0005843 ! sacral spinal cord @@ -348094,7 +348989,7 @@ relationship: part_of UBERON:0002298 ! brainstem [Term] id: UBERON:0014892 name: skeletal muscle organ, vertebrate -def: "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." [GOC:dos] +def: "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles)." [https://orcid.org/0000-0002-7073-9172] subset: human_reference_atlas subset: human_subset subset: mouse_subset @@ -348136,7 +349031,7 @@ relationship: synapsed_by CL:0000100 ! motor neuron [Term] id: UBERON:0014895 name: somatic muscle, invertebrate -def: "A muscle structure of invertebrates whose origin and insertion sites are in basal side of the epidermis or structures derived from it. The simplest somatic muscles consist of a single cell and associated extracellular structures." [GOC:DOS] +def: "A muscle structure of invertebrates whose origin and insertion sites are in basal side of the epidermis or structures derived from it. The simplest somatic muscles consist of a single cell and associated extracellular structures." [https://orcid.org/0000-0002-7073-9172] synonym: "skeletal muscle" RELATED [FBbt:00005073] xref: HAO:0001922 is_a: UBERON:0005090 ! muscle structure @@ -348150,7 +349045,7 @@ property_value: external_definition "The muscle that is attached at either end t [Term] id: UBERON:0014896 name: transversely striated somatic muscle -def: "A somatic muscle that consists of one or more somatic muscle myotubes and any associated extracellular structures." [GOC:DOS] +def: "A somatic muscle that consists of one or more somatic muscle myotubes and any associated extracellular structures." [https://orcid.org/0000-0002-7073-9172] is_a: UBERON:0014895 ! somatic muscle, invertebrate intersection_of: UBERON:0014895 ! somatic muscle, invertebrate intersection_of: composed_primarily_of CL:0008003 ! somatic muscle myotube @@ -348159,7 +349054,7 @@ relationship: composed_primarily_of CL:0008003 ! somatic muscle myotube [Term] id: UBERON:0014897 name: obliquely striated somatic muscle -def: "A somatic muscle that consists of one or more obliquely striated muscle cells and any associated extracellular structures." [GOC:DOS] +def: "A somatic muscle that consists of one or more obliquely striated muscle cells and any associated extracellular structures." [https://orcid.org/0000-0002-7073-9172] is_a: UBERON:0014895 ! somatic muscle, invertebrate intersection_of: UBERON:0014895 ! somatic muscle, invertebrate intersection_of: composed_primarily_of CL:0008005 ! obliquely striated somatic muscle cell @@ -350874,7 +351769,7 @@ property_value: taxon_notes "Caecilians posses a lymph heart at every segment bo [Term] id: UBERON:0015203 name: non-connected functional system -def: "An anatomical group whose component structures share a common function." [AEO:0000093, AEO:JB, FBbt:00007278, FBC:DOS] +def: "An anatomical group whose component structures share a common function." [AEO:0000093, AEO:JB, FBbt:00007278, https://orcid.org/0000-0002-7073-9172] subset: human_subset subset: mouse_subset xref: AEO:0000093 @@ -351669,7 +352564,7 @@ is_a: UBERON:0015796 ! liver blood vessel intersection_of: UBERON:0001193 ! hepatic artery intersection_of: part_of UBERON:0001115 ! left lobe of liver relationship: connected_to UBERON:0015480 ! proper hepatic artery -relationship: part_of UBERON:0001115 {source="FMA"} ! left lobe of liver +relationship: part_of UBERON:0001115 ! left lobe of liver relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -351690,7 +352585,7 @@ is_a: UBERON:0015796 ! liver blood vessel intersection_of: UBERON:0001193 ! hepatic artery intersection_of: part_of UBERON:0001114 ! right lobe of liver relationship: connected_to UBERON:0015480 ! proper hepatic artery -relationship: part_of UBERON:0001114 {source="FMA"} ! right lobe of liver +relationship: part_of UBERON:0001114 ! right lobe of liver relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -352239,7 +353134,7 @@ subset: human_subset subset: mouse_subset xref: EMAPA:35957 xref: MA:0003162 -is_a: UBERON:0007625 ! pigment epithelium of eye +is_a: UBERON:0019304 ! sensory organ epithelium intersection_of: UBERON:0000483 ! epithelium intersection_of: part_of UBERON:0000019 ! camera-type eye relationship: part_of UBERON:0000019 ! camera-type eye @@ -357517,7 +358412,7 @@ synonym: "montreme beak" RELATED [] synonym: "platypus beak" RELATED [] synonym: "platypus bill" NARROW [] is_a: UBERON:0006333 ! snout -relationship: capable_of GO:0050964 {gci_filler="NCBITaxon:9257", gci_relation="part_of"} ! detection of electrical stimulus involved in electroception +relationship: capable_of GO:0050956 {gci_filler="NCBITaxon:9257", gci_relation="part_of"} ! electroception relationship: in_taxon NCBITaxon:9255 ! Monotremata [Term] @@ -358139,8 +359034,6 @@ property_value: taxon_notes "In humans, the platysma has features of the pannicu id: UBERON:0018241 name: prime adult stage def: "A life cycle stage that starts at completion of development and growth of the sexually mature adult animal, and ends before senescence." [Bgee:AN, https://github.com/obophenotype/uberon/issues/496] -subset: human_subset -subset: mouse_subset synonym: "adulthood stage" RELATED [] xref: AcarDv:0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: BtauDv:0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -361338,8 +362231,6 @@ is_a: UBERON:0003715 {source="FMA"} ! splanchnic nerve id: UBERON:0018685 name: nursing stage def: "A mammalian developmental stage that covers the period from birth until weaning." [Bgee:AN] -subset: human_subset -subset: mouse_subset synonym: "suckling stage" EXACT [] xref: ChirDv:0000016 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: GgorDv:0000004 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -362438,7 +363329,7 @@ property_value: location_notes "part of surface lipid layer of tear film" xsd:st [Term] id: UBERON:0019319 name: exocrine gland of integumental system -def: "An exocrine gland that is part of a integumental system." [GOC:dos, http://orcid.org/0000-0002-6601-2165] +def: "An exocrine gland that is part of a integumental system." [http://orcid.org/0000-0002-6601-2165, https://orcid.org/0000-0002-7073-9172] subset: human_subset subset: mouse_subset synonym: "integumental exocrine gland" EXACT [http://orcid.org/0000-0002-6601-2165] @@ -363342,7 +364233,7 @@ is_a: UBERON:0010199 {source="CARO"} ! bona-fide anatomical boundary [Term] id: UBERON:0022295 name: integumental surface -def: "The outer surface of an organism or its integumental system." [CARO:DOS] +def: "The outer surface of an organism or its integumental system." [https://orcid.org/0000-0002-7073-9172] subset: human_subset subset: mouse_subset is_a: UBERON:0022294 ! morphological boundary @@ -370603,7 +371494,7 @@ xref: AAO:0000397 is_a: UBERON:0004103 ! alveolar ridge intersection_of: UBERON:0004103 ! alveolar ridge intersection_of: part_of UBERON:0002244 ! premaxilla -relationship: part_of UBERON:0002244 {source="AAO"} ! premaxilla +relationship: part_of UBERON:0002244 ! premaxilla [Term] id: UBERON:0034900 @@ -370760,8 +371651,6 @@ property_value: editor_note "consider merging with olivary; however, Butler and id: UBERON:0034919 name: juvenile stage def: "The stage of being no more dependent of the nest and/or from caregivers for subsistence while having not reach sexual maturity." [Bgee:AN, https://github.com/obophenotype/uberon/issues/645] -subset: human_subset -subset: mouse_subset xref: ChirDv:0000034 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: GgalDv:0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: GgorDv:0000005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -370785,8 +371674,6 @@ relationship: preceded_by UBERON:0007221 {gci_relation="part_of", gci_filler="NC id: UBERON:0034920 name: infant stage def: "Nursing stage that follows the neonate stage in mammals and ends at weaning." [Bgee:AN, https://github.com/obophenotype/uberon/issues/644] -subset: human_subset -subset: mouse_subset xref: ChirDv:0000022 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: HsapDv:0000261 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} xref: MdomDv:0000033 {sssom:mapping_justification="https://w3id.org/semapv/vocab/UnspecifiedMatching"} @@ -372334,7 +373221,7 @@ synonym: "M. caudofemoralis brevis" EXACT [] is_a: UBERON:0013221 ! caudofemoralis intersection_of: UBERON:0013221 ! caudofemoralis intersection_of: attaches_to UBERON:0001273 ! ilium -relationship: attaches_to UBERON:0001273 {notes="fossa on lower edge of ilium"} ! ilium +relationship: attaches_to UBERON:0001273 ! ilium relationship: present_in_taxon NCBITaxon:28376 ! Anolis property_value: taxon_notes "In Anolis, This muscle mostly originates via fleshy fibers from the ventrolateral aspect of the ilium and the ventral aspect of the transverse processes of Ca1-8 (note: the origin from Ca1 is tendinous). The fibers of m. ischiocaudalis join those of m. cocygeus inferior in the ventral midline at the level of Ca3-4 (in females) and Ca5-6 (in males)[PMID:22753107]" xsd:string @@ -375263,9 +376150,9 @@ id: UBERON:0035555 name: lateral line sense organ is_a: UBERON:0010521 ! electroreceptor organ intersection_of: UBERON:0000062 ! organ -intersection_of: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception +intersection_of: capable_of GO:0050956 ! electroception intersection_of: part_of UBERON:0002540 ! lateral line system -relationship: capable_of GO:0050964 ! detection of electrical stimulus involved in electroception +relationship: capable_of GO:0050956 ! electroception relationship: innervated_by UBERON:0008906 ! lateral line nerve relationship: part_of UBERON:0002540 ! lateral line system property_value: editor_note "ensure pit organ classifies here" xsd:string @@ -377852,10 +378739,8 @@ id: UBERON:0035943 name: life cycle temporal boundary def: "A temporal boundary connecting two life cycle stages that follow in immediate succession. A temporal boundary is an abstract, instantaneous entity." [https://orcid.org/0000-0002-6601-2165] subset: common_anatomy -subset: human_subset -subset: mouse_subset subset: upper_level -is_a: UBERON:0000000 ! processual entity +is_a: BFO:0000001 ! entity relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae relationship: present_in_taxon NCBITaxon:33208 ! Metazoa relationship: present_in_taxon NCBITaxon:4751 ! Fungi @@ -377865,13 +378750,12 @@ id: UBERON:0035944 name: life-death temporal boundary def: "A life cycle temporal boundary that marks the end of the life cycle of the organism." [https://github.com/obophenotype/uberon/issues/1172, https://orcid.org/0000-0002-6601-2165] subset: common_anatomy -subset: human_subset -subset: mouse_subset synonym: "death" RELATED INCONSISTENT [] synonym: "end of life" RELATED [] synonym: "end of life cycle" EXACT [] synonym: "moment of death" EXACT [] synonym: "time of death" EXACT [] +is_a: BFO:0000003 ! occurrent is_a: UBERON:0035943 ! life cycle temporal boundary intersection_of: UBERON:0035943 ! life cycle temporal boundary intersection_of: ends UBERON:0000104 ! life cycle @@ -377886,8 +378770,7 @@ id: UBERON:0035945 name: start of life cycle def: "A life cycle temporal boundary that marks the start of the life cycle of the organism." [https://github.com/obophenotype/uberon/issues/1172, https://orcid.org/0000-0002-6601-2165] subset: common_anatomy -subset: human_subset -subset: mouse_subset +is_a: BFO:0000003 ! occurrent is_a: UBERON:0035943 ! life cycle temporal boundary intersection_of: UBERON:0035943 ! life cycle temporal boundary intersection_of: starts UBERON:0000104 ! life cycle @@ -377901,11 +378784,10 @@ relationship: starts UBERON:0000104 ! life cycle id: UBERON:0035946 name: start of neonate stage def: "A life cycle temporal boundary that marks the start of the neonate stage of the organism." [https://github.com/obophenotype/uberon/issues/1204, https://orcid.org/0000-0002-6601-2165] -subset: human_subset -subset: mouse_subset synonym: "birth" RELATED INCONSISTENT [] synonym: "moment of birth" EXACT [] synonym: "time of birth" EXACT [] +is_a: BFO:0000003 ! occurrent is_a: UBERON:0035943 ! life cycle temporal boundary intersection_of: UBERON:0035943 ! life cycle temporal boundary intersection_of: starts UBERON:0007221 ! neonate stage @@ -377924,7 +378806,7 @@ consider: UBERON:0001893 [Term] id: UBERON:0035956 name: epididymal lumen -def: "The lumen of the epididymis." [GOC:DOS, https://github.com/obophenotype/uberon/issues/1209] +def: "The lumen of the epididymis." [https://github.com/obophenotype/uberon/issues/1209, https://orcid.org/0000-0002-7073-9172] subset: human_subset subset: mouse_subset synonym: "epididymis lumen" EXACT [FMA:18274] @@ -379061,7 +379943,7 @@ subset: human_subset subset: mouse_subset xref: AAO:0010270 xref: ZFA:0005594 -is_a: UBERON:0000465 ! material anatomical entity +is_a: UBERON:0000001 ! gross anatomical part relationship: bounding_layer_of UBERON:0000061 ! anatomical structure relationship: part_of UBERON:0000061 ! anatomical structure relationship: present_in_taxon NCBITaxon:33090 ! Viridiplantae @@ -379536,10 +380418,10 @@ subset: human_subset subset: mouse_subset synonym: "left ventricular wall" EXACT [FMA:9556] xref: FMA:9556 -is_a: UBERON:0004784 {source="FMA"} ! heart ventricle wall +is_a: UBERON:0004784 ! heart ventricle wall intersection_of: UBERON:0004784 ! heart ventricle wall intersection_of: part_of UBERON:0002084 ! heart left ventricle -relationship: part_of UBERON:0002084 {source="FMA"} ! heart left ventricle +relationship: part_of UBERON:0002084 ! heart left ventricle [Term] id: UBERON:0036286 @@ -379549,10 +380431,10 @@ subset: human_subset subset: mouse_subset synonym: "right ventricular wall" EXACT [FMA:9533] xref: FMA:9533 -is_a: UBERON:0004784 {source="FMA"} ! heart ventricle wall +is_a: UBERON:0004784 ! heart ventricle wall intersection_of: UBERON:0004784 ! heart ventricle wall intersection_of: part_of UBERON:0002080 ! heart right ventricle -relationship: part_of UBERON:0002080 {source="FMA"} ! heart right ventricle +relationship: part_of UBERON:0002080 ! heart right ventricle [Term] id: UBERON:0036288 @@ -379730,7 +380612,7 @@ is_a: UBERON:0000415 {source="FMA"} ! artery wall is_a: UBERON:0037144 ! wall of heart intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001621 ! coronary artery -relationship: part_of UBERON:0001621 {source="FMA"} ! coronary artery +relationship: part_of UBERON:0001621 ! coronary artery [Term] id: UBERON:0036337 @@ -379740,11 +380622,10 @@ subset: mouse_subset synonym: "appendix wall" EXACT [FMA:14621] synonym: "wall of vermiform appendix" EXACT [FMA:14621] xref: FMA:14621 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall is_a: UBERON:0001169 ! wall of large intestine intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001154 ! vermiform appendix -relationship: part_of UBERON:0001154 {source="FMA"} ! vermiform appendix +relationship: part_of UBERON:0001154 ! vermiform appendix relationship: part_of UBERON:0001169 {source="FMA"} ! wall of large intestine [Term] @@ -379754,11 +380635,10 @@ subset: human_subset subset: mouse_subset synonym: "gallbladder wall" EXACT [FMA:14657] xref: FMA:14657 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall is_a: UBERON:0003697 ! abdominal wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002110 ! gallbladder -relationship: part_of UBERON:0002110 {source="FMA"} ! gallbladder +relationship: part_of UBERON:0002110 ! gallbladder [Term] id: UBERON:0036351 @@ -379770,7 +380650,7 @@ xref: FMA:15089 is_a: UBERON:0000415 {source="FMA"} ! artery wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001529 ! brachiocephalic artery -relationship: part_of UBERON:0001529 {source="FMA"} ! brachiocephalic artery +relationship: part_of UBERON:0001529 ! brachiocephalic artery [Term] id: UBERON:0036352 @@ -379782,7 +380662,7 @@ xref: FMA:15090 is_a: UBERON:0000415 {source="FMA"} ! artery wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001533 ! subclavian artery -relationship: part_of UBERON:0001533 {source="FMA"} ! subclavian artery +relationship: part_of UBERON:0001533 ! subclavian artery [Term] id: UBERON:0036362 @@ -379791,13 +380671,12 @@ subset: human_subset subset: mouse_subset synonym: "anal canal wall" EXACT [FMA:15704] xref: FMA:15704 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall is_a: UBERON:0001169 ! wall of large intestine intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000159 ! anal canal intersection_of: part_of UBERON:0001007 ! digestive system -relationship: part_of UBERON:0000159 {source="FMA"} ! anal canal -relationship: part_of UBERON:0001007 {source="FMA"} ! digestive system +relationship: part_of UBERON:0000159 ! anal canal +relationship: part_of UBERON:0001007 ! digestive system [Term] id: UBERON:0036375 @@ -379809,7 +380688,7 @@ xref: FMA:15889 is_a: UBERON:0009916 {source="FMA"} ! wall of ureter intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001222 ! right ureter -relationship: part_of UBERON:0001222 {source="FMA"} ! right ureter +relationship: part_of UBERON:0001222 ! right ureter [Term] id: UBERON:0036376 @@ -379822,7 +380701,7 @@ xref: FMA:15890 is_a: UBERON:0009916 {source="FMA"} ! wall of ureter intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001223 ! left ureter -relationship: part_of UBERON:0001223 {source="FMA"} ! left ureter +relationship: part_of UBERON:0001223 ! left ureter relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens [Term] @@ -379835,7 +380714,7 @@ xref: FMA:18211 is_a: UBERON:0000415 {source="FMA"} ! artery wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002012 ! pulmonary artery -relationship: part_of UBERON:0002012 {source="FMA"} ! pulmonary artery +relationship: part_of UBERON:0002012 ! pulmonary artery [Term] id: UBERON:0036441 @@ -379846,11 +380725,11 @@ synonym: "uterine tube wall" EXACT [FMA:18303] synonym: "wall of oviduct" EXACT [FMA:18303] synonym: "wall of uterine tube" EXACT [] xref: FMA:18303 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0005156 ! reproductive structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0003889 ! fallopian tube -relationship: part_of UBERON:0003889 {source="FMA"} ! fallopian tube +relationship: part_of UBERON:0003889 ! fallopian tube [Term] id: UBERON:0036521 @@ -379859,10 +380738,10 @@ subset: human_subset subset: mouse_subset synonym: "urethral wall" EXACT [FMA:19779] xref: FMA:19779 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000057 ! urethra -relationship: part_of UBERON:0000057 {source="FMA"} ! urethra +relationship: part_of UBERON:0000057 ! urethra [Term] id: UBERON:0036523 @@ -379871,11 +380750,11 @@ subset: human_subset subset: mouse_subset synonym: "vaginal wall" EXACT [FMA:19971] xref: FMA:19971 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0005156 ! reproductive structure intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000996 ! vagina -relationship: part_of UBERON:0000996 {source="FMA"} ! vagina +relationship: part_of UBERON:0000996 ! vagina [Term] id: UBERON:0036553 @@ -379887,7 +380766,7 @@ is_a: UBERON:0000042 {source="FMA"} ! serous membrane is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000304 ! tendon sheath -relationship: part_of UBERON:0000304 {source="FMA"} ! tendon sheath +relationship: part_of UBERON:0000304 ! tendon sheath [Term] id: UBERON:0036654 @@ -379899,7 +380778,7 @@ is_a: UBERON:0005358 {source="FMA"} ! ventricle of nervous system is_a: UBERON:0036661 ! wall of ventricular system of brain intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002285 ! telencephalic ventricle -relationship: part_of UBERON:0002285 {source="FMA"} ! telencephalic ventricle +relationship: part_of UBERON:0002285 ! telencephalic ventricle [Term] id: UBERON:0036655 @@ -379911,7 +380790,7 @@ is_a: UBERON:0005358 {source="FMA"} ! ventricle of nervous system is_a: UBERON:0036661 ! wall of ventricular system of brain intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002289 ! midbrain cerebral aqueduct -relationship: part_of UBERON:0002289 {source="FMA"} ! midbrain cerebral aqueduct +relationship: part_of UBERON:0002289 ! midbrain cerebral aqueduct [Term] id: UBERON:0036656 @@ -379923,7 +380802,7 @@ is_a: UBERON:0005358 {source="FMA"} ! ventricle of nervous system is_a: UBERON:0036661 ! wall of ventricular system of brain intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002286 ! third ventricle -relationship: part_of UBERON:0002286 {source="FMA"} ! third ventricle +relationship: part_of UBERON:0002286 ! third ventricle [Term] id: UBERON:0036657 @@ -379935,7 +380814,7 @@ is_a: UBERON:0005358 {source="FMA"} ! ventricle of nervous system is_a: UBERON:0036661 ! wall of ventricular system of brain intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002422 ! fourth ventricle -relationship: part_of UBERON:0002422 {source="FMA"} ! fourth ventricle +relationship: part_of UBERON:0002422 ! fourth ventricle [Term] id: UBERON:0036658 @@ -379948,7 +380827,7 @@ is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0005358 {source="FMA"} ! ventricle of nervous system intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002291 ! central canal of spinal cord -relationship: part_of UBERON:0002291 {source="FMA"} ! central canal of spinal cord +relationship: part_of UBERON:0002291 ! central canal of spinal cord [Term] id: UBERON:0036661 @@ -379960,7 +380839,7 @@ is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0005358 {source="FMA"} ! ventricle of nervous system intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0005282 ! ventricular system of brain -relationship: part_of UBERON:0005282 {source="FMA"} ! ventricular system of brain +relationship: part_of UBERON:0005282 ! ventricular system of brain [Term] id: UBERON:0036925 @@ -379969,10 +380848,10 @@ subset: human_subset subset: mouse_subset synonym: "eyeball wall" EXACT [FMA:58098] xref: FMA:58098 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0010230 ! eyeball of camera-type eye -relationship: part_of UBERON:0010230 {source="FMA"} ! eyeball of camera-type eye +relationship: part_of UBERON:0010230 ! eyeball of camera-type eye [Term] id: UBERON:0036990 @@ -379981,10 +380860,10 @@ subset: human_subset subset: mouse_subset synonym: "pharyngotympanic tube wall" EXACT [FMA:60069] xref: FMA:60069 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0002393 ! pharyngotympanic tube -relationship: part_of UBERON:0002393 {source="FMA"} ! pharyngotympanic tube +relationship: part_of UBERON:0002393 ! pharyngotympanic tube [Term] id: UBERON:0037089 @@ -379997,7 +380876,7 @@ is_a: UBERON:0000060 ! anatomical wall is_a: UBERON:0000075 {source="FMA"} ! subdivision of skeletal system intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001697 ! orbit of skull -relationship: part_of UBERON:0001697 {source="FMA"} ! orbit of skull +relationship: part_of UBERON:0001697 ! orbit of skull [Term] id: UBERON:0037094 @@ -380009,7 +380888,7 @@ xref: FMA:66284 is_a: UBERON:0000415 {source="FMA"} ! artery wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001530 ! common carotid artery plus branches -relationship: part_of UBERON:0001530 {source="FMA"} ! common carotid artery plus branches +relationship: part_of UBERON:0001530 ! common carotid artery plus branches [Term] id: UBERON:0037144 @@ -380019,13 +380898,13 @@ subset: human_subset subset: mouse_subset synonym: "cardiac wall" EXACT [FMA:7274] xref: FMA:7274 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0000948 ! heart relationship: attaches_to UBERON:0002406 {source="FMA"} ! pericardial sac relationship: attaches_to UBERON:0004292 {source="FMA"} ! cardiac skeleton relationship: part_of RO:0002577 ! system -relationship: part_of UBERON:0000948 {source="FMA"} ! heart +relationship: part_of UBERON:0000948 ! heart [Term] id: UBERON:0037191 @@ -380034,10 +380913,10 @@ subset: human_subset subset: mouse_subset synonym: "membranous labyrinth wall" EXACT [FMA:79837] xref: FMA:79837 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001849 ! membranous labyrinth -relationship: part_of UBERON:0001849 {source="FMA"} ! membranous labyrinth +relationship: part_of UBERON:0001849 ! membranous labyrinth [Term] id: UBERON:0037237 @@ -380046,10 +380925,10 @@ subset: human_subset subset: mouse_subset synonym: "lacrimal ductal wall" EXACT [FMA:85375] xref: FMA:85375 -is_a: UBERON:0000060 {source="FMA"} ! anatomical wall +is_a: UBERON:0000060 ! anatomical wall intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001850 ! lacrimal drainage system -relationship: part_of UBERON:0001850 {source="FMA"} ! lacrimal drainage system +relationship: part_of UBERON:0001850 ! lacrimal drainage system [Term] id: UBERON:0037447 @@ -380061,7 +380940,7 @@ xref: FMA:19676 is_a: UBERON:0036521 {source="FMA"} ! wall of urethra intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001333 ! male urethra -relationship: part_of UBERON:0001333 {source="FMA"} ! male urethra +relationship: part_of UBERON:0001333 ! male urethra [Term] id: UBERON:0037455 @@ -380073,7 +380952,7 @@ xref: FMA:19780 is_a: UBERON:0036521 {source="FMA"} ! wall of urethra intersection_of: UBERON:0000060 ! anatomical wall intersection_of: part_of UBERON:0001334 ! female urethra -relationship: part_of UBERON:0001334 {source="FMA"} ! female urethra +relationship: part_of UBERON:0001334 ! female urethra [Term] id: UBERON:0037458 @@ -381651,965 +382530,4664 @@ name: subarachnoid space of brain subset: human_subset subset: mouse_subset xref: FMA:322073 -is_a: UBERON:0000315 {source="FMA"} ! subarachnoid space +is_a: UBERON:0000315 ! subarachnoid space intersection_of: UBERON:0000315 ! subarachnoid space intersection_of: part_of UBERON:0000955 ! brain relationship: part_of UBERON:0000955 ! brain [Term] -id: UBERON:0039176 -name: subarachnoid space of spinal cord +id: UBERON:0039176 +name: subarachnoid space of spinal cord +subset: human_subset +subset: mouse_subset +xref: FMA:322074 +is_a: UBERON:0000315 ! subarachnoid space +intersection_of: UBERON:0000315 ! subarachnoid space +intersection_of: part_of UBERON:0002240 ! spinal cord +relationship: part_of UBERON:0002240 ! spinal cord + +[Term] +id: UBERON:0039185 +name: accessory vertebral vein +def: "A lower continuation of the vertebral vein and vertebral venous plexus that passes through the foramen of the transverse process of the 7th cervical vertebra and empties into the brachiocephalic vein." [https://www.imaios.com/en/e-Anatomy/Anatomical-Parts/Accessory-vertebral-vein] +subset: human_subset +subset: mouse_subset +xref: FMA:14290 +is_a: UBERON:0001638 ! vein +relationship: part_of UBERON:0001588 ! vertebral vein +relationship: tributary_of UBERON:0003711 {source="FMA"} ! brachiocephalic vein + +[Term] +id: UBERON:0039186 +name: anterior vertebral vein +def: "A vein that commences in a plexus around the transverse processes of the upper cervical vertebræ, descends in company with the ascending cervical artery between the Scalenus anterior and Longus capitis muscles, and opens into the terminal part of the vertebral vein." [https://www.imaios.com/en/e-Anatomy/Anatomical-Parts/Anterior-vertebral-vein] +subset: human_subset +subset: mouse_subset +xref: FMA:14296 +is_a: UBERON:0001638 ! vein +relationship: part_of UBERON:0001588 ! vertebral vein +relationship: tributary_of UBERON:0001588 ! vertebral vein + +[Term] +id: UBERON:0039187 +name: suprascapular vein +def: "The suprascapular vein is a vein running above the scapula. It empties into the external jugular vein." [https://en.wikipedia.org/wiki/Suprascapular_vei] +subset: human_subset +subset: mouse_subset +xref: FMA:14319 +is_a: UBERON:0001638 ! vein +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0001101 {source="FMA"} ! external jugular vein + +[Term] +id: UBERON:0039188 +name: superior laryngeal vein +def: "The superior laryngeal vein is a vein which drains the larynx into the superior thyroid vein." [https://en.wikipedia.org/wiki/Superior_laryngeal_vein] +subset: human_subset +subset: mouse_subset +xref: FMA:14324 +is_a: UBERON:0001638 ! vein +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0007157 {source="FMA"} ! superior thyroid vein + +[Term] +id: UBERON:0039215 +name: appendicular artery +def: "An artery that commonly arises from the terminal branch of the ileocolic artery, or less commonly from the posterior cecal artery or an ileal artery.[1][2] It descends behind the termination of the ileum and enters the mesoappendix of the vermiform appendix. It runs near the free margin of the mesoappendix and ends in branches which supply the appendix." [https://en.wikipedia.org/wiki/Appendicular_artery] +subset: human_subset +subset: mouse_subset +synonym: "appendiceal artery" EXACT [FMA:14818] +xref: FMA:14818 +is_a: UBERON:0001637 ! artery +relationship: connecting_branch_of UBERON:0001197 ! ileocolic artery +relationship: part_of RO:0002577 ! system +relationship: vessel_supplies_blood_to UBERON:0001154 {source="FMA"} ! vermiform appendix + +[Term] +id: UBERON:0039222 +name: cystic artery +def: "An artery that supplies oxygenated blood to the cystic duct." [http://orcid.org/0000-0002-6601-2165, https://en.wikipedia.org/wiki/Cystic_artery] +subset: human_subset +subset: mouse_subset +synonym: "cholecystic artery" EXACT [FMA:14835] +xref: FMA:14835 +is_a: UBERON:0001637 ! artery +is_a: UBERON:0015796 ! liver blood vessel +intersection_of: UBERON:0001637 ! artery +intersection_of: vessel_supplies_blood_to UBERON:0001152 ! cystic duct +relationship: part_of UBERON:0015482 {source="FMA", source="Wikipedia"} ! right hepatic artery +relationship: vessel_supplies_blood_to UBERON:0001152 ! cystic duct +property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb" xsd:anyURI +property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb" xsd:anyURI + +[Term] +id: UBERON:0039228 +name: sigmoid vein +subset: human_subset +subset: mouse_subset +xref: FMA:15395 +is_a: UBERON:0001638 ! vein +intersection_of: UBERON:0001638 ! vein +intersection_of: vessel_drains_blood_from UBERON:0001159 ! sigmoid colon +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0001215 {source="FMA"} ! inferior mesenteric vein +relationship: vessel_drains_blood_from UBERON:0001159 ! sigmoid colon + +[Term] +id: UBERON:0039230 +name: prepyloric vein +def: "The prepyloric vein is the last connecting branch onto the right gastric vein, marking the end of the stomach, and draining the proximal part of the duodenum" [https://en.wikipedia.org/wiki/Right_gastric_vein#Structure] +subset: human_subset +subset: mouse_subset +synonym: "Mayo's vein" EXACT [FMA:15404] +xref: FMA:15404 +is_a: UBERON:0001638 ! vein + +[Term] +id: UBERON:0039232 +name: conus artery +def: "The conus artery is generally considered to be the first branch of the right coronary artery (RCA) in the right sinus of Valsalva. However, one study has shown that in approximately 50% of humans, the conus artery arises from a discrete ostium in the right sinus of Valsalva." [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4805038] +subset: human_reference_atlas +subset: human_subset +subset: mouse_subset +synonym: "second right coronary artery" EXACT [FMA:15736] +synonym: "third coronary artery" EXACT [FMA:15736] +xref: FMA:15736 +is_a: UBERON:0001621 {source="FMA"} ! coronary artery +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens + +[Term] +id: UBERON:0039256 +name: pubic vein +def: "vein ascending the posterior aspect of the body of the pubis to drain into the inferior epigastric vein; this vein frequently (about 20% of patients) serves as an accessory or replaced obturator vein." [https://medical-dictionary.thefreedictionary.com/pubic+vein] +subset: human_subset +subset: mouse_subset +synonym: "accessory obturator vein" EXACT [FMA:21200, https://medical-dictionary.thefreedictionary.com/pubic+vein] +synonym: "pubic branch" EXACT [FMA:21200] +synonym: "pubic branch of inferior epigastric vein" EXACT [https://medical-dictionary.thefreedictionary.com/pubic+vein] +xref: FMA:21200 +is_a: UBERON:0001638 ! vein +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0001316 {source="FMA"} ! external iliac vein + +[Term] +id: UBERON:0039258 +name: external vertebral venous plexus +subset: human_subset +subset: mouse_subset +synonym: "plexus venosus vertebralis externus" EXACT [FMA:12851] +xref: FMA:12851 +is_a: UBERON:0039259 ! vertebral venous plexus + +[Term] +id: UBERON:0039259 +name: vertebral venous plexus +subset: human_subset +subset: mouse_subset +xref: FMA:18935 +is_a: UBERON:0001593 {source="FMA"} ! venous plexus + +[Term] +id: UBERON:0039260 +name: thyrocervical artery +subset: human_subset +subset: mouse_subset +xref: FMA:70346 +is_a: UBERON:0004573 ! systemic artery +relationship: part_of UBERON:0001533 {source="FMA"} ! subclavian artery + +[Term] +id: UBERON:0039261 +name: pancreatic artery +subset: human_subset +subset: mouse_subset +xref: FMA:70471 +is_a: UBERON:0001637 ! artery +intersection_of: UBERON:0001637 ! artery +intersection_of: vessel_supplies_blood_to UBERON:0001264 ! pancreas +relationship: connecting_branch_of UBERON:0001194 ! splenic artery +relationship: part_of RO:0002577 ! system +relationship: vessel_supplies_blood_to UBERON:0001264 ! pancreas + +[Term] +id: UBERON:0039262 +name: segmental pulmonary artery +subset: human_subset +subset: mouse_subset +synonym: "segmental pulmonary arterial tree" EXACT [FMA:8755] +xref: FMA:8755 +is_a: UBERON:0002012 {source="FMA"} ! pulmonary artery + +[Term] +id: UBERON:0039267 +name: obsolete deep vein of penis +comment: obsoleted as believed to be equivalent to deep dorsal bein +xref: FMA:0329307 +is_obsolete: true +replaced_by: UBERON:0006656 + +[Term] +id: UBERON:0039288 +name: rima vulvae +def: "The fissure between the labia majora" [https://www.thefreedictionary.com/pudendal+cleft] +subset: human_subset +subset: mouse_subset +synonym: "pudendal cleft" EXACT DEPRECATED [doi:10.1002/ca.23705, FMA:19995] +synonym: "rima pudendi" EXACT OMO:0003011 [A09.2.01.006, doi:10.1002/ca.23705] +synonym: "urogenital cleft" BROAD [https://www.thefreedictionary.com/pudendal+cleft] +synonym: "vulvar slit" EXACT [https://www.thefreedictionary.com/pudendal+cleft] +xref: FMA:19995 +is_a: UBERON:0000464 ! anatomical space +relationship: adjacent_to UBERON:0004085 ! labium majora +relationship: part_of UBERON:0000997 ! mammalian vulva + +[Term] +id: UBERON:0039300 +name: obsolete male pudendum +xref: FMA:20461 +is_obsolete: true {source="doi:10.1002/ca.23705"} + +[Term] +id: UBERON:0039302 +name: obsolete pudendum +xref: FMA:20463 +is_obsolete: true {source="doi:10.1002/ca.23705"} + +[Term] +id: UBERON:0039351 +name: posterior labial artery +subset: human_subset +subset: mouse_subset +synonym: "posterior labial branch of internal pudendal artery" EXACT [FMA:20886] +xref: FMA:20886 +is_a: UBERON:0001637 ! artery +relationship: connecting_branch_of UBERON:0001358 {source="FMA"} ! perineal artery +relationship: part_of RO:0002577 ! system + +[Term] +id: UBERON:0039355 +name: urethral artery +subset: human_subset +subset: mouse_subset +synonym: "arteria urethralis" EXACT OMO:0003011 [A12.2.15.042] +xref: FMA:20903 +is_a: UBERON:0001637 ! artery +intersection_of: UBERON:0001637 ! artery +intersection_of: vessel_supplies_blood_to UBERON:0000057 ! urethra +relationship: part_of RO:0002577 ! system +relationship: vessel_supplies_blood_to UBERON:0000057 ! urethra + +[Term] +id: UBERON:0039376 +name: penile bulb vein +subset: human_subset +subset: mouse_subset +synonym: "bulb of penis vein" EXACT [FMA:21267] +synonym: "vena bulbi penis" EXACT [FMA:21267] +xref: FMA:21267 +is_a: UBERON:0001638 ! vein +intersection_of: UBERON:0001638 ! vein +intersection_of: vessel_drains_blood_from UBERON:0013128 ! bulb of penis +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0018252 {source="FMA"} ! internal pudendal vein +relationship: vessel_drains_blood_from UBERON:0013128 ! bulb of penis + +[Term] +id: UBERON:0039377 +name: urethral vein +def: "A vein that drains the urethra." [UBERON:cjm] +subset: human_subset +subset: mouse_subset +xref: FMA:21270 +is_a: UBERON:0001638 ! vein +intersection_of: UBERON:0001638 ! vein +intersection_of: vessel_drains_blood_from UBERON:0000057 ! urethra +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0018252 {source="FMA"} ! internal pudendal vein +relationship: vessel_drains_blood_from UBERON:0000057 ! urethra + +[Term] +id: UBERON:0039379 +name: vestibular bulb vein +subset: human_subset +subset: mouse_subset +synonym: "vena bulbi vestibuli" EXACT [FMA:21273] +xref: FMA:21273 +is_a: UBERON:0001638 ! vein +intersection_of: UBERON:0001638 ! vein +intersection_of: vessel_drains_blood_from UBERON:0013129 ! bulb of vestibule +relationship: part_of RO:0002577 ! system +relationship: tributary_of UBERON:0018252 {source="FMA"} ! internal pudendal vein +relationship: vessel_drains_blood_from UBERON:0013129 ! bulb of vestibule + +[Term] +id: UBERON:0039418 +name: Alcock's canal +def: "An anatomical conduit in the pelvis through which the internal pudendal artery, internal pudendal veins, and the pudendal nerve pass." [https://en.wikipedia.org/wiki/Pudendal_canal] +subset: human_subset +subset: mouse_subset +synonym: "canalis pudendalis" EXACT OMO:0003011 [A09.5.04.003, doi:10.1002/ca.23705] +synonym: "pudendal canal" EXACT DEPRECATED [doi:10.1002/ca.23705, FMA:22071] +xref: FMA:22071 +is_a: UBERON:0004111 ! anatomical conduit + +[Term] +id: UBERON:0039421 +name: superficial dorsal vein of penis +def: "A vein that drains the prepuce and skin of the penis, and, running backward in the subcutaneous tissue, inclines to the right or left, and opens into the corresponding superficial external pudendal vein, a tributary of the great saphenous vein.." [https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis] +subset: human_subset +subset: mouse_subset +xref: FMA:21384 +is_a: UBERON:0039422 ! dorsal vein of penis +relationship: part_of RO:0002577 ! system +relationship: part_of UBERON:0000989 {source="FMA"} ! penis +relationship: tributary_of UBERON:0009049 {source="FMA"} ! superficial external pudendal vein +relationship: vessel_drains_blood_from UBERON:0001331 ! skin of penis +relationship: vessel_drains_blood_from UBERON:0001332 ! prepuce of penis + +[Term] +id: UBERON:0039422 +name: dorsal vein of penis +def: "One of the superficial dorsal vein of the penis or the deep dorsal vein of the penis." [https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis] +subset: human_subset +subset: mouse_subset +is_a: UBERON:0001638 ! vein +is_a: UBERON:0005156 ! reproductive structure +union_of: UBERON:0006656 ! deep dorsal vein of penis +union_of: UBERON:0039421 ! superficial dorsal vein of penis +relationship: part_of UBERON:0000989 ! penis + +[Term] +id: UBERON:0039835 +name: posterior intercostal artery +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005612 ! intercostal artery + +[Term] +id: UBERON:0039838 +name: seventh anterior intercostal artery +subset: human_subset +subset: mouse_subset +xref: FMA:10649 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0006632 {source="FMA"} ! musculo-phrenic artery + +[Term] +id: UBERON:0039839 +name: eighth anterior intercostal artery +subset: human_subset +subset: mouse_subset +xref: FMA:10650 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0006632 {source="FMA"} ! musculo-phrenic artery + +[Term] +id: UBERON:0039840 +name: ninth anterior intercostal artery +subset: human_subset +subset: mouse_subset +xref: FMA:10651 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0006632 {source="FMA"} ! musculo-phrenic artery + +[Term] +id: UBERON:0039841 +name: first anterior intercostal artery +subset: human_subset +subset: mouse_subset +synonym: "first intercostal branch of internal thoracic artery" EXACT [FMA:10652] +xref: FMA:10652 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery + +[Term] +id: UBERON:0039842 +name: second anterior intercostal artery +subset: human_subset +subset: mouse_subset +synonym: "second intercostal branch of internal thoracic artery" EXACT [FMA:10653] +xref: FMA:10653 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery + +[Term] +id: UBERON:0039843 +name: third anterior intercostal artery +subset: human_subset +subset: mouse_subset +synonym: "third intercostal branch of internal thoracic artery" EXACT [FMA:10654] +xref: FMA:10654 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery + +[Term] +id: UBERON:0039844 +name: fourth anterior intercostal artery +subset: human_subset +subset: mouse_subset +synonym: "fourth intercostal branch of internal thoracic artery" EXACT [FMA:10655] +xref: FMA:10655 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery + +[Term] +id: UBERON:0039845 +name: fifth anterior intercostal artery +subset: human_subset +subset: mouse_subset +synonym: "fifth intercostal branch of internal thoracic artery" EXACT [FMA:10656] +xref: FMA:10656 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery + +[Term] +id: UBERON:0039846 +name: sixth anterior intercostal artery +subset: human_subset +subset: mouse_subset +synonym: "sixth intercostal branch of internal thoracic artery" EXACT [FMA:10657] +xref: FMA:10657 +is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery +relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery + +[Term] +id: UBERON:0039847 +name: suprascapular artery +subset: human_subset +subset: mouse_subset +synonym: "transverse scapular artery" EXACT [FMA:10663] +xref: FMA:10663 +is_a: UBERON:0004573 ! systemic artery +relationship: part_of UBERON:0039260 {source="FMA"} ! thyrocervical artery + +[Term] +id: UBERON:0039848 +name: anterior external vertebral venous plexus +subset: human_subset +subset: mouse_subset +xref: FMA:10787 +is_a: UBERON:0039258 {source="FMA"} ! external vertebral venous plexus + +[Term] +id: UBERON:0039849 +name: posterior external vertebral venous plexus +subset: human_subset +subset: mouse_subset +xref: FMA:12852 +is_a: UBERON:0039258 {source="FMA"} ! external vertebral venous plexus + +[Term] +id: UBERON:0039850 +name: left anterior segmental artery +subset: human_subset +subset: mouse_subset +synonym: "anterior bronchopulmonary segment of left pulmonary artery" EXACT [FMA:13279] +synonym: "anterior segmental artery of left lung" EXACT [FMA:13279] +synonym: "anterior segmental artery of left upper lobe" EXACT [FMA:13279] +xref: FMA:13279 +is_a: UBERON:0001637 ! artery +relationship: part_of UBERON:0001652 ! left pulmonary artery + +[Term] +id: UBERON:0039851 +name: apicoposterior segmental artery +subset: human_subset +subset: mouse_subset +synonym: "apicoposterior artery of left lung" EXACT [FMA:13281] +synonym: "apicoposterior bronchopulmonary segment of left pulmonary artery" EXACT [FMA:13281] +synonym: "left apicoposterior pulmonary artery" EXACT [FMA:13281] +xref: FMA:13281 +is_a: UBERON:0039262 {source="FMA"} ! segmental pulmonary artery + +[Term] +id: UBERON:0039856 +name: right ovarian vein +def: "Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament." [FMA:14342] +subset: human_subset +subset: mouse_subset +xref: FMA:14342 +is_a: UBERON:0001145 ! ovarian vein +intersection_of: UBERON:0001145 ! ovarian vein +intersection_of: vessel_drains_blood_from UBERON:0002118 ! right ovary +relationship: tributary_of UBERON:0001072 {source="FMA"} ! inferior vena cava +relationship: vessel_drains_blood_from UBERON:0002118 ! right ovary + +[Term] +id: UBERON:0039857 +name: left ovarian vein +def: "Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament." [FMA:14347] +subset: human_subset +subset: mouse_subset +xref: FMA:14347 +is_a: UBERON:0001145 ! ovarian vein +intersection_of: UBERON:0001145 ! ovarian vein +intersection_of: vessel_drains_blood_from UBERON:0002119 ! left ovary +relationship: vessel_drains_blood_from UBERON:0002119 ! left ovary + +[Term] +id: UBERON:0700019 +name: parallel fiber +def: "A parallel fiber results from the axon of a cerebellar granule cell ascending through the molecular layer where it synapses on the dendritic branches of Purkinje cells and stellate cells." [doi:10.1007/978-94-007-1333-8_63, GO:1990032] +comment: This a grouping class for parallel fibers in any species. If annotating a parallel fiber in any species other than teleost fish, consider using 'parallel fiber, bifurcated'. +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006134 ! nerve fiber +is_a: UBERON:0011215 ! central nervous system cell part cluster +relationship: overlaps CL:0001031 ! cerebellar granule cell +relationship: part_of UBERON:0002037 ! cerebellum +property_value: dcterms-date "2023-07-10T11:45:59Z" xsd:dateTime + +[Term] +id: UBERON:0700020 +name: parallel fiber, bifurcated +def: "A parallel fiber that results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium." [GO:1990032] +subset: human_subset +subset: mouse_subset +is_a: UBERON:0700019 ! parallel fiber +disjoint_from: UBERON:2002218 ! parallel fiber, teleost +relationship: never_in_taxon NCBITaxon:70862 ! teleost fish +property_value: dcterms-date "2023-07-10T11:53:19Z" xsd:dateTime + +[Term] +id: UBERON:1000000 +name: chin ventral margin +def: "Subdivision of the head consisting of the area along the lower edge of the chin." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0001444 ! subdivision of head +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0008199 ! chin + +[Term] +id: UBERON:1000001 +name: collection of hairs on vertex +def: "A collection of hairs that grows on the vertex (top of head)." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "collection of hair on cranium" RELATED [] +synonym: "cranial hair" RELATED [] +synonym: "head hair" RELATED [] +is_a: UBERON:0014382 ! collection of hairs on head or neck +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0000033 ! head + +[Term] +id: UBERON:1000002 +name: cranial midline area +def: "The middle part of the head, located approximately equidistant from the left and the right sides of the head." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "cranial midline" RELATED [] +is_a: UBERON:0001444 ! subdivision of head +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: intersects_midsagittal_plane_of UBERON:0000033 ! head + +[Term] +id: UBERON:1000003 +name: dewlap +def: "A longitudinal flap of skin that hangs beneath the lower jaw or neck." [Wikipedia:Dewlap] +comment: Compare with: comb and wattle +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +xref: SCTID:13622004 +xref: Wikipedia:Dewlap +is_a: UBERON:1000021 ! skin of face +relationship: part_of UBERON:0001456 ! face + +[Term] +id: UBERON:1000004 +name: collection of hair on external ear +def: "A collection of hairs that grows on the external ear." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "external ear hair" RELATED [] +is_a: UBERON:0014382 ! collection of hairs on head or neck +intersection_of: UBERON:0010164 ! collection of hairs +intersection_of: part_of UBERON:0001691 ! external ear +relationship: composed_primarily_of UBERON:0022279 ! strand of hair on external ear +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0001691 ! external ear + +[Term] +id: UBERON:1000005 +name: external ear margin +def: "Area along the edge of the external ear." [https://github.com/obophenotype/uberon/issues/34, https://orcid.org/0000-0002-2825-0621, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0010000 ! multicellular anatomical structure +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0001691 ! external ear +property_value: seeAlso "https://github.com/obophenotype/uberon/issues/1795" xsd:string + +[Term] +id: UBERON:1000006 +name: collection of hair on forehead +def: "A collection of hairs that grows on the forehead." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0010165 ! collection of hair on face +intersection_of: UBERON:0010164 ! collection of hairs +intersection_of: part_of UBERON:0008200 ! forehead +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0008200 ! forehead + +[Term] +id: UBERON:1000007 +name: forehead protuberance +def: "A bulge, knob, or swelling that protrudes from the forehead." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0010188 ! protuberance +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0008200 ! forehead + +[Term] +id: UBERON:1000008 +name: left part of face +def: "Subdivision of the head consisting of the left half of the face, vertically divided." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0001444 ! subdivision of head +is_a: UBERON:0015212 ! lateral structure +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: in_left_side_of UBERON:0001456 ! face +relationship: part_of UBERON:0001456 ! face + +[Term] +id: UBERON:1000009 +name: midline crest +def: "A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0001444 ! subdivision of head +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: in_taxon NCBITaxon:7742 ! Vertebrata + +[Term] +id: UBERON:1000010 +name: mole +def: "A benign tumor on the skin, usually with darker pigment." [Wikipedia:Melanocytic_nevus] +subset: efo_slim +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "melanocytic nevus" RELATED [] +synonym: "naevus" EXACT [ZFA:0005043] +synonym: "nevus" EXACT [ZFA:0005043] +xref: EFO:0000625 +xref: MESH:D009506 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", pav:authoredBy="https://orcid.org/0000-0001-9439-5346"} +xref: MPATH:361 +xref: TAO:0005043 +xref: Wikipedia:Melanocytic_nevus +xref: ZFA:0005043 +is_a: UBERON:0000479 ! tissue +relationship: has_part CL:0000148 ! melanocyte +relationship: part_of UBERON:0002067 {source="ZFA"} ! dermis +property_value: external_definition "An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005043", ontology="TAO", source="ZFIN:curator"} + +[Term] +id: UBERON:1000011 +name: labial commissure +def: "Anatomical structure consisting of either corner of the mouth." [Wikipedia:Labial_commissure_of_mouth] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "commissura labiorum oris" RELATED OMO:0003011 [Wikipedia:Labial_commissure_of_mouth] +synonym: "commissural lip" RELATED [] +synonym: "corner of mouth" RELATED [] +xref: FMA:277716 +xref: Wikipedia:Labial_commissure_of_mouth +is_a: UBERON:0034929 ! external soft tissue zone +relationship: part_of UBERON:0000165 ! mouth +property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/90/Commissurebeforeandafter.jpg" xsd:anyURI + +[Term] +id: UBERON:1000012 +name: nose anterior margin +def: "Subdivision of the head consisting of the area along the front edge of the external nose." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0034929 ! external soft tissue zone +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0007827 ! external nose + +[Term] +id: UBERON:1000013 +name: nose vertex +def: "The extreme point of curvature of the external nose." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0034929 ! external soft tissue zone +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0007827 ! external nose + +[Term] +id: UBERON:1000014 +name: right part of face +def: "Subdivision of the head consisting of the right half of the face, vertically divided." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0001444 ! subdivision of head +is_a: UBERON:0015212 ! lateral structure +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: in_right_side_of UBERON:0001456 ! face +relationship: part_of UBERON:0001456 ! face + +[Term] +id: UBERON:1000015 +name: skin of snout +def: "A zone of skin that is part of the snout." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: mouse_subset +subset: phenotype_rcn +synonym: "snout skin" EXACT [MA:0003079] +xref: EMAPA:37746 {source="MA:th"} +xref: MA:0003079 +is_a: UBERON:1000021 ! skin of face +intersection_of: UBERON:0000014 ! zone of skin +intersection_of: part_of UBERON:0006333 ! snout +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0006333 ! snout + +[Term] +id: UBERON:1000016 +name: tip of snout +def: "Subdivision of the head consisting of the pointed or rounded end or extremity of the snout." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0034929 ! external soft tissue zone +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0006333 ! snout + +[Term] +id: UBERON:1000017 +name: tip of external ear +def: "Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0034929 ! external soft tissue zone +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0001691 ! external ear + +[Term] +id: UBERON:1000018 +name: cluster of hairs +def: "A small collection or tuft of hairs." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "tuft of hair" RELATED [] +is_a: UBERON:0010164 ! collection of hairs +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 + +[Term] +id: UBERON:1000019 +name: top of head +def: "The top of the head." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: phenotype_rcn +synonym: "vertex" RELATED [FMA:46484] +synonym: "vertex of head" EXACT [FMA:46484] +xref: FMA:46484 +xref: SCTID:362616002 +is_a: UBERON:0001444 ! subdivision of head +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +property_value: external_ontology_notes "in the FMA, vertex is a point and not a subdivision" xsd:string {external_ontology="FMA"} + +[Term] +id: UBERON:1000020 +name: collection of hair on snout +def: "A collection of hairs that grows on the snout." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: mouse_subset +subset: phenotype_rcn +is_a: UBERON:0010165 ! collection of hair on face +intersection_of: UBERON:0010165 ! collection of hair on face +intersection_of: part_of UBERON:0006333 ! snout +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0006333 ! snout +creation_date: 2012-02-05T05:21:29Z + +[Term] +id: UBERON:1000021 +name: skin of face +def: "A zone of skin that is part of the face." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +subset: human_subset +subset: mouse_subset +subset: pheno_slim +subset: phenotype_rcn +synonym: "face skin" EXACT [EMAPA:36657, FMA:24758] +synonym: "facial skin" RELATED [] +xref: EMAPA:36657 +xref: FMA:24758 +xref: NCIT:C33561 +xref: SCTID:361703006 +xref: UMLS:C0222084 {source="ncithesaurus:Skin_of_the_Face"} +is_a: UBERON:0001084 ! skin of head +intersection_of: UBERON:0000014 ! zone of skin +intersection_of: part_of UBERON:0001456 ! face +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +relationship: part_of UBERON:0001456 ! face +creation_date: 2012-02-05T05:23:01Z + +[Term] +id: UBERON:1000022 +name: Zymbal's gland +def: "A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal." [http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/zymbalgland.html, ISBN:0123813611, MP:0013384] +subset: mouse_subset +synonym: "auditory sebaceous gland" RELATED [ISBN:0123813611] +synonym: "gland of Zymbal" RELATED [] +synonym: "Zymbal gland" RELATED [MA:0002900] +xref: EMAPA:37808 {source="MA:th"} +xref: MA:0002900 +xref: NCIT:C77954 +xref: SCTID:105587007 +xref: UMLS:C0687056 {source="ncithesaurus:Zymbal_Gland"} +is_a: UBERON:0015251 {source="ISBN:0123813611", source="MA"} ! modified sebaceous gland +relationship: in_taxon NCBITaxon:9989 ! Rodentia +relationship: part_of UBERON:0001691 {source="cjm"} ! external ear +property_value: location_notes "located anterior and ventral to the exterior ear canal in rodents[MP:0013384]" xsd:string +property_value: structure_notes "Zymbal's glands are located beneath squamous epithelium at the anterior and posterior aspect of the ear canal, and as a single external gland that is located anterior and ventral to the base of the external ear canal. The bilateral Zymbal's glands are adjacent to the auditory canal and are made up of several lobules of modified sebaceous glands - http://ratguide.com/health/neoplasia/zymbals_gland_tumor.php." xsd:string + +[Term] +id: UBERON:1000023 +name: spleen pulp +def: "The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages." [ncithesaurus:Splenic_Pulp] +subset: human_reference_atlas +subset: human_subset +subset: mouse_subset +synonym: "Malpighian corpuscles" EXACT [FMA:15845] +synonym: "pulp of spleen" EXACT [] +synonym: "splenic pulp" EXACT [] +xref: EMAPA:35805 +xref: FMA:15845 +xref: MA:0002487 +xref: NCIT:C33603 +xref: SCTID:13515001 +xref: UMLS:C0229691 {source="ncithesaurus:Splenic_Pulp"} +is_a: UBERON:0000064 ! organ part +relationship: part_of UBERON:1000024 {source="FMA"} ! parenchyma of spleen +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens + +[Term] +id: UBERON:1000024 +name: parenchyma of spleen +def: "A parenchyma that is part of a spleen." [OBOL:automatic] +subset: human_subset +subset: mouse_subset +synonym: "splenic parenchyma" EXACT [FMA:16029] +xref: FMA:16029 +is_a: UBERON:0000353 ! parenchyma +intersection_of: UBERON:0000353 ! parenchyma +intersection_of: part_of UBERON:0002106 ! spleen +relationship: part_of UBERON:0002106 ! spleen + +[Term] +id: UBERON:1100000 +name: digestive tract junction +def: "An anatomical junction between two parts of the digestive tract." [https://orcid.org/0000-0002-7073-9172] +subset: human_subset +subset: mouse_subset +is_a: UBERON:0007651 ! anatomical junction +intersection_of: UBERON:0007651 ! anatomical junction +intersection_of: connects UBERON:0004921 ! subdivision of digestive tract +relationship: connects UBERON:0004921 ! subdivision of digestive tract +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +creation_date: 2021-02-05T11:19:31Z + +[Term] +id: UBERON:1200000 +name: ileocecal fold +def: "A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa." [https://en.wikipedia.org/wiki/Ileocecal_fold] +subset: human_subset +subset: mouse_subset +synonym: "ileocaecal fold" EXACT [] +xref: FMA:16532 +is_a: UBERON:0034696 ! fold of peritoneum +relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 +property_value: dcterms-date "2025-01-15T10:00:00Z" xsd:dateTime +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3326" xsd:anyURI +created_by: dragon-ai-agent + +[Term] +id: UBERON:1200001 +name: sixth lumbar dorsal root ganglion +def: "The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra." [PMID:18316160] +subset: defined_by_ordinal_series +subset: human_subset +subset: mouse_subset +synonym: "L6 dorsal root ganglion" EXACT [] +synonym: "sixth lumbar spinal ganglion" EXACT [] +is_a: UBERON:0002836 ! lumbar dorsal root ganglion +relationship: dc-contributor https://orcid.org/0000-0003-0289-8988 +property_value: dcterms-date "2025-11-03T00:00:00Z" xsd:dateTime +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3618" xsd:anyURI +created_by: dragon-ai-agent + +[Term] +id: UBERON:1200002 +name: carotid artery intima-media region +def: "A region of the carotid artery wall composed of the tunica intima and tunica media." [PMID:39416432] +subset: human_subset +subset: mouse_subset +synonym: "carotid intima-media" EXACT [PMID:39416432] +is_a: UBERON:0000481 ! multi-tissue structure +relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 +relationship: has_part UBERON:0002522 ! tunica media +relationship: has_part UBERON:0002523 ! tunica intima +relationship: part_of NCBITaxon:6072 ! Eumetazoa +relationship: part_of UBERON:0005396 ! carotid artery segment +property_value: dcterms-date "2025-11-14T00:00:00Z" xsd:dateTime +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3629" xsd:anyURI +created_by: dragon-ai-agent + +[Term] +id: UBERON:1200003 +name: uterine fundus +def: "The superior, dome-shaped portion of the uterus." [PMID:40653088, PMID:41204538] +subset: human_subset +subset: mouse_subset +synonym: "fundus of uterus" EXACT [] +synonym: "fundus uteri" EXACT OMO:0003011 [PMID:39112955] +is_a: UBERON:0000064 ! organ part +is_a: UBERON:0005156 ! reproductive structure +relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 +relationship: part_of UBERON:0000995 ! uterus +property_value: dcterms-date "2025-12-03T00:00:00Z" xsd:dateTime +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3637" xsd:anyURI +created_by: dragon-ai-agent + +[Term] +id: UBERON:1200005 +name: acromial process of scapula +def: "A skeletal element projection forming the flattened lateral continuation of the scapular spine, overhanging the glenohumeral joint and articulating with the lateral end of the clavicle at the acromioclavicular joint; it provides attachment for the deltoid muscle anteriorly and the trapezius posteriorly." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200006 +name: alae of sacrum +def: "A skeletal element projection forming the broad, wing-like lateral expansions of the sacral base, lateral to the body of S1, that articulate with the ilium at the sacroiliac joints and support the weight transfer between the vertebral column and the pelvic girdle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200007 +name: alveolar border of mandible +def: "A zone of bone organ forming the superior margin of the mandibular body, bearing the dental alveoli (sockets) that house the roots of the lower teeth." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200008 +name: anterior arch of first cervical vertebra +def: "An arch of atlas forming the anterior curved bar of the ring-shaped atlas (C1), spanning between the two lateral masses and bearing the anterior tubercle on its outer surface; it articulates with the dens of the axis via a synovial facet on its posterior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005814 ! arch of atlas +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200009 +name: anterior clinoid process of sphenoid bone +def: "A skeletal element projection situated at the medial end of the posterior border of each lesser wing of the sphenoid bone, projecting posteromedially above the cavernous sinus; it provides attachment for the free edge of the tentorium cerebelli and serves as an important surgical landmark for the internal carotid artery." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200010 +name: anterior gluteal line of ilium of os coxa +def: "A zone of bone organ forming a curved ridge on the gluteal surface of the ilium of the os coxa (innominate bone), running from the iliac crest toward the greater sciatic notch and separating the areas of origin of the gluteus medius superiorly from the gluteus minimus inferiorly." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200011 +name: anterior sacral foramina of sacrum +def: "A bone foramen located on the pelvic (anterior) surface of the sacrum; one of four pairs of openings arranged in two vertical rows that transmit the ventral rami of the upper four sacral spinal nerves and accompanying blood vessels into the pelvic cavity." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200012 +name: anterior tubercle of first cervical vertebra +def: "A skeletal element projection situated on the anterior midline surface of the anterior arch of the atlas (C1), serving as the attachment point for the anterior longitudinal ligament and the longus colli muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200013 +name: anterolateral tubercle of tibia +def: "A skeletal element projection situated on the anterolateral aspect of the proximal tibial epiphysis, just inferior to the lateral articular surface. It serves as an attachment site for the anterior horn of the lateral meniscus and elements of the anterolateral ligamentous complex of the knee." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200014 +name: arcuate line of ilium of os coxa +def: "A zone of bone organ forming a smooth, rounded ridge on the medial surface of the ilium of the os coxa (innominate bone), continuing the pelvic brim from the sacral promontory toward the iliopectineal eminence and demarcating the boundary between the greater and lesser pelvis." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200015 +name: articular surface for cuboid bone of calcaneus +def: "A zone of bone organ forming the anterior articular facet on the distal end of the calcaneus that articulates with the proximal surface of the cuboid bone, constituting the calcaneocuboid joint and contributing to the transverse tarsal (Chopart) joint complex." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200016 +name: articular tubercle of squamous part of temporal bone +def: "A skeletal element projection forming the anterior articular eminence of the temporomandibular joint, situated at the root of the zygomatic process on the inferior aspect of the squamous part. Its convex surface articulates with the condylar head of the mandible during jaw opening and provides the functional articular surface against which the condyle translates." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200017 +name: auricular surface of ilium of os coxa +def: "A zone of bone organ forming the ear-shaped articular surface on the posteromedial aspect of the ilium of the os coxa (innominate bone), covered by fibrocartilage and articulating with the corresponding auricular surface of the sacrum to form the sacroiliac joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200018 +name: base of first distal phalanx of foot +def: "A zone of bone organ forming the proximal end of the distal phalanx of the hallux, bearing a concave articular surface that articulates with the head of the proximal phalanx of the first toe at the interphalangeal joint of the hallux." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004315 ! distal phalanx of pedal digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200019 +name: base of first distal phalanx of hand +def: "A zone of bone organ forming the proximal articular end of the distal phalanx of the thumb, presenting a concave surface that articulates with the head of the proximal phalanx at the interphalangeal joint of the thumb." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004337 ! distal phalanx of manual digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200020 +name: base of first proximal phalanx of foot +def: "A zone of bone organ forming the proximal end of the proximal phalanx of the hallux, bearing a concave articular facet that articulates with the first metatarsal head at the first metatarsophalangeal joint and receives the insertions of the flexor hallucis brevis tendons via the sesamoid complex." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004332 ! proximal phalanx of pedal digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200021 +name: base of first proximal phalanx of hand +def: "A zone of bone organ forming the proximal end of the proximal phalanx of the thumb, presenting an oval concave articular surface that receives the head of the first metacarpal at the metacarpophalangeal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004338 ! proximal phalanx of manual digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200022 +name: body of calcaneus +def: "A zone of bone organ forming the large central mass of the calcaneus, situated between the calcaneal tuberosity posteriorly and the articular surfaces anteriorly, and bearing the posterior and middle talar articular facets on its superior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200023 +name: body of second cervical vertebra +def: "A bony vertebral centrum forming the compact cylindrical body of the axis (C2), which is smaller and more robust than typical cervical vertebra bodies; it bears the dens (odontoid process) on its superior surface and articulates inferiorly with the body of the third cervical vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0001075 ! bony vertebral centrum +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200024 +name: body of sphenoid bone +def: "A zone of bone organ forming the central, cuboidal portion of the sphenoid bone, located at the base of the skull between the ethmoid bone anteriorly and the basilar part of the occipital bone posteriorly; it contains the paired sphenoidal air sinuses and bears the sella turcica on its superior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200025 +name: calcaneal sulcus of calcaneus +def: "A surface groove oriented obliquely on the superior surface of the calcaneus, running between the posterior and middle talar articular facets. Together with the corresponding sulcus tali of the talus it forms the tarsal sinus, which lodges the interosseous talocalcaneal ligament." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200026 +name: coccygeal cornu of coccyx +def: "A skeletal element projection arising from the superior surface of the first coccygeal segment as a pair of upward-projecting rounded processes that articulate with the sacral cornua to form the sacrococcygeal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Coccyx] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001350 ! coccyx +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200027 +name: coronoid fossa of humerus +def: "A bone fossa situated on the anterior surface of the distal humerus, immediately superior to the medial trochlea, that accommodates the coronoid process of the ulna at full elbow flexion. It is separated from the olecranon fossa on the posterior surface only by a thin plate of bone." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Humerus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000976 ! humerus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200028 +name: costal groove of first rib +def: "A surface groove running along the inferior border of the body of the first rib that lodges the intercostal nerve and vessels. In the first rib this groove is less pronounced than in typical ribs because the first rib is nearly horizontal and broad, with its superior surface facing upward rather than medially." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200029 +name: costal groove of twelfth rib +def: "A surface groove on the inferior border of the body of the twelfth rib that accommodates the subcostal nerve and accompanying vessels. The groove is poorly defined or absent in the twelfth rib, which is the shortest rib and lacks the typical inferior curvature that shelters neurovascular structures in typical ribs." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004611 ! rib 12 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200030 +name: costal notches of sternum +def: "A zone of bone organ comprising the articular facets on the lateral borders of the sternum that receive the costal cartilages of ribs 1–7; the manubrium bears notches for ribs 1 and the upper half of rib 2, the body bears notches for ribs 2–7, and the xiphisternal junction may bear a partial notch for rib 7." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sternum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000975 ! sternum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200031 +name: crista galla of ethmoid bone +def: "A crest projecting superiorly from the midline of the cribriform plate into the anterior cranial fossa, providing the anterior attachment for the falx cerebri." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ethmoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001679 ! ethmoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200032 +name: digastric fossa of mandible +def: "A shallow bone fossa on the inferior surface of the mandibular body adjacent to the symphysis menti, one on each side of the midline, serving as the attachment site for the anterior belly of the digastric muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200033 +name: dorsum sellae of sphenoid bone +def: "A zone of bone organ forming the posterior vertical plate of the sella turcica on the superior surface of the sphenoid body, bounded above by the posterior clinoid processes; it forms the posterior wall of the hypophyseal fossa and, together with the clivus of the occipital bone, supports the basilar artery and pons." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200034 +name: ethmoidal air cells of ethmoid bone +def: "A zone of bone organ comprising the paired lateral masses (labyrinths) of the ethmoid bone, consisting of multiple thin-walled, interconnected cavities that form part of the paranasal sinuses and lie between the medial orbital wall and the lateral nasal wall." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ethmoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001679 ! ethmoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200035 +name: ethmoidal bulla of ethmoid bone +def: "A zone of bone organ forming the largest and most prominent of the anterior ethmoidal air cells, which bulges into the middle meatus of the nasal cavity lateral to the middle nasal concha and superior to the semilunar hiatus." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ethmoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001679 ! ethmoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200036 +name: external auditory meatus of squamous part of temporal bone +def: "A bone foramen forming the lateral opening of the external acoustic canal, bounded superiorly and posteriorly by the squamous and tympanic parts of the temporal bone. It transmits sound waves toward the tympanic membrane and is partly formed by the tympanic plate inferiorly." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200038 +name: facet of eleventh rib +def: "A zone of bone organ on the head of the eleventh rib that forms a single, undivided articular surface for articulation exclusively with the body of the eleventh thoracic vertebra. Because the eleventh rib is an atypical floating rib, its head bears only one facet rather than the two demifacets found on typical ribs." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004610 ! rib 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200039 +name: facet of first rib +def: "A zone of bone organ on the head of the first rib forming a single, oval articular surface that articulates exclusively with the body of the first thoracic vertebra. Unlike typical ribs, the head of the first rib is not divided into two demifacets because it does not articulate with the vertebra above." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200040 +name: facet of tenth rib +def: "A zone of bone organ on the head of the tenth rib that is typically a single articular surface articulating with the body of the tenth thoracic vertebra alone. The tenth rib is transitional: in most individuals its head bears only one facet, though it may occasionally retain a small superior demifacet." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004609 ! rib 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200041 +name: facet of twelfth rib +def: "A zone of bone organ on the head of the twelfth rib forming a single, rounded articular surface that articulates exclusively with the body of the twelfth thoracic vertebra. The twelfth rib is a floating atypical rib and, like the eleventh, has an undivided head with no superior demifacet." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004611 ! rib 12 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200042 +name: fibular facet of tibia +def: "A zone of bone organ forming the slightly concave articular surface on the inferoposterior aspect of the lateral condyle of the tibia, which articulates with the head of the fibula at the proximal tibiofibular joint. It is oriented posterolaterally and is reinforced by the anterior and posterior ligaments of the proximal tibiofibular joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200043 +name: fibular notch of tibia +def: "A bone foramen forming the concave depression on the lateral aspect of the distal tibial epiphysis that receives the distal end of the fibula, constituting the tibial component of the inferior tibiofibular syndesmosis. Its surfaces are roughened for attachment of the anterior and posterior tibiofibular ligaments and the interosseous ligament." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200044 +name: fibular trochlea of calcaneus +def: "A skeletal element projection forming the small, ridge-like eminence on the lateral surface of the calcaneus, situated between the superior and inferior peroneal retinacula; it separates the tendon grooves of the fibularis brevis above from the fibularis longus below." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200045 +name: foramen ovale of sphenoid bone +def: "A bone foramen located in the greater wing of the sphenoid bone, posterior to the foramen rotundum and lateral to the foramen lacerum; it transmits the mandibular nerve (cranial nerve V3), the accessory meningeal artery, and the lesser petrosal nerve." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0013685 ! foramen of skull +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200046 +name: fossa for lacrimal sac of lacrimal bone +def: "A bone fossa situated on the anterior part of the medial orbital wall, formed by the frontal process of the maxilla and the lacrimal bone; it lodges the lacrimal sac and communicates inferiorly with the nasolacrimal canal, which drains tears into the inferior nasal meatus." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lacrimal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:7500103 ! preorbital fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001680 ! lacrimal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200047 +name: frontal crest of frontal bone +def: "A crest projecting from the internal surface of the frontal bone in the midline, descending from the foramen cecum toward the groove for the superior sagittal sinus. It provides attachment for the falx cerebri." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Frontal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000209 ! tetrapod frontal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200048 +name: glabella of frontal bone +def: "A zone of bone organ forming the smooth, slightly convex midline prominence of the frontal bone located between the two superciliary arches, just above the nasion. It is the most anterior projecting point of the forehead in the median plane." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Frontal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000209 ! tetrapod frontal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200050 +name: gluteal surface of ilium of os coxa +def: "A zone of bone organ forming the broad, posterolateral convex surface of the ilium of the os coxa (innominate bone), bounded by the iliac crest superiorly and the acetabulum inferiorly, and providing the origin for the three gluteal muscles and the tensor fasciae latae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200051 +name: gluteal tuberosity of femur +def: "A skeletal element projection situated on the posterior surface of the femoral shaft, lateral to the linea aspera, extending from the base of the greater trochanter inferiorly. It presents as a roughened ridge or elongated eminence and serves as the primary insertion site for the gluteus maximus muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Femur] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000981 ! femur +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200052 +name: granula foveaolae of parietal bone +def: "A zone of bone organ consisting of small pits on the inner surface of the parietal bone, most numerous near the sagittal suture, that lodge the arachnoid granulations (Pacchionian bodies) responsible for reabsorption of cerebrospinal fluid into the dural venous sinuses." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Parietal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000210 ! tetrapod parietal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200053 +name: greater palatine canal of maxilla +def: "A bone foramen forming a vertical canal at the junction of the maxilla and perpendicular plate of the palatine bone that transmits the greater palatine nerve and descending palatine vessels from the pterygopalatine fossa to the hard palate." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Maxilla] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0013685 ! foramen of skull +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0002397 ! maxilla +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200054 +name: greater wings of sphenoid bone +def: "A zone of bone organ forming the large lateral expansions of the sphenoid body that extend outward and upward to contribute to the floor of the middle cranial fossa, the lateral wall of the orbit, and the temporal and infratemporal fossae; each wing bears the foramen rotundum, foramen ovale, and foramen spinosum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200055 +name: groove for fibularis longus tendon of cuboid +def: "A surface groove forming the oblique channel on the plantar surface of the cuboid bone, through which the tendon of fibularis longus passes as it crosses the sole of the foot to insert on the medial cuneiform and base of the first metatarsal." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cuboid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001455 ! cuboid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200056 +name: groove for middle meningeal a. of parietal bone +def: "A surface groove on the internal surface of the parietal bone that lodges the anterior and posterior branches of the middle meningeal artery as they course across the inner aspect of the calvaria, supplying the dura mater." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Parietal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000210 ! tetrapod parietal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200057 +name: groove for nasopalatine nerve of vomer +def: "A surface groove running obliquely on the anteroinferior surface of the vomer, lodging the nasopalatine nerve and accompanying vessels as they course from the nasal septum toward the incisive canal." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Vomer] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0002396 ! vomer +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200058 +name: groove for posterior deep temporal artery of squamous part of temporal bone +def: "A surface groove running vertically on the temporal surface of the squamous part of the temporal bone, lodging the posterior deep temporal artery as it ascends to supply the temporalis muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200060 +name: groove for subclavian artery of first rib +def: "A surface groove on the superior surface of the first rib, located posterior to the scalene tubercle, that lodges the subclavian artery as it passes over the rib between the anterior and middle scalene muscles. This groove is a distinctive feature of the first rib and is absent on all other ribs." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200061 +name: groove for subclavian vein of first rib +def: "A surface groove on the superior surface of the first rib, situated anterior to the scalene tubercle, that accommodates the subclavian vein as it crosses the rib. This groove lies medial to the groove for the subclavian artery and is a unique feature of the first rib, reflecting its relationship with the major vessels of the upper limb." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200062 +name: groove for superior sagittal sinus of frontal bone +def: "A surface groove on the internal surface of the frontal bone, running in the midline along the superior margin, that lodges the anterior portion of the superior sagittal sinus where it begins near the foramen cecum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Frontal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000209 ! tetrapod frontal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200063 +name: groove for superior sagittal sinus of parietal bone +def: "A surface groove running along the sagittal margin on the internal surface of the parietal bone, lodging the superior sagittal sinus as it courses posteriorly toward the confluence of sinuses at the internal occipital protuberance." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Parietal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000210 ! tetrapod parietal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200064 +name: groove for tendon of flexor hallucis longus muscle of calcaneus +def: "A surface groove running longitudinally along the inferior aspect of the sustentaculum tali of the calcaneus, through which the tendon of the flexor hallucis longus muscle passes distally toward the hallux. The tendon is held within the groove by a fibrous retinaculum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200065 +name: groove for transverse sinus of squamous part of occipital bone +def: "A surface groove curving horizontally across the internal surface of the squamous part of the occipital bone, one on each side, lodging the transverse sinus as it passes from the confluence of sinuses toward the sigmoid sinus." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Occipital_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001676 ! occipital bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200066 +name: groove for vertebral artery of first cervical vertebra +def: "A surface groove curving along the superior surface of the posterior arch of the atlas (C1), transmitting the vertebral artery and the first cervical nerve as they pass from the transverse foramen toward the foramen magnum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200067 +name: head of radius of radius +def: "A zone of bone organ forming the disc-shaped proximal end of the radius, articulating superiorly with the capitulum of the humerus and medially with the radial notch of the ulna; it is encircled by the annular ligament and enables forearm pronation and supination." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Radius_(bone)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001423 ! radius bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200068 +name: head of second distal phalanx of foot +def: "A zone of bone organ forming the distal articular end of the second distal phalanx of the foot, presenting a smooth convex surface at the tip of the second toe; it bears no distal articulation and is capped by the ungual tuberosity." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004316 ! distal phalanx of pedal digit 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200069 +name: head of second distal phalanx of hand +def: "A zone of bone organ forming the distal end of the distal phalanx of the second toe of the foot, presenting a smooth convex articular surface that articulates with the base of the middle phalanx at the proximal interphalangeal joint of the second digit." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004311 ! distal phalanx of manual digit 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200070 +name: head of second middle phalanx of foot +def: "A zone of bone organ forming the distal articular end of the middle phalanx of the second toe, presenting a pulley-shaped trochlear surface that articulates with the base of the second distal phalanx of the foot at the distal interphalangeal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004324 ! middle phalanx of pedal digit 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200071 +name: head of second middle phalanx of hand +def: "A zone of bone organ forming the distal end of the middle phalanx of the second toe of the foot, bearing a pulley-shaped (trochlear) articular surface that articulates with the base of the distal phalanx at the distal interphalangeal joint of the second digit." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004320 ! middle phalanx of manual digit 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200072 +name: head of third middle phalanx of hand +def: "A zone of bone organ forming the distal articular end of the middle phalanx of the third finger, presenting a trochlear articular surface that articulates with the base of the third distal phalanx at the distal interphalangeal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004321 ! middle phalanx of manual digit 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200073 +name: head of ulna of ulna +def: "A zone of bone organ forming the rounded distal end of the ulna, articulating with the ulnar notch of the radius via its convex articular circumference and with the triangular fibrocartilage complex on its inferior surface, participating in the distal radioulnar joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ulna] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001424 ! ulna +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200074 +name: hiatus and groove of petrous part of temporal bone for greater petrosal nerve +def: "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, through which the greater petrosal nerve emerges from the geniculate ganglion of the facial nerve (CN VII) and courses anteromedially toward the foramen lacerum and pterygoid canal." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200075 +name: hiatus and groove of petrous part of temporal bone for lesser petrosal nerve +def: "A bone foramen and associated groove on the anterior surface of the petrous part of the temporal bone, lying lateral to the hiatus for the greater petrosal nerve, through which the lesser petrosal nerve (a branch of CN IX) exits the middle ear and courses toward the foramen ovale to reach the parotid gland via the otic ganglion." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200076 +name: hyoid region bone +def: "A zone of bone organ comprising the structural regions of the hyoid bone collectively, including the body, the greater cornua, and the lesser cornua. It encompasses the full extent of this U-shaped unpaired bone situated in the anterior neck at the level of the third cervical vertebra, between the mandible and the thyroid cartilage." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hyoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0010273 ! zone of hyoid bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001685 ! hyoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200080 +name: iliac tubercle of ilium of os coxa +def: "A skeletal element projection forming a thickened prominence on the outer lip of the iliac crest of the ilium of the os coxa (innominate bone), situated approximately five centimetres posterior to the anterior superior iliac spine and serving as a palpable landmark used in clinical procedures such as lumbar puncture positioning." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200081 +name: iliac tuberosity of ilium of os coxa +def: "A skeletal element projection forming a roughened elevation on the posterior part of the medial surface of the ilium of the os coxa (innominate bone), located superior and posterior to the auricular surface, providing attachment for the posterior sacroiliac ligaments and the erector spinae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200082 +name: iliopubic ramus of os coxa +def: "A skeletal element projection forming the bony bar of the os coxa (innominate bone) that connects the body of the ilium to the pubis, constituting the superior and medial boundary of the obturator foramen and carrying the obturator groove on its inferior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200084 +name: inferior articular facet of eighth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the eighth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T9 at the zygapophyseal joint, contributing to the typical thoracic pattern of constrained rotation and limited sagittal mobility." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0011050 ! thoracic vertebra 8 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200085 +name: inferior articular facet of eleventh thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the eleventh thoracic vertebra. As T11 is a transitional vertebra, its inferior articular facets are oriented more in the sagittal plane, similar to lumbar vertebrae, and articulate with the superior articular facets of T12, permitting greater flexion-extension mobility." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004635 ! thoracic vertebra 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200086 +name: inferior articular facet of fifth cervical vertebra +def: "A zone of bone organ on the inferior articular process of the fifth cervical vertebra (C5), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C6." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004614 ! mammalian cervical vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200087 +name: inferior articular facet of fifth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the fifth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T6, forming the zygapophyseal joint at the upper-mid thoracic junction that limits flexion-extension and permits limited rotation." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004630 ! thoracic vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200088 +name: inferior articular facet of first cervical vertebra +def: "A zone of bone organ located on the inferior aspect of the lateral mass of the atlas (C1), presenting a flat to slightly concave articular surface that articulates with the superior articular facet of the axis to form the lateral atlantoaxial joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200089 +name: inferior articular facet of first thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the first thoracic vertebra, facing anteroinferiorly and articulating with the superior articular facet of T2. It is oriented in the coronal plane, characteristic of thoracic vertebrae, constraining rotation and contributing to zygapophyseal joint formation between T1 and T2." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004626 ! thoracic vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200090 +name: inferior articular facet of fourth cervical vertebra +def: "A zone of bone organ on the inferior articular process of the fourth cervical vertebra (C4), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C5." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004613 ! mammalian cervical vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200091 +name: inferior articular facet of fourth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the fourth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T5, forming the zygapophyseal joint that constrains movement between adjacent mid-upper thoracic vertebrae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004629 ! thoracic vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200092 +name: inferior articular facet of ninth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the ninth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T10, forming the zygapophyseal joint at the transitional zone where thoracic facet orientation begins to shift toward the lumbar sagittal pattern." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004633 ! thoracic vertebra 9 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200093 +name: inferior articular facet of second cervical vertebra +def: "A zone of bone organ on the inferior articular process of the axis (C2), presenting a smooth articular surface oriented in the same oblique plane as typical cervical zygapophyseal joints, articulating with the superior articular facet of the third cervical vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200094 +name: inferior articular facet of second thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the second thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T3, forming the zygapophyseal joint that limits flexion and facilitates the slight rotatory mobility characteristic of the mid-thoracic region." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004627 ! thoracic vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200095 +name: inferior articular facet of seventh cervical vertebra +def: "A zone of bone organ on the inferior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface that articulates with the superior articular facet of the first thoracic vertebra, at the cervicothoracic transition." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004616 ! mammalian cervical vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200096 +name: inferior articular facet of seventh thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the seventh thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T8, forming the zygapophyseal joint near the apex of the thoracic kyphosis where coronal facet orientation dominates." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004632 ! thoracic vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200097 +name: inferior articular facet of sixth cervical vertebra +def: "A zone of bone organ on the inferior articular process of the sixth cervical vertebra (C6), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C7." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004615 ! mammalian cervical vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200098 +name: inferior articular facet of sixth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the sixth thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T7, forming the zygapophyseal joint that contributes to stability and guides movement in the mid-thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004631 ! thoracic vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200099 +name: inferior articular facet of tenth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the tenth thoracic vertebra, facing anteroinferiorly. It articulates with the superior articular facet of T11 at the zygapophyseal joint; T10 is a transitional vertebra and its inferior facets may begin to adopt a more sagittally oriented profile approaching the lumbar pattern." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004634 ! thoracic vertebra 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200100 +name: inferior articular facet of third cervical vertebra +def: "A zone of bone organ on the inferior articular process of the third cervical vertebra (C3), presenting an obliquely oriented smooth articular surface directed anteroinferiorly and laterally to articulate with the superior articular facet of C4." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004612 ! mammalian cervical vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200101 +name: inferior articular facet of third thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the third thoracic vertebra, facing anteroinferiorly and oriented in the coronal plane. It articulates with the superior articular facet of T4, forming the zygapophyseal joint that limits axial rotation and contributes to the stability of the upper thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004628 ! thoracic vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200102 +name: inferior articular facet of twelfth thoracic vertebra +def: "A zone of bone organ located on the inferior articular process of the twelfth thoracic vertebra. T12 is the most transitional thoracic vertebra; its inferior articular facets face laterally, closely resembling the lumbar pattern, and articulate with the superior articular facets of L1 at the thoracolumbar junction." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004636 ! thoracic vertebra 12 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200103 +name: inferior articular process of first cervical vertebra +def: "A process of vertebra projecting inferiorly from the lateral mass of the atlas (C1), bearing a smooth articular facet that forms the lateral atlantoaxial joint with the superior articular process of the axis; it is positioned further anteriorly than in typical cervical vertebrae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200104 +name: inferior articular process of second cervical vertebra +def: "A process of vertebra projecting inferolaterally from the vertebral arch of the axis (C2), bearing an articular facet oriented in the typical cervical zygapophyseal plane to articulate with the superior articular process of the third cervical vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200105 +name: inferior costal facet of eleventh thoracic vertebra +def: "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It is present when T11 participates in a shared costal articulation with the head of rib 11 alongside the superior costal facet of T12; however, T11 more typically bears a single complete costal facet for the head of rib 11." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004635 ! thoracic vertebra 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200106 +name: inferior costal facet of tenth thoracic vertebra +def: "A zone of bone organ forming the inferior demi-facet on the posterolateral body of the tenth thoracic vertebra. In most individuals T10 bears a single complete costal facet rather than demifacets, but when present the inferior costal facet participates in articulation with the head of the tenth rib together with the superior costal facet of T11." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004634 ! thoracic vertebra 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200107 +name: inferior mental spine of mandible +def: "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the lower pair of genial tubercles, serving as the bilateral origin for the geniohyoid muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200108 +name: inferior nuchal line of squamous part of occipital bone +def: "A zone of bone organ forming the lower of two transverse ridges on the outer surface of the squamous occipital bone, extending laterally from the external occipital crest. It marks the attachment of the rectus capitis posterior major and minor muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Occipital_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001676 ! occipital bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200109 +name: inferior vertebral notch of first cervical vertebra +def: "A bone foramen forming the inferior indentation of the pedicle region of the atlas (C1), which together with the superior vertebral notch of C2 contributes to the boundaries of the first cervical intervertebral foramen, through which the first cervical nerve passes." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200110 +name: infraglenoid tubercle of scapula +def: "A roughened skeletal element projection situated at the inferior margin of the glenoid cavity of the scapula, serving as the origin of the long head of the triceps brachii muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200112 +name: infraspinous fossa of scapula +def: "A broad, triangular bone fossa occupying the inferior three-quarters of the posterior surface of the scapula below the scapular spine, providing the area of origin for the infraspinatus muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200113 +name: intercondylar notch of femur +def: "A bone foramen forming the deep intercondylar fossa between the medial and lateral condyles on the posterior aspect of the distal femur. It provides passage for the anterior and posterior cruciate ligaments and is partially enclosed anteriorly by the patellar surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Femur] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000981 ! femur +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200114 +name: intermediate sacral crest of sacrum +def: "A crest running longitudinally on the posterior surface of the sacrum, medial to the posterior sacral foramina, formed by the fusion of the articular processes of the sacral vertebrae and representing the homologue of the articular pillars seen in lumbar vertebrae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200115 +name: internal auditory meatus of petrous part of temporal bone +def: "A bone foramen opening on the posterior surface of the petrous part of the temporal bone, transmitting the facial nerve (CN VII), the vestibulocochlear nerve (CN VIII), and the labyrinthine artery from the posterior cranial fossa into the internal acoustic canal. Its fundus is divided into compartments by the transverse crest and Bill's bar." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200116 +name: internal occipital protuberance of squamous part of occipital bone +def: "A skeletal element projection on the internal surface of the squamous occipital bone at the center of the cruciform eminence, marking the confluence of sinuses where the superior sagittal, straight, and occipital sinuses meet." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Occipital_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001676 ! occipital bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200117 +name: interosseus border of tibia +def: "A zone of bone organ forming the sharp, prominent lateral crest of the tibial shaft, running from the fibular articular facet proximally to the anterior aspect of the fibular notch distally. It provides the tibial attachment for the crural interosseous membrane connecting the tibia and fibula throughout the length of the leg." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200118 +name: ischial body of ischium of os coxa +def: "A zone of bone organ forming the thick, upper part of the ischium of the os coxa (innominate bone), contributing the posteroinferior portion of the acetabulum superiorly and bearing the ischial spine posteriorly, and providing attachment for several hip muscles and ligaments." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200120 +name: lacrimal fossa of frontal bone +def: "A bone fossa located in the lateral part of the orbital plate of the frontal bone, forming a shallow depression just inside the anterolateral orbital rim that lodges the orbital lobe of the lacrimal gland." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Frontal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0008789 ! cranial fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000209 ! tetrapod frontal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200121 +name: lamina of first cervical vertebra +def: "A vertebra lamina forming the posterior curved plate of the atlas (C1) that completes the posterior arch, connecting the lateral masses to the posterior tubercle; it is thinner and more curved than laminae of typical cervical vertebrae, lacking a spinous process." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004662 ! vertebra lamina +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200122 +name: lamina of second cervical vertebra +def: "A vertebra lamina forming the broad, thick posterior plate of the axis (C2) neural arch, connecting the pedicles to the large bifid spinous process; it is notably robust compared with lower cervical laminae and serves as attachment for the semispinalis cervicis muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004662 ! vertebra lamina +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200123 +name: lateral process of tuberosity of calcaneus +def: "A skeletal element projection forming the smaller, more lateral of the two inferior prominences of the calcaneal tuberosity. It provides attachment for the abductor digiti minimi muscle and the lateral slip of the plantar aponeurosis." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200125 +name: lateral sacral crest of sacrum +def: "A crest running along the lateral aspect of the posterior sacral surface, lateral to the posterior sacral foramina, formed by fusion of the transverse processes of sacral vertebrae and providing attachment for the posterior sacroiliac and sacrotuberous ligaments." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200126 +name: lesser wings of sphenoid bone +def: "A zone of bone organ forming the pair of triangular horizontal plates that project laterally from the anterosuperior aspect of the sphenoid body, lying in the floor of the anterior cranial fossa and forming the roof of the orbit posteriorly; each lesser wing is connected to the body by two roots enclosing the optic canal." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200127 +name: linea terminalis of sacrum +def: "A zone of bone organ forming the sacral contribution to the linea terminalis, constituting the posterior arc of the pelvic brim and demarcating the boundary between the greater and lesser pelvis at the level of the sacral promontory and alae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200128 +name: lunate surface of os coxa +def: "A zone of bone organ forming the crescent-shaped articular cartilage-covered surface within the acetabulum of the os coxa (innominate bone), lining the peripheral rim of the acetabular socket and articulating directly with the head of the femur, with the non-articular acetabular fossa occupying the central gap." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200129 +name: mammillary process of fifth lumbar vertebra +def: "A process of vertebra located on the posterior aspect of the superior articular process of the fifth lumbar vertebra, forming the most inferior of the lumbar mammillary processes. It is especially prominent at this level, providing multifidus attachment and forming part of the lumbosacral articular region adjacent to the sacral ala." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004621 ! lumbar vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200130 +name: mammillary process of first lumbar vertebra +def: "A process of vertebra located on the posterior surface of the superior articular process of the first lumbar vertebra, presenting as a small bony tubercle. It serves as an attachment site for the multifidus muscle and marks the most superior of the lumbar mammillary processes, situated just below the thoracolumbar junction." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004617 ! lumbar vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200131 +name: mammillary process of fourth lumbar vertebra +def: "A process of vertebra projecting posteriorly from the superior articular process of the fourth lumbar vertebra as a prominent bony tubercle. It provides attachment for the multifidus muscle and, at this level, lies in close relation to the iliolumbar ligament attachments that stabilize the lower lumbar spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004620 ! lumbar vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200132 +name: mammillary process of second lumbar vertebra +def: "A process of vertebra projecting posteriorly from the superior articular process of the second lumbar vertebra as a rounded bony tubercle. It provides attachment for fibers of the multifidus muscle and is one of five paired lumbar mammillary processes that increase in prominence from L1 to L5." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004618 ! lumbar vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200133 +name: mammillary process of third lumbar vertebra +def: "A process of vertebra arising from the posterior surface of the superior articular process of the third lumbar vertebra, forming a distinct bony projection at the mid-lumbar level. It serves as an attachment point for the multifidus muscle and is situated at the level of the vertebra most accessible for posterior spinal procedures." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004619 ! lumbar vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200134 +name: mandibular angle of mandible +def: "A zone of bone organ at the postero-inferior junction of the mandibular body and ramus, providing attachment for the masseter muscle on its lateral surface and the medial pterygoid muscle on its medial surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200135 +name: mandibular foramen of mandible +def: "A bone foramen on the medial surface of the mandibular ramus, guarded anteriorly by the lingula, through which the inferior alveolar nerve and vessels enter the mandibular canal." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0013685 ! foramen of skull +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200136 +name: mandibular fossa of squamous part of temporal bone +def: "A bone fossa forming the concave articular surface on the inferior aspect of the squamous part, bounded anteriorly by the articular tubercle and posteriorly by the postglenoid tubercle and tympanic plate. It receives the condylar head of the mandible to form the temporomandibular joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200137 +name: mandibular notch of mandible +def: "A bone foramen forming the deep concavity on the superior border of the mandibular ramus between the coronoid process anteriorly and the condylar process posteriorly, through which the masseteric nerve and vessels pass to reach the masseter muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0013685 ! foramen of skull +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200138 +name: mastoid foramen of mastoid part of temporal bone +def: "A bone foramen situated on the posterior surface of the mastoid part near the occipitomastoid suture, transmitting a mastoid emissary vein that connects the sigmoid sinus intracranially with the occipital or posterior auricular veins extracranially, along with a small branch of the occipital artery." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200139 +name: mastoid notch of mastoid part of temporal bone +def: "A bone foramen forming a deep groove on the medial surface of the mastoid process, immediately medial to the mastoid process tip. It provides attachment for the posterior belly of the digastric muscle and lies lateral to the groove for the occipital artery." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200140 +name: medial malleolus of tibia +def: "A skeletal element projection forming the prominent bony process that descends from the medial aspect of the distal tibia, constituting the medial wall of the ankle mortise. Its lateral surface bears a comma-shaped articular facet for the medial surface of the talar body, and its apex and posterior groove give attachment to the deltoid ligament complex and tendons of the deep posterior compartment, respectively." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200141 +name: medial process of tuberosity of calcaneus +def: "A skeletal element projection forming the larger, more medial of the two inferior prominences of the calcaneal tuberosity. It is the principal origin of the plantar aponeurosis and provides attachment for the abductor hallucis, flexor digitorum brevis, and the plantar calcaneonavicular (spring) ligament." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200142 +name: medial pterygoid plate of sphenoid bone +def: "A zone of bone organ forming the narrower, more vertically oriented medial lamina of the pterygoid process of the sphenoid bone, curving posterolaterally at its inferior end to terminate as the pterygoid hamulus; its medial surface forms the lateral boundary of the choana and provides attachment for the pharyngeal constrictor muscles and the pterygomandibular raphe." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200143 +name: median sacral crest of sacrum +def: "A crest running in the midline on the posterior surface of the sacrum, formed by the fusion of the spinous processes of the upper sacral vertebrae, typically comprising three or four tubercles and providing attachment for the supraspinous ligament and erector spinae muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200144 +name: mental protuberance of mandible +def: "A triangular skeletal element projection forming the prominence of the bony chin at the anterior midline of the mandibular body, bounded laterally by the mental tubercles and considered a defining morphological feature of modern Homo sapiens." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200145 +name: mylohyoid groove of mandible +def: "A surface groove on the medial surface of the mandibular ramus, running obliquely anteroinferiorly from the mandibular foramen toward the body of the mandible, in which the mylohyoid nerve and accompanying vessels travel." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200146 +name: mylohyoid line of mandible +def: "A diagonal bony ridge forming a zone of bone organ on the internal surface of the mandibular body, extending from below the last molar tooth posteriorly to the mental spine anteriorly, providing origin for the mylohyoid muscle and attachment for the pterygomandibular raphe." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200147 +name: nasolacrimal canal of maxilla +def: "A bone foramen forming a canal between the maxilla, lacrimal bone, and inferior nasal concha that transmits the nasolacrimal duct from the lacrimal sac in the medial orbit inferiorly to open into the inferior meatus of the nasal cavity." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Maxilla] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0013685 ! foramen of skull +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0002397 ! maxilla +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200148 +name: neck of radius of radius +def: "A zone of bone organ comprising the short, constricted segment of the radius immediately distal to the head, connecting the head to the radial tuberosity and serving as the site of attachment of the annular ligament." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Radius_(bone)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001423 ! radius bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200149 +name: non-articular facet of tubercle of eighth rib +def: "A skeletal element projection forming the rough, lateral portion of the tubercle of the eighth rib that provides attachment for the lateral costotransverse ligament. It is distinct from the smooth medial articular facet and is directed posteriorly and inferiorly, becoming increasingly lateral in position as rib number increases." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0010757 ! rib 8 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200150 +name: non-articular facet of tubercle of fifth rib +def: "A skeletal element projection forming the roughened, non-articular area on the lateral aspect of the tubercle of the fifth rib that serves as the attachment site for the lateral costotransverse ligament. It is separated from the smooth medial articular facet and faces posteriorly." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004605 ! rib 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200151 +name: non-articular facet of tubercle of first rib +def: "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the first rib that provides attachment for the costotransverse ligament. In the first rib the tubercle is prominent on the superior surface, and its non-articular facet is directed posteriorly toward the transverse process of the first thoracic vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200152 +name: non-articular facet of tubercle of fourth rib +def: "A skeletal element projection forming the rough, lateral portion of the tubercle of the fourth rib that anchors the lateral costotransverse ligament. It lies adjacent to but distinct from the smooth articular facet and is directed posteriorly toward the transverse process of the fourth thoracic vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004604 ! rib 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200153 +name: non-articular facet of tubercle of ninth rib +def: "A skeletal element projection constituting the roughened lateral area of the tubercle of the ninth rib that affords attachment for the lateral costotransverse ligament. It faces increasingly posterolaterally compared with upper ribs, reflecting the gradually changing orientation of the costotransverse articulation." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004608 ! rib 9 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200154 +name: non-articular facet of tubercle of second rib +def: "A skeletal element projection forming the rough, non-articular portion of the tubercle of the second rib that provides attachment for the lateral costotransverse ligament. It is adjacent to the articular facet and faces posteriorly toward the transverse process of the second thoracic vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004602 ! rib 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200155 +name: non-articular facet of tubercle of seventh rib +def: "A skeletal element projection constituting the roughened, non-articular region of the tubercle of the seventh rib that serves as the insertion point for the lateral costotransverse ligament. It is situated lateral to the articular facet and is directed posterolaterally." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004607 ! rib 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200156 +name: non-articular facet of tubercle of sixth rib +def: "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the sixth rib that provides attachment for the lateral costotransverse ligament. It occupies the lateral part of the tubercle, distinct from the smooth medial articular facet, and faces posterolaterally." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004606 ! rib 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200157 +name: non-articular facet of tubercle of tenth rib +def: "A skeletal element projection forming the rough, non-articular area on the tubercle of the tenth rib that provides attachment for the costotransverse ligament. The tenth rib is transitional in character, and its tubercle is less prominent than in upper ribs, with the non-articular facet directed more laterally." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004609 ! rib 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200158 +name: non-articular facet of tubercle of third rib +def: "A skeletal element projection forming the roughened, non-articular portion of the tubercle of the third rib that anchors the lateral costotransverse ligament. It lies on the lateral aspect of the tubercle adjacent to the smooth articular facet and faces posteriorly toward the transverse process of the third thoracic vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004603 ! rib 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200160 +name: obturator groove of pubis of os coxa +def: "A surface groove forming the oblique channel running along the inferior surface of the superior pubic ramus of the pubis of the os coxa (innominate bone), roofed by the obturator membrane to form the obturator canal through which the obturator nerve and vessels pass from the pelvis to the thigh." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200164 +name: olfactory foramina of ethmoid bone +def: "A bone foramen comprising the multiple small perforations of the cribriform plate through which the olfactory nerve filaments (fila olfactoria) pass from the olfactory mucosa of the nasal roof to the olfactory bulb in the anterior cranial fossa." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ethmoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0018415 ! ethmoid foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001679 ! ethmoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200166 +name: pecten pubis of pubis of os coxa +def: "A zone of bone organ forming the sharp, ridge-like superior border of the superior pubic ramus of the pubis of the os coxa (innominate bone), extending from the pubic tubercle to the iliopectineal eminence and forming part of the pelvic brim, with the pectineus muscle attaching to its anterior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200167 +name: pectinal line of femur +def: "A zone of bone organ forming a raised ridge on the posterior surface of the proximal femoral shaft, running obliquely from the base of the lesser trochanter to the medial lip of the linea aspera. It serves as the insertion site for the pectineus muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Femur] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000981 ! femur +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200168 +name: pedicle of first cervical vertebra +def: "A pedicle of vertebra forming the short lateral strut of the atlas (C1) connecting the lateral mass to the anterior and posterior arches; it is broad and low, bearing the superior and inferior vertebral notches that contribute to the first and second cervical intervertebral foramina." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0001078 ! pedicle of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200169 +name: pedicle of second cervical vertebra +def: "A pedicle of vertebra forming the robust lateral pillar of the axis (C2) connecting the vertebral body to the vertebral arch; it is directed obliquely and bears the superior vertebral notch on its upper surface, contributing to the second cervical intervertebral foramen." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0001078 ! pedicle of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200170 +name: perpendicular plate of ethmoid bone +def: "A zone of bone organ forming a thin, flat, vertical midline lamina that descends from the cribriform plate to articulate inferiorly with the septal cartilage and the vomer, contributing to the bony nasal septum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ethmoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001679 ! ethmoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200171 +name: petrotympanic fissure of squamous part of temporal bone +def: "A bone foramen forming a narrow fissure between the tympanic and squamous parts of the temporal bone at the anterior wall of the mandibular fossa. It transmits the chorda tympani branch of the facial nerve and the anterior tympanic branch of the maxillary artery into the infratemporal fossa." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200172 +name: posterior arch of first cervical vertebra +def: "An arch of atlas forming the posterior curved bar of the ring-shaped atlas (C1), connecting the two lateral masses posteriorly; it bears the posterior tubercle at its midpoint and carries the groove for the vertebral artery on its superior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005814 ! arch of atlas +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200173 +name: posterior clinoid process of sphenoid bone +def: "A skeletal element projection situated at each superolateral angle of the dorsum sellae of the sphenoid bone, projecting anterolaterally; it provides attachment for the tentorium cerebelli and the petrosphenoidal ligament, and serves as a landmark for the abducens nerve as it bends over the petrous apex." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200174 +name: posterior gluteal line of ilium of os coxa +def: "A zone of bone organ forming a curved ridge near the posterior margin of the gluteal surface of the ilium of the os coxa (innominate bone), extending from the iliac crest toward the greater sciatic notch and demarcating the small posterior area of origin of the gluteus maximus from the larger area of the gluteus medius." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200175 +name: posterior sacral foramina of sacrum +def: "A bone foramen located on the dorsal surface of the sacrum; one of four pairs of openings that transmit the dorsal rami of the upper four sacral spinal nerves, which supply the multifidus muscle and the skin over the lower back." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200177 +name: postglenoid tubercle of squamous part of temporal bone +def: "A skeletal element projection forming a small eminence immediately posterior to the mandibular fossa on the inferior surface of the squamous part. It constitutes the posterior boundary of the articular surface of the temporomandibular joint and abuts the tympanic plate." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200179 +name: pterygoid fossa of sphenoid bone +def: "A bone fossa formed by the concave medial surface of the lateral pterygoid plate facing the pterygoid process, situated between the lateral and medial pterygoid plates of the sphenoid bone; it provides origin for the medial pterygoid muscle and the lower belly of the lateral pterygoid muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200180 +name: pterygoid fovea of mandible +def: "A small roughened zone of bone organ on the anterior surface of the mandibular neck, just inferior to the articular surface of the condyle, serving as the insertion for the lateral pterygoid muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200181 +name: pterygoid hamulus of sphenoid bone +def: "A skeletal element projection forming the slender, hook-like inferior tip of the medial pterygoid plate of the sphenoid bone, curving laterally and inferiorly; it serves as a pulley around which the tendon of the tensor veli palatini muscle turns before spreading into the soft palate." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sphenoid_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001677 ! sphenoid bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200182 +name: pubic body of pubis of os coxa +def: "A zone of bone organ forming the flattened, medial main portion of the pubis of the os coxa (innominate bone), presenting a medial symphyseal surface that articulates with the contralateral pubic body at the pubic symphysis and a superior surface bearing the pubic crest and pubic tubercle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200183 +name: pubic crest of pubis of os coxa +def: "A crest forming the thick, rough, horizontal ridge on the superior surface of the pubic body of the pubis of the os coxa (innominate bone), extending medially from the pubic tubercle to the pubic symphysis and providing attachment for the rectus abdominis and pyramidalis muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200185 +name: pubic tubercle of pubis of os coxa +def: "A skeletal element projection forming a small but prominent rounded eminence on the superior border of the pubic body of the pubis of the os coxa (innominate bone), situated lateral to the pubic symphysis and serving as the medial attachment of the inguinal ligament and a landmark for the superficial inguinal ring." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Hip_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001272 ! innominate bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200186 +name: radial fossa of humerus +def: "A bone fossa situated on the anterior surface of the lateral distal humerus, immediately superior to the capitulum, that receives the anterior rim of the head of the radius during full flexion of the elbow at the humeroradial joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Humerus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000976 ! humerus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200187 +name: radial groove of humerus +def: "A surface groove spiraling obliquely across the posterior surface of the humeral shaft from the medial to the lateral side, separating the origins of the medial and lateral heads of the triceps brachii. It transmits the radial nerve and the deep brachial artery, and is also termed the musculospiral groove." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Humerus] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006846 ! surface groove +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000976 ! humerus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200188 +name: radial tuberosity of radius +def: "A skeletal element projection forming the oval, roughened eminence on the medial aspect of the radius just distal to the neck, serving as the distal insertion point of the biceps brachii tendon." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Radius_(bone)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001423 ! radius bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200189 +name: sacral apex of sacrum +def: "A zone of bone organ constituting the narrow, tapered inferior extremity of the sacrum, bearing a small oval facet that articulates with the base of the coccyx at the sacrococcygeal symphysis." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200190 +name: sacral canal of sacrum +def: "A bone foramen forming the continuation of the vertebral canal within the sacrum, running the full length of the bone and enclosing the cauda equina, the filum terminale, and the meningeal coverings of the spinal cord, communicating inferiorly with the exterior through the sacral hiatus." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200191 +name: sacral cornu of sacrum +def: "A skeletal element projection at the inferior margin of the sacral hiatus, one of a pair of downward-projecting bony processes representing the inferior articular processes of S5 that articulate with the coccygeal cornua and serve as palpable landmarks for caudal epidural anaesthesia." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200192 +name: sacral hiatus of sacrum +def: "A bone foramen forming the inferior opening of the sacral canal, resulting from the failure of fusion of the laminae of S4 and S5, and bounded laterally by the sacral cornua; it provides clinical access to the epidural space for caudal anaesthetic injections." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200193 +name: sacral promontory of sacrum +def: "A zone of bone organ constituting the prominent anterior projection of the superior surface of S1, forming the posteriormost point of the pelvic inlet and an important obstetric landmark used in measuring the diagonal conjugate diameter of the pelvis." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200194 +name: sacral spine of sacrum +def: "A skeletal element projection on the dorsal surface of the sacrum representing a discrete spinous tubercle derived from a sacral spinous process, contributing to the median sacral crest and serving as an attachment point for the posterior sacral ligaments and deep back muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200195 +name: sacral tuberosity of sacrum +def: "A skeletal element projection forming a rough, irregular eminence on the lateral aspect of the posterior sacral surface, superior to the auricular surface, that provides attachment for the interosseous and posterior sacroiliac ligaments binding the sacrum to the ilium." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sacrum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0003690 ! fused sacrum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200196 +name: scalene tubercle of first rib +def: "A skeletal element projection on the superior surface of the first rib, situated between the groove for the subclavian vein anteriorly and the groove for the subclavian artery posteriorly, that serves as the insertion of the anterior scalene muscle. It is a prominent surgical landmark unique to the first rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200197 +name: scaphoid tubercle of scaphoid +def: "A skeletal element projection on the palmar surface of the scaphoid bone at its distal pole, forming the lateral pillar of the carpal tunnel and serving as an attachment point for the flexor retinaculum and the abductor pollicis brevis muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200198 +name: scapular notch of scapula +def: "A semicircular bone foramen on the superior border of the scapula, medial to the base of the coracoid process, through which the suprascapular nerve passes beneath the superior transverse scapular ligament to enter the supraspinous fossa." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200199 +name: scapular spine of scapula +def: "A prominent, triangular skeletal element projection arising from the posterior surface of the scapula and running obliquely from the medial border to the acromion, dividing the posterior scapular surface into the supraspinous and infraspinous fossae and providing attachment for the trapezius and deltoid muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200201 +name: shaft of first distal phalanx of hand +def: "A zone of bone organ comprising the flattened, tapering body of the distal phalanx of the thumb, lying between the base and the ungual tuberosity and providing dorsal and palmar surfaces for attachment of the nail bed and soft tissue pulp." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004337 ! distal phalanx of manual digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200202 +name: shaft of first proximal phalanx of hand +def: "A zone of bone organ comprising the elongated cylindrical body of the proximal phalanx of the thumb, connecting the base to the head and providing attachment surfaces for the flexor and extensor tendons of the thumb." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004338 ! proximal phalanx of manual digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200203 +name: shaft of radius of radius +def: "A zone of bone organ comprising the elongated body of the radius between the radial tuberosity proximally and the distal epiphysis, prismatic in cross-section with a sharp interosseous border medially that gives attachment to the interosseous membrane." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Radius_(bone)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001423 ! radius bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200204 +name: shaft of ulna of ulna +def: "A zone of bone organ comprising the elongated body of the ulna between the coronoid process proximally and the head distally, triangular in cross-section with a sharp lateral interosseous border that provides attachment for the interosseous membrane." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ulna] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001424 ! ulna +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200205 +name: soleal line of tibia +def: "A zone of bone organ forming an oblique ridge on the posterior surface of the proximal tibial shaft, running from the fibular facet of the lateral condyle downward and medially to the medial border of the tibia. It marks the proximal attachment of the soleus muscle and the transverse intermuscular septum separating the superficial and deep posterior compartments of the leg." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200206 +name: spinous process of first cervical vertebra +def: "A neural spine reduced to a small posterior tubercle on the posterior arch of the atlas (C1), representing a vestigial spinous process that lacks the bifid tip seen in typical cervical vertebrae and serves as attachment for the ligamentum nuchae and the rectus capitis posterior minor muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0001076 ! neural spine +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200207 +name: spinous process of second cervical vertebra +def: "A neural spine projecting posteriorly and inferiorly from the vertebral arch of the axis (C2), characteristically large and bifid at its tip, serving as a palpable landmark and providing attachment for the ligamentum nuchae, semispinalis cervicis, and inferior oblique capitis muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0001076 ! neural spine +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200208 +name: sternal angle of sternum +def: "A zone of bone organ forming the transverse ridge on the anterior surface of the sternum at the manubriosternal junction, palpable as a distinct anterior angulation; it lies at the level of the second costal cartilage and marks the plane separating the superior from the inferior mediastinum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sternum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000975 ! sternum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200209 +name: sternal end of eighth rib +def: "A zone of bone organ forming the anterior extremity of the eighth rib, which connects to the costal cartilage of the eighth rib. The costal cartilage of the eighth rib does not attach directly to the sternum but joins the cartilage of the seventh rib, making the eighth rib a false rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0010757 ! rib 8 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200210 +name: sternal end of eleventh rib +def: "A zone of bone organ forming the pointed anterior extremity of the eleventh rib that tapers to a tip covered by a small cap of hyaline cartilage. As a floating rib, the eleventh rib does not connect to the sternum or to the costal arch, and its sternal end is free within the abdominal musculature." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004610 ! rib 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200211 +name: sternal end of fifth rib +def: "A zone of bone organ forming the anterior extremity of the fifth rib that articulates with the costal cartilage of the fifth rib. The costal cartilage of the fifth rib connects to the sternum at the level of the xiphosternal junction, making the fifth rib a true rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004605 ! rib 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200212 +name: sternal end of first rib +def: "A zone of bone organ forming the medial extremity of the first rib that articulates with a broad, flat costal cartilage. The costal cartilage of the first rib has a primary cartilaginous joint with the manubrium of the sternum, and the sternal end of the first rib is widened and flattened, consistent with the flat, horizontal orientation of the rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004601 ! rib 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200213 +name: sternal end of fourth rib +def: "A zone of bone organ forming the anterior extremity of the fourth rib that connects to the costal cartilage of the fourth rib. The fourth rib is a true rib whose costal cartilage articulates directly with the lateral border of the sternum, typically at the level of the sternal angle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004604 ! rib 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200214 +name: sternal end of ninth rib +def: "A zone of bone organ forming the anterior extremity of the ninth rib, which connects to its costal cartilage. The costal cartilage of the ninth rib joins the costal arch formed by the cartilages of ribs seven through ten, so the ninth rib does not reach the sternum directly and is classified as a false rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004608 ! rib 9 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200215 +name: sternal end of second rib +def: "A zone of bone organ forming the anterior extremity of the second rib that connects to the costal cartilage of the second rib. The second rib is a true rib whose costal cartilage articulates with the sternum at the sternal angle (angle of Louis), the junction between the manubrium and the body of the sternum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004602 ! rib 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200216 +name: sternal end of seventh rib +def: "A zone of bone organ forming the anterior extremity of the seventh rib that connects to its costal cartilage. The seventh rib is the lowest true rib, and its costal cartilage typically articulates directly with the inferior end of the body of the sternum at or near the xiphosternal junction." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004607 ! rib 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200217 +name: sternal end of sixth rib +def: "A zone of bone organ forming the anterior extremity of the sixth rib that connects to the costal cartilage of the sixth rib. The sixth rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004606 ! rib 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200218 +name: sternal end of tenth rib +def: "A zone of bone organ forming the anterior extremity of the tenth rib, which ends in a small cap of cartilage that fuses with the costal arch rather than attaching independently to the sternum. The tenth rib is a false rib and, together with ribs eight and nine, contributes to the inferior costal margin." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004609 ! rib 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200219 +name: sternal end of third rib +def: "A zone of bone organ forming the anterior extremity of the third rib that connects to the costal cartilage of the third rib. The third rib is a true rib whose costal cartilage articulates with the lateral border of the body of the sternum between the second and fourth costal notches." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004603 ! rib 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200220 +name: sternal end of twelfth rib +def: "A zone of bone organ forming the pointed free anterior extremity of the twelfth rib that terminates in a small cartilaginous tip. As the lowest floating rib, the twelfth rib does not connect to the sternum or costal arch, and its sternal end lies within the posterior abdominal wall musculature posterior to the kidney." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Rib] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004611 ! rib 12 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200221 +name: sternal region bone +def: "A zone of bone organ encompassing the full extent of the sternum as the flat, elongated bone forming the midline of the anterior thoracic wall, comprising the manubrium, body, and xiphoid process, and providing articular surfaces for the clavicles and costal cartilages of ribs 1–7 as well as attachment for thoracic and abdominal muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sternum] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000975 ! sternum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200222 +name: stylomastoid foramen of petrous part of temporal bone +def: "A bone foramen located on the inferior surface of the petrous part of the temporal bone between the base of the styloid process and the mastoid process. It is the point of exit of the facial nerve (CN VII) from the facial canal into the parotid region." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200223 +name: sublingual fossa of mandible +def: "A smooth bone fossa on the medial surface of the mandibular body, superior to the mylohyoid line anteriorly, in which the sublingual salivary gland is lodged." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200224 +name: submandibular fossa of mandible +def: "A bone fossa on the medial surface of the mandibular body and ramus, inferior to the mylohyoid line and posterior to the sublingual fossa, in which the superficial part of the submandibular salivary gland is accommodated." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200225 +name: supercilary arch of frontal bone +def: "A zone of bone organ forming a curved bony ridge on the external surface of the frontal bone, arching above each orbit immediately superior to the supraorbital margin. It overlies the frontal sinus and is more prominent in males." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Frontal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000209 ! tetrapod frontal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200226 +name: superior articular facet of eighth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the eighth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T7 at the zygapophyseal joint, contributing to the paired synovial joints that guide movement in the lower mid-thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0011050 ! thoracic vertebra 8 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200227 +name: superior articular facet of eleventh thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the eleventh thoracic vertebra, oriented in the coronal plane and facing posteriorly. It articulates with the inferior articular facet of T10 at the zygapophyseal joint; T11 is a transitional vertebra where facet morphology begins the shift toward the lumbar sagittal pattern." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:322074 -is_a: UBERON:0000315 {source="FMA"} ! subarachnoid space -intersection_of: UBERON:0000315 ! subarachnoid space -intersection_of: part_of UBERON:0002240 ! spinal cord -relationship: part_of UBERON:0002240 ! spinal cord +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004635 ! thoracic vertebra 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039185 -name: accessory vertebral vein -def: "A lower continuation of the vertebral vein and vertebral venous plexus that passes through the foramen of the transverse process of the 7th cervical vertebra and empties into the brachiocephalic vein." [https://www.imaios.com/en/e-Anatomy/Anatomical-Parts/Accessory-vertebral-vein] +id: UBERON:1200228 +name: superior articular facet of fifth cervical vertebra +def: "A zone of bone organ on the superior articular process of the fifth cervical vertebra (C5), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C4 within the zygapophyseal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:14290 -is_a: UBERON:0001638 ! vein -relationship: part_of UBERON:0001588 ! vertebral vein -relationship: tributary_of UBERON:0003711 {source="FMA"} ! brachiocephalic vein +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004614 ! mammalian cervical vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039186 -name: anterior vertebral vein -def: "A vein that commences in a plexus around the transverse processes of the upper cervical vertebræ, descends in company with the ascending cervical artery between the Scalenus anterior and Longus capitis muscles, and opens into the terminal part of the vertebral vein." [https://www.imaios.com/en/e-Anatomy/Anatomical-Parts/Anterior-vertebral-vein] +id: UBERON:1200229 +name: superior articular facet of fifth lumbar vertebra +def: "A zone of bone organ forming the articular surface on the superior articular process of the fifth lumbar vertebra, with a concave, medially facing surface oriented in the sagittal plane. It articulates with the inferior articular facet of the fourth lumbar vertebra at the L4–L5 zygapophyseal joint, the most commonly affected lumbar facet joint in degenerative disease." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:14296 -is_a: UBERON:0001638 ! vein -relationship: part_of UBERON:0001588 ! vertebral vein -relationship: tributary_of UBERON:0001588 ! vertebral vein +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004621 ! lumbar vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039187 -name: suprascapular vein -def: "The suprascapular vein is a vein running above the scapula. It empties into the external jugular vein." [https://en.wikipedia.org/wiki/Suprascapular_vei] +id: UBERON:1200230 +name: superior articular facet of fifth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the fifth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T4 at the zygapophyseal joint, contributing to the segmental stability of the mid-upper thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:14319 -is_a: UBERON:0001638 ! vein -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0001101 {source="FMA"} ! external jugular vein +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004630 ! thoracic vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039188 -name: superior laryngeal vein -def: "The superior laryngeal vein is a vein which drains the larynx into the superior thyroid vein." [https://en.wikipedia.org/wiki/Superior_laryngeal_vein] +id: UBERON:1200231 +name: superior articular facet of first cervical vertebra +def: "A zone of bone organ located on the superior surface of the lateral mass of the atlas (C1), presenting a kidney-shaped, concave articular surface directed superiorly and medially to receive the occipital condyle, forming the atlanto-occipital joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:14324 -is_a: UBERON:0001638 ! vein -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0007157 {source="FMA"} ! superior thyroid vein +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039215 -name: appendicular artery -def: "An artery that commonly arises from the terminal branch of the ileocolic artery, or less commonly from the posterior cecal artery or an ileal artery.[1][2] It descends behind the termination of the ileum and enters the mesoappendix of the vermiform appendix. It runs near the free margin of the mesoappendix and ends in branches which supply the appendix." [https://en.wikipedia.org/wiki/Appendicular_artery] +id: UBERON:1200232 +name: superior articular facet of first lumbar vertebra +def: "A zone of bone organ forming the articular surface on the superior articular process of the first lumbar vertebra, oriented in the sagittal plane with a concave, medially facing articular surface. It articulates with the inferior articular facet of the twelfth thoracic vertebra, forming the uppermost zygapophyseal joint of the lumbar column." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "appendiceal artery" EXACT [FMA:14818] -xref: FMA:14818 -is_a: UBERON:0001637 ! artery -relationship: connecting_branch_of UBERON:0001197 ! ileocolic artery -relationship: part_of RO:0002577 ! system -relationship: vessel_supplies_blood_to UBERON:0001154 {source="FMA"} ! vermiform appendix +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004617 ! lumbar vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039222 -name: cystic artery -def: "An artery that supplies oxygenated blood to the cystic duct." [http://orcid.org/0000-0002-6601-2165, https://en.wikipedia.org/wiki/Cystic_artery] +id: UBERON:1200233 +name: superior articular facet of first thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the first thoracic vertebra, facing posteriorly and slightly superiorly. It articulates with the inferior articular facet of C7 at the cervicothoracic junction, where facet orientation transitions from the more horizontal cervical pattern to the coronal thoracic pattern." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "cholecystic artery" EXACT [FMA:14835] -xref: FMA:14835 -is_a: UBERON:0001637 ! artery -is_a: UBERON:0015796 ! liver blood vessel -intersection_of: UBERON:0001637 ! artery -intersection_of: vessel_supplies_blood_to UBERON:0001152 ! cystic duct -relationship: part_of UBERON:0015482 {source="FMA", source="Wikipedia"} ! right hepatic artery -relationship: vessel_supplies_blood_to UBERON:0001152 ! cystic duct -property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.3/assets/3d-vh-f-blood-vasculature.glb" xsd:anyURI -property_value: depiction "https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.3/assets/3d-vh-m-blood-vasculature.glb" xsd:anyURI +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004626 ! thoracic vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039228 -name: sigmoid vein +id: UBERON:1200234 +name: superior articular facet of fourth cervical vertebra +def: "A zone of bone organ on the superior articular process of the fourth cervical vertebra (C4), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C3 within the zygapophyseal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:15395 -is_a: UBERON:0001638 ! vein -intersection_of: UBERON:0001638 ! vein -intersection_of: vessel_drains_blood_from UBERON:0001159 ! sigmoid colon -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0001215 {source="FMA"} ! inferior mesenteric vein -relationship: vessel_drains_blood_from UBERON:0001159 ! sigmoid colon +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004613 ! mammalian cervical vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039230 -name: prepyloric vein -def: "The prepyloric vein is the last connecting branch onto the right gastric vein, marking the end of the stomach, and draining the proximal part of the duodenum" [https://en.wikipedia.org/wiki/Right_gastric_vein#Structure] +id: UBERON:1200235 +name: superior articular facet of fourth lumbar vertebra +def: "A zone of bone organ comprising the concave, medially facing articular surface on the superior articular process of the fourth lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the third lumbar vertebra, contributing to the L3–L4 zygapophyseal joint, which bears significant compressive and shear loads in the lower lumbar spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "Mayo's vein" EXACT [FMA:15404] -xref: FMA:15404 -is_a: UBERON:0001638 ! vein +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004620 ! lumbar vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039232 -name: conus artery -def: "The conus artery is generally considered to be the first branch of the right coronary artery (RCA) in the right sinus of Valsalva. However, one study has shown that in approximately 50% of humans, the conus artery arises from a discrete ostium in the right sinus of Valsalva." [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4805038] -subset: human_reference_atlas +id: UBERON:1200236 +name: superior articular facet of fourth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the fourth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T3 at the zygapophyseal joint, forming one of the paired intervertebral articulations that limit flexion and rotation in the upper thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "second right coronary artery" EXACT [FMA:15736] -synonym: "third coronary artery" EXACT [FMA:15736] -xref: FMA:15736 -is_a: UBERON:0001621 {source="FMA"} ! coronary artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004629 ! thoracic vertebra 4 relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039256 -name: pubic vein -def: "vein ascending the posterior aspect of the body of the pubis to drain into the inferior epigastric vein; this vein frequently (about 20% of patients) serves as an accessory or replaced obturator vein." [https://medical-dictionary.thefreedictionary.com/pubic+vein] +id: UBERON:1200237 +name: superior articular facet of ninth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the ninth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T8 at the zygapophyseal joint in the lower thoracic spine, where the typical thoracic coronal facet orientation is maintained." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "accessory obturator vein" EXACT [FMA:21200, https://medical-dictionary.thefreedictionary.com/pubic+vein] -synonym: "pubic branch" EXACT [FMA:21200] -synonym: "pubic branch of inferior epigastric vein" EXACT [https://medical-dictionary.thefreedictionary.com/pubic+vein] -xref: FMA:21200 -is_a: UBERON:0001638 ! vein -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0001316 {source="FMA"} ! external iliac vein +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004633 ! thoracic vertebra 9 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039258 -name: external vertebral venous plexus +id: UBERON:1200238 +name: superior articular facet of second cervical vertebra +def: "A zone of bone organ on the flat, laterally oriented superior articular process of the axis (C2), presenting an oval convex articular surface that faces superiorly and laterally to articulate with the inferior articular facet of the atlas in the lateral atlantoaxial joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "plexus venosus vertebralis externus" EXACT [FMA:12851] -xref: FMA:12851 -is_a: UBERON:0039259 ! vertebral venous plexus +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039259 -name: vertebral venous plexus +id: UBERON:1200239 +name: superior articular facet of second lumbar vertebra +def: "A zone of bone organ comprising the concave, medially facing articular surface borne on the superior articular process of the second lumbar vertebra, oriented in the sagittal plane. It articulates with the inferior articular facet of the first lumbar vertebra, forming the L1–L2 zygapophyseal joint and resisting rotational forces in the lumbar spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:18935 -is_a: UBERON:0001593 {source="FMA"} ! venous plexus +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004618 ! lumbar vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039260 -name: thyrocervical artery +id: UBERON:1200240 +name: superior articular facet of second thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the second thoracic vertebra, facing posteriorly and oriented predominantly in the coronal plane. It articulates with the inferior articular facet of T1 at the zygapophyseal joint, guiding movement and limiting axial rotation in the upper thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:70346 -is_a: UBERON:0004573 ! systemic artery -relationship: part_of UBERON:0001533 {source="FMA"} ! subclavian artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004627 ! thoracic vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039261 -name: pancreatic artery +id: UBERON:1200241 +name: superior articular facet of seventh cervical vertebra +def: "A zone of bone organ on the superior articular process of the seventh cervical vertebra (C7), presenting a smooth articular surface directed posterosuperiorly to articulate with the inferior articular facet of C6, similar in orientation to other lower cervical zygapophyseal facets." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:70471 -is_a: UBERON:0001637 ! artery -intersection_of: UBERON:0001637 ! artery -intersection_of: vessel_supplies_blood_to UBERON:0001264 ! pancreas -relationship: connecting_branch_of UBERON:0001194 ! splenic artery -relationship: part_of RO:0002577 ! system -relationship: vessel_supplies_blood_to UBERON:0001264 ! pancreas +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004616 ! mammalian cervical vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039262 -name: segmental pulmonary artery +id: UBERON:1200242 +name: superior articular facet of seventh thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the seventh thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T6 at the zygapophyseal joint near the apex of the thoracic kyphosis, where coronal facet orientation maximally constrains axial rotation." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "segmental pulmonary arterial tree" EXACT [FMA:8755] -xref: FMA:8755 -is_a: UBERON:0002012 {source="FMA"} ! pulmonary artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004632 ! thoracic vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039267 -name: obsolete deep vein of penis -comment: obsoleted as believed to be equivalent to deep dorsal bein -xref: FMA:0329307 -is_obsolete: true -replaced_by: UBERON:0006656 +id: UBERON:1200243 +name: superior articular facet of sixth cervical vertebra +def: "A zone of bone organ on the superior articular process of the sixth cervical vertebra (C6), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C5 within the zygapophyseal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004615 ! mammalian cervical vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039288 -name: rima vulvae -def: "The fissure between the labia majora" [https://www.thefreedictionary.com/pudendal+cleft] +id: UBERON:1200244 +name: superior articular facet of sixth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the sixth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T5 at the zygapophyseal joint, contributing to spinal stability at a level near the thoracic kyphotic apex." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "pudendal cleft" EXACT DEPRECATED [doi:10.1002/ca.23705, FMA:19995] -synonym: "rima pudendi" EXACT OMO:0003011 [A09.2.01.006, doi:10.1002/ca.23705] -synonym: "urogenital cleft" BROAD [https://www.thefreedictionary.com/pudendal+cleft] -synonym: "vulvar slit" EXACT [https://www.thefreedictionary.com/pudendal+cleft] -xref: FMA:19995 -is_a: UBERON:0000464 ! anatomical space -relationship: adjacent_to UBERON:0004085 ! labium majora -relationship: part_of UBERON:0000997 ! mammalian vulva +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004631 ! thoracic vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039300 -name: obsolete male pudendum -xref: FMA:20461 -is_obsolete: true {source="doi:10.1002/ca.23705"} +id: UBERON:1200245 +name: superior articular facet of tenth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the tenth thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T9 at the zygapophyseal joint; T10 represents the beginning of the lower thoracic transitional region where facet orientation starts to shift." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004634 ! thoracic vertebra 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039302 -name: obsolete pudendum -xref: FMA:20463 -is_obsolete: true {source="doi:10.1002/ca.23705"} +id: UBERON:1200246 +name: superior articular facet of third cervical vertebra +def: "A zone of bone organ on the superior articular process of the third cervical vertebra (C3), presenting a smooth, obliquely oriented articular surface directed posterosuperiorly and medially to articulate with the inferior articular facet of C2 within the zygapophyseal joint." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004612 ! mammalian cervical vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039351 -name: posterior labial artery +id: UBERON:1200247 +name: superior articular facet of third lumbar vertebra +def: "A zone of bone organ forming the concave articular surface on the superior articular process of the third lumbar vertebra, oriented predominantly in the sagittal plane and facing medially. It articulates with the inferior articular facet of the second lumbar vertebra at the L2–L3 zygapophyseal joint, the most mobile segment in the mid-lumbar region." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "posterior labial branch of internal pudendal artery" EXACT [FMA:20886] -xref: FMA:20886 -is_a: UBERON:0001637 ! artery -relationship: connecting_branch_of UBERON:0001358 {source="FMA"} ! perineal artery -relationship: part_of RO:0002577 ! system +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004619 ! lumbar vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039355 -name: urethral artery +id: UBERON:1200248 +name: superior articular facet of third thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the third thoracic vertebra, facing posteriorly and oriented in the coronal plane. It articulates with the inferior articular facet of T2 at the zygapophyseal joint, contributing to the stability and constrained mobility characteristic of the upper thoracic column." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "arteria urethralis" EXACT OMO:0003011 [A12.2.15.042] -xref: FMA:20903 -is_a: UBERON:0001637 ! artery -intersection_of: UBERON:0001637 ! artery -intersection_of: vessel_supplies_blood_to UBERON:0000057 ! urethra -relationship: part_of RO:0002577 ! system -relationship: vessel_supplies_blood_to UBERON:0000057 ! urethra +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004628 ! thoracic vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039376 -name: penile bulb vein +id: UBERON:1200249 +name: superior articular facet of twelfth thoracic vertebra +def: "A zone of bone organ located on the superior articular process of the twelfth thoracic vertebra, facing posteriorly and oriented in the coronal or slightly oblique plane. It articulates with the inferior articular facet of T11; T12 is markedly transitional and its superior facets retain the thoracic orientation while the inferior facets adopt the lumbar pattern." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "bulb of penis vein" EXACT [FMA:21267] -synonym: "vena bulbi penis" EXACT [FMA:21267] -xref: FMA:21267 -is_a: UBERON:0001638 ! vein -intersection_of: UBERON:0001638 ! vein -intersection_of: vessel_drains_blood_from UBERON:0013128 ! bulb of penis -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0018252 {source="FMA"} ! internal pudendal vein -relationship: vessel_drains_blood_from UBERON:0013128 ! bulb of penis +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004636 ! thoracic vertebra 12 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039377 -name: urethral vein -def: "A vein that drains the urethra." [UBERON:cjm] +id: UBERON:1200250 +name: superior articular process of first cervical vertebra +def: "A process of vertebra forming the broad lateral mass of the atlas (C1) on its superior aspect, bearing the kidney-shaped concave facet that receives the occipital condyle to form the atlanto-occipital joint, enabling nodding movements of the head." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:21270 -is_a: UBERON:0001638 ! vein -intersection_of: UBERON:0001638 ! vein -intersection_of: vessel_drains_blood_from UBERON:0000057 ! urethra -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0018252 {source="FMA"} ! internal pudendal vein -relationship: vessel_drains_blood_from UBERON:0000057 ! urethra +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039379 -name: vestibular bulb vein +id: UBERON:1200251 +name: superior articular process of second cervical vertebra +def: "A process of vertebra projecting laterally and superiorly from the body-pedicle junction of the axis (C2), bearing a flat oval articular facet that articulates with the inferior articular facet of the atlas; it is positioned anterior to the plane of the lower zygapophyseal joints." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "vena bulbi vestibuli" EXACT [FMA:21273] -xref: FMA:21273 -is_a: UBERON:0001638 ! vein -intersection_of: UBERON:0001638 ! vein -intersection_of: vessel_drains_blood_from UBERON:0013129 ! bulb of vestibule -relationship: part_of RO:0002577 ! system -relationship: tributary_of UBERON:0018252 {source="FMA"} ! internal pudendal vein -relationship: vessel_drains_blood_from UBERON:0013129 ! bulb of vestibule +is_a: UBERON:0006061 ! process of vertebra +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039418 -name: Alcock's canal -def: "An anatomical conduit in the pelvis through which the internal pudendal artery, internal pudendal veins, and the pudendal nerve pass." [https://en.wikipedia.org/wiki/Pudendal_canal] +id: UBERON:1200252 +name: superior costal facet of eleventh thoracic vertebra +def: "A zone of bone organ forming the superior demi-facet on the posterolateral body of the eleventh thoracic vertebra. It articulates with the head of rib 11; T11 typically bears a single large complete costal facet on the body for rib 11, which lacks a transverse costal facet on the transverse process, reflecting the atypical nature of this vertebra." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "canalis pudendalis" EXACT OMO:0003011 [A09.5.04.003, doi:10.1002/ca.23705] -synonym: "pudendal canal" EXACT DEPRECATED [doi:10.1002/ca.23705, FMA:22071] -xref: FMA:22071 -is_a: UBERON:0004111 ! anatomical conduit +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004635 ! thoracic vertebra 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039421 -name: superficial dorsal vein of penis -def: "A vein that drains the prepuce and skin of the penis, and, running backward in the subcutaneous tissue, inclines to the right or left, and opens into the corresponding superficial external pudendal vein, a tributary of the great saphenous vein.." [https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis] +id: UBERON:1200253 +name: superior mental spine of mandible +def: "A small skeletal element projection on the posterior surface of the mandibular symphysis forming the upper pair of genial tubercles, serving as the bilateral origin for the genioglossus muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Mandible] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:21384 -is_a: UBERON:0039422 ! dorsal vein of penis -relationship: part_of RO:0002577 ! system -relationship: part_of UBERON:0000989 {source="FMA"} ! penis -relationship: tributary_of UBERON:0009049 {source="FMA"} ! superficial external pudendal vein -relationship: vessel_drains_blood_from UBERON:0001331 ! skin of penis -relationship: vessel_drains_blood_from UBERON:0001332 ! prepuce of penis +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001684 ! mandible +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039422 -name: dorsal vein of penis -def: "One of the superficial dorsal vein of the penis or the deep dorsal vein of the penis." [https://en.wikipedia.org/wiki/Dorsal_veins_of_the_penis] +id: UBERON:1200254 +name: superior nuchal line of squamous part of occipital bone +def: "A zone of bone organ forming the upper of two curved ridges on the external surface of the squamous occipital bone, extending laterally from the external occipital protuberance. It provides attachment for the trapezius, sternocleidomastoid, and splenius capitis muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Occipital_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -is_a: UBERON:0001638 ! vein -is_a: UBERON:0005156 ! reproductive structure -union_of: UBERON:0006656 ! deep dorsal vein of penis -union_of: UBERON:0039421 ! superficial dorsal vein of penis -relationship: part_of UBERON:0000989 ! penis +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001676 ! occipital bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039835 -name: posterior intercostal artery +id: UBERON:1200255 +name: superior vertebral notch of first cervical vertebra +def: "A bone foramen forming the superior indentation on the posterior aspect of the lateral mass of the atlas (C1), which when combined with the groove for the vertebral artery transmits the vertebral artery and the first cervical (suboccipital) nerve." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Atlas_(anatomy)] +subset: added_by_HRA subset: human_subset subset: mouse_subset -is_a: UBERON:0005612 ! intercostal artery +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001092 ! vertebral bone 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039838 -name: seventh anterior intercostal artery +id: UBERON:1200256 +name: superior vertebral notch of second cervical vertebra +def: "A bone foramen forming the superior indentation on the upper border of the pedicle of the axis (C2), which together with the inferior vertebral notch of the atlas contributes to the first cervical intervertebral foramen, transmitting the second cervical nerve." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:10649 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0006632 {source="FMA"} ! musculo-phrenic artery +is_a: UBERON:0005744 ! bone foramen +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039839 -name: eighth anterior intercostal artery +id: UBERON:1200257 +name: supinator fossa of ulna +def: "A bone fossa forming the concave depression on the lateral aspect of the proximal ulna, just distal to the radial notch, providing the origin for the deep fibres of the supinator muscle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Ulna] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:10650 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0006632 {source="FMA"} ! musculo-phrenic artery +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001424 ! ulna +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039840 -name: ninth anterior intercostal artery +id: UBERON:1200259 +name: supramastoid crest of squamous part of temporal bone +def: "A crest forming a horizontal ridge on the outer surface of the squamous part of the temporal bone, running posteriorly from the root of the zygomatic process superior to the external auditory meatus. It represents the inferior margin of the temporal surface and serves as a landmark for the suprameatal triangle." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:10651 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0006632 {source="FMA"} ! musculo-phrenic artery +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039841 -name: first anterior intercostal artery +id: UBERON:1200260 +name: supraorbital notch or foramen of frontal bone +def: "A bone foramen or notch in the supraorbital margin of the frontal bone, positioned approximately one-third of the way along the margin from its medial end. It transmits the supraorbital nerve and vessels to the forehead and scalp." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Frontal_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "first intercostal branch of internal thoracic artery" EXACT [FMA:10652] -xref: FMA:10652 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +is_a: UBERON:0013685 ! foramen of skull +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000209 ! tetrapod frontal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039842 -name: second anterior intercostal artery +id: UBERON:1200261 +name: supraspinous fossa of scapula +def: "A triangular bone fossa on the posterior surface of the scapula superior to the scapular spine, providing origin for the supraspinatus muscle, whose tendon passes beneath the coracoacromial arch to insert on the greater tubercle of the humerus." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Scapula] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "second intercostal branch of internal thoracic artery" EXACT [FMA:10653] -xref: FMA:10653 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +is_a: UBERON:0004704 ! bone fossa +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0006849 ! scapula +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039843 -name: third anterior intercostal artery +id: UBERON:1200262 +name: sustentaculum tali of calcaneus +def: "A zone of bone organ forming a horizontal, shelf-like medial projection of the calcaneus that supports the head and neck of the talus. Its superior surface bears the middle talar articular facet, its inferior surface is grooved for the tendon of the flexor hallucis longus, and it provides attachment for the plantar calcaneonavicular and medial talocalcaneal ligaments." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Calcaneus] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "third intercostal branch of internal thoracic artery" EXACT [FMA:10654] -xref: FMA:10654 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001450 ! calcaneus +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039844 -name: fourth anterior intercostal artery +id: UBERON:1200264 +name: tibial plateau of tibia +def: "A zone of bone organ comprising the expanded proximal articular surface of the tibia, consisting of the medial and lateral condyles, which together form the superior articular surface of the knee joint. Each condyle bears a meniscus-covered articular facet that articulates with the corresponding femoral condyle, and the two condyles are separated by the intercondylar eminence." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Tibia] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "fourth intercostal branch of internal thoracic artery" EXACT [FMA:10655] -xref: FMA:10655 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +is_a: UBERON:0005055 ! zone of long bone +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000979 ! tibia +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039845 -name: fifth anterior intercostal artery +id: UBERON:1200265 +name: transverse costal facet of eighth thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the eighth thoracic vertebra, articulating with the tubercle of the eighth rib at the costotransverse joint. The transverse processes are progressively shorter and more posteriorly directed at this level, and the facet is correspondingly reduced compared to those of upper thoracic vertebrae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "fifth intercostal branch of internal thoracic artery" EXACT [FMA:10656] -xref: FMA:10656 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0011050 ! thoracic vertebra 8 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039846 -name: sixth anterior intercostal artery +id: UBERON:1200266 +name: transverse costal facet of eleventh thoracic vertebra +def: "A zone of bone organ located on the transverse process of the eleventh thoracic vertebra. T11 is atypical in that it generally lacks a true transverse costal facet, as rib 11 is a floating rib without a tubercular articulation at the transverse process; when present this facet is vestigial and clinically variable." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "sixth intercostal branch of internal thoracic artery" EXACT [FMA:10657] -xref: FMA:10657 -is_a: UBERON:0039169 {source="FMA"} ! anterior intercostal artery -relationship: part_of UBERON:0002456 {source="FMA"} ! internal thoracic artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004635 ! thoracic vertebra 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039847 -name: suprascapular artery +id: UBERON:1200267 +name: transverse costal facet of fifth thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the fifth thoracic vertebra, articulating with the tubercle of the fifth rib at the costotransverse joint. As thoracic vertebrae descend, the transverse process shortens and its costal facet becomes relatively smaller, though it remains distinct at T5." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "transverse scapular artery" EXACT [FMA:10663] -xref: FMA:10663 -is_a: UBERON:0004573 ! systemic artery -relationship: part_of UBERON:0039260 {source="FMA"} ! thyrocervical artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004630 ! thoracic vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039848 -name: anterior external vertebral venous plexus +id: UBERON:1200268 +name: transverse costal facet of first thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the first thoracic vertebra, articulating with the tubercle of the first rib at the costotransverse joint. T1 has well-developed transverse processes with distinct transverse costal facets that, together with the costal facets of the body, contribute to the firm articulation supporting the first rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:10787 -is_a: UBERON:0039258 {source="FMA"} ! external vertebral venous plexus +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004626 ! thoracic vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039849 -name: posterior external vertebral venous plexus +id: UBERON:1200269 +name: transverse costal facet of fourth thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the fourth thoracic vertebra, presenting as a smooth concave articular area that articulates with the tubercle of the fourth rib at the costotransverse joint. Together with the body demifacets it completes the bony articulation of rib 4 with the thoracic column." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:12852 -is_a: UBERON:0039258 {source="FMA"} ! external vertebral venous plexus +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004629 ! thoracic vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039850 -name: left anterior segmental artery +id: UBERON:1200270 +name: transverse costal facet of ninth thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the ninth thoracic vertebra, articulating with the tubercle of the ninth rib at the costotransverse joint. T9 represents the lower limit of the typical transverse costal facet pattern; below this level the transverse processes diminish and the facets become vestigial or absent." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "anterior bronchopulmonary segment of left pulmonary artery" EXACT [FMA:13279] -synonym: "anterior segmental artery of left lung" EXACT [FMA:13279] -synonym: "anterior segmental artery of left upper lobe" EXACT [FMA:13279] -xref: FMA:13279 -is_a: UBERON:0001637 ! artery -relationship: part_of UBERON:0001652 ! left pulmonary artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004633 ! thoracic vertebra 9 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039851 -name: apicoposterior segmental artery +id: UBERON:1200271 +name: transverse costal facet of second thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the second thoracic vertebra, presenting as a smooth oval articular area that articulates with the tubercle of the second rib at the costotransverse joint. This facet, together with the demifacets on the vertebral body, anchors the second rib to the thoracic column." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "apicoposterior artery of left lung" EXACT [FMA:13281] -synonym: "apicoposterior bronchopulmonary segment of left pulmonary artery" EXACT [FMA:13281] -synonym: "left apicoposterior pulmonary artery" EXACT [FMA:13281] -xref: FMA:13281 -is_a: UBERON:0039262 {source="FMA"} ! segmental pulmonary artery +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004627 ! thoracic vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039856 -name: right ovarian vein -def: "Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament." [FMA:14342] +id: UBERON:1200272 +name: transverse costal facet of seventh thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the seventh thoracic vertebra, articulating with the tubercle of the seventh rib at the costotransverse joint. The transverse processes decrease in length inferiorly through the thoracic series, and the facet at T7 is smaller than those of the upper thoracic vertebrae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:14342 -is_a: UBERON:0001145 {source="FMA"} ! ovarian vein -intersection_of: UBERON:0001145 ! ovarian vein -intersection_of: vessel_drains_blood_from UBERON:0002118 ! right ovary -relationship: tributary_of UBERON:0001072 {source="FMA"} ! inferior vena cava -relationship: vessel_drains_blood_from UBERON:0002118 ! right ovary +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004632 ! thoracic vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0039857 -name: left ovarian vein -def: "Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament." [FMA:14347] +id: UBERON:1200273 +name: transverse costal facet of sixth thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the sixth thoracic vertebra, articulating with the tubercle of the sixth rib at the costotransverse joint. It is a smooth, oval synovial articular area that guides rib rotation during breathing and contributes to thoracic cage stability." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -xref: FMA:14347 -is_a: UBERON:0001145 {source="FMA"} ! ovarian vein -intersection_of: UBERON:0001145 ! ovarian vein -intersection_of: vessel_drains_blood_from UBERON:0002119 ! left ovary -relationship: vessel_drains_blood_from UBERON:0002119 ! left ovary +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004631 ! thoracic vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0700019 -name: parallel fiber -def: "A parallel fiber results from the axon of a cerebellar granule cell ascending through the molecular layer where it synapses on the dendritic branches of Purkinje cells and stellate cells." [doi:10.1007/978-94-007-1333-8_63, GO:1990032] -comment: This a grouping class for parallel fibers in any species. If annotating a parallel fiber in any species other than teleost fish, consider using 'parallel fiber, bifurcated'. +id: UBERON:1200274 +name: transverse costal facet of tenth thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the tenth thoracic vertebra, articulating with the tubercle of the tenth rib at the costotransverse joint. T10 bears a transverse costal facet, though it is variably developed; the single complete costal facet on its body accommodates the head of the tenth rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -is_a: UBERON:0006134 ! nerve fiber -is_a: UBERON:0011215 ! central nervous system cell part cluster -relationship: overlaps CL:0001031 ! cerebellar granule cell -relationship: part_of UBERON:0002037 ! cerebellum -property_value: dcterms-date "2023-07-10T11:45:59Z" xsd:dateTime +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004634 ! thoracic vertebra 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:0700020 -name: parallel fiber, bifurcated -def: "A parallel fiber that results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium." [GO:1990032] +id: UBERON:1200275 +name: transverse costal facet of third thoracic vertebra +def: "A zone of bone organ located on the anterior surface of the transverse process of the third thoracic vertebra, articulating with the tubercle of the third rib at the costotransverse joint. It forms one component of the paired costovertebral articulations that stabilize and guide rib movement during respiration." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -is_a: UBERON:0700019 ! parallel fiber -disjoint_from: UBERON:2002218 ! parallel fiber, teleost -relationship: never_in_taxon NCBITaxon:70862 ! teleost fish -property_value: dcterms-date "2023-07-10T11:53:19Z" xsd:dateTime +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004628 ! thoracic vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000000 -name: chin ventral margin -def: "Subdivision of the head consisting of the area along the lower edge of the chin." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200278 +name: transverse ridges of sternum +def: "A zone of bone organ comprising the low, horizontal bony ridges on the anterior surface of the sternal body that mark the lines of fusion between adjacent sternebrae during development, typically three ridges dividing the body into four segments and remaining palpable on the adult sternum." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Sternum] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0001444 ! subdivision of head -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0008199 ! chin +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0000975 ! sternum +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000001 -name: collection of hairs on vertex -def: "A collection of hairs that grows on the vertex (top of head)." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200279 +name: trigeminal impression of petrous part of temporal bone +def: "A zone of bone organ forming a shallow depression near the apex of the petrous part of the temporal bone on its anterosuperior surface. It lodges the trigeminal ganglion (Gasserian ganglion) within Meckel's cave and is covered by a fold of dura mater." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "collection of hair on cranium" RELATED [] -synonym: "cranial hair" RELATED [] -synonym: "head hair" RELATED [] -is_a: UBERON:0014382 ! collection of hairs on head or neck -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0000033 ! head +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000002 -name: cranial midline area -def: "The middle part of the head, located approximately equidistant from the left and the right sides of the head." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200281 +name: tuberosity of fifth distal phalanx of hand +def: "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fifth distal phalanx, anchoring the fibrous septa of the fingertip pulp and providing support for the nail bed of the little finger." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "cranial midline" RELATED [] -is_a: UBERON:0001444 ! subdivision of head -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: intersects_midsagittal_plane_of UBERON:0000033 ! head +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004314 ! distal phalanx of manual digit 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000003 -name: dewlap -def: "A longitudinal flap of skin that hangs beneath the lower jaw or neck." [Wikipedia:Dewlap] -comment: Compare with: comb and wattle +id: UBERON:1200282 +name: tuberosity of first distal phalanx of hand +def: "A skeletal element projection forming the broad, roughened ungual tuberosity at the distal end of the thumb's distal phalanx, providing attachment for the fibrous septa of the fingertip pulp and support for the nail plate." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -xref: SCTID:13622004 -xref: Wikipedia:Dewlap -is_a: UBERON:1000021 ! skin of face -relationship: part_of UBERON:0001456 ! face +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004337 ! distal phalanx of manual digit 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000004 -name: collection of hair on external ear -def: "A collection of hairs that grows on the external ear." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200283 +name: tuberosity of fourth distal phalanx of hand +def: "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the fourth distal phalanx, anchoring the fibrous septa of the ring finger's pulp and supporting the overlying nail." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "external ear hair" RELATED [] -is_a: UBERON:0014382 ! collection of hairs on head or neck -intersection_of: UBERON:0010164 ! collection of hairs -intersection_of: part_of UBERON:0001691 ! external ear -relationship: composed_primarily_of UBERON:0022279 ! strand of hair on external ear -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0001691 ! external ear +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004313 ! distal phalanx of manual digit 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000005 -name: external ear margin -def: "Area along the edge of the external ear." [https://github.com/obophenotype/uberon/issues/34, https://orcid.org/0000-0002-2825-0621, UBERON:EJS] +id: UBERON:1200284 +name: tuberosity of second distal phalanx of hand +def: "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the second distal phalanx, providing attachment for the fibrous septa of the index fingertip pulp and underlying support for the nail plate." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0010000 ! multicellular anatomical structure -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0001691 ! external ear -property_value: seeAlso "https://github.com/obophenotype/uberon/issues/1795" xsd:string +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004311 ! distal phalanx of manual digit 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000006 -name: collection of hair on forehead -def: "A collection of hairs that grows on the forehead." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200285 +name: tuberosity of third distal phalanx of hand +def: "A skeletal element projection forming the roughened, horseshoe-shaped ungual tuberosity at the distal end of the third distal phalanx, anchoring the fibrous septa of the middle fingertip pulp and providing structural support for the nail bed." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Phalanx_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0010165 ! collection of hair on face -intersection_of: UBERON:0010164 ! collection of hairs -intersection_of: part_of UBERON:0008200 ! forehead -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0008200 ! forehead +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004312 ! distal phalanx of manual digit 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000007 -name: forehead protuberance -def: "A bulge, knob, or swelling that protrudes from the forehead." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200286 +name: tympanic caniliculus of petrous part of temporal bone +def: "A zone of bone organ forming a small canal in the floor of the jugular fossa of the petrous part of the temporal bone, transmitting the tympanic nerve (Jacobson's nerve), a branch of the glossopharyngeal nerve (CN IX), to the tympanic cavity where it contributes to the tympanic plexus." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0010188 ! protuberance -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0008200 ! forehead +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000008 -name: left part of face -def: "Subdivision of the head consisting of the left half of the face, vertically divided." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200287 +name: vertebra prominens of seventh cervical vertebra +def: "A zone of bone organ constituting the long, non-bifid spinous process of the seventh cervical vertebra (C7), which projects further posteriorly than those of adjacent vertebrae and is readily palpable through the skin at the base of the neck, serving as a key clinical landmark." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0001444 ! subdivision of head -is_a: UBERON:0015212 ! lateral structure -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: in_left_side_of UBERON:0001456 ! face -relationship: part_of UBERON:0001456 ! face +is_a: UBERON:0005913 ! zone of bone organ +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004616 ! mammalian cervical vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000009 -name: midline crest -def: "A ridge or peak located along the middle part of the head, located approximately equidistant from the left and the right sides of the head." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200288 +name: vertebral arch of eighth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the eighth thoracic vertebra, consisting of pedicles and laminae that together with the body form the vertebral canal. The arch bears steeply inclined articular processes in the coronal plane, transverse processes with costal facets for rib 8, and a long spinous process directed sharply inferiorly." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0001444 ! subdivision of head -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: in_taxon NCBITaxon:7742 ! Vertebrata +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0011050 ! thoracic vertebra 8 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000010 -name: mole -def: "A benign tumor on the skin, usually with darker pigment." [Wikipedia:Melanocytic_nevus] -subset: efo_slim +id: UBERON:1200289 +name: vertebral arch of eleventh thoracic vertebra +def: "A neural arch forming the posterior bony ring of the eleventh thoracic vertebra, composed of pedicles and laminae that enclose the spinal canal at the lower thoracic transitional level. T11 has short, blunt transverse processes that typically lack costal facets; the articular processes show mixed thoracic and lumbar orientation, and the spinous process is shorter and more horizontally directed than at mid-thoracic levels." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "melanocytic nevus" RELATED [] -synonym: "naevus" EXACT [ZFA:0005043] -synonym: "nevus" EXACT [ZFA:0005043] -xref: EFO:0000625 -xref: MESH:D009506 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration", pav:authoredBy="https://orcid.org/0000-0001-9439-5346"} -xref: MPATH:361 -xref: TAO:0005043 -xref: Wikipedia:Melanocytic_nevus -xref: ZFA:0005043 -is_a: UBERON:0000479 ! tissue -relationship: has_part CL:0000148 ! melanocyte -relationship: part_of UBERON:0002067 {source="ZFA"} ! dermis -property_value: external_definition "An ectopic melanophore accumulation analogous to a nevi (mole) in humans.[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0005043", ontology="TAO", source="ZFIN:curator"} +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004635 ! thoracic vertebra 11 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000011 -name: labial commissure -def: "Anatomical structure consisting of either corner of the mouth." [Wikipedia:Labial_commissure_of_mouth] +id: UBERON:1200290 +name: vertebral arch of fifth cervical vertebra +def: "A neural arch forming the posterior bony ring of the fifth cervical vertebra (C5), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears the bifid spinous process posteriorly and the superior and inferior articular processes laterally." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "commissura labiorum oris" RELATED OMO:0003011 [Wikipedia:Labial_commissure_of_mouth] -synonym: "commissural lip" RELATED [] -synonym: "corner of mouth" RELATED [] -xref: FMA:277716 -xref: Wikipedia:Labial_commissure_of_mouth -is_a: UBERON:0034929 ! external soft tissue zone -relationship: part_of UBERON:0000165 ! mouth -property_value: depiction "http://upload.wikimedia.org/wikipedia/commons/9/90/Commissurebeforeandafter.jpg" xsd:anyURI +is_a: UBERON:0008434 ! cervical vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004614 ! mammalian cervical vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000012 -name: nose anterior margin -def: "Subdivision of the head consisting of the area along the front edge of the external nose." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200291 +name: vertebral arch of fifth lumbar vertebra +def: "A neural arch of the fifth lumbar vertebra, formed by the thickest, most robust pedicles of the lumbar column and broad laminae enclosing the vertebral foramen at the lumbosacral junction. Its transverse processes are large and pyramid-shaped, providing the origin of the strong iliolumbar ligaments that anchor L5 to the iliac crests." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0034929 ! external soft tissue zone -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0007827 ! external nose +is_a: UBERON:0008433 ! lumbar vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004621 ! lumbar vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000013 -name: nose vertex -def: "The extreme point of curvature of the external nose." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200292 +name: vertebral arch of fifth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the fifth thoracic vertebra, consisting of pedicles and laminae that together with the body enclose the spinal canal at mid-thoracic level. Its spinous process is long and steeply inclined inferiorly, and the transverse processes project posterolaterally bearing facets for the tubercle of rib 5." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0034929 ! external soft tissue zone -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0007827 ! external nose +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004630 ! thoracic vertebra 5 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000014 -name: right part of face -def: "Subdivision of the head consisting of the right half of the face, vertically divided." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200293 +name: vertebral arch of first lumbar vertebra +def: "A neural arch of the first lumbar vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen and protect the upper lumbar spinal cord and cauda equina. The arch bears short, stout transverse processes directed laterally and a broad, horizontally projecting spinous process; it lies immediately below the thoracolumbar junction." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0001444 ! subdivision of head -is_a: UBERON:0015212 ! lateral structure -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: in_right_side_of UBERON:0001456 ! face -relationship: part_of UBERON:0001456 ! face +is_a: UBERON:0008433 ! lumbar vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004617 ! lumbar vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000015 -name: skin of snout -def: "A zone of skin that is part of the snout." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200294 +name: vertebral arch of first thoracic vertebra +def: "A neural arch forming the posterior bony ring of the first thoracic vertebra, consisting of paired pedicles and laminae that together with the vertebral body enclose the vertebral foramen. It bears the transverse processes with costal facets, the superior and inferior articular processes, and a long inferiorly directed spinous process, providing attachment for deep back muscles and spinal ligaments." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "snout skin" EXACT [MA:0003079] -xref: EMAPA:37746 {source="MA:th"} -xref: MA:0003079 -is_a: UBERON:1000021 ! skin of face -intersection_of: UBERON:0000014 ! zone of skin -intersection_of: part_of UBERON:0006333 ! snout -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0006333 ! snout +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004626 ! thoracic vertebra 1 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000016 -name: tip of snout -def: "Subdivision of the head consisting of the pointed or rounded end or extremity of the snout." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200295 +name: vertebral arch of fourth cervical vertebra +def: "A neural arch forming the posterior bony ring of the fourth cervical vertebra (C4), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a bifid spinous process posteriorly and the zygapophyseal articular processes laterally." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA +subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0034929 ! external soft tissue zone -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0006333 ! snout +is_a: UBERON:0008434 ! cervical vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004613 ! mammalian cervical vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000017 -name: tip of external ear -def: "Subdivision of the head consisting of the pointed or rounded end or extremity of the external ear." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200296 +name: vertebral arch of fourth lumbar vertebra +def: "A neural arch of the fourth lumbar vertebra, consisting of robust pedicles and wide laminae that form the vertebral foramen enclosing the cauda equina at the level where the iliac crests are typically palpated as a clinical landmark. Its broad, horizontal spinous process and lateral transverse processes serve as attachment sites for the iliolumbar ligament." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0034929 ! external soft tissue zone -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0001691 ! external ear +is_a: UBERON:0008433 ! lumbar vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004620 ! lumbar vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000018 -name: cluster of hairs -def: "A small collection or tuft of hairs." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200297 +name: vertebral arch of fourth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the fourth thoracic vertebra, composed of paired pedicles and laminae that unite at the spinous process. It bears the superior and inferior articular processes oriented in the coronal plane and the transverse processes with costal facets for rib 4, with a long spinous process that overlaps the level below." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "tuft of hair" RELATED [] -is_a: UBERON:0010164 ! collection of hairs -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004629 ! thoracic vertebra 4 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000019 -name: top of head -def: "The top of the head." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200298 +name: vertebral arch of ninth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the ninth thoracic vertebra, composed of pedicles and broad laminae enclosing the spinal canal in the lower thoracic region. The spinous process is long and inferiorly directed, and the transverse processes carry facets for the tubercle of rib 9, near the lower limit of the typical transverse costal facet series." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: phenotype_rcn -synonym: "vertex" RELATED [FMA:46484] -synonym: "vertex of head" EXACT [FMA:46484] -xref: FMA:46484 -xref: SCTID:362616002 -is_a: UBERON:0001444 ! subdivision of head -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -property_value: external_ontology_notes "in the FMA, vertex is a point and not a subdivision" xsd:string {external_ontology="FMA"} +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004633 ! thoracic vertebra 9 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000020 -name: collection of hair on snout -def: "A collection of hairs that grows on the snout." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200299 +name: vertebral arch of second cervical vertebra +def: "A neural arch forming the posterior bony ring of the axis (C2), composed of two robust pedicles and two broad laminae; it bears the characteristically large bifid spinous process posteriorly and supports the superior articular processes that articulate with the atlas." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Axis_(anatomy)] +subset: added_by_HRA +subset: human_subset subset: mouse_subset -subset: phenotype_rcn -is_a: UBERON:0010165 ! collection of hair on face -intersection_of: UBERON:0010165 ! collection of hair on face -intersection_of: part_of UBERON:0006333 ! snout -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0006333 ! snout -creation_date: 2012-02-05T05:21:29Z +is_a: UBERON:0000218 ! vertebral arch of axis +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001093 ! vertebral bone 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000021 -name: skin of face -def: "A zone of skin that is part of the face." [https://github.com/obophenotype/uberon/issues/34, UBERON:EJS] +id: UBERON:1200300 +name: vertebral arch of second lumbar vertebra +def: "A neural arch of the second lumbar vertebra, formed by two short, broad pedicles and two wide, flat laminae that enclose the vertebral foramen at a level where the spinal cord typically terminates. Its stout transverse processes project laterally and slightly posteriorly, and its broad, horizontal spinous process gives attachment to the thoracolumbar fascia and erector spinae." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -subset: pheno_slim -subset: phenotype_rcn -synonym: "face skin" EXACT [EMAPA:36657, FMA:24758] -synonym: "facial skin" RELATED [] -xref: EMAPA:36657 -xref: FMA:24758 -xref: NCIT:C33561 -xref: SCTID:361703006 -xref: UMLS:C0222084 {source="ncithesaurus:Skin_of_the_Face"} -is_a: UBERON:0001084 ! skin of head -intersection_of: UBERON:0000014 ! zone of skin -intersection_of: part_of UBERON:0001456 ! face -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -relationship: dc-contributor https://orcid.org/0000-0002-9611-1279 -relationship: part_of UBERON:0001456 ! face -creation_date: 2012-02-05T05:23:01Z +is_a: UBERON:0008433 ! lumbar vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004618 ! lumbar vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000022 -name: Zymbal's gland -def: "A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal." [http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/zymbalgland.html, ISBN:0123813611, MP:0013384] +id: UBERON:1200301 +name: vertebral arch of second thoracic vertebra +def: "A neural arch forming the posterior bony ring of the second thoracic vertebra, composed of paired pedicles projecting posterolaterally from the vertebral body and paired laminae uniting at the spinous process. The arch bears the articular processes and transverse processes with costal facets, and gives attachment to the ligamenta flava, interspinous ligaments, and deep back musculature." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset subset: mouse_subset -synonym: "auditory sebaceous gland" RELATED [ISBN:0123813611] -synonym: "gland of Zymbal" RELATED [] -synonym: "Zymbal gland" RELATED [MA:0002900] -xref: EMAPA:37808 {source="MA:th"} -xref: MA:0002900 -xref: NCIT:C77954 -xref: SCTID:105587007 -xref: UMLS:C0687056 {source="ncithesaurus:Zymbal_Gland"} -is_a: UBERON:0015251 {source="ISBN:0123813611", source="MA"} ! modified sebaceous gland -relationship: in_taxon NCBITaxon:9989 ! Rodentia -relationship: part_of UBERON:0001691 {source="cjm"} ! external ear -property_value: location_notes "located anterior and ventral to the exterior ear canal in rodents[MP:0013384]" xsd:string -property_value: structure_notes "Zymbal's glands are located beneath squamous epithelium at the anterior and posterior aspect of the ear canal, and as a single external gland that is located anterior and ventral to the base of the external ear canal. The bilateral Zymbal's glands are adjacent to the auditory canal and are made up of several lobules of modified sebaceous glands - http://ratguide.com/health/neoplasia/zymbals_gland_tumor.php." xsd:string +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004627 ! thoracic vertebra 2 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000023 -name: spleen pulp -def: "The parenchyma of the spleen, consisting of lymphocytes and macrophages. It lies between the splenic trabecula. Red pulp is the part suffused with blood and white pulp consists of areas of lymphatic tissue where there are sleeves of lymphocytes and macrophages." [ncithesaurus:Splenic_Pulp] -subset: human_reference_atlas +id: UBERON:1200302 +name: vertebral arch of seventh cervical vertebra +def: "A neural arch forming the posterior bony ring of the seventh cervical vertebra (C7), composed of two pedicles and two laminae; it bears the long non-bifid vertebra prominens spinous process posteriorly, marking the transition to the thoracic spine." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "Malpighian corpuscles" EXACT [FMA:15845] -synonym: "pulp of spleen" EXACT [] -synonym: "splenic pulp" EXACT [] -xref: EMAPA:35805 -xref: FMA:15845 -xref: MA:0002487 -xref: NCIT:C33603 -xref: SCTID:13515001 -xref: UMLS:C0229691 {source="ncithesaurus:Splenic_Pulp"} -is_a: UBERON:0000064 ! organ part -relationship: part_of UBERON:1000024 {source="FMA"} ! parenchyma of spleen +is_a: UBERON:0008434 ! cervical vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004616 ! mammalian cervical vertebra 7 relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1000024 -name: parenchyma of spleen -def: "A parenchyma that is part of a spleen." [OBOL:automatic] +id: UBERON:1200303 +name: vertebral arch of seventh thoracic vertebra +def: "A neural arch forming the posterior bony ring of the seventh thoracic vertebra, composed of pedicles and laminae that protect the spinal cord at the kyphotic apex. Its spinous process is among the most nearly horizontal of the thoracic series and is the longest, making T7 a key landmark; transverse processes carry distinct costal facets for rib 7." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "splenic parenchyma" EXACT [FMA:16029] -xref: FMA:16029 -is_a: UBERON:0000353 ! parenchyma -intersection_of: UBERON:0000353 ! parenchyma -intersection_of: part_of UBERON:0002106 ! spleen -relationship: part_of UBERON:0002106 ! spleen +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004632 ! thoracic vertebra 7 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1100000 -name: digestive tract junction -def: "An anatomical junction between two parts of the digestive tract." [https://orcid.org/0000-0002-7073-9172] +id: UBERON:1200304 +name: vertebral arch of sixth cervical vertebra +def: "A neural arch forming the posterior bony ring of the sixth cervical vertebra (C6), composed of two pedicles and two laminae; it bears a bifid spinous process posteriorly and provides attachment for the semispinalis and multifidus muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -is_a: UBERON:0007651 ! anatomical junction -intersection_of: UBERON:0007651 ! anatomical junction -intersection_of: connects UBERON:0004921 ! subdivision of digestive tract -relationship: connects UBERON:0004921 ! subdivision of digestive tract +is_a: UBERON:0008434 ! cervical vertebral arch relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 -creation_date: 2021-02-05T11:19:31Z +relationship: part_of UBERON:0004615 ! mammalian cervical vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1200000 -name: ileocecal fold -def: "A fold of peritoneum between the ileum and cecum. The upper border of the ileocecal fold is fixed to the ileum opposite its mesenteric attachment, and the lower border passes over the ileocecal junction to join the mesentery of the appendix (and sometimes the appendix itself as well). Behind the ileocecal fold is the inferior ileocecal fossa." [https://en.wikipedia.org/wiki/Ileocecal_fold] +id: UBERON:1200305 +name: vertebral arch of sixth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the sixth thoracic vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen. Located near the thoracic kyphotic apex, it bears a long, inferiorly inclined spinous process and transverse processes with costal facets that articulate with the tubercle of the sixth rib." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "ileocaecal fold" EXACT [] -xref: FMA:16532 -is_a: UBERON:0034696 ! fold of peritoneum -relationship: dc-contributor https://orcid.org/0000-0002-6601-2165 -property_value: dcterms-date "2025-01-15T10:00:00Z" xsd:dateTime -property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3326" xsd:anyURI -created_by: dragon-ai-agent +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004631 ! thoracic vertebra 6 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1200001 -name: sixth lumbar dorsal root ganglion -def: "The group of nerve cell bodies located on the dorsal spinal roots within the vertebral column at the level of the sixth lumbar vertebra." [PMID:18316160] -subset: defined_by_ordinal_series +id: UBERON:1200306 +name: vertebral arch of tenth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the tenth thoracic vertebra, consisting of pedicles and laminae enclosing the vertebral foramen at the lower thoracic level. T10 is transitional; its arch bears transverse processes that may have a small costal facet for rib 10 and articular processes that begin to reflect the approaching thoracolumbar morphology." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "L6 dorsal root ganglion" EXACT [] -synonym: "sixth lumbar spinal ganglion" EXACT [] -is_a: UBERON:0002836 ! lumbar dorsal root ganglion -relationship: dc-contributor https://orcid.org/0000-0003-0289-8988 -property_value: dcterms-date "2025-11-03T00:00:00Z" xsd:dateTime -property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3618" xsd:anyURI -created_by: dragon-ai-agent +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004634 ! thoracic vertebra 10 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1200002 -name: carotid artery intima-media region -def: "A region of the carotid artery wall composed of the tunica intima and tunica media." [PMID:39416432] +id: UBERON:1200307 +name: vertebral arch of third cervical vertebra +def: "A neural arch forming the posterior bony ring of the third cervical vertebra (C3), composed of two pedicles and two laminae enclosing the vertebral foramen; it bears a small bifid spinous process posteriorly and the zygapophyseal articular processes laterally." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Cervical_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "carotid intima-media" EXACT [PMID:39416432] -is_a: UBERON:0000481 ! multi-tissue structure -relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 -relationship: has_part UBERON:0002522 ! tunica media -relationship: has_part UBERON:0002523 ! tunica intima -relationship: part_of NCBITaxon:6072 ! Eumetazoa -relationship: part_of UBERON:0005396 ! carotid artery segment -property_value: dcterms-date "2025-11-14T00:00:00Z" xsd:dateTime -property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3629" xsd:anyURI -created_by: dragon-ai-agent +is_a: UBERON:0008434 ! cervical vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004612 ! mammalian cervical vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] -id: UBERON:1200003 -name: uterine fundus -def: "The superior, dome-shaped portion of the uterus." [PMID:40653088, PMID:41204538] +id: UBERON:1200308 +name: vertebral arch of third lumbar vertebra +def: "A neural arch of the third lumbar vertebra, comprising paired pedicles and broad laminae enclosing the vertebral foramen at the mid-lumbar level within the cauda equina region. It bears the longest transverse processes of any lumbar vertebra, projecting laterally and providing extensive attachment for the psoas major and quadratus lumborum muscles." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Lumbar_vertebrae] +subset: added_by_HRA subset: human_subset subset: mouse_subset -synonym: "fundus of uterus" EXACT [] -synonym: "fundus uteri" EXACT OMO:0003011 [PMID:39112955] -is_a: UBERON:0000064 ! organ part -is_a: UBERON:0005156 ! reproductive structure -relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 -relationship: part_of UBERON:0000995 ! uterus -property_value: dcterms-date "2025-12-03T00:00:00Z" xsd:dateTime -property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3637" xsd:anyURI -created_by: dragon-ai-agent +is_a: UBERON:0008433 ! lumbar vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004619 ! lumbar vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200309 +name: vertebral arch of third thoracic vertebra +def: "A neural arch forming the posterior bony ring of the third thoracic vertebra, composed of short pedicles and broad laminae that enclose the vertebral foramen and protect the spinal cord. The arch carries the transverse processes bearing transverse costal facets and a long, steeply inclined spinous process characteristic of the mid-upper thoracic region." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004628 ! thoracic vertebra 3 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200310 +name: vertebral arch of twelfth thoracic vertebra +def: "A neural arch forming the posterior bony ring of the twelfth thoracic vertebra, composed of pedicles and laminae enclosing the spinal canal at the thoracolumbar junction. T12 is the most atypical thoracic vertebra; its arch bears mamillary and accessory processes resembling lumbar features, lacks transverse costal facets, and its inferior articular facets adopt the lumbar sagittal orientation." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Thoracic_vertebrae] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0008436 ! thoracic vertebral arch +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0004636 ! thoracic vertebra 12 +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200338 +name: zygomatic process of squamous part of temporal bone +def: "A skeletal element projection extending anteriorly from the squamous part of the temporal bone to articulate with the temporal process of the zygomatic bone, completing the zygomatic arch. Its superior border gives attachment to the temporal fascia, and the masseter muscle attaches to its inferior surface." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Temporal_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:4100000 ! skeletal element projection +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001678 ! temporal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime + +[Term] +id: UBERON:1200339 +name: zygomaticofacial foramen of zygomatic bone +def: "A bone foramen situated on the anterolateral surface of the zygomatic bone, typically appearing as a single small opening lateral to the infraorbital margin; it transmits the zygomaticofacial nerve, a cutaneous branch of the zygomatic nerve (from CN V2), and accompanying blood vessels to supply the skin over the malar prominence of the cheek." [https://fipat.library.dal.ca/ta2/, ISBN:9780323393225, Wikipedia:Zygomatic_bone] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006271 ! orbital fissure +relationship: dc-contributor https://orcid.org/0000-0002-7073-9172 +relationship: part_of UBERON:0001683 ! jugal bone +relationship: present_in_taxon NCBITaxon:9606 ! Homo sapiens +property_value: dcterms-date "2026-03-19T00:00:00Z" xsd:dateTime [Term] id: UBERON:1500000 @@ -416304,7 +420882,7 @@ is_a: UBERON:6000007 ! procephalic segment [Term] id: UBERON:6000009 name: antennal segment -def: "Segment anterior to the intercalary segment. In the adult it bears the antennae." [FBC:DOS] +def: "Segment anterior to the intercalary segment. In the adult it bears the antennae." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00000009 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6000007 ! procephalic segment @@ -416345,7 +420923,7 @@ relationship: part_of UBERON:6000015 ! insect thorax [Term] id: UBERON:6000017 name: insect prothoracic segment -def: "The first (most anterior) segment of the thorax." [FBC:DOS] +def: "The first (most anterior) segment of the thorax." [https://orcid.org/0000-0002-7073-9172] synonym: "prothorax" RELATED [] synonym: "t1" RELATED [] synonym: "thoracic segment 1" RELATED [] @@ -416356,7 +420934,7 @@ relationship: part_of UBERON:6000015 ! insect thorax [Term] id: UBERON:6000018 name: insect mesothoracic segment -def: "The second (middle) segment of the thorax." [FBC:DOS] +def: "The second (middle) segment of the thorax." [https://orcid.org/0000-0002-7073-9172] synonym: "mesothorax" RELATED [] synonym: "t2" RELATED [] synonym: "thoracic segment 2" RELATED [] @@ -416367,7 +420945,7 @@ relationship: part_of UBERON:6000015 ! insect thorax [Term] id: UBERON:6000019 name: insect metathoracic segment -def: "The third (most posterior) segment of the thorax." [FBC:DOS] +def: "The third (most posterior) segment of the thorax." [https://orcid.org/0000-0002-7073-9172] synonym: "metathorax" RELATED [] synonym: "t3" RELATED [] synonym: "thoracic segment 3" RELATED [] @@ -416412,7 +420990,7 @@ relationship: part_of UBERON:6000020 ! insect abdomen [Term] id: UBERON:6000046 name: insect dorsal appendage -def: "Paired appendage of the eggshell, located on the anterior-dorsal side of the egg, just posterior to the operculum. Functions as a respiratory structures." [FBC:DOS] +def: "Paired appendage of the eggshell, located on the anterior-dorsal side of the egg, just posterior to the operculum. Functions as a respiratory structures." [https://orcid.org/0000-0002-7073-9172] synonym: "chorionic appendage" EXACT [FlyBase:FBrf0047871] xref: FBbt:00000046 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6007248 ! insect chorionic specialization @@ -416464,7 +421042,7 @@ relationship: part_of UBERON:6007045 ! insect trunk ectoderm [Term] id: UBERON:6000119 name: insect anterior ectoderm -def: "The region of the ectoderm anterior to the cephalic furrow." [FBC:DOS] +def: "The region of the ectoderm anterior to the cephalic furrow." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00000119 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0010000 ! multicellular anatomical structure relationship: in_taxon NCBITaxon:50557 ! Insecta @@ -416475,7 +421053,7 @@ id: UBERON:6000128 name: insect trunk mesoderm def: "The mesoderm of segments T1-A9. It first becomes morphologically distinct during ventral furrow formation. Following invagination during stages 6 and 7, it remains a coherent structure with no morphologically apparent subdivisions, apart from transient metamery during stage 9, until stage 11. It undergoes a number of morphological changes during this period: as its cells divide following invagination, it loses its epithelial integrity and by stage 9 has rearranged into a monolayer of cuboidal cells. A further division happens during stage 10 leading to two distinct layers by stage 11." [FlyBase:FBrf0089570] synonym: "AtrunkMes" RELATED [] -synonym: "P2 TrMes" RELATED [FBC:DOS] +synonym: "P2 TrMes" RELATED [https://orcid.org/0000-0002-7073-9172] synonym: "TrMes" RELATED [] xref: FBbt:00000128 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0000926 ! mesoderm @@ -416613,7 +421191,7 @@ relationship: part_of UBERON:6000166 ! insect embryonic thorax [Term] id: UBERON:6000168 name: insect embryonic prothoracic segment -def: "Prothoracic segment of the embryo." [FBC:DOS] +def: "Prothoracic segment of the embryo." [https://orcid.org/0000-0002-7073-9172] synonym: "prothorax" RELATED [] synonym: "t1" RELATED [] synonym: "thoracic segment 1" RELATED [] @@ -416627,7 +421205,7 @@ relationship: part_of UBERON:6000166 ! insect embryonic thorax [Term] id: UBERON:6000169 name: insect embryonic mesothoracic segment -def: "Mesothoracic segment of the embryo." [FBC:DOS] +def: "Mesothoracic segment of the embryo." [https://orcid.org/0000-0002-7073-9172] synonym: "mesothorax" RELATED [] synonym: "t2" RELATED [] synonym: "thoracic segment 2" RELATED [] @@ -416641,7 +421219,7 @@ relationship: part_of UBERON:6000166 ! insect embryonic thorax [Term] id: UBERON:6000170 name: insect embryonic metathoracic segment -def: "Metathoracic segment of the embryo." [FBC:DOS] +def: "Metathoracic segment of the embryo." [https://orcid.org/0000-0002-7073-9172] synonym: "metathorax" RELATED [] synonym: "t3" RELATED [] synonym: "thoracic segment 3" RELATED [] @@ -416655,7 +421233,7 @@ relationship: part_of UBERON:6000166 ! insect embryonic thorax [Term] id: UBERON:6000171 name: insect embryonic abdomen -def: "Abdomen of the embryo." [FBC:DOS] +def: "Abdomen of the embryo." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00000171 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6000020 ! insect abdomen is_a: UBERON:6000137 ! embryonic tagma @@ -416722,7 +421300,7 @@ replaced_by: UBERON:6005380 id: UBERON:6001055 name: insect presumptive embryonic/larval nervous system def: "The sum of all the structures in the embryo that will develop into the embryonic/larval nervous system." [FlyBase:FBrf0031012] -synonym: "embryonic nervous system" RELATED [FBC:DOS] +synonym: "embryonic nervous system" RELATED [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00001055 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6007116 ! insect presumptive embryonic/larval system @@ -416730,7 +421308,7 @@ is_a: UBERON:6007116 ! insect presumptive embryonic/larval system id: UBERON:6001056 name: insect presumptive embryonic/larval central nervous system def: "The sum of all the structures in the embryo that will develop into the embryonic/larval central nervous system." [FlyBase:FBrf0031012] -synonym: "embryonic central nervous system" RELATED [FBC:DOS] +synonym: "embryonic central nervous system" RELATED [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00001056 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6007116 ! insect presumptive embryonic/larval system relationship: part_of UBERON:6001055 ! insect presumptive embryonic/larval nervous system @@ -416747,7 +421325,7 @@ id: UBERON:6001059 name: insect visual primordium synonym: "optic lobe placode" RELATED [] synonym: "optic lobe primordium" RELATED [] -synonym: "P2 VisSys" RELATED [FBC:DOS] +synonym: "P2 VisSys" RELATED [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00001059 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0001048 ! primordium is_a: UBERON:0002050 ! embryonic structure @@ -417677,7 +422255,7 @@ relationship: part_of UBERON:6007020 ! insect metatarsus of male prothoracic leg [Term] id: UBERON:6004340 name: insect wing hair -def: "The posteriorly oriented trichome of a cell of the wing blade. Each cell makes one of these trichomes at its posterior vertex." [FBC:DOS] +def: "The posteriorly oriented trichome of a cell of the wing blade. Each cell makes one of these trichomes at its posterior vertex." [https://orcid.org/0000-0002-7073-9172] synonym: "wing trichome" RELATED [] xref: FBbt:00004340 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6004979 ! insect trichome @@ -417799,7 +422377,7 @@ relationship: part_of UBERON:6004578 ! insect adult external mesothorax [Term] id: UBERON:6004580 name: insect mesothoracic tergum -def: "The dorsal sclerites (tergites) of the mesothorax." [FBC:DOS] +def: "The dorsal sclerites (tergites) of the mesothorax." [https://orcid.org/0000-0002-7073-9172] synonym: "alinotum" EXACT [FlyBase:FBrf0111704] synonym: "mesonotum" EXACT [FlyBase:FBrf0166419] synonym: "notum" BROAD [] @@ -417902,7 +422480,7 @@ relationship: develops_from UBERON:6001785 ! insect male genital disc [Term] id: UBERON:6004979 name: insect trichome -def: "Non-innervated projection of the cuticle around an actin-rich cellular process of an underlying epidermal cell." [FBC:DOS] +def: "Non-innervated projection of the cuticle around an actin-rich cellular process of an underlying epidermal cell." [https://orcid.org/0000-0002-7073-9172] synonym: "cell hair" RELATED [] xref: FBbt:00004979 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6007245 ! insect cuticular specialization @@ -417943,7 +422521,7 @@ relationship: part_of UBERON:0000922 ! embryo id: UBERON:6005037 name: insect tracheal primordium def: "Primordium of a single tracheal metamere of the embryonic/larval tracheal system from its appearance as a placode during stage 11 to the completion of fusion with adjacent tracheal metameres in stage 15/16. There are 10 pairs of tracheal primordia - one pair in each segment from T2 to A8. Each tracheal primordium originates as a slight depression in the lateral ectoderm during stage 10 known as a tracheal placode. During stage 11, these placodes invaginate to form tracheal pits that elongate and branch. These pits close over during stage 13. Fusion of tracheal primordia begins at stage 14 with fusion of the dorsal trunk primordia and is complete by early stage 16." [FlyBase:FBrf0089570] -synonym: "P2 TrachP" EXACT [FBC:DOS] +synonym: "P2 TrachP" EXACT [https://orcid.org/0000-0002-7073-9172] synonym: "tracheal placode" RELATED [] synonym: "TrachP3" RELATED [] xref: FBbt:00005037 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} @@ -418122,7 +422700,7 @@ relationship: part_of UBERON:0000922 ! embryo [Term] id: UBERON:6005514 name: insect adult clypeo-labral primordium -synonym: "A AdCly" RELATED [FBC:DOS] +synonym: "A AdCly" RELATED [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00005514 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0001048 ! primordium is_a: UBERON:6001648 ! insect embryonic imaginal precursor @@ -418145,7 +422723,7 @@ relationship: part_of UBERON:0000922 ! embryo [Term] id: UBERON:6005533 name: insect ventral epidermis primordium -synonym: "P2 iVenEp" RELATED [FBC:DOS] +synonym: "P2 iVenEp" RELATED [https://orcid.org/0000-0002-7073-9172] synonym: "venEpiP2" RELATED [] xref: FBbt:00005533 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0001048 ! primordium @@ -418171,7 +422749,7 @@ synonym: "cardiac mesoderm" EXACT [] synonym: "cardiac mesoderm primordium" RELATED [] synonym: "CardMes" EXACT [] synonym: "CardMesP2" EXACT [] -synonym: "P2 CardMes" EXACT [FBC:DOS] +synonym: "P2 CardMes" EXACT [https://orcid.org/0000-0002-7073-9172] is_a: UBERON:6026002 ! insect visceral mesoderm derivative relationship: develops_from UBERON:6000130 ! insect visceral mesoderm relationship: in_taxon NCBITaxon:6656 {source="https://github.com/obophenotype/uberon/issues/2050"} ! Arthropoda @@ -418181,7 +422759,7 @@ relationship: part_of UBERON:0000922 ! embryo id: UBERON:6005558 name: insect ventral ectoderm def: "Ventral part of the insect trunk ectoderm." [ISBN:9783540570790] -synonym: "P2 VenEc" RELATED [FBC:DOS] +synonym: "P2 VenEc" RELATED [https://orcid.org/0000-0002-7073-9172] synonym: "venEc" RELATED [] xref: FBbt:00005558 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0002050 ! embryonic structure @@ -418190,8 +422768,8 @@ relationship: part_of UBERON:6007045 ! insect trunk ectoderm [Term] id: UBERON:6005569 name: insect presumptive embryonic/larval tracheal system -def: "The sum of all the structures in the embryo that will develop into the embryonic/larval tracheal system. This corresponds to the tracheal primordia and their component tracheal branch primordia along with primordia of the spiracles." [FBC:DOS] -synonym: "embryonic tracheal system" RELATED [FBC:DOS] +def: "The sum of all the structures in the embryo that will develop into the embryonic/larval tracheal system. This corresponds to the tracheal primordia and their component tracheal branch primordia along with primordia of the spiracles." [https://orcid.org/0000-0002-7073-9172] +synonym: "embryonic tracheal system" RELATED [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00005569 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6007116 ! insect presumptive embryonic/larval system @@ -418221,7 +422799,7 @@ id: UBERON:6005830 name: insect Bolwig organ primordium def: "Primordium of the insect embryo that gives rise to the larval Bolwig organ." [ISBN:9783540570790] synonym: "Bolwig's organ primordium" EXACT [] -synonym: "P1 BolOrg" RELATED [FBC:DOS] +synonym: "P1 BolOrg" RELATED [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00005830 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0001048 ! primordium is_a: UBERON:0002050 ! embryonic structure @@ -418257,7 +422835,7 @@ relationship: in_taxon NCBITaxon:50557 ! Insecta [Term] id: UBERON:6006032 name: insect mesothoracic tergum primordium -def: "Region of the dorsal mesothoracic disc that will develop into the mesothoracic tergum." [FBC:DOS, FlyBase:FBrf0027793] +def: "Region of the dorsal mesothoracic disc that will develop into the mesothoracic tergum." [FlyBase:FBrf0027793, https://orcid.org/0000-0002-7073-9172] xref: FBbt:00006032 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0000485 ! simple columnar epithelium relationship: part_of UBERON:6001778 ! insect wing disc @@ -418273,7 +422851,7 @@ relationship: part_of UBERON:0003101 ! male organism [Term] id: UBERON:6007045 name: insect trunk ectoderm -def: "The region of the ectoderm posterior to the cephalic furrow." [FBC:DOS] +def: "The region of the ectoderm posterior to the cephalic furrow." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007045 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0002050 ! embryonic structure relationship: in_taxon NCBITaxon:50557 ! Insecta @@ -418301,7 +422879,7 @@ relationship: part_of UBERON:6001925 ! insect embryonic/larval protocerebrum [Term] id: UBERON:6007116 name: insect presumptive embryonic/larval system -def: "The sum of all the developing presumptive components of a specific embryonic/larval system in an embryo." [FBC:DOS] +def: "The sum of all the developing presumptive components of a specific embryonic/larval system in an embryo." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007116 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0002050 ! embryonic structure is_a: UBERON:6040003 ! insect non-connected developing system @@ -418342,7 +422920,7 @@ relationship: part_of UBERON:0005895 ! insect leg [Term] id: UBERON:6007231 name: insect external sensillum -def: "Sensillum which is embedded in the body wall and has a specific cuticular structure involved in the transduction of some sensory signal as a part." [FBC:DOS] +def: "Sensillum which is embedded in the body wall and has a specific cuticular structure involved in the transduction of some sensory signal as a part." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007231 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0002536 ! arthropod sensillum is_a: UBERON:6005168 ! insect external sensory organ @@ -418358,7 +422936,7 @@ is_a: UBERON:6007231 ! insect external sensillum [Term] id: UBERON:6007233 name: insect internal sensillum -def: "Sensillum that is internal to the animal - i.e. having no part that is part of the cuticle." [FBC:DOS] +def: "Sensillum that is internal to the animal - i.e. having no part that is part of the cuticle." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007233 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0002536 ! arthropod sensillum is_a: UBERON:6007373 ! insect internal sense organ @@ -418419,7 +422997,7 @@ relationship: part_of UBERON:6001730 ! insect larval head [Term] id: UBERON:6007284 name: insect region of integument -def: "A region of cuticle and its underlying epidermis." [FBC:DOS] +def: "A region of cuticle and its underlying epidermis." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007284 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0011216 ! organ system subdivision relationship: in_taxon NCBITaxon:50557 ! Insecta @@ -418428,7 +423006,7 @@ relationship: part_of UBERON:0002416 ! integumental system [Term] id: UBERON:6007285 name: insect segmental subdivision of integument -def: "A segmental subdivision of the integument of the whole animal." [FBC:DOS] +def: "A segmental subdivision of the integument of the whole animal." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007285 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:6007284 ! insect region of integument @@ -418447,7 +423025,7 @@ is_a: UBERON:6007284 ! insect region of integument [Term] id: UBERON:6007331 name: insect segmental subdivision of organ system -def: "The part of some organism that is part of some specified segment." [FBC:DOS] +def: "The part of some organism that is part of some specified segment." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007331 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0011216 ! organ system subdivision relationship: in_taxon NCBITaxon:50557 ! Insecta @@ -418455,7 +423033,7 @@ relationship: in_taxon NCBITaxon:50557 ! Insecta [Term] id: UBERON:6007373 name: insect internal sense organ -def: "Sense organ that is internal to the animal - i.e. having no part that is part of the cuticle." [FBC:DOS] +def: "Sense organ that is internal to the animal - i.e. having no part that is part of the cuticle." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007373 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0000020 ! sense organ relationship: in_taxon NCBITaxon:50557 ! Insecta @@ -418463,7 +423041,7 @@ relationship: in_taxon NCBITaxon:50557 ! Insecta [Term] id: UBERON:6007424 name: insect epithelial furrow -def: "A region of an epithelium that folds inwards from the epithelial plane to form a furrow." [FBC:DOS] +def: "A region of an epithelium that folds inwards from the epithelial plane to form a furrow." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00007424 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0000483 ! epithelium relationship: in_taxon NCBITaxon:50557 ! Insecta @@ -418536,7 +423114,7 @@ relationship: in_taxon NCBITaxon:6656 {source="https://github.com/obophenotype/u [Term] id: UBERON:6040003 name: insect non-connected developing system -def: "The sum of all the anlagen and primordia that will develop into a single system." [FBC:DOS] +def: "The sum of all the anlagen and primordia that will develop into a single system." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00040003 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0005423 ! developing anatomical structure is_a: UBERON:0034923 ! disconnected anatomical group @@ -418547,7 +423125,7 @@ id: UBERON:6040005 name: insect synaptic neuropil def: "The part of the neuropil consisting largely of synapsing neuron projections." [FlyBase:FBrf0224194] xref: FBbt:00040005 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} -is_a: UBERON:0000465 ! material anatomical entity +is_a: UBERON:0000001 ! gross anatomical part relationship: in_taxon NCBITaxon:50557 ! Insecta relationship: part_of UBERON:0002606 ! neuropil @@ -418564,7 +423142,7 @@ relationship: part_of UBERON:6040005 ! insect synaptic neuropil [Term] id: UBERON:6041000 name: insect synaptic neuropil block -def: "A closely associated group of synaptic neuropil domains." [FBC:DOS, FBC:KI] +def: "A closely associated group of synaptic neuropil domains." [FBC:KI, https://orcid.org/0000-0002-7073-9172] synonym: "level 1 neuropil" EXACT [FlyBase:FBrf0224194] xref: FBbt:00041000 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0034923 ! disconnected anatomical group @@ -418580,7 +423158,7 @@ consider: UBERON:0011676 [Term] id: UBERON:6100153 name: insect sensilla row -def: "A row of sensilla." [FBC:DOS] +def: "A row of sensilla." [https://orcid.org/0000-0002-7073-9172] xref: FBbt:00100153 {sssom:mapping_justification="https://w3id.org/semapv/vocab/ManualMappingCuration"} is_a: UBERON:0034926 ! anatomical row relationship: composed_primarily_of UBERON:0002536 ! arthropod sensillum @@ -419553,6 +424131,33 @@ relationship: part_of UBERON:0001676 ! occipital bone relationship: part_of UBERON:0001678 ! temporal bone property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/2882" xsd:anyURI +[Term] +id: UBERON:7500131 +name: facial crest +def: "A ridge or similar projection on the lateral side of the cranium that crosses the zygomatic bone and extends to the maxilla and ends on the facial tubercle (tuber faciale)." [https://orcid.org/0000-0001-8415-4848] +subset: human_subset +subset: mouse_subset +synonym: "crista facialis" EXACT [] +is_a: UBERON:4100000 ! skeletal element projection +is_a: UBERON:4200133 ! crest +relationship: part_of UBERON:0002397 ! maxilla +relationship: part_of UBERON:0004654 ! temporal process of zygomatic bone +property_value: curator_notes "very prominent in ruminants and equids; short in carnivorans and pigs: https://www.imaios.com/en/vet-anatomy/anatomical-structures/facial-crest-11073890400#" xsd:string +property_value: dc-contributor "https://orcid.org/0000-0003-2699-3066" xsd:string + +[Term] +id: UBERON:7770000 +name: suprasellar region +def: "The region of the cranial cavity above the sella turcica." [NCIT:C42602] +subset: human_subset +subset: mouse_subset +synonym: "entire suprasellar region" EXACT [SNOMEDCT:368554001] +synonym: "suprasellar part of cranial cavity" EXACT [FMA:322222] +is_a: UBERON:0034944 ! zone of organ +relationship: dc-contributor https://orcid.org/0000-0002-0819-0473 +relationship: located_in UBERON:0013411 ! cranial cavity +created_by: 0000-0002-0819-0473 + [Term] id: UBERON:7770005 name: ascending colon epithelium @@ -419750,6 +424355,71 @@ relationship: dc-contributor https://orcid.org/0000-0001-5208-3432 relationship: has_part UBERON:0002354 {source="https://github.com/obophenotype/uberon/issues/1785", source="https://orcid.org/0000-0001-5208-3432", source="https://orcid.org/0000-0002-9791-0064"} ! cardiac Purkinje fiber relationship: part_of UBERON:0004146 {source="https://github.com/obophenotype/uberon/issues/1785", source="https://orcid.org/0000-0001-5208-3432", source="https://orcid.org/0000-0002-9791-0064"} ! His-Purkinje system +[Term] +id: UBERON:8000010 +name: salivary gland ducto-acinar unit +def: "A lobule of a salivary gland consisting of the ducto-acinar unit and the secretory acini together with their contiguous ductal segments, including the intercalated duct and striated duct, together with associated myoepithelial cells, stromal tissue, and vasculature. This structural-functional unit is responsible for the production of primary saliva by the acinar cells and its ionic modification during transit through the ductal segments." [PMID:24862590, PMID:30855909] +comment: Also known as the "salivon" in classical salivary physiology literature. The three major salivary glands (parotid, submandibular, sublingual) contain gland-specific variants of this unit that differ in acinar cell composition (serous vs. mucous vs. mixed). +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +synonym: "salivary gland ducto-acinar" RELATED [] +synonym: "salivon" EXACT [] +is_a: UBERON:0000063 ! organ subunit +relationship: part_of UBERON:0001044 ! saliva-secreting gland +relationship: part_of UBERON:0009911 ! lobule +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3657" xsd:anyURI + +[Term] +id: UBERON:8000011 +name: parotid gland ducto-acinar unit +def: "A salivary gland ducto-acinar unit that is part of the parotid gland, consisting of purely serous acini together with their contiguous intercalated and striated ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a watery, protein-rich serous saliva." [PMID:24862590, PMID:30855909] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +synonym: "parotid gland ducto-acinar" RELATED [] +is_a: UBERON:8000010 ! salivary gland ducto-acinar unit +relationship: part_of UBERON:0001831 ! parotid gland +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3657" xsd:anyURI + +[Term] +id: UBERON:8000012 +name: sublingual gland ducto-acinar unit +def: "A salivary gland ducto-acinar unit that is part of the sublingual gland, consisting of predominantly mucous acini (with minor serous demilunes) together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a viscous, mucin-rich saliva." [PMID:24862590, PMID:30855909] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +synonym: "sublingual gland ducto-acinar" RELATED [] +is_a: UBERON:8000010 ! salivary gland ducto-acinar unit +relationship: part_of UBERON:0001832 ! sublingual gland +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3657" xsd:anyURI + +[Term] +id: UBERON:8000013 +name: submandibular gland ducto-acinar unit +def: "A salivary gland ducto-acinar unit that is part of the submandibular gland, consisting of a mixture of predominantly serous acini with a minority of mucous acini, together with their contiguous ductal segments, and associated myoepithelial cells, stromal tissue, and vasculature. This unit produces a mixed serous-mucous saliva." [PMID:24862590, PMID:30855909] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +synonym: "submandibular gland ducto-acinar" RELATED [] +is_a: UBERON:8000010 ! salivary gland ducto-acinar unit +relationship: part_of UBERON:0001736 ! submandibular gland +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3657" xsd:anyURI + +[Term] +id: UBERON:8000014 +name: dentogingival junction +def: "A multi-tissue anatomical complex that constitutes the attachment zone between the gingival tissue and the tooth surface, comprising the junctional epithelium, the supracrestal connective tissue attachment fibers, and supporting stromal and vascular elements. This structure seals the periodontal space from the oral cavity and serves as the primary physical and biological interface anchoring the free and attached gingiva to the tooth." [ISBN:9780323096300, PMID:38876998] +subset: added_by_HRA +subset: human_subset +subset: mouse_subset +synonym: "dentogingival complex" RELATED [] +synonym: "gingival attachment" RELATED [] +synonym: "supracrestal tissue attachment" RELATED [] +is_a: UBERON:0007651 ! anatomical junction +relationship: part_of UBERON:0001828 ! gingiva +property_value: term_tracker_item "https://github.com/obophenotype/uberon/issues/3657" xsd:anyURI + [Term] id: UBERON:8200002 name: copepodite stage 1 @@ -424241,6 +428911,43 @@ is_a: UBERON:0006983 ! anatomical point relationship: dc-contributor https://orcid.org/0000-0001-8415-4848 relationship: part_of UBERON:0001697 ! orbit of skull +[Term] +id: UBERON:8500005 +name: facial tubercle +def: "The facial tuberosity (tuber faciale) is a prominence located on the facial surface of the maxilla; it finishes the facial crest and varies much according to the species." [https://www.imaios.com/en/vet-anatomy/anatomical-structure/facial-tuberosity-11073890408] +subset: human_subset +subset: mouse_subset +synonym: "tuber faciale" EXACT [] +is_a: UBERON:0005813 ! tubercle +is_a: UBERON:4100000 ! skeletal element projection +intersection_of: UBERON:0005813 ! tubercle +intersection_of: part_of UBERON:0002397 ! maxilla +relationship: dc-contributor https://orcid.org/0000-0001-8415-4848 +relationship: part_of UBERON:0002397 ! maxilla +property_value: curator_notes "it is well developed in equids; it is above the first molar tooth in ruminants; it is above the second molar tooth in sheep" xsd:string + +[Term] +id: UBERON:8500006 +name: nasal notch +def: "Anatomical point of cranium between nasal process of premaxilla and nasal bone, at the anteriormost end of the suture." [isbn:9783830410690] +subset: human_subset +subset: mouse_subset +synonym: "nasoincisive notch" EXACT [] +is_a: UBERON:0006983 ! anatomical point +relationship: part_of UBERON:0001681 ! nasal bone +relationship: part_of UBERON:0002244 ! premaxilla +property_value: dc-contributor "https://orcid.org/0000-0001-8415-4848" xsd:string + +[Term] +id: UBERON:8500007 +name: staphylon +def: "Anatomical point of cranium; the most aboral point of the horizontal part of the palate in the median plane." [isbn:9780873659505] +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006983 ! anatomical point +relationship: part_of UBERON:0012071 ! palate bone +property_value: dc-contributor "https://orcid.org/0000-0001-8415-4848" xsd:string + [Term] id: UBERON:8600000 name: lobular bronchiole @@ -426666,6 +431373,18 @@ relationship: dc-contributor https://orcid.org/0009-0005-7919-4905 relationship: part_of UBERON:0001043 ! esophagus property_value: dcterms-date "2024-11-14T15:00:21Z" xsd:dateTime +[Term] +id: UBERON:8700003 +name: stratum corneum of esophageal epithelium +def: "The outermost layer of the stratified squamous epithelium lining the esophagus, composed of several layers of flattened epithelial cells that are partially or non-keratinized. This layer provides a protective barrier against mechanical and chemical insults, contributing to tissue integrity and regulating permeability through its apical cell membranes and intercellular junctional complexes." [doi:10.1038/gimo15, doi:10.1152/ajpgi.00088.2015, https://en.wikipedia.org/wiki/Stratified_squamous_epithelium, PMID:21126700, PMID:26019440] +subset: human_subset +subset: mouse_subset +is_a: UBERON:0006920 ! esophagus squamous epithelium +is_a: UBERON:0010304 ! non-keratinized stratified squamous epithelium +relationship: dc-contributor https://orcid.org/0009-0005-7919-4905 +relationship: part_of UBERON:0001043 ! esophagus +property_value: dcterms-date "2024-11-14T15:10:48Z" xsd:dateTime + [Term] id: UBERON:8850000 name: lumen of pulmonary alveolus @@ -426685,6 +431404,20 @@ relationship: luminal_space_of UBERON:0002299 ! alveolus of lung relationship: part_of UBERON:0002299 ! alveolus of lung property_value: dcterms-date "2024-06-28T10:50:18Z" xsd:dateTime +[Term] +id: UBERON:8850001 +name: epithelium of anorectum +def: "The epithelium that lines the anorectum." [PMID:27042391] +subset: human_subset +subset: mouse_subset +synonym: "anorectal epithelium" EXACT [PMID:27042391] +is_a: UBERON:0001278 ! epithelium of large intestine +intersection_of: UBERON:0000483 ! epithelium +intersection_of: part_of UBERON:8410050 ! anorectum +relationship: dc-contributor https://orcid.org/0009-0000-8480-9277 +relationship: part_of UBERON:8410050 ! anorectum +property_value: dcterms-date "2024-11-18T15:45:29Z" xsd:dateTime + [Term] id: UBERON:8900000 name: sensory corpuscle @@ -428914,6 +433647,86 @@ property_value: example_of_usage "A diagnostic testing device utilizes a specime holds_over_chain: capable_of RO:0002233 creation_date: 2021-11-08T12:00:00Z +[Typedef] +id: RO:0018030 +name: chemical relationship +property_value: curator_notes "Do not use this relation directly. It is intended as a grouping for a diverse set of relations, in which the subject or object is a chemical." xsd:string + +[Typedef] +id: RO:0018033 +name: is deprotonated form of +def: "A is a deprotonated form of B if and only if A is chemical entity that is a Brønsted–Lowry Base (i.e., can receive a proton) and by adding some nonzero number of protons transforms it into B.\n\nThis is a transitive relationship and follows this design pattern: https://oborel.github.io/obo-relations/direct-and-indirect-relations." [] +xref: obo:chebi#is_conjugate_base_of +property_value: example_of_usage "(E)-cinnamoyl-CoA(4-) (CHEBI:57252) is a deprotonated form (E)-cinnamoyl-CoA (CHEBI:10956), which involves removing four protons." xsd:string +property_value: seeAlso https://github.com/oborel/obo-relations/issues/643 +is_transitive: true +is_a: RO:0018030 ! chemical relationship +inverse_of: RO:0018034 ! is protonated form of + +[Typedef] +id: RO:0018034 +name: is protonated form of +def: "A is a protonated form of B if and only if A is chemical entity that is a Brønsted–Lowry Acid (i.e., can give up a proton) and by removing some nonzero number of protons transforms it into B.\n\nThis is a transitive relationship and follows this design pattern: https://oborel.github.io/obo-relations/direct-and-indirect-relations." [] +xref: obo:chebi#is_conjugate_acid_of +property_value: example_of_usage "(E)-cinnamoyl-CoA (CHEBI:10956) is a protonated form of (E)-cinnamoyl-CoA(4-) (CHEBI:57252), which involves adding four protons." xsd:string +property_value: seeAlso https://github.com/oborel/obo-relations/issues/643 +is_transitive: true +is_a: RO:0018030 ! chemical relationship + +[Typedef] +id: RO:0018036 +name: is tautomer of +def: "Two chemicals are tautomers if they can be readily interconverted.\n\nThis commonly refers to prototropy in which a hydrogen's position is changed, such as between ketones and enols. This is also often observed in heterocyclic rings, e.g., ones containing nitrogens and/or have aryl functional groups containing heteroatoms." [] +synonym: "is desmotrope of" EXACT [] +xref: obo:chebi#is_tautomer_of +property_value: dcterms-date "2023-03-18T23:49:31Z" xsd:dateTime +property_value: example_of_usage "3-carboxy-3-mercaptopropanoate (CHEBI:38707) is tautomer of 1,2-dicarboxyethanethiolate (CHEBI:38709) because 3-carboxy-3-mercaptopropanoate is deprotonated on the carboxylic acid whereas 1,2-dicarboxyethanethiolate is deprotonated on the secondary thiol." xsd:string {seeAlso="CHEBI:38707", seeAlso="CHEBI:38709"} +property_value: seeAlso https://github.com/oborel/obo-relations/issues/697 +is_symmetric: true +is_a: RO:0018030 ! chemical relationship + +[Typedef] +id: RO:0018037 +name: is substitutent group from +def: "Group A is a substituent group from Chemical B if A represents the functional part of A and includes information about where it is connected. A is not itself a chemical with a fully formed chemical graph, but is rather a partial graph with one or more connection points that can be used to attach to another chemical graph, typically as a functionalization." [] +xref: obo:chebi#is_substituent_group_from +property_value: dcterms-date "2023-03-18T23:49:31Z" xsd:dateTime +property_value: example_of_usage "carboxylatoacetyl group (CHEBI:58957) is substituent group from malonate(1-) (CHEBI:30795)" xsd:string {seeAlso="CHEBI:30795", seeAlso="CHEBI:58957"} +property_value: seeAlso https://github.com/oborel/obo-relations/issues/697 +is_a: RO:0018030 ! chemical relationship + +[Typedef] +id: RO:0018038 +name: has functional parent +def: "Chemical A has functional parent Chemical B if there is chemical transformation through which chemical B can be produced from chemical A. \n\nFor example, the relationship between a salt and a freebased compound is a \"has functional parent\" relationship." [] +xref: obo:chebi#has_functional_parent +property_value: dcterms-date "2023-03-18T23:49:31Z" xsd:dateTime +property_value: example_of_usage "hydrocortamate hydrochloride (CHEBI:50854) has parent hydride hydrocortamate (CHEBI:50851)" xsd:string {seeAlso="CHEBI:50851", seeAlso="CHEBI:50854"} +property_value: seeAlso https://github.com/oborel/obo-relations/issues/697 +is_a: RO:0018030 ! chemical relationship + +[Typedef] +id: RO:0018039 +name: is enantiomer of +def: "Chemicals A and B are enantiomers if they share the same molecular graph except the change of the configuration of substituents around exactly one chiral center.\n\nA chemical with no chiral centers can not have an enantiomer. A chemical with multiple chiral centers can have multiple enantiomers, but its enantiomers are not themselves enantiomers (they are diastereomers)." [] +synonym: "is optical isomer of" EXACT [] +xref: obo:chebi#is_enantiomer_of +property_value: dcterms-date "2023-03-18T23:49:31Z" xsd:dateTime +property_value: example_of_usage "dexmedetomidine hydrochloride (CHEBI:31472) is enantiomer of levomedetomidine hydrochloride (CHEBI:48557) because the stereochemistry of the central chiral carbon is swapped." xsd:string {comment="CHEBI:48557", seeAlso="CHEBI:31472"} +property_value: seeAlso https://github.com/oborel/obo-relations/issues/697 +is_symmetric: true +is_a: RO:0018030 ! chemical relationship + +[Typedef] +id: RO:0018040 +name: has parent hydride +def: "Chemical A has parent hydride Chemical B if there exists a molecular graphical transformation where functional groups on A are replaced with hydrogens in order to yield B." [] +xref: obo:chebi#has_parent_hydride +property_value: dcterms-date "2023-03-18T23:49:31Z" xsd:dateTime +property_value: example_of_usage "pyranine (CHEBI:52083) has parent hydride pyrene (CHEBI:39106). Pyrene is molecule with four fused benzene rings, whereas pyranine has the same core ring structure with additional sulfates." xsd:string {seeAlso="CHEBI:39106", seeAlso="CHEBI:52083"} +property_value: seeAlso https://github.com/oborel/obo-relations/issues/697 +is_a: RO:0018030 ! chemical relationship + [Typedef] id: RO:0019000 name: regulates characteristic @@ -429101,7 +433914,7 @@ name: by_means [Typedef] id: capable_of name: capable of -def: "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. " [] +def: "A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process." [] subset: ro-eco xref: RO:0002215 property_value: curator_notes "For compatibility with BFO, this relation has a shortcut definition in which the expression \"capable of some P\" expands to \"bearer_of (some realized_by only P)\"." xsd:string @@ -430602,6 +435415,7 @@ is_metadata_tag: true id: subdivision_of name: subdivision of comment: placeholder relation. X = 'subdivision of A' and subdivision_of some B means that X is the mereological sum of A and B +is_a: part_of ! part of [Typedef] id: superficial_to