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UlrikeS91 May 6, 2024
9d76b91
Update and rename application_vnd.mearec.jsonld to application_vnd.me…
UlrikeS91 May 6, 2024
6d5e491
Create application_vnd.neuralensemble.neo+pickle.jsonld
UlrikeS91 May 6, 2024
08ae5f4
Update application_vnd.alphaomega.v0-eng.jsonld
UlrikeS91 May 6, 2024
f5a1269
Update application_vnd.neuralensemble.neo+pickle.jsonld
UlrikeS91 May 6, 2024
2a901a1
Update application_vnd.klustakwik.jsonld
UlrikeS91 May 6, 2024
cdea0ab
Update application_vnd.axona.jsonld
UlrikeS91 May 6, 2024
b868a8b
Create euroscope.jsonld
UlrikeS91 May 6, 2024
62c096e
Update application_vnd.neuroscope.jsonld
UlrikeS91 May 6, 2024
abec208
Delete instances/latest/contentTypes/euroscope.jsonld
UlrikeS91 May 6, 2024
453caf0
Update application_vnd.neuroshareapi.jsonld
UlrikeS91 May 6, 2024
e6718ca
Create application_vnd.neuroshare.types.jsonld
UlrikeS91 May 6, 2024
48ef6e4
Create application_vnd.numpy.array.jsonld
UlrikeS91 May 6, 2024
c41ac1d
Create application_vnd.numpy.multiarray.jsonld
UlrikeS91 May 6, 2024
19942cc
Update application_vnd.openephys.jsonld
UlrikeS91 May 6, 2024
3a3c793
Create application_vnd.phy.jsonld
UlrikeS91 May 6, 2024
f622412
Update and rename application_vnd.spike2.sonpy.son.jsonld to applicat…
UlrikeS91 May 6, 2024
30917be
Create application_vnd.spike2-64.sonpy.son.jsonld
UlrikeS91 May 6, 2024
d597961
Update application_vnd.spike2-64.sonpy.son.jsonld
UlrikeS91 May 6, 2024
4bd96ce
Create application_vnd.spikegadgets.jsonld
UlrikeS91 May 6, 2024
432bf0b
Update application_vnd.spikeglx.system.jsonld
UlrikeS91 May 6, 2024
7e5c417
Update application_vnd.tdt.jsonld
UlrikeS91 May 6, 2024
79ed0a4
Update application_vnd.alphaomega.v0-eng.jsonld
lzehl Oct 17, 2024
1a87f02
Update application_vnd.axona.jsonld
lzehl Oct 17, 2024
21815ba
Update application_vnd.biocam+hdf5.jsonld
lzehl Oct 17, 2024
f015b4c
Update application_vnd.klustakwik.jsonld
lzehl Oct 17, 2024
79da225
Update application_vnd.maxwell+hdf5.jsonld
lzehl Oct 17, 2024
828f2c3
Update application_vnd.mearec+hdf5.jsonld
lzehl Oct 17, 2024
98f43f3
Update application_vnd.neuralensemble.neo+pickle.jsonld
lzehl Oct 17, 2024
3fd95bd
Update application_vnd.neuroscope.jsonld
lzehl Oct 17, 2024
1319ed2
Update application_vnd.neuroshare.types.jsonld
lzehl Oct 17, 2024
e57ab16
Update application_vnd.neuroshareapi.jsonld
lzehl Oct 17, 2024
12796ef
Update application_vnd.numpy.array.jsonld
lzehl Oct 17, 2024
a0949cf
Update application_vnd.numpy.multiarray.jsonld
lzehl Oct 17, 2024
a25fd40
Update application_vnd.openephys.jsonld
lzehl Oct 17, 2024
f11139b
Update application_vnd.phy.jsonld
lzehl Oct 17, 2024
778d385
Update application_vnd.spike2-32.sonpy.son.jsonld
lzehl Oct 17, 2024
962a4c8
Update application_vnd.spike2-64.sonpy.son.jsonld
lzehl Oct 17, 2024
0570472
Update application_vnd.spikegadgets.jsonld
lzehl Oct 17, 2024
ff113c9
Update application_vnd.spikeglx.system.jsonld
lzehl Oct 17, 2024
4d4d33b
Update application_vnd.tdt.jsonld
lzehl Oct 17, 2024
7b8d809
solving conflicts
lzehl Oct 17, 2024
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Original file line number Diff line number Diff line change
@@ -0,0 +1,18 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.alphaomega.v0-eng",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".lsx",
".mpx"
],
"name": "application/vnd.alphaomega.v0-eng",

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Suggested change
"name": "application/vnd.alphaomega.v0-eng",
"name": "application/vnd.alphaomega-eng.v0",

if -eng belongs to the company name and v0 points to the version it should be this way around, no? @apdavison

"relatedMediaType": null,
"specification": null,
"synonym": null
}
20 changes: 20 additions & 0 deletions instances/latest/contentTypes/application_vnd.axona.jsonld
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.axona",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".bin",
".set"
],
"name": "application/vnd.axona",
"relatedMediaType": null,
"specification": null,
"synonym": [
"Axona Format"
]
}
20 changes: 20 additions & 0 deletions instances/latest/contentTypes/application_vnd.biocam+hdf5.jsonld
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.biocam+hdf5",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".hdf5",
".h5"
],
"name": "application/vnd.biocam+hdf5",
"relatedMediaType": null,
"specification": null,
"synonym": [
"Biocam HDF5"
]
}
37 changes: 21 additions & 16 deletions instances/latest/contentTypes/application_vnd.klustakwik.jsonld
Original file line number Diff line number Diff line change
@@ -1,17 +1,22 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.klustakwik",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,
"name": "application/vnd.klustakwik",
"relatedMediaType": null,
"specification": null,
"synonym": [
"KlustaKwik Format"
]
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.klustakwik",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".fet",
".clu",
".res",
".spk"
],
"name": "application/vnd.klustakwik",
"relatedMediaType": null,
"specification": null,
"synonym": [
"KlustaKwik Format"
]
}
21 changes: 21 additions & 0 deletions instances/latest/contentTypes/application_vnd.maxwell+hdf5.jsonld
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.maxwell+hdf5",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".hdf5",
".h5"
],
"name": "application/vnd.maxwell+hdf5",
"relatedMediaType": null,
"specification": null,
"synonym": [
"MaxOne HDF5",
"MaxTwo HDF5"
]
Comment on lines +17 to +20

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this is a bit weird, MaxOne and MaxTwo are different MEA systems. If they are using the same file format the synonym of the file format should not be combined with the system name (unless this is what they officially do). I would suggest calling this MaxWell HDF5, or MaxWell Biosystems HDF5

}
21 changes: 21 additions & 0 deletions instances/latest/contentTypes/application_vnd.mearec+hdf5.jsonld
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.mearec+hdf5",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".hdf5",
".h5"
],
"name": "application/vnd.mearec+hdf5",
"relatedMediaType": null,
"specification": null,
"synonym": [
"Multi-Electrode-Arrays HDF5",
"MEA HDF5"
]
}
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.neuralensemble.neo+pickle",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".pkl",
".pickle"
],
"name": "application/vnd.neuralensemble.neo+pickle",
"relatedMediaType": null,
"specification": null,
"synonym": [
"Pickled Neo Format"
]
}
Original file line number Diff line number Diff line change
Expand Up @@ -7,11 +7,16 @@
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,
"fileExtension": [
".clu",
".res",
".ext.evt",
".evt.ext"
],
"name": "application/vnd.neuroscope",
"relatedMediaType": null,
"specification": null,
"synonym": [
"NeuroScope format files"
"NeuroScope Format"
]
}
Original file line number Diff line number Diff line change
@@ -0,0 +1,15 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.neuroshare.types",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,

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No extension? is this not a content type for files but for bundles?

"name": "application/vnd.neuroshare.types",
"relatedMediaType": null,
"specification": null,
"synonym": null
}
Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,13 @@
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.neuroshareapi",
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.neuroshare.api",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,

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no extensions? is this for bundles not for files?

"name": "application/vnd.neuroshareapi",
"name": "application/vnd.neuroshare.api",
"relatedMediaType": null,
"specification": null,
"synonym": [
Expand Down
19 changes: 19 additions & 0 deletions instances/latest/contentTypes/application_vnd.numpy.array.jsonld
Original file line number Diff line number Diff line change
@@ -0,0 +1,19 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.numpy.array",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": "A standard binary file format in NumPy for persisting a single arbitrary NumPy array on disk.",
"displayLabel": null,
"fileExtension": [
".npy"
],
"name": "application/vnd.numpy.array",
"relatedMediaType": null,
"specification": null,
"synonym": [
"NumPy array"
]
}
Original file line number Diff line number Diff line change
@@ -0,0 +1,19 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.numpy.multiarray",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": "File format by numpy that provides storage of array data using gzip compression.",

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Suggested change
"description": "File format by numpy that provides storage of array data using gzip compression.",
"description": "A compressed archive format used by NumPy to store a collection of individual NumPy arrays (.npy files) in a single zip archive file.",

"displayLabel": null,
"fileExtension": [
".npz"
],
"name": "application/vnd.numpy.multiarray",

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@apdavison should this be ?

Suggested change
"name": "application/vnd.numpy.multiarray",
"name": "application/vnd.numpy.multiarray+zip",

"relatedMediaType": null,
"specification": null,
"synonym": [
"NumPy multiarray"
]
}
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,11 @@
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,
"fileExtension": [

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is this really one content type? or rather different ones?

".dat",
".npy",
".json"
],
"name": "application/vnd.openephys",
"relatedMediaType": null,
"specification": null,
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -2,19 +2,18 @@
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.mearec",
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.phy",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".h5"
".npy"
],
"name": "application/vnd.mearec",
"name": "application/vnd.phy",
"relatedMediaType": null,
"specification": null,
"synonym": [
"Multi-Electrode-Arrays",
"MEA"
"phy files"
]
}
Original file line number Diff line number Diff line change
@@ -0,0 +1,19 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.spike2-32.sonpy.son",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".smr"
],
"name": "application/vnd.spike2-32.sonpy.son",

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Suggested change
"name": "application/vnd.spike2-32.sonpy.son",
"name": "application/vnd.spike2.sonpy-binary32",

what was the .son for?

we need to define a convention of bitness for our content types

"relatedMediaType": null,
"specification": null,
"synonym": [
"CED spike2 files (32 bit)"
]
}
Original file line number Diff line number Diff line change
@@ -0,0 +1,19 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.spike2-64.sonpy.son",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".smrx"
],
"name": "application/vnd.spike2-64.sonpy.son",

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convention for bitness should be different I think (see spike2-32)

"relatedMediaType": null,
"specification": null,
"synonym": [
"CED spike2 files (64 bit)"
]
}
Original file line number Diff line number Diff line change
Expand Up @@ -2,18 +2,18 @@
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.spike2.sonpy.son",
"@id": "https://openminds.om-i.org/instances/contentTypes/application_vnd.spikegadgets",
"@type": "https://openminds.om-i.org/types/ContentType",
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": [
".smr"
".rec"
],
"name": "application/vnd.spike2.sonpy.son",
"name": "application/vnd.spikegadgets",
"relatedMediaType": null,
"specification": null,
"synonym": [
"CED spike2 files"
"SpikeGadget system"
]
}
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,10 @@
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,
"fileExtension": [
".bin",

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Isn't .bin generic? should we be more specific using the stream names? that is,.ap.bin, .lf.bin and .nidq.bin? Unless the system allows user-defined stream name.

".meta"
],
"name": "application/vnd.spikeglx.system",
"relatedMediaType": null,
"specification": null,
Expand Down
7 changes: 6 additions & 1 deletion instances/latest/contentTypes/application_vnd.tdt.jsonld
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,12 @@
"dataType": null,
"description": null,
"displayLabel": null,
"fileExtension": null,
"fileExtension": [
".tsq",
".tbk",
".tev",
".sev"
Comment on lines +11 to +14

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Suggested change
".tsq",
".tbk",
".tev",
".sev"
".tsq",
".tbk",
".Tbk",
".Tdx",
".tev",
".tnt",
".sev"

],
"name": "application/vnd.tdt",
"relatedMediaType": null,
"specification": null,
Expand Down