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Paint4Net Update - Resubmitted#2649

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farid-zare merged 15 commits into
opencobra:developfrom
ruitvrs:master
Apr 24, 2026
Merged

Paint4Net Update - Resubmitted#2649
farid-zare merged 15 commits into
opencobra:developfrom
ruitvrs:master

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@ruitvrs
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@ruitvrs ruitvrs commented Apr 20, 2026

Modifications made to Paint4Net in order to not rely on the Biograph function (now depreciated) for users who have more recent MatLab Versions (2023 +). Main functions (draw_by_rxn, draw_by_met)now utilise the digraph() function, but for users using older versions of MatLab with access to Biograph, the old functions have been preserved as bio_draw_by_rxn & bio_draw_by_met.

Tests that rely on Biograph only work when using MatLab that has Biograph available. New functions should work on all versions.

Main files changed for users with more recent versions of MatLab and others added for testing and maintaining function for users with access to Biograph.

Deleted Last Pull Request to make fresh fork and resubmitting here.

I hereby confirm that I have:

  • Tested my code on my own machine
  • Followed the guidelines in the Contributing Guide
  • Selected develop as a target branch (top left drop-down menu)

ruitvrs and others added 3 commits April 20, 2026 21:05
Modifications made to Paint4Net in order to not rely on the Biograph function (now depreciated) for users who have more recent MatLab Versions (2023 +). Main functions (draw_by_rxn, draw_by_met)now utilise the digraph() function, but for users using older versions of MatLab with access to Biograph, the old functions have been preserved as bio_draw_by_rxn & bio_draw_by_met.

Tests that rely on Biograph only work when using MatLab that has Biograph available. New functions should work on all versions.

Main files changed for users with more recent versions of MatLab and others added for testing and maintaining function for users with access to Biograph.
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Summary:

Tests 📝 Passed ✅ Failed ❌ Skipped ⏭️
257 222 0 35

Failed Tests:

No failed tests ✨

Github Test Reporter by CTRF 💚

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Summary:

Tests 📝 Passed ✅ Failed ❌ Skipped ⏭️
257 222 0 35

Failed Tests:

No failed tests ✨

Github Test Reporter by CTRF 💚

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Summary:

Tests 📝 Passed ✅ Failed ❌ Skipped ⏭️
257 222 0 35

Failed Tests:

No failed tests ✨

Github Test Reporter by CTRF 💚

@github-actions
Copy link
Copy Markdown
Contributor

Summary:

Tests 📝 Passed ✅ Failed ❌ Skipped ⏭️
257 222 0 35

Failed Tests:

No failed tests ✨

Github Test Reporter by CTRF 💚

@farid-zare farid-zare merged commit 944cca3 into opencobra:develop Apr 24, 2026
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2 participants