Skip to content

@MaayanLab Ma'ayan Lab

Change the repository type filter

All

    Repositories list

    391 repositories

    • Playbook-Workflow-Builder

      Public
      A repository for the Playbook Workflow Builder project.
      workflowdata-sciencebioinformatics
      workflowdata-sciencebioinformaticsgene-setsbiologysystems-biologygene-expressiongene-ontologyproteomicscwl
      TypeScript
      •
      Creative Commons Attribution 4.0 International
      •21•28•41•1•Updated Jun 5, 2026Jun 5, 2026

    • DRC-Portals

      Public
      This repo has the code for the CFDE Workbench. The workbench serves the CFDE Information Portal and the CFDE Data Portal
      ot2od036435
      ot2od036435
      TypeScript
      •0•1•11•2•Updated Jun 5, 2026Jun 5, 2026

    • PFOCRummage

      Public
      PLpgSQL
      •
      Other
      •4•1•0•0•Updated Jun 4, 2026Jun 4, 2026

    • proxy

      Public
      A convenient and generic proxy image
      Shell
      •
      Apache License 2.0
      •1•0•0•0•Updated Jun 4, 2026Jun 4, 2026

    • gsfm-predictions

      Public
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•2•0•Updated Jun 1, 2026Jun 1, 2026

    • chea_kg_ts_appyter

      Public
      JavaScript
      •0•0•2•0•Updated May 28, 2026May 28, 2026

    • ChEA-KG-UI

      Public
      Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighb…
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •19•1•0•0•Updated May 28, 2026May 28, 2026

    • blitzgsea

      Public
      Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estima…
      Jupyter Notebook
      •
      Apache License 2.0
      •11•64•1•0•Updated May 26, 2026May 26, 2026

    • appyter-catalog

      Public
      A catalog of appyter notebooks
      Jupyter Notebook
      •
      Other
      •50•42•25•5•Updated May 19, 2026May 19, 2026

    • cfde-wheel

      Public
      Documentation for CFDE Navigation Wheel
      TypeScript
      •
      Other
      •2•1•0•0•Updated May 15, 2026May 15, 2026

    • rummageo

      Public
      Jupyter Notebook
      •
      Other
      •4•5•1•0•Updated May 14, 2026May 14, 2026

    • L2S2

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •0•2•2•1•Updated May 14, 2026May 14, 2026

    • rummagene

      Public
      Python
      •
      Other
      •4•12•8•0•Updated May 14, 2026May 14, 2026

    • docker-base

      Public
      Ma'ayan Lab Base Docker Images
      Dockerfile
      •0•0•0•0•Updated May 5, 2026May 5, 2026

    • Enrichr-Viz-Appyter

      Public
      Appyter for enrichr canvases, scatter plots, and Manhattan plots
      Jupyter Notebook
      •2•0•3•1•Updated Apr 30, 2026Apr 30, 2026

    • marathon-haproxy-healthcheck

      Public
      A utility for checking the health of HAProxy routes and restarting haproxy if necessary
      Python
      •
      Apache License 2.0
      •0•0•0•1•Updated Apr 21, 2026Apr 21, 2026

    • helm-charts

      Public
      A repository for helm charts
      Go Template
      •0•0•0•0•Updated Apr 17, 2026Apr 17, 2026

    • kubernetes-auto-ingress

      Public
      Auto-generate kubernetes ingresses based on a deployment annotation.
      Python
      •
      Apache License 2.0
      •0•1•1•0•Updated Apr 17, 2026Apr 17, 2026

    • cfde-c2m2

      Public
      A collection of utilities for simplifying the C2M2 submission process.
      Python
      •1•3•3•0•Updated Apr 17, 2026Apr 17, 2026

    • drc-static

      Public
      Jupyter Notebook
      •0•0•0•1•Updated Apr 17, 2026Apr 17, 2026

    • gsfm

      Public
      The gene set foundation model training, evaluation, and benchmark code.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Apr 17, 2026Apr 17, 2026

    • ihdh_frontend

      Public
      Innovative Health Data Hub (IHDH) frontend
      JavaScript
      •0•0•6•0•Updated Mar 26, 2026Mar 26, 2026

    • maayanlab-bioinformatics

      Public
      A collection of useful functions for bioinformatics data analysis
      Python
      •
      Apache License 2.0
      •2•26•0•0•Updated Mar 19, 2026Mar 19, 2026

    • ChEA-KG

      Public
      Demo of how to build a transcription factor KG using the KG UI
      Jupyter Notebook
      •13•1•0•0•Updated Feb 24, 2026Feb 24, 2026

    • Knowledge-Graph-UI

      Public
      Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighb…
      neo4jneo4j-databaseknowledge-graph
      neo4jneo4j-databaseknowledge-graphcytoscapenetworksuser-interfacegeneset-enrichmentcytoscapejscypher-query-languagenetworkscience
      TypeScript
      •
      Other
      •19•21•5•1•Updated Feb 18, 2026Feb 18, 2026

    • D2H2-site

      Public
      HTML
      •
      Other
      •0•0•1•1•Updated Feb 17, 2026Feb 17, 2026

    • appyter

      Public
      jinja2-enabled jupyter notebooks
      Python
      •
      Other
      •6•37•15•14•Updated Feb 13, 2026Feb 13, 2026

    • k8s-docs

      Public
      Ma'ayanlab k8s server admin and user guide
      Python
      •
      Other
      •1•0•0•0•Updated Feb 6, 2026Feb 6, 2026

    • HarmonizomePythonScripts

      Public
      Jupyter Notebook
      •11•29•0•1•Updated Feb 6, 2026Feb 6, 2026

    • xalign

      Public
      Hassle-free RNA-seq alignment
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Jan 28, 2026Jan 28, 2026
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.