Repositories list

• siamize

  Public
  Native C++/ONNX port of SIAM v0.3 brain segmentation

  C++

  •

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 24, 2026May 24, 2026

• jsonlab

  Public
  JSONLab: compact, portable, robust JSON/binary-JSON encoder/decoder for MATLAB/Octave

  encodingserializationjson+ 14

  encodingserializationjsonbinary-datamatlabdecodinghdf5messagepackubjsonhierarchical-data+ 7

  MATLAB

  •

  BSD 3-Clause "New" or "Revised" License

  •120120 forks•320320 stars•00 issues•00 pull requests•Updated May 23, 2026May 23, 2026

• jnifty

  Public
  Portable MATLAB/Octave toolbox for reading/writing NIFTI-1/2 and JNIFTI files

  parserjsonencoder+ 7

  parserjsonencoderdecodermatlaboctaveneuroimagingnifti-formatnihjnifti

  MATLAB

  •

  Other

  •22 forks•44 stars•11 issue•00 pull requests•Updated May 23, 2026May 23, 2026

• bjdata

  Public
  Binary JData Specification - a portable interchange format for complex binary data

  Python

  •22 forks•1111 stars•22 issues•11 pull request•Updated May 20, 2026May 20, 2026

• NeuroJSON_io

  Public
  NeuroJSON Data Portal

  TypeScript

  •00 forks•22 stars•77 issues•00 pull requests•Updated May 7, 2026May 7, 2026

• zmat

  Public
  ZMat: A portable C-library and MATLAB/Octave/Python toolbox for zlib/gzip/lzma/lz4/zstd/blosc2 data compression

  pythonjsonlibrary+ 12

  pythonjsonlibrarycompressionmatlabzlibtoolboxoctavein-memorymex+ 5

  C

  •

  GNU General Public License v3.0

  •66 forks•1515 stars•00 issues•00 pull requests•Updated May 5, 2026May 5, 2026

• json

  Public
  JSON for Modern C++

  C++

  •

  MIT License

  •7.4k7.4k forks•00 stars•00 issues•00 pull requests•Updated May 4, 2026May 4, 2026

• neuroj

  Public
  Utilities to convert datasets to JSON and access NeuroJSON.io

  Perl

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 28, 2026Apr 28, 2026

• jdata

  Public
  JData: a language-independent data annotation for portable storage and interchange

  serializationjsondata-structures+ 4

  serializationjsondata-structuresspecificationubjsonscientific-datainterchange-format

  99 forks•1717 stars•00 issues•00 pull requests•Updated Apr 21, 2026Apr 21, 2026

• oct-hdf5

  Public
  An interface to the HDF5 library for GNU Octave

  MATLAB

  •

  GNU General Public License v3.0

  •33 forks•00 stars•00 issues•00 pull requests•Updated Apr 15, 2026Apr 15, 2026

• jgifti

  Public
  JSON wrapper for GIFTI data files

  Apache License 2.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 10, 2026Apr 10, 2026

• jnifti

  Public
  A JSON/binary JSON extension to the NIfTI-1/2 formats

  pythonparserjson+ 11

  pythonparserjsondatabasenosqlencoderdecodermatlaboctaveneuroimaging+ 4

  66 forks•1010 stars•00 issues•00 pull requests•Updated Apr 10, 2026Apr 10, 2026

• pyjdata

  Public
  JData encoder and decoder for Python

  Python

  •

  Apache License 2.0

  •55 forks•88 stars•00 issues•00 pull requests•Updated Mar 3, 2026Mar 3, 2026

• pyiso2mesh

  Public
  Iso2Mesh for Python

  image-processingmeshmesh-generator+ 3

  image-processingmeshmesh-generatorsurface-meshsurface-mesh-simplificationtetrahedral-mesh

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •55 forks•1414 stars•11 issue•00 pull requests•Updated Feb 12, 2026Feb 12, 2026

• pybj

  Public
  Binary JSON (BJData/UBJSON) Support for Python

  jsonstreamencoder+ 3

  jsonstreamencoderdecoderfile-formatneuroimaging

  Python

  •

  Apache License 2.0

  •1515 forks•22 stars•00 issues•00 pull requests•Updated Jan 21, 2026Jan 21, 2026

• registry

  Public
  NeuroJSON database registry

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 20, 2026Jan 20, 2026

• BlenderPhotonics

  Public
  BlenderPhotonics is a Blender addon to perform 3D mesh generation and Monte Carlo simulations using Iso2Mesh and MMCLAB

  Python

  •

  Other

  •88 forks•2828 stars•11 issue•00 pull requests•Updated Sep 24, 2025Sep 24, 2025

• jmesh

  Public
  JMesh - A portable and versatile JSON data format for storage of unstructured mesh and shape data

  MATLAB

  •

  Apache License 2.0

  •77 forks•66 stars•00 issues•00 pull requests•Updated Aug 24, 2025Aug 24, 2025

• jsnirf

  Public
  A JSON/binary JSON extension to the SNIRF format

  jsondataformat+ 8

  jsondataformatscientific-computinghdf5neuroimagingbraindata-formatsnirfbinary-json+ 1

  66 forks•33 stars•00 issues•00 pull requests•Updated Aug 24, 2025Aug 24, 2025

• jsnirfy

  Public
  JSNIRF Toolbox

  MATLAB

  •

  Other

  •33 forks•33 stars•00 issues•00 pull requests•Updated Apr 18, 2025Apr 18, 2025

• jbids

  Public
  MATLAB

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 15, 2025Apr 15, 2025

• easyh5

  Public
  EasyH5 Toolbox - An easy-to-use HDF5 data interface (loadh5 and saveh5) for MATLAB

  MATLAB

  •

  BSD 3-Clause "New" or "Revised" License

  •1010 forks•1616 stars•00 issues•00 pull requests•Updated Apr 13, 2025Apr 13, 2025

• jsus

  Public
  jsus - JSON-Schema User Survey

  BSD 3-Clause "New" or "Revised" License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 31, 2025Mar 31, 2025

• ubj

  Public
  UBJSON C/C++ libraries

  C

  •

  MIT License

  •1212 forks•00 stars•00 issues•00 pull requests•Updated Mar 24, 2025Mar 24, 2025

• SFTP-Deploy-Action

  Public
  Deploy files to server use GitHub actions & SFTP

  Shell

  •8080 forks•00 stars•00 issues•00 pull requests•Updated Mar 10, 2025Mar 10, 2025

• dataset_description_fnirs

  Public
  Extended fNIRS header for BIDS dataset_description.json

  Creative Commons Zero v1.0 Universal

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 6, 2024Nov 6, 2024

• .github

  Public
  NeuroJSON Roadmap

  00 forks•11 star•00 issues•00 pull requests•Updated Apr 23, 2024Apr 23, 2024

• dust3r

  Public
  Python

  •

  Other

  •753753 forks•00 stars•00 issues•00 pull requests•Updated Mar 3, 2024Mar 3, 2024

• jsdata

  Public
  JData encoder and decoder for JavaScript

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •44 forks•44 stars•00 issues•00 pull requests•Updated Feb 11, 2024Feb 11, 2024

• JMeshSamples

  Public
  Sample files for JMesh based mesh data

  Shell

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 29, 2023Jun 29, 2023