diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 0000000..c1a1ec7 --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,26 @@ +cff-version: 1.2.0 +message: "If you use this software, please cite the associated article." +title: "Hotgenes: an R package for reducing bottlenecks in bulk omics data exploration and collaboration" +authors: + - family-names: Virgen-Slane + given-names: Richard + orcid: "https://orcid.org/0000-0002-0011-3844" + email: Richard.Virgen-Slane@pfizer.com +type: article +journal: "Bioinformatics" +year: 2026 +identifiers: + - type: doi + value: 10.1093/bioinformatics/btag434 +preferred-citation: + type: article + title: "Hotgenes: an R package for reducing bottlenecks in bulk omics data exploration and collaboration" + authors: + - family-names: Virgen-Slane + given-names: Richard + orcid: "https://orcid.org/0000-0002-0011-3844" + journal: "Bioinformatics" + year: 2026 + pages: btag434 + doi: 10.1093/bioinformatics/btag434 + url: "https://doi.org/10.1093/bioinformatics/btag434" diff --git a/DESCRIPTION b/DESCRIPTION index 8173e59..26b65ed 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: Hotgenes Type: Package Title: Tools to simplify Omics DE Analysis -Version: 0.0.56 +Version: 0.99.0 Authors@R: person( given = "Richard", family = "Virgen-Slane", @@ -14,8 +14,11 @@ Description: Converts outputs from DESeq2, DRomics, limma, or a method of your hierarchical clustering on principal components. License: Apache License (>= 2) | file LICENSE Encoding: UTF-8 -LazyData: true RoxygenNote: 7.3.3 +URL: https://github.com/pfizer-opensource/Open-Hotgenes +BugReports: https://github.com/pfizer-opensource/Open-Hotgenes/issues +biocViews: Software, GeneExpression, DifferentialExpression, RNASeq, + Transcriptomics, PrincipalComponent, Clustering, Visualization, Shiny Imports: cli, factoextra, diff --git a/inst/CITATION b/inst/CITATION new file mode 100644 index 0000000..4691975 --- /dev/null +++ b/inst/CITATION @@ -0,0 +1,12 @@ +bibentry( + bibtype = "Article", + title = "Hotgenes: an R package for reducing bottlenecks in bulk omics data exploration and collaboration", + author = person("Richard", "Virgen-Slane", + email = "Richard.Virgen-Slane@pfizer.com", + comment = c(ORCID = "0000-0002-0011-3844")), + journal = "Bioinformatics", + year = "2026", + pages = "btag434", + doi = "10.1093/bioinformatics/btag434", + url = "https://doi.org/10.1093/bioinformatics/btag434" +)