R-CMD-check

fix: address various check/test/CI issues (#2441) #497

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Run time

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Job	Run time
ubuntu-latest (release)	11m 32s
ubuntu-latest (devel)	32m 51s
ubuntu-latest (oldrel-3)	9m 12s
ubuntu-latest (oldrel-2)	8m 52s
macOS-latest (release)	4m 6s
windows-latest (release)	6m 11s
ubuntu-latest (oldrel-1)	10m 6s
	1h 22m 50s