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1 parent 7f6d6b5 commit 987d224Copy full SHA for 987d224
1 file changed
lib/preprocess.py
@@ -92,7 +92,7 @@ def preprocessing(imgPath, maskPath):
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if debug:
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outPrefix= imgPath.split('.nii')[0]+suffix
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save_nifti(outPrefix+'.nii.gz', lowResImg, lowRes.affine, lowResImgHdr)
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- shutil.copyfile(niiinPrefix + '.bvec', outPrefix + '.bvec')
+ shutil.copyfile(inPrefix + '.bvec', outPrefix + '.bvec')
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write_bvals(outPrefix + '.bval', bvals)
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dti_harm(outPrefix+'.nii.gz', maskPath)
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