Hello,
First of all, thank you for developing and maintaining the PR2 primer database, it's really useful!
Could you please include the following primer pair (targeting eukaryotic V4 SSU) in the database?
- Euk575F
ASCYGYGGTAAYWCCAGC
- Euk895R
TCHNHGNATTTCACCNCT
These primers are currently used in the EU soil monitoring framework (LUCAS Soil survey) and would be a useful addition for studies working on soil eukaryotes, especially for European large-scale monitoring datasets.
Examples of studies using this primer pair:
-
Köninger J, Ballabio C, Panagos P, Jones A, Schmid MW, Orgiazzi A, Briones MJI. 2023. Ecosystem type drives soil eukaryotic diversity and composition in Europe. Global Change Biology 29:5706-5719. DOI: 10.1111/gcb.16871
-
Aslani F, Bahram M, Geisen S, Pent M, Otsing E, Tamm H, Jones A, Panagos P, Köninger J, Orgiazzi A, Tedersoo L. 2024. Land use intensification homogenizes soil protist communities and alters their diversity across Europe. Soil Biology and Biochemistry 195:109459. DOI: 10.1016/j.soilbio.2024.109459
With kind regards,
Vladimir
Hello,
First of all, thank you for developing and maintaining the PR2 primer database, it's really useful!
Could you please include the following primer pair (targeting eukaryotic V4 SSU) in the database?
ASCYGYGGTAAYWCCAGCTCHNHGNATTTCACCNCTThese primers are currently used in the EU soil monitoring framework (LUCAS Soil survey) and would be a useful addition for studies working on soil eukaryotes, especially for European large-scale monitoring datasets.
Examples of studies using this primer pair:
Köninger J, Ballabio C, Panagos P, Jones A, Schmid MW, Orgiazzi A, Briones MJI. 2023. Ecosystem type drives soil eukaryotic diversity and composition in Europe. Global Change Biology 29:5706-5719. DOI: 10.1111/gcb.16871
Aslani F, Bahram M, Geisen S, Pent M, Otsing E, Tamm H, Jones A, Panagos P, Köninger J, Orgiazzi A, Tedersoo L. 2024. Land use intensification homogenizes soil protist communities and alters their diversity across Europe. Soil Biology and Biochemistry 195:109459. DOI: 10.1016/j.soilbio.2024.109459
With kind regards,
Vladimir