micro-manager/.github/workflows/run-adaptivity-tests-parallel.yml at develop · precice/micro-manager · GitHub

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name: Test adaptivity functionality in parallel
on:
  push:
    branches:
      - main
      - develop
  pull_request:
    branches:
      - "*"
jobs:
  integration_tests:
    name: Integration tests
    runs-on: ubuntu-latest
    container: precice/precice:nightly
    steps:
      - name: Checkout repository
        uses: actions/checkout@v6
        with:
          path: micro-manager

      - name: Install sudo for MPI
        working-directory: micro-manager
        run: |
          apt-get -qq update
          apt-get -qq install sudo

      - name: Use mpi4py
        uses: mpi4py/setup-mpi@v1

      - name: Install dependencies
        working-directory: micro-manager
        run: |
          apt-get -qq update
          apt-get -qq install python3-dev git python3-venv pkg-config

      - name: Create a virtual environment and install Micro Manager in it
        working-directory: micro-manager
        run: |
          python3 -m venv .venv
          . .venv/bin/activate
          pip install .

      - name: Run integration test with global adaptivity in parallel
        timeout-minutes: 3
        working-directory: micro-manager
        run: |
          . .venv/bin/activate
          cd tests/integration/test_unit_cube/
          mpiexec -n 2 --allow-run-as-root micro-manager-precice micro-manager-config-global-adaptivity-parallel.json &
          python3 unit_cube.py 2

  unit_tests:
    name: Unit tests
    runs-on: ubuntu-latest
    container: precice/precice:nightly
    steps:
      - name: Checkout Repository
        uses: actions/checkout@v6
        with:
          path: micro-manager

      - name: Load Cache OpenMPI 5
        id: ompi-cache-load
        uses: actions/cache/restore@v5
        with:
          path: ~/openmpi
          key: openmpi-v5-${{ runner.os }}-build
          # If this fails, cache gets built in run-unit-tests

      - name: Configure OpenMPI
        run: |
          cp -r ~/openmpi/* /usr/local/
          ldconfig
          which mpiexec
          mpiexec --version

      - name: Install Dependencies
        working-directory: micro-manager
        run: |
          apt-get -qq update
          apt-get -qq install python3-dev python3-venv git pkg-config

      - name: Create a virtual environment and install Micro Manager in it
        working-directory: micro-manager
        run: |
          python3 -m venv .venv
          . .venv/bin/activate
          pip install .

      - name: Run unit tests
        working-directory: micro-manager
        run: |
          . .venv/bin/activate
          cd tests/unit
          mpiexec -n 2 --allow-run-as-root python3 -m unittest test_adaptivity_parallel.py

      - name: Run load balancing unit tests with 2 ranks
        timeout-minutes: 3
        working-directory: micro-manager
        run: |
          . .venv/bin/activate
          cd tests/unit
          mpiexec -n 2 --allow-run-as-root python3 -m unittest test_load_balancing.py

      - name: Run load balancing unit tests with 4 ranks
        timeout-minutes: 3
        working-directory: micro-manager
        run: |
          . .venv/bin/activate
          cd tests/unit
          mpiexec -n 4 --oversubscribe --allow-run-as-root python3 -m unittest test_load_balancing.py