diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index 9bd678a8..afb396a1 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -20,7 +20,7 @@ jobs:
         uses: actions/checkout@v4
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@v6
         with:
           python-version: "3.12"
 
@@ -35,7 +35,7 @@ jobs:
         run: uv sync --all-groups
 
       - name: Run tests
-        run: pytest
+        run: uv run pytest
         env:
           COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_1: ${{ secrets.COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_1 }}
           COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_2: ${{ secrets.COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_2 }}
diff --git a/.github/workflows/e2e-external-phase-2.yml b/.github/workflows/e2e-external-phase-2.yml
index 7b68e862..9a721ff5 100644
--- a/.github/workflows/e2e-external-phase-2.yml
+++ b/.github/workflows/e2e-external-phase-2.yml
@@ -89,7 +89,7 @@ jobs:
           ref: ${{ steps.extract_commit.outputs.COMMIT_ID }}
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v5
+        uses: astral-sh/setup-uv@v6
         with:
           python-version: "3.12"
 
@@ -104,7 +104,7 @@ jobs:
         run: uv sync --all-groups
 
       - name: Run end-to-end tests
-        run: pytest tests/end_to_end
+        run: uv run pytest tests/end_to_end
         env:
           COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_1: ${{ secrets.COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_1 }}
           COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_2: ${{ secrets.COVERAGE_COMMENT_E2E_GITHUB_TOKEN_USER_2 }}