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dsigma #312

@johannesulf

Description

@johannesulf

Submitting Author: @johannesulf
All current maintainers: @johannesulf, @dr-guangtou
Package Name: dsigma
One-Line Description of Package: a user-friendly galaxy–galaxy lensing package
Repository Link: https://github.com/johannesulf/dsigma
Version submitted: 1.2.0
EiC: TBD
Editor: TBD
Reviewer 1: TBD
Reviewer 2: TBD
Archive: TBD
JOSS DOI: TBD
Version accepted: TBD
Date accepted (month/day/year): TBD


Code of Conduct & Commitment to Maintain Package

Description

dsigma is an easy-to-use Python package for measuring gravitational galaxy-galaxy lensing. Using a lensing catalog, it estimates excess surface density around a population of lenses, such as galaxies in the Sloan Digital Sky Survey or the Baryon Oscillation Spectroscopic Survey. It has a flexible API and can utilize data from, DECADE, the Dark Energy Survey (DES), the Kilo-Degree Survey (KiDS), and the Hyper Suprime-Cam (HSC) lensing surveys, among others. With core computations written in C, dsigma is very fast. Additionally, dsigma provides out-of-the-box support for estimating covariances with jackknife resampling and calculating various summary statistics.

Scope

  • Please indicate which category or categories.
    Check out our package scope page to learn more about our
    scope. (If you are unsure of which category you fit, we suggest you make a pre-submission inquiry):

    • Data retrieval
    • Data extraction
    • Data processing/munging
    • Data deposition
    • Data validation and testing
    • Data visualization1
    • Workflow automation
    • Citation management and bibliometrics
    • Scientific software wrappers
    • Database interoperability

Domain Specific

  • Geospatial
  • Education

Community Partnerships

If your package is associated with an
existing community please check below:

  • For all submissions, explain how and why the package falls under the categories you indicated above. In your explanation, please address the following points (briefly, 1-2 sentences for each):

In cosmology, there are several publicly available weak gravitational lensing data sets. dsigma makes it easy to measure the so-called galaxy–galaxy lensing effect from that data. While other packages exist for measuring galaxy–galaxy lensing, they typically compute $\gamma_{\mathrm{t}} (\theta)$, an angular quantity, instead of $\Delta\Sigma (r_\mathrm{p})$, a physical quantity. The latter requires additional complexity by taking into account redshifts and cosmological parameters. Additionally, dsigma includes survey-specific correction factors out-of-the-box. dsigma is a one-stop solution to compute $\Delta\Sigma (r_\mathrm{p})$ with a variety of publicly available data sets, including relevant correction factors, enabling astrophysicists to make use of those data sets with minimal effort.

Technical checks

For details about the pyOpenSci packaging requirements, see our packaging guide. Confirm each of the following by checking the box. This package:

  • does not violate the Terms of Service of any service it interacts with.
  • uses an OSI approved license.
  • contains a README with instructions for installing the development version.
  • includes documentation with examples for all functions.
  • contains a tutorial with examples of its essential functions and uses.
  • has a test suite.
  • has continuous integration setup, such as GitHub Actions CircleCI, and/or others.

Publication Options

JOSS Checks
  • The package has an obvious research application according to JOSS's definition in their submission requirements. Be aware that completing the pyOpenSci review process does not guarantee acceptance to JOSS. Be sure to read their submission requirements (linked above) if you are interested in submitting to JOSS.
  • The package is not a "minor utility" as defined by JOSS's submission requirements: "Minor ‘utility’ packages, including ‘thin’ API clients, are not acceptable." pyOpenSci welcomes these packages under "Data Retrieval", but JOSS has slightly different criteria.
  • The package contains a paper.md matching JOSS's requirements with a high-level description in the package root or in inst/ by the time you wish to submit to JOSS.
  • The package is deposited in a long-term repository with the DOI: 10.5281/zenodo.20378642

Note: JOSS accepts our review as theirs. You will NOT need to go through another full review. JOSS will only review your paper.md file. Be sure to link to this pyOpenSci issue when a JOSS issue is opened for your package. Also be sure to tell the JOSS editor that this is a pyOpenSci reviewed package once you reach this step. Please note that the PyOpenSci reviewers will not be reviewing the paper.md file

Are you OK with Reviewers Submitting Issues and/or pull requests to your Repo Directly?

This option will allow reviewers to open smaller issues that can then be linked to PR's rather than submitting a more dense text based review. It will also allow you to demonstrate addressing the issue via PR links.

  • Yes I am OK with reviewers submitting requested changes as issues to my repo. Reviewers will then link to the issues in their submitted review.

Confirm each of the following by checking the box.

  • I have read the author guide.
  • I expect to maintain this package for at least 2 years and can help find a replacement for the maintainer (team) if needed.

Please fill out our survey

P.S. Have feedback/comments about our review process? Leave a comment on our GitHub Discussions

Editor and Review Templates

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The review template can be found here.

Footnotes

  1. Please fill out a pre-submission inquiry before submitting a data visualization package.

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