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Copy pathtest_single_plot_dependency.py
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329 lines (296 loc) · 11.5 KB
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import os
import unittest
from time import sleep
from executorlib import (
SingleNodeExecutor,
SlurmJobExecutor,
SlurmClusterExecutor,
split_future,
get_item_from_future,
)
from executorlib.task_scheduler.interactive.dependency_plot import generate_nodes_and_edges_for_plotting
from executorlib.standalone.serialize import cloudpickle_register
try:
import pygraphviz
skip_graphviz_test = False
except ImportError:
skip_graphviz_test = True
def add_function(parameter_1, parameter_2):
sleep(0.2)
return parameter_1 + parameter_2
def generate_tasks(length):
sleep(0.2)
return range(length)
def calc_from_lst(lst, ind, parameter):
sleep(0.2)
return lst[ind] + parameter
def merge(lst):
sleep(0.2)
return sum(lst)
def return_input_dict(input_dict):
return input_dict
def get_tuple(i):
return 1, 2, i
def get_dict(i):
return {"a": 1, "b": i}
def echo(i):
return i
@unittest.skipIf(
skip_graphviz_test,
"graphviz is not installed, so the plot_dependency_graph tests are skipped.",
)
class TestLocalExecutorWithDependencies(unittest.TestCase):
def test_executor_dependency_plot(self):
with SingleNodeExecutor(
max_cores=1,
plot_dependency_graph=True,
block_allocation=True,
) as exe:
cloudpickle_register(ind=1)
future_1 = exe.submit(add_function, 1, parameter_2=2)
future_2 = exe.submit(add_function, 1, parameter_2=future_1)
self.assertTrue(future_1.done())
self.assertTrue(future_2.done())
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 2)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 2)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 4)
self.assertEqual(len(edges), 4)
def test_executor_dependency_plot_filename(self):
graph_file = os.path.join(os.path.dirname(__file__), "test.png")
with SingleNodeExecutor(
max_cores=1,
block_allocation=False,
plot_dependency_graph=False,
plot_dependency_graph_filename=graph_file,
) as exe:
cloudpickle_register(ind=1)
future_1 = exe.submit(add_function, 1, parameter_2=2)
future_2 = exe.submit(add_function, 1, parameter_2=future_1)
self.assertTrue(future_1.done())
self.assertTrue(future_2.done())
self.assertTrue(os.path.exists(graph_file))
os.remove(graph_file)
def test_many_to_one_plot(self):
length = 5
parameter = 1
with SingleNodeExecutor(
max_cores=2,
block_allocation=False,
plot_dependency_graph=True,
) as exe:
cloudpickle_register(ind=1)
future_lst = exe.submit(
generate_tasks,
length=length,
resource_dict={"cores": 1},
)
lst = []
for i in range(length):
lst.append(
exe.submit(
calc_from_lst,
lst=future_lst,
ind=i,
parameter=parameter,
resource_dict={"cores": 1},
)
)
future_sum = exe.submit(
merge,
lst=lst,
resource_dict={"cores": 1},
)
self.assertTrue(future_lst.done())
for l in lst:
self.assertTrue(l.done())
self.assertTrue(future_sum.done())
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 7)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 7)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 14)
self.assertEqual(len(edges), 22)
def test_future_input_dict(self):
with SingleNodeExecutor(plot_dependency_graph=True) as exe:
exe.submit(
return_input_dict,
input_dict={"a": exe.submit(sum, [2, 2])},
)
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 2)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 2)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 4)
self.assertEqual(len(edges), 3)
@unittest.skipIf(
skip_graphviz_test,
"graphviz is not installed, so the plot_dependency_graph tests are skipped.",
)
class TestSlurmAllocationExecutorWithDependencies(unittest.TestCase):
def test_executor_dependency_plot(self):
with SlurmJobExecutor(
max_cores=1,
block_allocation=False,
plot_dependency_graph=True,
) as exe:
cloudpickle_register(ind=1)
future_1 = exe.submit(add_function, 1, parameter_2=2)
future_2 = exe.submit(add_function, 1, parameter_2=future_1)
self.assertTrue(future_1.done())
self.assertTrue(future_2.done())
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 2)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 2)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 4)
self.assertEqual(len(edges), 4)
def test_many_to_one_plot(self):
length = 5
parameter = 1
with SlurmJobExecutor(
max_cores=2,
block_allocation=False,
plot_dependency_graph=True,
) as exe:
cloudpickle_register(ind=1)
future_lst = exe.submit(
generate_tasks,
length=length,
resource_dict={"cores": 1},
)
lst = []
for i in range(length):
lst.append(
exe.submit(
calc_from_lst,
lst=future_lst,
ind=i,
parameter=parameter,
resource_dict={"cores": 1},
)
)
future_sum = exe.submit(
merge,
lst=lst,
resource_dict={"cores": 1},
)
self.assertTrue(future_lst.done())
for l in lst:
self.assertTrue(l.done())
self.assertTrue(future_sum.done())
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 7)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 7)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 14)
self.assertEqual(len(edges), 22)
@unittest.skipIf(
skip_graphviz_test,
"graphviz is not installed, so the plot_dependency_graph tests are skipped.",
)
class TestSlurmSubmissionExecutorWithDependencies(unittest.TestCase):
def test_executor_dependency_plot(self):
with SlurmClusterExecutor(
plot_dependency_graph=True,
) as exe:
cloudpickle_register(ind=1)
future_1 = exe.submit(add_function, 1, parameter_2=2)
future_2 = exe.submit(add_function, 1, parameter_2=future_1)
self.assertTrue(future_1.done())
self.assertTrue(future_2.done())
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 2)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 2)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 4)
self.assertEqual(len(edges), 4)
def test_many_to_one_plot(self):
length = 5
parameter = 1
with SlurmClusterExecutor(
plot_dependency_graph=True,
) as exe:
cloudpickle_register(ind=1)
future_lst = exe.submit(
generate_tasks,
length=length,
resource_dict={"cores": 1},
)
lst = []
for i in range(length):
lst.append(
exe.submit(
calc_from_lst,
lst=future_lst,
ind=i,
parameter=parameter,
resource_dict={"cores": 1},
)
)
future_sum = exe.submit(
merge,
lst=lst,
resource_dict={"cores": 1},
)
self.assertTrue(future_lst.done())
for l in lst:
self.assertTrue(l.done())
self.assertTrue(future_sum.done())
self.assertEqual(len(exe._task_scheduler._future_hash_dict), 7)
self.assertEqual(len(exe._task_scheduler._task_hash_dict), 7)
nodes, edges = generate_nodes_and_edges_for_plotting(
task_hash_dict=exe._task_scheduler._task_hash_dict,
future_hash_inverse_dict={
v: k for k, v in exe._task_scheduler._future_hash_dict.items()
},
)
self.assertEqual(len(nodes), 14)
self.assertEqual(len(edges), 22)
@unittest.skipIf(
skip_graphviz_test,
"graphviz is not installed, so the plot_dependency_graph tests are skipped.",
)
class TestSelectExecutorPlot(unittest.TestCase):
def test_split_future(self):
with SingleNodeExecutor(plot_dependency_graph=True) as exe:
f = exe.submit(get_tuple, 5)
f1, f2, f3 = split_future(future=f, n=3)
f12 = exe.submit(echo, f1)
f22 = exe.submit(echo, f2)
f32 = exe.submit(echo, f3)
self.assertIsNone(f12.result())
self.assertIsNone(f22.result())
self.assertIsNone(f32.result())
def test_get_item_from_future(self):
with SingleNodeExecutor(plot_dependency_graph=True) as exe:
f = exe.submit(get_dict, 5)
f1 = exe.submit(echo, get_item_from_future(future=f, key="a"))
f2 = exe.submit(echo, get_item_from_future(future=f, key="b"))
self.assertIsNone(f1.result())
self.assertIsNone(f2.result())