Better ruff rules

[kingbuzzman]

Adds all the ruff rules.

Added all the issues under TODO to fix in another PR

[Copilot]

Pull Request Overview

This PR significantly expands the Ruff linting configuration by adding comprehensive rule sets covering security, performance, documentation, and code quality checks. The purpose is to enforce better code standards across the project while acknowledging that many existing violations will need to be addressed in future PRs.

• Replaces selective rule enabling (extend-select) with comprehensive rule coverage (select) including 40+ rule categories
• Adds extensive ignore lists for both general code and test files to handle existing violations
• Introduces per-file ignore patterns for test directories to allow more lenient standards in test code

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