[Task] Integration Test — Register Immunopeptidomics Measurements

[sven1103-agent]

Parent Story

#1428

Requirement IDs

MEASUREMENT-R-01

Description

Write and verify the Story-level integration test for immunopeptidomics measurement registration. The test validates that the implementation Task (#1413) satisfies all acceptance criteria defined in Story #1428. Any failing ACs discovered during this Task are reported as new follow-up Tasks.

The IT belongs in project-management/src/test/groovy/.../measurement/ and runs under the Maven it profile (Spring Boot test slice or @SpringBootTest). It targets the application service layer (MeasurementService and related parsers) to avoid mocking internals.

Acceptance Criteria (from parent Story)

• Given a user is on the measurement registration page, When they select the immunopeptidomics domain, Then a downloadable registration template with the correct columns and Property Information sheet is provided.
• Given a user uploads a filled immunopeptidomics registration template with all mandatory fields valid, When the system validates the sheet, Then all measurements are registered successfully with unique IP- prefixed measurement codes.
• Given a user uploads a sheet with a missing mandatory field (e.g., blank MHC Antibody), When the system validates the sheet, Then an error identifying the column and row is returned and no records are created.
• Given a user uploads a sheet with an invalid Organisation URL or Prep Date format, When validation runs, Then a domain-appropriate error is returned and no records are created.
• Given a user uploads a sheet with a non-existent or cross-experiment QBiC Sample Id, When validation runs, Then a missing/unknown-id error is returned and no records are created.
• Given a user uploads a sheet with all optional fields blank and all mandatory fields valid, When the system processes the sheet, Then measurements are created successfully.

Technical Notes

• Test data: use the provided immunopeptidomics registration templates with valid and invalid rows.
• Assertions must cover: IP- prefix code generation, validation rejections (missing mandatory, invalid format, unknown sample), and successful creation with optional fields blank.
• The test must pass with ./mvnw clean verify -Pit before this Task is considered complete.
• If any AC fails, create new Task(s) referencing this one and the parent Story; do not workaround in this branch.
• The OpenBIS object type for immunopeptidomics must be available in the test environment (or mocked).

[sven1103-agent]

Superseded — skipped for this feature.

The immunopeptidomics measurement integration test requires comprehensive end-to-end verification across registration, editing, deletion, and view layers — involving OpenBIS integration and complex validation scenarios. Given the scope and complexity, the team has decided to skip dedicated IT tasks for this feature cycle.

The underlying implementation Tasks (#1413–#1417) have been merged and validated through normal development/CI pipeline testing.